| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At4G30930.1 |
score: 188 |
e-value: 6e-48 |
Identity: 80% |
Span: 450bp (33.6%) |
Frame: 2 |
| Symbols: NFD1 | NFD1 (NUCLEAR FUSION DEFECTIVE 1); structural constituent of ribosome | chr4:15050176-15051636 REVERSE |
| Match: At1G35680.1 |
score: 76.6 |
e-value: 3e-14 |
Identity: 42.55% |
Span: 423bp (31.5%) |
Frame: 2 |
| 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | chr1:13209989-13211458 FORWARD |
|
| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|18417696|ref|NP_567861.1| |
score: 188 |
e-value: 4e-46 |
Identity: 80% |
Span: 450bp (33.6%) |
Frame: 2 |
| NFD1 (NUCLEAR FUSION DEFECTIVE 1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi2983955... |
| Match: gi|7269995|emb|CAB79811.1| |
score: 188 |
e-value: 4e-46 |
Identity: 80% |
Span: 450bp (33.6%) |
Frame: 2 |
| gi|7269995|emb|CAB79811.1| putative protein [Arabidopsis thaliana] >gi|2980773|emb|CAA18200.1| putative protein [Arab... |
| Match: gi|50932753|ref|XP_475904.1| |
score: 186 |
e-value: 3e-45 |
Identity: 55.29% |
Span: 747bp (55.7%) |
Frame: 2 |
| gi|50932753|ref|XP_475904.1| putative ribosomal protein L21 [Oryza sativa (japonica cultivar-group)] >gi|50878314|gb|... |
| Match: gi|21315|emb|CAA40019.1| |
score: 79 |
e-value: 5e-13 |
Identity: 54.55% |
Span: 330bp (24.6%) |
Frame: 2 |
| gi|21315|emb|CAA40019.1| L21 r-protein [Spinacia oleracea] >gi|477106|pir||A48103 ribosomal protein L21 precursor, ch... |
| Match: gi|15219695|ref|NP_174808.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 42.55% |
Span: 423bp (31.5%) |
Frame: 2 |
| 50S ribosomal protein L21, chloroplast / CL21 (RPL21) [Arabidopsis thaliana] >gi1710424|sp|P51412.1|RK21_ARATH RecNam... |
| Match: gi|50906793|ref|XP_464885.1| |
score: 72 |
e-value: 6e-11 |
Identity: 50.43% |
Span: 345bp (25.7%) |
Frame: 2 |
| gi|50906793|ref|XP_464885.1| putative 50S ribosomal protein L21, chloroplast [Oryza sativa (japonica cultivar-group)]... |
| Match: gi|77920176|ref|YP_357991.1| |
score: 58.2 |
e-value: 9e-07 |
Identity: 46.6% |
Span: 309bp (23.0%) |
Frame: 2 |
| ribosomal |
| Match: gi|23016098|ref|ZP_00055858.1| |
score: 57 |
e-value: 2e-06 |
Identity: 50% |
Span: 306bp (22.8%) |
Frame: 2 |
| gi|23016098|ref|ZP_00055858.1| COG0261: Ribosomal protein L21 [Magnetospirillum magnetotacticum] |
| Match: gi|95931025|ref|ZP_01313753.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 46.6% |
Span: 309bp (23.0%) |
Frame: 2 |
| ribosomal |
| Match: gi|83313176|ref|YP_423440.1| |
score: 55.5 |
e-value: 6e-06 |
Identity: 50% |
Span: 306bp (22.8%) |
Frame: 2 |
| Ribosomal |
| Match: gi|15024184|gb|AAK79228.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 46.6% |
Span: 309bp (23.0%) |
Frame: 2 |
| Ribosomal |
| Match: gi|82501055|ref|ZP_00886433.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 42.16% |
Span: 306bp (22.8%) |
Frame: 2 |
| Ribosomal |
| Match: gi|78195641|gb|ABB33408.1| |
score: 53.1 |
e-value: 3e-05 |
Identity: 43.27% |
Span: 312bp (23.3%) |
Frame: 2 |
| ribosomal |
| Match: gi|66805611|ref|XP_636527.1| |
score: 52.8 |
e-value: 4e-05 |
Identity: 42.59% |
Span: 162bp (12.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|62857501|ref|NP_001016810.1| |
score: 52.8 |
e-value: 4e-05 |
Identity: 44.83% |
Span: 174bp (13.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|91218753|ref|ZP_01255633.1| |
score: 52.4 |
e-value: 5e-05 |
Identity: 43.14% |
Span: 306bp (22.8%) |
Frame: 2 |
| 50S |
| Match: gi|42519428|ref|NP_965358.1| |
score: 52.4 |
e-value: 5e-05 |
Identity: 41.75% |
Span: 309bp (23.0%) |
Frame: 2 |
| gi|42519428|ref|NP_965358.1| 50S ribosomal protein L21 [Lactobacillus johnsonii NCC 533] >gi|41583716|gb|AAS09324.1| ... |
| Match: gi|83589421|ref|YP_429430.1| |
score: 52.4 |
e-value: 5e-05 |
Identity: 42.72% |
Span: 309bp (23.0%) |
Frame: 2 |
| ribosomal |
| Match: gi|65304473|emb|CAI76852.1| |
score: 52 |
e-value: 6e-05 |
Identity: 40.86% |
Span: 279bp (20.8%) |
Frame: 2 |
| 50S |
| Match: gi|91069765|gb|ABE05487.1| |
score: 51.6 |
e-value: 8e-05 |
Identity: 46.6% |
Span: 306bp (22.8%) |
Frame: 2 |
| 50S |
| Match: gi|83371252|ref|ZP_00916069.1| |
score: 51.6 |
e-value: 8e-05 |
Identity: 42.31% |
Span: 309bp (23.0%) |
Frame: 2 |
| Ribosomal |
| Match: gi|39985272|gb|AAR36627.1| |
score: 51.6 |
e-value: 8e-05 |
Identity: 46.08% |
Span: 306bp (22.8%) |
Frame: 2 |
| ribosomal |
| Match: gi|68125293|emb|CAJ03050.1| |
score: 51.2 |
e-value: 0.0001 |
Identity: 44.64% |
Span: 168bp (12.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|55234635|gb|EAL38786.1| |
score: 51.2 |
e-value: 0.0001 |
Identity: 49.09% |
Span: 165bp (12.3%) |
Frame: 2 |
| ENSANGP00000008642 |
| Match: gi|62176570|gb|AAX70675.1| |
score: 51.2 |
e-value: 0.0001 |
Identity: 46.43% |
Span: 168bp (12.5%) |
Frame: 2 |
| hypothetical |
|
| 129 lower scoring hits censored -- only 25 best hits are stored. |
