| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 379 |
e-value: 1e-103 |
Identity: 75.86% |
Span: 849bp (59.4%) |
Frame: 1 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 353.2 |
e-value: 6.9e-96 |
Identity: 67.41% |
Span: 888bp (62.1%) |
Frame: 1 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|19032260|emb|CAD18921.1| |
score: 292.7 |
e-value: 1.1e-77 |
Identity: 77.09% |
Span: 537bp (37.6%) |
Frame: 1 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|1076251|pir||S50765 |
score: 290.8 |
e-value: 4.2e-77 |
Identity: 79.1% |
Span: 531bp (37.2%) |
Frame: 1 |
| gi|1076251|pir||S50765 RNA-binding protein - common ice plant gi|388621|gb|AAA33039.1| RNA-binding protein |
| Match: gi|7446357|pir||T06817 |
score: 282 |
e-value: 1.9e-74 |
Identity: 76.37% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|7446357|pir||T06817 RNA-binding protein - garden pea gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum] ... |
| Match: gi|100903|pir||S23780 |
score: 281.6 |
e-value: 2.5e-74 |
Identity: 76.7% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|100903|pir||S23780 nucleic acid-binding protein - maize gi|168526|gb|AAA33486.1| nucleic acid-binding protein |
| Match: gi|15294254|gb|AAK95304.1| |
score: 278.1 |
e-value: 2.8e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|15294254|gb|AAK95304.1| AT4g24770/F22K18_30 [Arabidopsis thaliana] gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 ... |
| Match: gi|15233980|ref|NP_194208.1| |
score: 277.7 |
e-value: 3.7e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|15233980|ref|NP_194208.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|681908|dbj|BAA06521.1| |
score: 277.7 |
e-value: 3.7e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|99684|pir||S20940 |
score: 277.7 |
e-value: 3.7e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|99684|pir||S20940 DNA-binding protein - Arabidopsis thaliana |
| Match: gi|475719|gb|AAA18379.1| |
score: 277.7 |
e-value: 3.7e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|1076305|pir||S53492 |
score: 277.7 |
e-value: 3.7e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|1076305|pir||S53492 RNA-binding protein cp31 precursor - Arabidopsis thaliana gi|681906|dbj|BAA06520.1| cp31 [Arab... |
| Match: gi|629557|pir||S49030 |
score: 277.7 |
e-value: 3.7e-73 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|629557|pir||S49030 RNA-binding protein RNP-D precursor - Arabidopsis thaliana (fragment) gi|510240|emb|CAA43420.1... |
| Match: gi|7446356|pir||T06232 |
score: 276.9 |
e-value: 6.3e-73 |
Identity: 73.86% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|7446356|pir||T06232 Ps16 protein - wheat gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum] |
| Match: gi|99565|pir||S15348 |
score: 276.2 |
e-value: 1.1e-72 |
Identity: 79.66% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 276.2 |
e-value: 1.1e-72 |
Identity: 79.66% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|21309|emb|CAA41023.1| |
score: 276.2 |
e-value: 1.1e-72 |
Identity: 79.66% |
Span: 528bp (36.9%) |
Frame: 1 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|42407939|dbj|BAD09078.1| |
score: 272.7 |
e-value: 1.2e-71 |
Identity: 72.73% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7446358|pir||T05725 |
score: 272.7 |
e-value: 1.2e-71 |
Identity: 72.73% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|7446358|pir||T05725 cp31AHv protein - barley gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vu... |
| Match: gi|19032262|emb|CAD18922.1| |
score: 263.5 |
e-value: 7.2e-69 |
Identity: 69.83% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|15240641|ref|NP_199836.1| |
score: 263.1 |
e-value: 9.4e-69 |
Identity: 72.16% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|7446359|pir||T05727 |
score: 255.8 |
e-value: 1.5e-66 |
Identity: 67.05% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|7446359|pir||T05727 nucleic acid-binding protein - barley gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subs... |
| Match: gi|7446355|pir||S71556 |
score: 255 |
e-value: 2.5e-66 |
Identity: 72.47% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|7446355|pir||S71556 DNA-binding protein CEBP-1 - clove pink gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] |
| Match: gi|475720|gb|AAA18380.1| |
score: 252.7 |
e-value: 1.3e-65 |
Identity: 75.16% |
Span: 483bp (33.8%) |
Frame: 1 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|34913270|ref|NP_917982.1| |
score: 195.3 |
e-value: 2.4e-48 |
Identity: 56.04% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|34913270|ref|NP_917982.1| putative ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|22296371|dbj|BAC1... |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 190.3 |
e-value: 7.7e-47 |
Identity: 53.68% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|12230585|sp|Q08937|ROC2_NICSY |
score: 189.9 |
e-value: 1e-46 |
Identity: 51.49% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) gi|100294|pir||S20070 ribo... |
| Match: gi|42407940|dbj|BAD09079.1| |
score: 189.5 |
e-value: 1.3e-46 |
Identity: 68.22% |
Span: 387bp (27.1%) |
Frame: 1 |
| gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|18921322|gb|AAL82527.1| |
score: 188.7 |
e-value: 2.2e-46 |
Identity: 54.14% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|18921322|gb|AAL82527.1| putative ribonucleoprotein [Oryza sativa] |
| Match: gi|1350821|sp|P49314|ROC2_NICPL |
score: 188.7 |
e-value: 2.2e-46 |
Identity: 51.49% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|1350821|sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) gi|280403|pir||S26204 RNA-... |
| Match: gi|17432522|gb|AAL39067.1| |
score: 187.6 |
e-value: 5e-46 |
Identity: 41.04% |
Span: 888bp (62.1%) |
Frame: 1 |
| gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|21617920|gb|AAM66970.1| |
score: 187.6 |
e-value: 5e-46 |
Identity: 52.02% |
Span: 537bp (37.6%) |
Frame: 1 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|15228102|ref|NP_181259.1| |
score: 187.6 |
e-value: 5e-46 |
Identity: 52.02% |
Span: 537bp (37.6%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 184.1 |
e-value: 5.5e-45 |
Identity: 51.53% |
Span: 537bp (37.6%) |
Frame: 1 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|7446360|pir||T09108 |
score: 183 |
e-value: 1.2e-44 |
Identity: 53.07% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|7446360|pir||T09108 RNA binding protein, 24K, chloroplast - spinach (fragment) gi|1015370|gb|AAA79045.1| 24 kDa RN... |
| Match: gi|15218972|ref|NP_176208.1| |
score: 147.9 |
e-value: 4.4e-34 |
Identity: 45.61% |
Span: 513bp (35.9%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|47847880|dbj|BAD21673.1| |
score: 146.7 |
e-value: 9.8e-34 |
Identity: 38.74% |
Span: 666bp (46.6%) |
Frame: 1 |
| gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica cultivar-group)] >gi|... |
| Match: gi|17064758|gb|AAL32533.1| |
score: 146 |
e-value: 1.7e-33 |
Identity: 38.59% |
Span: 525bp (36.7%) |
Frame: 1 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|681912|dbj|BAA06523.1| |
score: 145.2 |
e-value: 2.8e-33 |
Identity: 38.04% |
Span: 525bp (36.7%) |
Frame: 1 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 145.2 |
e-value: 2.8e-33 |
Identity: 38.04% |
Span: 525bp (36.7%) |
Frame: 1 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|1076509|pir||S49463 |
score: 143.3 |
e-value: 1.1e-32 |
Identity: 43.27% |
Span: 513bp (35.9%) |
Frame: 1 |
| gi|1076509|pir||S49463 RNA-binding protein RNP1 precursor - kidney bean gi|558629|emb|CAA57551.1| chloroplast RNA bin... |
| Match: gi|133249|sp|P19684|ROC5_NICSY |
score: 142.9 |
e-value: 1.4e-32 |
Identity: 40.11% |
Span: 519bp (36.3%) |
Frame: 1 |
| gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor gi|100390|pir||S12111 ribonucleoprotei... |
| Match: gi|7446342|pir||S77714 |
score: 142.5 |
e-value: 1.8e-32 |
Identity: 40.11% |
Span: 519bp (36.3%) |
Frame: 1 |
| gi|7446342|pir||S77714 RNA-binding protein precursor, 33K - wood tobacco gi|311952|emb|CAA41253.1| 33 kd chloroplast ... |
| Match: gi|7446361|pir||T12196 |
score: 140.6 |
e-value: 7e-32 |
Identity: 39.77% |
Span: 513bp (35.9%) |
Frame: 1 |
| gi|7446361|pir||T12196 RNA-binding protein - fava bean (fragment) gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding pr... |
| Match: gi|34394882|dbj|BAC84331.1| |
score: 140.2 |
e-value: 9.1e-32 |
Identity: 40.66% |
Span: 522bp (36.5%) |
Frame: 1 |
| gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7446339|pir||T05730 |
score: 135.2 |
e-value: 2.9e-30 |
Identity: 39.13% |
Span: 522bp (36.5%) |
Frame: 1 |
| gi|7446339|pir||T05730 probable RNA-binding protein cp33 precursor - barley gi|3550485|emb|CAA11894.1| cp33Hv [Hordeu... |
| Match: gi|100376|pir||S18883 |
score: 130.6 |
e-value: 7.2e-29 |
Identity: 40.61% |
Span: 468bp (32.8%) |
Frame: 1 |
| gi|100376|pir||S18883 ribonucleoprotein precursor - common tobacco (fragment) gi|20009|emb|CAA43429.1| ribonucleoprot... |
| Match: gi|7578881|gb|AAF64167.1| |
score: 122.1 |
e-value: 2.6e-26 |
Identity: 36.36% |
Span: 510bp (35.7%) |
Frame: 1 |
| gi|7578881|gb|AAF64167.1| plastid-specific ribosomal protein 2 precursor [Spinacia oleracea] |
| Match: gi|30693595|ref|NP_566958.3| |
score: 116.7 |
e-value: 1.1e-24 |
Identity: 37.85% |
Span: 510bp (35.7%) |
Frame: 1 |
| gi|30693595|ref|NP_566958.3| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|17979394|gb|AAL... |
| Match: gi|38346724|emb|CAE04874.2| |
score: 116.7 |
e-value: 1.1e-24 |
Identity: 37.87% |
Span: 501bp (35.1%) |
Frame: 1 |
| gi|38346724|emb|CAE04874.2| OSJNBa0086O06.22 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38109806|gb|EAA55617.1| |
score: 115.5 |
e-value: 2.4e-24 |
Identity: 37.5% |
Span: 525bp (36.7%) |
Frame: 1 |
| gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magnaporthe grisea 70-15] |
| Match: gi|42408309|dbj|BAD09463.1| |
score: 112.1 |
e-value: 2.7e-23 |
Identity: 38.12% |
Span: 516bp (36.1%) |
Frame: 1 |
| gi|42408309|dbj|BAD09463.1| putative RNA-binding protein RNP-D precursor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15231817|ref|NP_190914.1| |
score: 111.7 |
e-value: 3.5e-23 |
Identity: 61.18% |
Span: 255bp (17.8%) |
Frame: 1 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|30693824|ref|NP_850692.1| |
score: 111.7 |
e-value: 3.5e-23 |
Identity: 61.18% |
Span: 255bp (17.8%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 111.7 |
e-value: 3.5e-23 |
Identity: 61.18% |
Span: 255bp (17.8%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|45198625|ref|NP_985654.1| |
score: 111.3 |
e-value: 4.5e-23 |
Identity: 33.89% |
Span: 519bp (36.3%) |
Frame: 1 |
| gi|45198625|ref|NP_985654.1| AFR107Wp [Eremothecium gossypii] >gi|44984635|gb|AAS53478.1| AFR107Wp [Eremothecium goss... |
| Match: gi|34860763|ref|XP_230831.2| |
score: 105.1 |
e-value: 3.3e-21 |
Identity: 34.05% |
Span: 525bp (36.7%) |
Frame: 1 |
| gi|34860763|ref|XP_230831.2| similar to embryonic poly(A) binding protein [Rattus norvegicus] |
| Match: gi|15226983|ref|NP_181084.1| |
score: 104.8 |
e-value: 4.3e-21 |
Identity: 34.88% |
Span: 495bp (34.6%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi360814... |
| Match: gi|41151222|ref|XP_114158.3| |
score: 104.8 |
e-value: 4.3e-21 |
Identity: 34.59% |
Span: 525bp (36.7%) |
Frame: 1 |
| gi|41151222|ref|XP_114158.3| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) [Homo sa... |
| Match: gi|253181|gb|AAB22809.1| |
score: 104.8 |
e-value: 4.3e-21 |
Identity: 30.94% |
Span: 528bp (36.9%) |
Frame: 1 |
| gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa] |
| Match: gi|30693824|ref|NP_850692.1| |
score: 90.12 |
e-value: 1.1e-16 |
Identity: 53.26% |
Span: 267bp (18.7%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|15228102|ref|NP_181259.1| |
score: 90.12 |
e-value: 1.1e-16 |
Identity: 39.32% |
Span: 345bp (24.1%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|15231817|ref|NP_190914.1| |
score: 90.12 |
e-value: 1.1e-16 |
Identity: 53.26% |
Span: 267bp (18.7%) |
Frame: 1 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 90.12 |
e-value: 1.1e-16 |
Identity: 53.26% |
Span: 267bp (18.7%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|21617920|gb|AAM66970.1| |
score: 89.74 |
e-value: 1.4e-16 |
Identity: 46.24% |
Span: 273bp (19.1%) |
Frame: 1 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|18921322|gb|AAL82527.1| |
score: 88.2 |
e-value: 4.1e-16 |
Identity: 44.94% |
Span: 267bp (18.7%) |
Frame: 1 |
| gi|18921322|gb|AAL82527.1| putative ribonucleoprotein [Oryza sativa] |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 87.43 |
e-value: 7e-16 |
Identity: 46.07% |
Span: 267bp (18.7%) |
Frame: 1 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|41151222|ref|XP_114158.3| |
score: 86.27 |
e-value: 1.6e-15 |
Identity: 37.68% |
Span: 411bp (28.8%) |
Frame: 1 |
| gi|41151222|ref|XP_114158.3| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) [Homo sa... |
| Match: gi|34913270|ref|NP_917982.1| |
score: 85.89 |
e-value: 2e-15 |
Identity: 45.35% |
Span: 258bp (18.1%) |
Frame: 1 |
| gi|34913270|ref|NP_917982.1| putative ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|22296371|dbj|BAC1... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 85.11 |
e-value: 3.5e-15 |
Identity: 43.18% |
Span: 264bp (18.5%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|15231817|ref|NP_190914.1| |
score: 85.11 |
e-value: 3.5e-15 |
Identity: 43.18% |
Span: 264bp (18.5%) |
Frame: 1 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|30693824|ref|NP_850692.1| |
score: 85.11 |
e-value: 3.5e-15 |
Identity: 43.18% |
Span: 264bp (18.5%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|475720|gb|AAA18380.1| |
score: 84.34 |
e-value: 6e-15 |
Identity: 50% |
Span: 264bp (18.5%) |
Frame: 1 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 84.34 |
e-value: 6e-15 |
Identity: 42.27% |
Span: 291bp (20.4%) |
Frame: 1 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|1350821|sp|P49314|ROC2_NICPL |
score: 81.65 |
e-value: 3.9e-14 |
Identity: 44.83% |
Span: 261bp (18.3%) |
Frame: 1 |
| gi|1350821|sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) gi|280403|pir||S26204 RNA-... |
| Match: gi|681912|dbj|BAA06523.1| |
score: 80.88 |
e-value: 6.6e-14 |
Identity: 47.44% |
Span: 234bp (16.4%) |
Frame: 1 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|7446360|pir||T09108 |
score: 80.88 |
e-value: 6.6e-14 |
Identity: 46.59% |
Span: 264bp (18.5%) |
Frame: 1 |
| gi|7446360|pir||T09108 RNA binding protein, 24K, chloroplast - spinach (fragment) gi|1015370|gb|AAA79045.1| 24 kDa RN... |
| Match: gi|100376|pir||S18883 |
score: 80.88 |
e-value: 6.6e-14 |
Identity: 48.05% |
Span: 231bp (16.2%) |
Frame: 1 |
| gi|100376|pir||S18883 ribonucleoprotein precursor - common tobacco (fragment) gi|20009|emb|CAA43429.1| ribonucleoprot... |
| Match: gi|12230585|sp|Q08937|ROC2_NICSY |
score: 80.88 |
e-value: 6.6e-14 |
Identity: 43.68% |
Span: 261bp (18.3%) |
Frame: 1 |
| gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) gi|100294|pir||S20070 ribo... |
| Match: gi|34394882|dbj|BAC84331.1| |
score: 79.72 |
e-value: 1.5e-13 |
Identity: 43.3% |
Span: 288bp (20.2%) |
Frame: 1 |
| gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7446339|pir||T05730 |
score: 78.95 |
e-value: 2.5e-13 |
Identity: 42.27% |
Span: 291bp (20.4%) |
Frame: 1 |
| gi|7446339|pir||T05730 probable RNA-binding protein cp33 precursor - barley gi|3550485|emb|CAA11894.1| cp33Hv [Hordeu... |
| Match: gi|42407940|dbj|BAD09079.1| |
score: 78.18 |
e-value: 4.3e-13 |
Identity: 46.67% |
Span: 270bp (18.9%) |
Frame: 1 |
| gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30693595|ref|NP_566958.3| |
score: 77.8 |
e-value: 5.6e-13 |
Identity: 38.54% |
Span: 276bp (19.3%) |
Frame: 1 |
| gi|30693595|ref|NP_566958.3| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|17979394|gb|AAL... |
| Match: gi|47847880|dbj|BAD21673.1| |
score: 76.64 |
e-value: 1.2e-12 |
Identity: 43.75% |
Span: 240bp (16.8%) |
Frame: 1 |
| gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica cultivar-group)] >gi|... |
| Match: gi|7446361|pir||T12196 |
score: 75.87 |
e-value: 2.1e-12 |
Identity: 36.84% |
Span: 282bp (19.7%) |
Frame: 1 |
| gi|7446361|pir||T12196 RNA-binding protein - fava bean (fragment) gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding pr... |
| Match: gi|30693824|ref|NP_850692.1| |
score: 74.71 |
e-value: 4.7e-12 |
Identity: 44.32% |
Span: 264bp (18.5%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 74.71 |
e-value: 4.7e-12 |
Identity: 44.32% |
Span: 264bp (18.5%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|15231817|ref|NP_190914.1| |
score: 74.71 |
e-value: 4.7e-12 |
Identity: 44.32% |
Span: 264bp (18.5%) |
Frame: 1 |
| CP29; RNA binding / poly(U) binding [Arabidopsis thaliana] >gi186511018|ref|NP_850692.2| CP29; RNA binding / poly(U) ... |
| Match: gi|1076509|pir||S49463 |
score: 72.4 |
e-value: 2.3e-11 |
Identity: 47.56% |
Span: 246bp (17.2%) |
Frame: 1 |
| gi|1076509|pir||S49463 RNA-binding protein RNP1 precursor - kidney bean gi|558629|emb|CAA57551.1| chloroplast RNA bin... |
| Match: gi|7578881|gb|AAF64167.1| |
score: 72.02 |
e-value: 3.1e-11 |
Identity: 43.59% |
Span: 234bp (16.4%) |
Frame: 1 |
| gi|7578881|gb|AAF64167.1| plastid-specific ribosomal protein 2 precursor [Spinacia oleracea] |
| Match: gi|1350821|sp|P49314|ROC2_NICPL |
score: 71.25 |
e-value: 5.2e-11 |
Identity: 42.22% |
Span: 270bp (18.9%) |
Frame: 1 |
| gi|1350821|sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31) gi|280403|pir||S26204 RNA-... |
| Match: gi|12230585|sp|Q08937|ROC2_NICSY |
score: 70.48 |
e-value: 8.9e-11 |
Identity: 42.22% |
Span: 270bp (18.9%) |
Frame: 1 |
| gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) gi|100294|pir||S20070 ribo... |
| Match: gi|15218972|ref|NP_176208.1| |
score: 70.09 |
e-value: 1.2e-10 |
Identity: 39.76% |
Span: 249bp (17.4%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|7446361|pir||T12196 |
score: 68.17 |
e-value: 4.4e-10 |
Identity: 44.44% |
Span: 243bp (17.0%) |
Frame: 1 |
| gi|7446361|pir||T12196 RNA-binding protein - fava bean (fragment) gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding pr... |
| Match: gi|34860763|ref|XP_230831.2| |
score: 68.17 |
e-value: 4.4e-10 |
Identity: 26.86% |
Span: 525bp (36.7%) |
Frame: 1 |
| gi|34860763|ref|XP_230831.2| similar to embryonic poly(A) binding protein [Rattus norvegicus] |
| Match: gi|17064758|gb|AAL32533.1| |
score: 67.78 |
e-value: 5.8e-10 |
Identity: 39.08% |
Span: 261bp (18.3%) |
Frame: 1 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|681912|dbj|BAA06523.1| |
score: 65.85 |
e-value: 2.2e-09 |
Identity: 37.93% |
Span: 261bp (18.3%) |
Frame: 1 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 65.85 |
e-value: 2.2e-09 |
Identity: 37.93% |
Span: 261bp (18.3%) |
Frame: 1 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|133249|sp|P19684|ROC5_NICSY |
score: 62.39 |
e-value: 2.4e-08 |
Identity: 30.28% |
Span: 417bp (29.2%) |
Frame: 1 |
| gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor gi|100390|pir||S12111 ribonucleoprotei... |
| Match: gi|45198625|ref|NP_985654.1| |
score: 46.59 |
e-value: 0.001 |
Identity: 27.91% |
Span: 387bp (27.1%) |
Frame: 1 |
| gi|45198625|ref|NP_985654.1| AFR107Wp [Eremothecium gossypii] >gi|44984635|gb|AAS53478.1| AFR107Wp [Eremothecium goss... |
|
| 82 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At4g24770.1 |
score: 277.7 |
e-value: 9.5e-75 |
Identity: 74.3% |
Span: 537bp (37.6%) |
Frame: 1 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At5g50250.1 |
score: 263.1 |
e-value: 2.4e-70 |
Identity: 72.16% |
Span: 528bp (36.9%) |
Frame: 1 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At2g37220.1 |
score: 187.6 |
e-value: 1.3e-47 |
Identity: 52.02% |
Span: 537bp (37.6%) |
Frame: 1 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At1g60000.1 |
score: 147.9 |
e-value: 1.1e-35 |
Identity: 45.61% |
Span: 513bp (35.9%) |
Frame: 1 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At3g52380.1 |
score: 145.2 |
e-value: 7.3e-35 |
Identity: 38.04% |
Span: 525bp (36.7%) |
Frame: 1 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At3g52150.1 |
score: 116.7 |
e-value: 2.8e-26 |
Identity: 37.85% |
Span: 510bp (35.7%) |
Frame: 1 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At3g53460.1 |
score: 111.7 |
e-value: 9e-25 |
Identity: 61.18% |
Span: 255bp (17.8%) |
Frame: 1 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.2 |
score: 111.7 |
e-value: 9e-25 |
Identity: 61.18% |
Span: 255bp (17.8%) |
Frame: 1 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g35410.1 |
score: 104.8 |
e-value: 1.1e-22 |
Identity: 34.88% |
Span: 495bp (34.6%) |
Frame: 1 |
| At2g35410.1 68409.m03925 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to SP|P19... |
| Match: At1g01080.1 |
score: 98.6 |
e-value: 7.9e-21 |
Identity: 32.24% |
Span: 519bp (36.3%) |
Frame: 1 |
| At1g01080.1 68408.m00008 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to 33 KDA... |
| Match: At2g21660.1 |
score: 91.66 |
e-value: 9.6e-19 |
Identity: 50% |
Span: 240bp (16.8%) |
Frame: 1 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.2 |
score: 91.66 |
e-value: 9.6e-19 |
Identity: 50% |
Span: 240bp (16.8%) |
Frame: 1 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At4g26650.1 |
score: 91.28 |
e-value: 1.3e-18 |
Identity: 29.02% |
Span: 534bp (37.4%) |
Frame: 1 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g16380.1 |
score: 90.51 |
e-value: 2.1e-18 |
Identity: 33.15% |
Span: 525bp (36.7%) |
Frame: 1 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At2g37220.1 |
score: 90.12 |
e-value: 2.8e-18 |
Identity: 39.32% |
Span: 345bp (24.1%) |
Frame: 1 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g53460.1 |
score: 90.12 |
e-value: 2.8e-18 |
Identity: 53.26% |
Span: 267bp (18.7%) |
Frame: 1 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.2 |
score: 90.12 |
e-value: 2.8e-18 |
Identity: 53.26% |
Span: 267bp (18.7%) |
Frame: 1 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g07810.1 |
score: 90.12 |
e-value: 2.8e-18 |
Identity: 31.52% |
Span: 510bp (35.7%) |
Frame: 1 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.2 |
score: 90.12 |
e-value: 2.8e-18 |
Identity: 31.52% |
Span: 510bp (35.7%) |
Frame: 1 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At5g54900.1 |
score: 89.74 |
e-value: 3.7e-18 |
Identity: 30.06% |
Span: 516bp (36.1%) |
Frame: 1 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At5g19350.1 |
score: 89.74 |
e-value: 3.7e-18 |
Identity: 32.4% |
Span: 528bp (36.9%) |
Frame: 1 |
| At5g19350.1 68412.m02111 RNA binding protein 45 (RBP45), putative NULL |
| Match: At1g17640.1 |
score: 89.35 |
e-value: 4.8e-18 |
Identity: 29.83% |
Span: 537bp (37.6%) |
Frame: 1 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g22760.1 |
score: 88.97 |
e-value: 6.2e-18 |
Identity: 29.73% |
Span: 525bp (36.7%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At5g40490.1 |
score: 88.58 |
e-value: 8.1e-18 |
Identity: 29.48% |
Span: 519bp (36.3%) |
Frame: 1 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At4g39260.3 |
score: 87.81 |
e-value: 1.4e-17 |
Identity: 48.75% |
Span: 240bp (16.8%) |
Frame: 1 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.2 |
score: 87.81 |
e-value: 1.4e-17 |
Identity: 48.75% |
Span: 240bp (16.8%) |
Frame: 1 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g13850.2 |
score: 87.81 |
e-value: 1.4e-17 |
Identity: 48.75% |
Span: 240bp (16.8%) |
Frame: 1 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g13850.1 |
score: 87.81 |
e-value: 1.4e-17 |
Identity: 48.75% |
Span: 240bp (16.8%) |
Frame: 1 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g39260.1 |
score: 87.81 |
e-value: 1.4e-17 |
Identity: 48.75% |
Span: 240bp (16.8%) |
Frame: 1 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At2g18510.1 |
score: 87.04 |
e-value: 2.4e-17 |
Identity: 30.64% |
Span: 516bp (36.1%) |
Frame: 1 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At3g23830.1 |
score: 87.04 |
e-value: 2.4e-17 |
Identity: 50.63% |
Span: 237bp (16.6%) |
Frame: 1 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g23830.2 |
score: 87.04 |
e-value: 2.4e-17 |
Identity: 50.63% |
Span: 237bp (16.6%) |
Frame: 1 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At4g36960.1 |
score: 85.89 |
e-value: 5.3e-17 |
Identity: 32.35% |
Span: 510bp (35.7%) |
Frame: 1 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At5g55550.2 |
score: 85.5 |
e-value: 6.9e-17 |
Identity: 29.12% |
Span: 510bp (35.7%) |
Frame: 1 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.3 |
score: 85.5 |
e-value: 6.9e-17 |
Identity: 29.12% |
Span: 510bp (35.7%) |
Frame: 1 |
| At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing protein similar to DAZ associated protein 1 [Homo sap... |
| Match: At5g55550.1 |
score: 85.5 |
e-value: 6.9e-17 |
Identity: 29.12% |
Span: 510bp (35.7%) |
Frame: 1 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g53460.2 |
score: 85.11 |
e-value: 9e-17 |
Identity: 43.18% |
Span: 264bp (18.5%) |
Frame: 1 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 85.11 |
e-value: 9e-17 |
Identity: 43.18% |
Span: 264bp (18.5%) |
Frame: 1 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g13224.2 |
score: 84.73 |
e-value: 1.2e-16 |
Identity: 27.68% |
Span: 531bp (37.2%) |
Frame: 1 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g71770.1 |
score: 83.96 |
e-value: 2e-16 |
Identity: 28.1% |
Span: 600bp (42.0%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At3g26420.1 |
score: 83.57 |
e-value: 2.6e-16 |
Identity: 47.5% |
Span: 240bp (16.8%) |
Frame: 1 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At1g11650.2 |
score: 83.19 |
e-value: 3.4e-16 |
Identity: 29.55% |
Span: 516bp (36.1%) |
Frame: 1 |
| At1g11650.2 68408.m01205 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At1g11650.1 |
score: 83.19 |
e-value: 3.4e-16 |
Identity: 29.55% |
Span: 516bp (36.1%) |
Frame: 1 |
| At1g11650.1 68408.m01204 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At1g74230.1 |
score: 82.8 |
e-value: 4.5e-16 |
Identity: 53.16% |
Span: 237bp (16.6%) |
Frame: 1 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At4g14300.1 |
score: 82.42 |
e-value: 5.8e-16 |
Identity: 30.05% |
Span: 510bp (35.7%) |
Frame: 1 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g61030.1 |
score: 82.03 |
e-value: 7.6e-16 |
Identity: 45.57% |
Span: 237bp (16.6%) |
Frame: 1 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At3g14100.1 |
score: 82.03 |
e-value: 7.6e-16 |
Identity: 31.95% |
Span: 507bp (35.5%) |
Frame: 1 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At2g23350.1 |
score: 81.65 |
e-value: 9.9e-16 |
Identity: 28.81% |
Span: 531bp (37.2%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At3g13224.1 |
score: 81.26 |
e-value: 1.3e-15 |
Identity: 29.41% |
Span: 459bp (32.1%) |
Frame: 1 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g19130.1 |
score: 80.11 |
e-value: 2.9e-15 |
Identity: 31.98% |
Span: 507bp (35.5%) |
Frame: 1 |
| At3g19130.1 68410.m02193 RNA-binding protein, putative similar to RNA Binding Protein 47 [Nicotiana plumbaginifolia] ... |
| Match: At5g47620.2 |
score: 79.72 |
e-value: 3.8e-15 |
Identity: 27.93% |
Span: 510bp (35.7%) |
Frame: 1 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g71770.1 |
score: 79.72 |
e-value: 3.8e-15 |
Identity: 29.71% |
Span: 525bp (36.7%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At1g22760.1 |
score: 78.18 |
e-value: 1.1e-14 |
Identity: 30.11% |
Span: 525bp (36.7%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At3g52150.1 |
score: 77.8 |
e-value: 1.4e-14 |
Identity: 38.54% |
Span: 276bp (19.3%) |
Frame: 1 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At3g53460.1 |
score: 74.71 |
e-value: 1.2e-13 |
Identity: 44.32% |
Span: 264bp (18.5%) |
Frame: 1 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.2 |
score: 74.71 |
e-value: 1.2e-13 |
Identity: 44.32% |
Span: 264bp (18.5%) |
Frame: 1 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g23350.1 |
score: 72.79 |
e-value: 4.6e-13 |
Identity: 28% |
Span: 525bp (36.7%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At1g74230.1 |
score: 72.02 |
e-value: 7.9e-13 |
Identity: 48.15% |
Span: 243bp (17.0%) |
Frame: 1 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At2g23350.1 |
score: 71.25 |
e-value: 1.3e-12 |
Identity: 27.03% |
Span: 525bp (36.7%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At1g60000.1 |
score: 70.09 |
e-value: 3e-12 |
Identity: 39.76% |
Span: 249bp (17.4%) |
Frame: 1 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At3g23830.1 |
score: 69.71 |
e-value: 3.9e-12 |
Identity: 46.99% |
Span: 249bp (17.4%) |
Frame: 1 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g23830.2 |
score: 69.71 |
e-value: 3.9e-12 |
Identity: 46.99% |
Span: 249bp (17.4%) |
Frame: 1 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At5g61030.1 |
score: 68.94 |
e-value: 6.7e-12 |
Identity: 44.44% |
Span: 243bp (17.0%) |
Frame: 1 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At5g55550.1 |
score: 67.4 |
e-value: 1.9e-11 |
Identity: 40.51% |
Span: 237bp (16.6%) |
Frame: 1 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.3 |
score: 67.4 |
e-value: 1.9e-11 |
Identity: 40.51% |
Span: 237bp (16.6%) |
Frame: 1 |
| At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing protein similar to DAZ associated protein 1 [Homo sap... |
| Match: At5g55550.2 |
score: 67.4 |
e-value: 1.9e-11 |
Identity: 40.51% |
Span: 237bp (16.6%) |
Frame: 1 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g16380.1 |
score: 66.63 |
e-value: 3.3e-11 |
Identity: 30.29% |
Span: 525bp (36.7%) |
Frame: 1 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At3g52380.1 |
score: 65.85 |
e-value: 5.6e-11 |
Identity: 37.93% |
Span: 261bp (18.3%) |
Frame: 1 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At2g21660.1 |
score: 65.47 |
e-value: 7.4e-11 |
Identity: 44.44% |
Span: 243bp (17.0%) |
Frame: 1 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.2 |
score: 65.47 |
e-value: 7.4e-11 |
Identity: 44.44% |
Span: 243bp (17.0%) |
Frame: 1 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At5g54900.1 |
score: 64.31 |
e-value: 1.6e-10 |
Identity: 25% |
Span: 501bp (35.1%) |
Frame: 1 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At4g39260.1 |
score: 63.93 |
e-value: 2.1e-10 |
Identity: 41.98% |
Span: 243bp (17.0%) |
Frame: 1 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g16380.1 |
score: 63.93 |
e-value: 2.1e-10 |
Identity: 27.11% |
Span: 498bp (34.8%) |
Frame: 1 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At4g39260.2 |
score: 63.93 |
e-value: 2.1e-10 |
Identity: 41.98% |
Span: 243bp (17.0%) |
Frame: 1 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.3 |
score: 63.93 |
e-value: 2.1e-10 |
Identity: 41.98% |
Span: 243bp (17.0%) |
Frame: 1 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g07810.2 |
score: 63.54 |
e-value: 2.8e-10 |
Identity: 34.94% |
Span: 249bp (17.4%) |
Frame: 1 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.1 |
score: 63.54 |
e-value: 2.8e-10 |
Identity: 34.94% |
Span: 249bp (17.4%) |
Frame: 1 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At1g11650.2 |
score: 62 |
e-value: 8.2e-10 |
Identity: 26.52% |
Span: 501bp (35.1%) |
Frame: 1 |
| At1g11650.2 68408.m01205 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At4g13850.1 |
score: 60.85 |
e-value: 1.8e-09 |
Identity: 43.37% |
Span: 249bp (17.4%) |
Frame: 1 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g13850.2 |
score: 60.85 |
e-value: 1.8e-09 |
Identity: 43.37% |
Span: 249bp (17.4%) |
Frame: 1 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At1g01080.1 |
score: 60.08 |
e-value: 3.1e-09 |
Identity: 40.23% |
Span: 261bp (18.3%) |
Frame: 1 |
| At1g01080.1 68408.m00008 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to 33 KDA... |
| Match: At3g07810.2 |
score: 58.92 |
e-value: 6.9e-09 |
Identity: 36.14% |
Span: 249bp (17.4%) |
Frame: 1 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.1 |
score: 58.92 |
e-value: 6.9e-09 |
Identity: 36.14% |
Span: 249bp (17.4%) |
Frame: 1 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g26420.1 |
score: 58.15 |
e-value: 1.2e-08 |
Identity: 35.53% |
Span: 228bp (16.0%) |
Frame: 1 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At3g14100.1 |
score: 58.15 |
e-value: 1.2e-08 |
Identity: 26.97% |
Span: 453bp (31.7%) |
Frame: 1 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At3g19130.1 |
score: 57.77 |
e-value: 1.5e-08 |
Identity: 25% |
Span: 501bp (35.1%) |
Frame: 1 |
| At3g19130.1 68410.m02193 RNA-binding protein, putative similar to RNA Binding Protein 47 [Nicotiana plumbaginifolia] ... |
| Match: At5g19350.1 |
score: 57.38 |
e-value: 2e-08 |
Identity: 22.16% |
Span: 501bp (35.1%) |
Frame: 1 |
| At5g19350.1 68412.m02111 RNA binding protein 45 (RBP45), putative NULL |
| Match: At5g55550.3 |
score: 57 |
e-value: 2.6e-08 |
Identity: 36.14% |
Span: 249bp (17.4%) |
Frame: 1 |
| At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing protein similar to DAZ associated protein 1 [Homo sap... |
| Match: At5g55550.1 |
score: 57 |
e-value: 2.6e-08 |
Identity: 36.14% |
Span: 249bp (17.4%) |
Frame: 1 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.2 |
score: 57 |
e-value: 2.6e-08 |
Identity: 36.14% |
Span: 249bp (17.4%) |
Frame: 1 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g13224.2 |
score: 53.14 |
e-value: 3.8e-07 |
Identity: 28.24% |
Span: 486bp (34.0%) |
Frame: 1 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g35410.1 |
score: 52.37 |
e-value: 6.5e-07 |
Identity: 36.47% |
Span: 252bp (17.6%) |
Frame: 1 |
| At2g35410.1 68409.m03925 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to SP|P19... |
| Match: At1g11650.1 |
score: 50.45 |
e-value: 2.5e-06 |
Identity: 25.52% |
Span: 393bp (27.5%) |
Frame: 1 |
| At1g11650.1 68408.m01204 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At2g35410.1 |
score: 50.45 |
e-value: 2.5e-06 |
Identity: 32.89% |
Span: 228bp (16.0%) |
Frame: 1 |
| At2g35410.1 68409.m03925 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to SP|P19... |
| Match: At2g18510.1 |
score: 49.68 |
e-value: 4.2e-06 |
Identity: 31.76% |
Span: 252bp (17.6%) |
Frame: 1 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At3g16380.1 |
score: 47.75 |
e-value: 1.6e-05 |
Identity: 32.29% |
Span: 288bp (20.2%) |
Frame: 1 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At5g19350.1 |
score: 47.37 |
e-value: 2.1e-05 |
Identity: 25.58% |
Span: 252bp (17.6%) |
Frame: 1 |
| At5g19350.1 68412.m02111 RNA binding protein 45 (RBP45), putative NULL |
| Match: At3g13224.1 |
score: 46.59 |
e-value: 3.5e-05 |
Identity: 36.36% |
Span: 198bp (13.9%) |
Frame: 1 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g11650.1 |
score: 40.82 |
e-value: 0.002 |
Identity: 27.42% |
Span: 186bp (13.0%) |
Frame: 1 |
| At1g11650.1 68408.m01204 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At1g11650.2 |
score: 40.82 |
e-value: 0.002 |
Identity: 27.42% |
Span: 186bp (13.0%) |
Frame: 1 |
| At1g11650.2 68408.m01205 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
|
| 241 lower scoring hits censored -- only 100 best hits are stored. |
