| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At5G09380.1 |
score: 169 |
e-value: 4e-42 |
Identity: 33.8% |
Span: 1056bp (78.0%) |
Frame: 2 |
| DNA-directed RNA polymerase III RPC4 family protein | chr5:2911314-2913137 REVERSE |
| Match: At4G25180.1 |
score: 112 |
e-value: 7e-25 |
Identity: 34.65% |
Span: 579bp (42.8%) |
Frame: 2 |
| DNA-directed RNA polymerase | chr4:12911756-12913917 REVERSE |
| Match: At4G25180.1 |
score: 78.6 |
e-value: 8e-15 |
Identity: 56.72% |
Span: 201bp (14.8%) |
Frame: 2 |
| DNA-directed RNA polymerase | chr4:12911756-12913917 REVERSE |
|
| genbank/nr [blastx] | Showing best 37 hits recorded |
| Match: gi|15242400|ref|NP_196500.1| |
score: 169 |
e-value: 3e-40 |
Identity: 33.8% |
Span: 1056bp (78.0%) |
Frame: 2 |
| DNA-directed RNA polymerase III RPC4 family protein [Arabidopsis thaliana] >gi9955525|emb|CAC05464.1| putative protei... |
| Match: gi|50923907|ref|XP_472314.1| |
score: 169 |
e-value: 3e-40 |
Identity: 46.61% |
Span: 705bp (52.1%) |
Frame: 2 |
| gi|50923907|ref|XP_472314.1| OSJNBa0072K14.7 [Oryza sativa (japonica cultivar-group)] >gi|21740741|emb|CAD40550.1| OS... |
| Match: gi|52218818|gb|AAU29479.1| |
score: 112 |
e-value: 5e-23 |
Identity: 34.65% |
Span: 579bp (42.8%) |
Frame: 2 |
| gi|52218818|gb|AAU29479.1| At4g25180 [Arabidopsis thaliana] >gi|48596987|gb|AAT46034.1| At4g25180 [Arabidopsis thalia... |
| Match: gi|34907504|ref|NP_915099.1| |
score: 97.4 |
e-value: 1e-18 |
Identity: 63.89% |
Span: 213bp (15.7%) |
Frame: 2 |
| gi|34907504|ref|NP_915099.1| B1099D03.22 [Oryza sativa (japonica cultivar-group)] gi|20804968|dbj|BAB92645.1| B1099D0... |
| Match: gi|7269368|emb|CAB79427.1| |
score: 87.4 |
e-value: 1e-15 |
Identity: 43.88% |
Span: 276bp (20.4%) |
Frame: 2 |
| gi|7269368|emb|CAB79427.1| hypothetical protein [Arabidopsis thaliana] >gi|4454006|emb|CAA23059.1| hypothetical prote... |
| Match: gi|52218818|gb|AAU29479.1| |
score: 78.6 |
e-value: 6e-13 |
Identity: 56.72% |
Span: 201bp (14.8%) |
Frame: 2 |
| gi|52218818|gb|AAU29479.1| At4g25180 [Arabidopsis thaliana] >gi|48596987|gb|AAT46034.1| At4g25180 [Arabidopsis thalia... |
| Match: gi|7269368|emb|CAB79427.1| |
score: 64.7 |
e-value: 1e-08 |
Identity: 41.3% |
Span: 201bp (14.8%) |
Frame: 2 |
| gi|7269368|emb|CAB79427.1| hypothetical protein [Arabidopsis thaliana] >gi|4454006|emb|CAA23059.1| hypothetical prote... |
| Match: gi|50555065|ref|XP_504941.1| |
score: 63.5 |
e-value: 2e-08 |
Identity: 39.44% |
Span: 213bp (15.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|68063925|ref|XP_673957.1| |
score: 62.4 |
e-value: 5e-08 |
Identity: 28.57% |
Span: 273bp (20.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|57226983|gb|AAW43442.1| |
score: 62.4 |
e-value: 5e-08 |
Identity: 42.25% |
Span: 210bp (15.5%) |
Frame: 2 |
| conserved |
| Match: gi|50257977|gb|EAL20671.1| |
score: 62.4 |
e-value: 5e-08 |
Identity: 42.25% |
Span: 210bp (15.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|68075141|ref|XP_679487.1| |
score: 62.4 |
e-value: 5e-08 |
Identity: 28.57% |
Span: 273bp (20.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|23497677|gb|AAN37216.1| |
score: 60.5 |
e-value: 2e-07 |
Identity: 28.57% |
Span: 273bp (20.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|62860156|ref|NP_001017346.1| |
score: 59.7 |
e-value: 3e-07 |
Identity: 36% |
Span: 216bp (16.0%) |
Frame: 2 |
| polymerase |
| Match: gi|71021573|ref|XP_761017.1| |
score: 59.3 |
e-value: 4e-07 |
Identity: 21.37% |
Span: 1071bp (79.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|29436450|gb|AAH49426.1| |
score: 58.9 |
e-value: 5e-07 |
Identity: 34.41% |
Span: 261bp (19.3%) |
Frame: 2 |
| gi|29436450|gb|AAH49426.1| Similar to RIKEN cDNA 2810426M17 gene [Danio rerio] |
| Match: gi|68085169|gb|AAH66421.2| |
score: 58.9 |
e-value: 5e-07 |
Identity: 34.41% |
Span: 261bp (19.3%) |
Frame: 2 |
| Zgc:56407 |
| Match: gi|50305943|ref|XP_452932.1| |
score: 58.9 |
e-value: 5e-07 |
Identity: 31.11% |
Span: 270bp (19.9%) |
Frame: 2 |
| unnamed |
| Match: gi|47213207|emb|CAF95323.1| |
score: 58.2 |
e-value: 9e-07 |
Identity: 41.89% |
Span: 216bp (16.0%) |
Frame: 2 |
| gi|47213207|emb|CAF95323.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|72679956|gb|AAI00214.1| |
score: 58.2 |
e-value: 9e-07 |
Identity: 34.67% |
Span: 216bp (16.0%) |
Frame: 2 |
| Unknown |
| Match: gi|71051834|gb|AAH99167.1| |
score: 57 |
e-value: 2e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| Polymerase |
| Match: gi|73994050|ref|XP_851340.1| |
score: 56.6 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|109085816|ref|XP_001102982.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|16359281|gb|AAH16102.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| Polymerase |
| Match: gi|13325349|gb|AAH04484.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| Polymerase |
| Match: gi|55630338|ref|XP_519647.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|24429621|gb|AAM18216.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| gi|24429621|gb|AAM18216.1| RNA polymerase III 53 kDa subunit RPC4 [Homo sapiens] |
| Match: gi|12850356|dbj|BAB28687.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| gi|12850356|dbj|BAB28687.1| unnamed protein product [Mus musculus] |
| Match: gi|179513|gb|AAA51838.1| |
score: 56.2 |
e-value: 3e-06 |
Identity: 32.14% |
Span: 243bp (17.9%) |
Frame: 2 |
| BN51 |
| Match: gi|109658241|gb|AAI18213.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 30.95% |
Span: 243bp (17.9%) |
Frame: 2 |
| POLR3D |
| Match: gi|44982727|gb|AAS51990.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 40.32% |
Span: 186bp (13.7%) |
Frame: 2 |
| ADR070Wp |
| Match: gi|6320050|ref|NP_010131.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 36.36% |
Span: 225bp (16.6%) |
Frame: 2 |
| gi|6320050|ref|NP_010131.1| RNA polymerase III (C) subunit, homologus to human BN51 protein; Rpc53p [Saccharomyces ce... |
| Match: gi|66792718|ref|NP_001019670.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 33.8% |
Span: 213bp (15.7%) |
Frame: 2 |
| RNA |
| Match: gi|108875171|gb|EAT39396.1| |
score: 52.4 |
e-value: 5e-05 |
Identity: 32.39% |
Span: 213bp (15.7%) |
Frame: 2 |
| conserved |
| Match: gi|259914|gb|AAB24174.1| |
score: 51.6 |
e-value: 8e-05 |
Identity: 35.06% |
Span: 225bp (16.6%) |
Frame: 2 |
| gi|259914|gb|AAB24174.1| Pet56-C53 fusion protein=N-terminal part of mitochondrially targeted protein fused to C-term... |
| Match: gi|4382|emb|CAA45073.1| |
score: 51.6 |
e-value: 8e-05 |
Identity: 35.06% |
Span: 225bp (16.6%) |
Frame: 2 |
| gi|4382|emb|CAA45073.1| Fourth subunit of yeast RNA polymerase C [Saccharomyces cerevisiae] |
| Match: gi|68066935|ref|XP_675439.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 31.25% |
Span: 192bp (14.2%) |
Frame: 2 |
| hypothetical |
|
| 15 lower scoring hits censored -- only 37 best hits are stored. |
