| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|113205286|gb|ABI34327.1| |
score: 665 |
e-value: 0 |
Identity: 94.58% |
Span: 1107bp (77.3%) |
Frame: 3 |
| Arginine/serine-rich splicing factor RSP41, putative [Solanum demissum] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 383 |
e-value: 2e-104 |
Identity: 60.17% |
Span: 1062bp (74.1%) |
Frame: 3 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|147863191|emb|CAN82624.1| |
score: 383 |
e-value: 2e-104 |
Identity: 60.17% |
Span: 1062bp (74.1%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 333 |
e-value: 2e-89 |
Identity: 53.25% |
Span: 1050bp (73.3%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 333 |
e-value: 2e-89 |
Identity: 55.22% |
Span: 1050bp (73.3%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 331 |
e-value: 1e-88 |
Identity: 53.12% |
Span: 1047bp (73.1%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 330 |
e-value: 3e-88 |
Identity: 61.64% |
Span: 903bp (63.0%) |
Frame: 3 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 330 |
e-value: 3e-88 |
Identity: 52.73% |
Span: 1050bp (73.3%) |
Frame: 3 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|1707370|emb|CAA67799.1| |
score: 328 |
e-value: 6e-88 |
Identity: 61.31% |
Span: 903bp (63.0%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|115443899|ref|NP_001045729.1| |
score: 321 |
e-value: 1e-85 |
Identity: 62.55% |
Span: 810bp (56.5%) |
Frame: 3 |
| Os02g0122800 [Oryza sativa (japonica cultivar-group)] >gi41053015|dbj|BAD07946.1| putative arginine/serine-rich splic... |
| Match: gi|125580623|gb|EAZ21554.1| |
score: 321 |
e-value: 1e-85 |
Identity: 62.55% |
Span: 810bp (56.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|218189952|gb|EEC72379.1| |
score: 321 |
e-value: 1e-85 |
Identity: 62.55% |
Span: 810bp (56.5%) |
Frame: 3 |
| hypothetical protein OsI_05650 [Oryza sativa Indica Group] |
| Match: gi|217071698|gb|ACJ84209.1| |
score: 318 |
e-value: 1e-84 |
Identity: 53.09% |
Span: 1062bp (74.1%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|217071906|gb|ACJ84313.1| |
score: 314 |
e-value: 1e-83 |
Identity: 70.43% |
Span: 687bp (47.9%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|157349243|emb|CAO24389.1| |
score: 304 |
e-value: 1e-80 |
Identity: 71.61% |
Span: 699bp (48.8%) |
Frame: 3 |
| unnamed |
| Match: gi|194696906|gb|ACF82537.1| |
score: 296 |
e-value: 4e-78 |
Identity: 58.18% |
Span: 810bp (56.5%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|116784190|gb|ABK23251.1| |
score: 296 |
e-value: 4e-78 |
Identity: 58.31% |
Span: 849bp (59.2%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|195613160|gb|ACG28410.1| |
score: 296 |
e-value: 3e-78 |
Identity: 58.18% |
Span: 810bp (56.5%) |
Frame: 3 |
| arginine/serine-rich |
| Match: gi|148909122|gb|ABR17662.1| |
score: 294 |
e-value: 1e-77 |
Identity: 53.78% |
Span: 900bp (62.8%) |
Frame: 3 |
| unknown |
| Match: gi|116786163|gb|ABK24003.1| |
score: 289 |
e-value: 5e-76 |
Identity: 57.44% |
Span: 825bp (57.6%) |
Frame: 3 |
| unknown |
| Match: gi|212722462|ref|NP_001132395.1| |
score: 282 |
e-value: 5e-74 |
Identity: 55.32% |
Span: 804bp (56.1%) |
Frame: 3 |
| hypothetical protein LOC100193841 [Zea mays] >gi194694266|gb|ACF81217.1| unknown [Zea mays] |
| Match: gi|116780574|gb|ABK21727.1| |
score: 279 |
e-value: 5e-73 |
Identity: 59.4% |
Span: 771bp (53.8%) |
Frame: 3 |
| unknown |
| Match: gi|145334133|ref|NP_001078447.1| |
score: 276 |
e-value: 3e-72 |
Identity: 51.71% |
Span: 945bp (65.9%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi222423494|dbj|BAH19717.1| ... |
| Match: gi|18412169|ref|NP_567120.1| |
score: 271 |
e-value: 8e-71 |
Identity: 56% |
Span: 825bp (57.6%) |
Frame: 3 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|6899884|emb|CAB71893.1| |
score: 271 |
e-value: 1e-70 |
Identity: 56.04% |
Span: 819bp (57.2%) |
Frame: 3 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 270 |
e-value: 2e-70 |
Identity: 55.64% |
Span: 825bp (57.6%) |
Frame: 3 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|42573039|ref|NP_974616.1| |
score: 264 |
e-value: 2e-68 |
Identity: 50.87% |
Span: 927bp (64.7%) |
Frame: 3 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|217072928|gb|ACJ84824.1| |
score: 260 |
e-value: 2e-67 |
Identity: 57.03% |
Span: 735bp (51.3%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|168038912|ref|XP_001771943.1| |
score: 249 |
e-value: 3e-64 |
Identity: 57.89% |
Span: 681bp (47.5%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162676725|gb|EDQ63204.1| predicted protein [Physcomitrella... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 241 |
e-value: 9e-62 |
Identity: 51.35% |
Span: 759bp (53.0%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|115456922|ref|NP_001052061.1| |
score: 239 |
e-value: 3e-61 |
Identity: 51.92% |
Span: 774bp (54.0%) |
Frame: 3 |
| Os04g0118900 [Oryza sativa (japonica cultivar-group)] >gi38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa (japo... |
| Match: gi|157327144|emb|CAO14416.1| |
score: 233 |
e-value: 4e-59 |
Identity: 66.08% |
Span: 513bp (35.8%) |
Frame: 3 |
| unnamed |
| Match: gi|195615816|gb|ACG29738.1| |
score: 229 |
e-value: 4e-58 |
Identity: 53.85% |
Span: 699bp (48.8%) |
Frame: 3 |
| arginine/serine-rich splicing factor RSP41 [Zea mays] >gi223947499|gb|ACN27833.1| unknown [Zea mays] |
| Match: gi|125589157|gb|EAZ29507.1| |
score: 226 |
e-value: 5e-57 |
Identity: 47.04% |
Span: 774bp (54.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|47680295|gb|AAT37131.1| |
score: 225 |
e-value: 7e-57 |
Identity: 53.15% |
Span: 723bp (50.5%) |
Frame: 3 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|195628072|gb|ACG35866.1| |
score: 224 |
e-value: 1e-56 |
Identity: 48.87% |
Span: 798bp (55.7%) |
Frame: 3 |
| arginine/serine-rich splicing factor RSP41 [Zea mays] |
| Match: gi|212722812|ref|NP_001131484.1| |
score: 224 |
e-value: 2e-56 |
Identity: 48.87% |
Span: 798bp (55.7%) |
Frame: 3 |
| hypothetical protein LOC100192821 [Zea mays] >gi194691660|gb|ACF79914.1| unknown [Zea mays] >gi|224032781|gb|ACN35466... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 219 |
e-value: 5e-55 |
Identity: 50.59% |
Span: 762bp (53.2%) |
Frame: 3 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|162457883|ref|NP_001105264.1| |
score: 202 |
e-value: 5e-50 |
Identity: 53.96% |
Span: 606bp (42.3%) |
Frame: 3 |
| arginine/serine-rich |
| Match: gi|42571257|ref|NP_973702.1| |
score: 197 |
e-value: 2e-48 |
Identity: 49.78% |
Span: 657bp (45.8%) |
Frame: 3 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|159475431|ref|XP_001695822.1| |
score: 140 |
e-value: 3e-31 |
Identity: 40.35% |
Span: 513bp (35.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|6759507|emb|CAB69816.1| |
score: 137 |
e-value: 2e-30 |
Identity: 62.83% |
Span: 339bp (23.7%) |
Frame: 3 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|219123281|ref|XP_002181956.1| |
score: 126 |
e-value: 4e-27 |
Identity: 30.61% |
Span: 810bp (56.5%) |
Frame: 3 |
| predicted |
| Match: gi|159477703|ref|XP_001696948.1| |
score: 122 |
e-value: 6e-26 |
Identity: 41.07% |
Span: 489bp (34.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|194698618|gb|ACF83393.1| |
score: 112 |
e-value: 8e-23 |
Identity: 50% |
Span: 405bp (28.3%) |
Frame: 3 |
| unknown |
| Match: gi|194693536|gb|ACF80852.1| |
score: 108 |
e-value: 2e-21 |
Identity: 48.15% |
Span: 384bp (26.8%) |
Frame: 3 |
| unknown |
| Match: gi|147863191|emb|CAN82624.1| |
score: 107 |
e-value: 3e-21 |
Identity: 29.38% |
Span: 1032bp (72.0%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|187023466|emb|CAP37427.1| |
score: 105 |
e-value: 1e-20 |
Identity: 31.48% |
Span: 825bp (57.6%) |
Frame: 3 |
| Hypothetical |
| Match: gi|209586384|gb|ACI65069.1| |
score: 104 |
e-value: 2e-20 |
Identity: 36.22% |
Span: 522bp (36.4%) |
Frame: 3 |
| predicted |
| Match: gi|41323931|gb|AAS00039.1| |
score: 103 |
e-value: 4e-20 |
Identity: 29.53% |
Span: 1032bp (72.0%) |
Frame: 3 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|187036455|emb|CAP24436.1| |
score: 94.7 |
e-value: 2e-17 |
Identity: 32.24% |
Span: 705bp (49.2%) |
Frame: 3 |
| C. |
| Match: gi|30678391|ref|NP_850933.1| |
score: 92.8 |
e-value: 7e-17 |
Identity: 28.57% |
Span: 891bp (62.2%) |
Frame: 3 |
| gi|30678391|ref|NP_850933.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|30678398|ref|NP_563... |
| Match: gi|78369222|ref|NP_001030349.1| |
score: 92 |
e-value: 1e-16 |
Identity: 26.97% |
Span: 900bp (62.8%) |
Frame: 3 |
| gi|78369222|ref|NP_001030349.1| hypothetical protein LOC507828 [Bos taurus] >gi|77567850|gb|AAI07554.1| Unknown (prot... |
| Match: gi|11527011|gb|AAG36874.1|AF242767_1 |
score: 91.7 |
e-value: 1e-16 |
Identity: 29.73% |
Span: 699bp (48.8%) |
Frame: 3 |
| SF2 |
| Match: gi|25150290|ref|NP_499649.2| |
score: 91.7 |
e-value: 1e-16 |
Identity: 29.73% |
Span: 699bp (48.8%) |
Frame: 3 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|74226809|dbj|BAE27050.1| |
score: 91.3 |
e-value: 2e-16 |
Identity: 26.97% |
Span: 900bp (62.8%) |
Frame: 3 |
| gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus] |
| Match: gi|166844|gb|AAA32856.1| |
score: 91.3 |
e-value: 2e-16 |
Identity: 28.26% |
Span: 891bp (62.2%) |
Frame: 3 |
| gi|166844|gb|AAA32856.1| ribonucleoprotein >gi|1582992|prf||2119375A Ser/Arg-rich protein |
| Match: gi|159479816|ref|XP_001697982.1| |
score: 90.9 |
e-value: 3e-16 |
Identity: 29.08% |
Span: 801bp (55.9%) |
Frame: 3 |
| SR |
| Match: gi|1049088|gb|AAA93073.1| |
score: 89 |
e-value: 1e-15 |
Identity: 27.03% |
Span: 909bp (63.4%) |
Frame: 3 |
| gi|1049088|gb|AAA93073.1| SRp55-1 |
| Match: gi|62079105|ref|NP_001014207.1| |
score: 88.6 |
e-value: 1e-15 |
Identity: 26.89% |
Span: 900bp (62.8%) |
Frame: 3 |
| gi|62079105|ref|NP_001014207.1| hypothetical protein LOC362264 [Rattus norvegicus] >gi|56270156|gb|AAH87121.1| Hypoth... |
| Match: gi|31543689|ref|NP_080775.2| |
score: 88.6 |
e-value: 1e-15 |
Identity: 27.58% |
Span: 900bp (62.8%) |
Frame: 3 |
| gi|31543689|ref|NP_080775.2| arginine/serine-rich splicing factor 6 [Mus musculus] gi|15080592|gb|AAH12039.1| Splicin... |
| Match: gi|215502148|gb|EEC11642.1| |
score: 88.2 |
e-value: 2e-15 |
Identity: 25.62% |
Span: 1053bp (73.5%) |
Frame: 3 |
| alternative |
| Match: gi|12836310|dbj|BAB23599.1| |
score: 87.8 |
e-value: 2e-15 |
Identity: 26.36% |
Span: 900bp (62.8%) |
Frame: 3 |
| gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus] |
| Match: gi|74197209|dbj|BAE35148.1| |
score: 87.8 |
e-value: 2e-15 |
Identity: 26.36% |
Span: 900bp (62.8%) |
Frame: 3 |
| unnamed |
| Match: gi|1049086|gb|AAA93072.1| |
score: 87.4 |
e-value: 3e-15 |
Identity: 27.9% |
Span: 864bp (60.3%) |
Frame: 3 |
| gi|1049086|gb|AAA93072.1| SRp55-3 |
| Match: gi|71895047|ref|NP_001026014.1| |
score: 87.4 |
e-value: 3e-15 |
Identity: 24.93% |
Span: 909bp (63.4%) |
Frame: 3 |
| arginine/serine-rich |
| Match: gi|155372181|ref|NP_001094701.1| |
score: 87.4 |
e-value: 3e-15 |
Identity: 25.72% |
Span: 858bp (59.9%) |
Frame: 3 |
| splicing |
| Match: gi|196004628|ref|XP_002112181.1| |
score: 87.4 |
e-value: 3e-15 |
Identity: 27.62% |
Span: 801bp (55.9%) |
Frame: 3 |
| hypothetical |
| Match: gi|115474019|ref|NP_001060608.1| |
score: 87 |
e-value: 4e-15 |
Identity: 28.03% |
Span: 774bp (54.0%) |
Frame: 3 |
| Os07g0673500 [Oryza sativa (japonica cultivar-group)] >gi113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonic... |
| Match: gi|33146854|dbj|BAC79849.1| |
score: 87 |
e-value: 4e-15 |
Identity: 28.03% |
Span: 774bp (54.0%) |
Frame: 3 |
| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group] |
| Match: gi|20978758|sp|Q8VE97|SFRS4_MOUSE |
score: 86.7 |
e-value: 5e-15 |
Identity: 26.04% |
Span: 801bp (55.9%) |
Frame: 3 |
| Splicing |
| Match: gi|157822515|ref|NP_001102155.1| |
score: 86.7 |
e-value: 5e-15 |
Identity: 26.04% |
Span: 801bp (55.9%) |
Frame: 3 |
| splicing |
| Match: gi|156538036|ref|XP_001603791.1| |
score: 86.7 |
e-value: 5e-15 |
Identity: 28.06% |
Span: 864bp (60.3%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|165377173|ref|NP_065612.2| |
score: 86.7 |
e-value: 5e-15 |
Identity: 26.04% |
Span: 801bp (55.9%) |
Frame: 3 |
| splicing |
| Match: gi|158255842|dbj|BAF83892.1| |
score: 85.9 |
e-value: 8e-15 |
Identity: 26.43% |
Span: 909bp (63.4%) |
Frame: 3 |
| unnamed |
| Match: gi|20127499|ref|NP_006266.2| |
score: 85.9 |
e-value: 8e-15 |
Identity: 26.43% |
Span: 909bp (63.4%) |
Frame: 3 |
| gi|20127499|ref|NP_006266.2| arginine/serine-rich splicing factor 6; splicing factor, arginine/serine-rich, 55 kDa; p... |
| Match: gi|30584231|gb|AAP36364.1| |
score: 85.9 |
e-value: 8e-15 |
Identity: 26.43% |
Span: 909bp (63.4%) |
Frame: 3 |
| gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic construct] |
| Match: gi|126291113|ref|XP_001371339.1| |
score: 85.5 |
e-value: 1e-14 |
Identity: 25.47% |
Span: 900bp (62.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|111226838|ref|XP_001134599.1| |
score: 85.5 |
e-value: 1e-14 |
Identity: 28.81% |
Span: 528bp (36.8%) |
Frame: 3 |
| RNA-binding |
| Match: gi|109000263|ref|XP_001113369.1| |
score: 85.1 |
e-value: 1e-14 |
Identity: 24.68% |
Span: 870bp (60.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109000265|ref|XP_001113540.1| |
score: 85.1 |
e-value: 1e-14 |
Identity: 24.68% |
Span: 870bp (60.7%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|108708089|gb|ABF95884.1| |
score: 84.7 |
e-value: 2e-14 |
Identity: 29.19% |
Span: 846bp (59.0%) |
Frame: 3 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi215692748|dbj|BAG88168.... |
| Match: gi|116175261|ref|NP_001070685.1| |
score: 84.7 |
e-value: 2e-14 |
Identity: 25.07% |
Span: 1062bp (74.1%) |
Frame: 3 |
| splicing |
| Match: gi|47575808|ref|NP_001001248.1| |
score: 84.7 |
e-value: 2e-14 |
Identity: 25.16% |
Span: 882bp (61.5%) |
Frame: 3 |
| gi|47575808|ref|NP_001001248.1| hypothetical protein MGC76055 [Xenopus tropicalis] >gi|45872604|gb|AAH68213.1| Hypoth... |
| Match: gi|58387009|ref|XP_315232.2| |
score: 84.7 |
e-value: 2e-14 |
Identity: 25.52% |
Span: 861bp (60.1%) |
Frame: 3 |
| ENSANGP00000021579 |
| Match: gi|114555162|ref|XP_001155042.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 25.74% |
Span: 831bp (58.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|21361282|ref|NP_005617.2| |
score: 84.3 |
e-value: 2e-14 |
Identity: 26.71% |
Span: 795bp (55.5%) |
Frame: 3 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
| Match: gi|189233695|ref|XP_001812208.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 26.23% |
Span: 867bp (60.5%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|2443473|gb|AAB71386.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 29.48% |
Span: 729bp (50.9%) |
Frame: 3 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|119628063|gb|EAX07658.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 25.74% |
Span: 831bp (58.0%) |
Frame: 3 |
| splicing |
| Match: gi|30678395|ref|NP_850934.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 29.48% |
Span: 729bp (50.9%) |
Frame: 3 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|307438|gb|AAA36649.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 25.74% |
Span: 831bp (58.0%) |
Frame: 3 |
| gi|307438|gb|AAA36649.1| pre-mRNA splicing factor |
| Match: gi|62898449|dbj|BAD97164.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 25.74% |
Span: 831bp (58.0%) |
Frame: 3 |
| gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens] |
| Match: gi|30585347|gb|AAP36946.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 26.71% |
Span: 795bp (55.5%) |
Frame: 3 |
| gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic construct] |
| Match: gi|114555160|ref|XP_001154531.1| |
score: 84.3 |
e-value: 2e-14 |
Identity: 25.74% |
Span: 831bp (58.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|116175257|ref|NP_001070684.1| |
score: 84 |
e-value: 3e-14 |
Identity: 25.68% |
Span: 831bp (58.0%) |
Frame: 3 |
| splicing |
| Match: gi|218188085|gb|EEC70512.1| |
score: 83.2 |
e-value: 5e-14 |
Identity: 30.28% |
Span: 705bp (49.2%) |
Frame: 3 |
| hypothetical protein OsI_01613 [Oryza sativa Indica Group] |
| Match: gi|218196647|gb|EEC79074.1| |
score: 83.2 |
e-value: 5e-14 |
Identity: 28.85% |
Span: 888bp (62.0%) |
Frame: 3 |
| hypothetical protein OsI_19658 [Oryza sativa Indica Group] |
| Match: gi|114555170|ref|XP_001154879.1| |
score: 82.4 |
e-value: 9e-14 |
Identity: 26.28% |
Span: 828bp (57.8%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|148909953|gb|ABR18062.1| |
score: 82.4 |
e-value: 9e-14 |
Identity: 25.5% |
Span: 816bp (56.9%) |
Frame: 3 |
| unknown [Picea sitchensis] |
|
| 65 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 13 hits recorded |
| Match: At5G52040.2 |
score: 333 |
e-value: 2e-91 |
Identity: 55.22% |
Span: 1050bp (73.3%) |
Frame: 3 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At4G25500.1 |
score: 333 |
e-value: 2e-91 |
Identity: 53.25% |
Span: 1050bp (73.3%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.1 |
score: 330 |
e-value: 2e-90 |
Identity: 61.64% |
Span: 903bp (63.0%) |
Frame: 3 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At4G25500.3 |
score: 276 |
e-value: 2e-74 |
Identity: 51.71% |
Span: 945bp (65.9%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35) | chr4:... |
| Match: At3G61860.1 |
score: 271 |
e-value: 6e-73 |
Identity: 56% |
Span: 825bp (57.6%) |
Frame: 3 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At4G25500.2 |
score: 264 |
e-value: 1e-70 |
Identity: 50.87% |
Span: 927bp (64.7%) |
Frame: 3 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At2G46610.1 |
score: 241 |
e-value: 6e-64 |
Identity: 51.35% |
Span: 759bp (53.0%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At2G46610.2 |
score: 197 |
e-value: 1e-50 |
Identity: 49.78% |
Span: 657bp (45.8%) |
Frame: 3 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At1G02840.3 |
score: 92.8 |
e-value: 5e-19 |
Identity: 28.57% |
Span: 891bp (62.2%) |
Frame: 3 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.1 |
score: 92.8 |
e-value: 5e-19 |
Identity: 28.57% |
Span: 891bp (62.2%) |
Frame: 3 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.2 |
score: 84.3 |
e-value: 2e-16 |
Identity: 29.48% |
Span: 729bp (50.9%) |
Frame: 3 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At4G02430.2 |
score: 79.7 |
e-value: 4e-15 |
Identity: 29.64% |
Span: 768bp (53.6%) |
Frame: 3 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At1G07350.1 |
score: 72.8 |
e-value: 5e-13 |
Identity: 34.3% |
Span: 483bp (33.7%) |
Frame: 3 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2257730-2260099 REVERSE |
|
| swissprot [blastx] | Showing best 24 hits recorded |
| Match: P92965 |
score: 333 |
e-value: 1e-90 |
Identity: 53.25% |
Span: 1050bp (73.3%) |
Frame: 3 |
| Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2 |
| Match: P92966 |
score: 330 |
e-value: 2e-89 |
Identity: 61.64% |
Span: 903bp (63.0%) |
Frame: 3 |
| Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2 |
| Match: P92964 |
score: 271 |
e-value: 5e-72 |
Identity: 56% |
Span: 825bp (57.6%) |
Frame: 3 |
| Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana GN=RSP31 PE=1 SV=2 |
| Match: O22315 |
score: 92.8 |
e-value: 4e-18 |
Identity: 28.57% |
Span: 891bp (62.2%) |
Frame: 3 |
| Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1 |
| Match: Q3B7L6 |
score: 92 |
e-value: 7e-18 |
Identity: 26.97% |
Span: 900bp (62.8%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 6 OS=Bos taurus GN=SFRS6 PE=2 SV=1 |
| Match: Q9NEW6 |
score: 91.7 |
e-value: 1e-17 |
Identity: 29.73% |
Span: 699bp (48.8%) |
Frame: 3 |
| Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2 |
| Match: Q8VE97 |
score: 86.7 |
e-value: 3e-16 |
Identity: 26.04% |
Span: 801bp (55.9%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 4 OS=Mus musculus GN=Sfrs4 PE=2 SV=1 |
| Match: Q13247 |
score: 85.9 |
e-value: 5e-16 |
Identity: 26.43% |
Span: 909bp (63.4%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 6 OS=Homo sapiens GN=SFRS6 PE=1 SV=2 |
| Match: Q08170 |
score: 84.3 |
e-value: 2e-15 |
Identity: 26.71% |
Span: 795bp (55.5%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 4 OS=Homo sapiens GN=SFRS4 PE=1 SV=2 |
| Match: Q13243 |
score: 77.4 |
e-value: 2e-13 |
Identity: 27.76% |
Span: 777bp (54.2%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 5 OS=Homo sapiens GN=SFRS5 PE=1 SV=1 |
| Match: Q10021 |
score: 77 |
e-value: 2e-13 |
Identity: 32.06% |
Span: 576bp (40.2%) |
Frame: 3 |
| Probable splicing factor, arginine/serine-rich 5 OS=Caenorhabditis elegans GN=rsp-5 |
| Match: Q09167 |
score: 74.7 |
e-value: 1e-12 |
Identity: 27.27% |
Span: 777bp (54.2%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 5 OS=Rattus norvegicus GN=Sfrs5 PE=2 SV=1 |
| Match: Q23120 |
score: 73.9 |
e-value: 2e-12 |
Identity: 28.96% |
Span: 825bp (57.6%) |
Frame: 3 |
| Probable splicing factor, arginine/serine-rich 2 OS=Caenorhabditis elegans GN=rsp-2 PE=2 SV=1 |
| Match: Q0VCY7 |
score: 72.4 |
e-value: 6e-12 |
Identity: 28.57% |
Span: 639bp (44.6%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 1 OS=Bos taurus GN=SFRS1 PE=2 SV=1 |
| Match: Q3YLA6 |
score: 72.4 |
e-value: 6e-12 |
Identity: 28.57% |
Span: 639bp (44.6%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 1 OS=Sus scrofa GN=SFRS1 PE=2 SV=3 |
| Match: Q6PDM2 |
score: 72.4 |
e-value: 6e-12 |
Identity: 28.57% |
Span: 639bp (44.6%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 1 OS=Mus musculus GN=Sfrs1 PE=1 SV=3 |
| Match: Q07955 |
score: 72.4 |
e-value: 6e-12 |
Identity: 28.57% |
Span: 639bp (44.6%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 1 OS=Homo sapiens GN=SFRS1 PE=1 SV=2 |
| Match: Q5R7H2 |
score: 72.4 |
e-value: 6e-12 |
Identity: 28.57% |
Span: 639bp (44.6%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 1 OS=Pongo abelii GN=SFRS1 PE=2 SV=3 |
| Match: Q5PPI1 |
score: 71.6 |
e-value: 1e-11 |
Identity: 28.99% |
Span: 663bp (46.3%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1 |
| Match: Q9D0B0 |
score: 71.2 |
e-value: 1e-11 |
Identity: 28.99% |
Span: 663bp (46.3%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1 |
| Match: Q13242 |
score: 70.5 |
e-value: 2e-11 |
Identity: 28.99% |
Span: 663bp (46.3%) |
Frame: 3 |
| Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1 |
| Match: Q5AI15 |
score: 69.3 |
e-value: 5e-11 |
Identity: 24.62% |
Span: 849bp (59.2%) |
Frame: 3 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1 |
| Match: Q6IQ97 |
score: 68.9 |
e-value: 7e-11 |
Identity: 25.7% |
Span: 684bp (47.7%) |
Frame: 3 |
| RNA-binding protein 4 OS=Danio rerio GN=rbm4 |
| Match: Q09511 |
score: 68.6 |
e-value: 9e-11 |
Identity: 33.51% |
Span: 513bp (35.8%) |
Frame: 3 |
| Probable splicing factor, arginine/serine-rich 4 OS=Caenorhabditis elegans GN=rsp-4 PE=2 SV=1 |
|
