| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|11385586|gb|AAG34873.1|AF261020_1 |
score: 506 |
e-value: 0 |
Identity: 90.25% |
Span: 831bp (56.2%) |
Frame: 2 |
| putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum] >gi11385590|gb|AAG34876.1|AF261021_1 putative chl... |
| Match: gi|11385602|gb|AAG34882.1|AF261027_1 |
score: 505 |
e-value: 5e-141 |
Identity: 90.58% |
Span: 828bp (56.0%) |
Frame: 2 |
| putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana tabacum] |
| Match: gi|11385596|gb|AAG34879.1|AF261024_1 |
score: 504 |
e-value: 0 |
Identity: 90.58% |
Span: 828bp (56.0%) |
Frame: 2 |
| putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum] |
| Match: gi|255552301|ref|XP_002517195.1| |
score: 432 |
e-value: 2e-166 |
Identity: 75.64% |
Span: 825bp (55.8%) |
Frame: 2 |
| dead box ATP-dependent RNA helicase, putative [Ricinus communis] >gi223543830|gb|EEF45358.1| dead box ATP-dependent R... |
| Match: gi|224111250|ref|XP_002315792.1| |
score: 429 |
e-value: 5e-130 |
Identity: 76.09% |
Span: 828bp (56.0%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222864832|gb|EEF01963.1| predicted protein [Populus trichocarpa] |
| Match: gi|270238967|emb|CBI26203.1| |
score: 416 |
e-value: 4e-114 |
Identity: 72.46% |
Span: 828bp (56.0%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225432566|ref|XP_002277780.1| |
score: 416 |
e-value: 4e-114 |
Identity: 72.46% |
Span: 828bp (56.0%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|217074248|gb|ACJ85484.1| |
score: 377 |
e-value: 1e-149 |
Identity: 68.25% |
Span: 822bp (55.6%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|143456767|sp|Q0JFN7.2|RH58_ORYSJ |
score: 359 |
e-value: 3e-144 |
Identity: 62.55% |
Span: 825bp (55.8%) |
Frame: 2 |
| RecName: Full=DEAD-box ATP-dependent RNA helicase 58, chloroplastic; Flags: Precursor |
| Match: gi|226509832|ref|NP_001147746.1| |
score: 340 |
e-value: 8e-138 |
Identity: 61.03% |
Span: 810bp (54.8%) |
Frame: 2 |
| ATP binding protein [Zea mays] >gi195613438|gb|ACG28549.1| ATP binding protein [Zea mays] |
| Match: gi|194699860|gb|ACF84014.1| |
score: 340 |
e-value: 7e-126 |
Identity: 61.03% |
Span: 810bp (54.8%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|11596133|gb|AAG38493.1|AF261032_1 |
score: 307 |
e-value: 4e-158 |
Identity: 86.93% |
Span: 528bp (35.7%) |
Frame: 2 |
| putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum] |
| Match: gi|11385586|gb|AAG34873.1|AF261020_1 |
score: 284 |
e-value: 0 |
Identity: 83.25% |
Span: 552bp (37.3%) |
Frame: 3 |
| putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum] >gi11385590|gb|AAG34876.1|AF261021_1 putative chl... |
| Match: gi|11596133|gb|AAG38493.1|AF261032_1 |
score: 276 |
e-value: 4e-158 |
Identity: 80.63% |
Span: 552bp (37.3%) |
Frame: 3 |
| putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum] |
| Match: gi|11385596|gb|AAG34879.1|AF261024_1 |
score: 276 |
e-value: 0 |
Identity: 80.63% |
Span: 552bp (37.3%) |
Frame: 3 |
| putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum] |
| Match: gi|222637690|gb|EEE67822.1| |
score: 272 |
e-value: 4e-118 |
Identity: 51.64% |
Span: 825bp (55.8%) |
Frame: 2 |
| hypothetical protein OsJ_25587 [Oryza sativa Japonica Group] |
| Match: gi|11385602|gb|AAG34882.1|AF261027_1 |
score: 214 |
e-value: 3e-53 |
Identity: 63.77% |
Span: 573bp (38.8%) |
Frame: 3 |
| putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana tabacum] |
| Match: gi|225432566|ref|XP_002277780.1| |
score: 195 |
e-value: 1e-47 |
Identity: 62.35% |
Span: 510bp (34.5%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|217074248|gb|ACJ85484.1| |
score: 178 |
e-value: 1e-149 |
Identity: 54.89% |
Span: 543bp (36.7%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|143456767|sp|Q0JFN7.2|RH58_ORYSJ |
score: 178 |
e-value: 3e-144 |
Identity: 72% |
Span: 375bp (25.4%) |
Frame: 3 |
| RecName: Full=DEAD-box ATP-dependent RNA helicase 58, chloroplastic; Flags: Precursor |
| Match: gi|255552301|ref|XP_002517195.1| |
score: 178 |
e-value: 2e-166 |
Identity: 72% |
Span: 375bp (25.4%) |
Frame: 3 |
| dead box ATP-dependent RNA helicase, putative [Ricinus communis] >gi223543830|gb|EEF45358.1| dead box ATP-dependent R... |
| Match: gi|222637690|gb|EEE67822.1| |
score: 178 |
e-value: 4e-118 |
Identity: 72% |
Span: 375bp (25.4%) |
Frame: 3 |
| hypothetical protein OsJ_25587 [Oryza sativa Japonica Group] |
| Match: gi|226509832|ref|NP_001147746.1| |
score: 175 |
e-value: 8e-138 |
Identity: 68.8% |
Span: 375bp (25.4%) |
Frame: 3 |
| ATP binding protein [Zea mays] >gi195613438|gb|ACG28549.1| ATP binding protein [Zea mays] |
| Match: gi|194699860|gb|ACF84014.1| |
score: 135 |
e-value: 7e-126 |
Identity: 69.7% |
Span: 297bp (20.1%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|224111250|ref|XP_002315792.1| |
score: 60.5 |
e-value: 5e-130 |
Identity: 77.14% |
Span: 105bp (7.1%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222864832|gb|EEF01963.1| predicted protein [Populus trichocarpa] |
|
| 468 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At5G19210.1 |
score: 387 |
e-value: 1e-107 |
Identity: 65.82% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative | chr5:6462102-6463689 FORWARD |
| Match: At5G19210.2 |
score: 387 |
e-value: 1e-107 |
Identity: 65.82% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative | chr5:6461446-6463689 FORWARD |
| Match: At5G19210.2 |
score: 181 |
e-value: 1e-45 |
Identity: 56.8% |
Span: 507bp (34.3%) |
Frame: 3 |
| DEAD/DEAH box helicase, putative | chr5:6461446-6463689 FORWARD |
| Match: At3G58510.3 |
score: 85.1 |
e-value: 1e-16 |
Identity: 27.92% |
Span: 696bp (47.1%) |
Frame: 2 |
| ATP-dependent helicase | chr3:21651585-21654441 FORWARD |
| Match: At3G58510.1 |
score: 85.1 |
e-value: 1e-16 |
Identity: 27.92% |
Span: 696bp (47.1%) |
Frame: 2 |
| DEAD box RNA helicase, putative (RH11) | chr3:21651585-21654441 FORWARD |
| Match: At3G58510.2 |
score: 85.1 |
e-value: 1e-16 |
Identity: 27.92% |
Span: 696bp (47.1%) |
Frame: 2 |
| DEAD box RNA helicase, putative (RH11) | chr3:21651585-21654441 FORWARD |
| Match: At3G58570.1 |
score: 83.2 |
e-value: 4e-16 |
Identity: 27.27% |
Span: 696bp (47.1%) |
Frame: 2 |
| DEAD box RNA helicase, putative | chr3:21668076-21671329 FORWARD |
| Match: At3G06480.1 |
score: 82.4 |
e-value: 6e-16 |
Identity: 27.23% |
Span: 696bp (47.1%) |
Frame: 2 |
| DEAD box RNA helicase, putative | chr3:1985703-1989672 REVERSE |
| Match: At2G42520.1 |
score: 82.4 |
e-value: 6e-16 |
Identity: 26.86% |
Span: 696bp (47.1%) |
Frame: 2 |
| DEAD box RNA helicase, putative | chr2:17712460-17715822 FORWARD |
| Match: At5G14610.1 |
score: 79 |
e-value: 7e-15 |
Identity: 27.23% |
Span: 696bp (47.1%) |
Frame: 2 |
| ATP binding / ATP-dependent helicase | chr5:4711274-4714716 FORWARD |
| Match: At3G01540.1 |
score: 77 |
e-value: 3e-14 |
Identity: 26.81% |
Span: 696bp (47.1%) |
Frame: 2 |
| Symbols: ATDRH1, DRH1 | DRH1 (DEAD box RNA helicase 1) | chr3:213084-216149 REVERSE |
| Match: At3G01540.4 |
score: 77 |
e-value: 3e-14 |
Identity: 26.81% |
Span: 696bp (47.1%) |
Frame: 2 |
| Symbols: ATDRH1, DRH1 | DRH1 (DEAD box RNA helicase 1) | chr3:213084-216149 REVERSE |
| Match: At3G01540.3 |
score: 77 |
e-value: 3e-14 |
Identity: 26.81% |
Span: 696bp (47.1%) |
Frame: 2 |
| Symbols: ATDRH1, DRH1 | DRH1 (DEAD box RNA helicase 1) | chr3:213084-216149 REVERSE |
| Match: At2G47330.1 |
score: 73.6 |
e-value: 2e-23 |
Identity: 28.3% |
Span: 786bp (53.2%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative | chr2:19436153-19438687 REVERSE |
| Match: At5G26742.2 |
score: 73.2 |
e-value: 4e-19 |
Identity: 23.9% |
Span: 801bp (54.2%) |
Frame: 2 |
| Symbols: EMB1138 | EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase | chr5:9285543-9288874 REVERSE |
| Match: At5G26742.1 |
score: 73.2 |
e-value: 4e-19 |
Identity: 23.9% |
Span: 801bp (54.2%) |
Frame: 2 |
| Symbols: EMB1138 | EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase | chr5:9285543-9288874 REVERSE |
| Match: At5G11200.1 |
score: 71.6 |
e-value: 1e-22 |
Identity: 24.91% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative | chr5:3567390-3570687 FORWARD |
| Match: At5G11170.2 |
score: 69.3 |
e-value: 2e-17 |
Identity: 24.56% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3554273-3556647 FORWARD |
| Match: At5G11170.1 |
score: 69.3 |
e-value: 7e-22 |
Identity: 24.56% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3553335-3556647 FORWARD |
| Match: At2G47330.1 |
score: 53.1 |
e-value: 2e-23 |
Identity: 32.28% |
Span: 366bp (24.8%) |
Frame: 3 |
| DEAD/DEAH box helicase, putative | chr2:19436153-19438687 REVERSE |
| Match: At5G11200.1 |
score: 52 |
e-value: 1e-22 |
Identity: 28.57% |
Span: 354bp (24.0%) |
Frame: 3 |
| DEAD/DEAH box helicase, putative | chr5:3567390-3570687 FORWARD |
| Match: At5G11170.1 |
score: 52 |
e-value: 7e-22 |
Identity: 28.57% |
Span: 354bp (24.0%) |
Frame: 3 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3553335-3556647 FORWARD |
| Match: At5G26742.2 |
score: 38.9 |
e-value: 4e-19 |
Identity: 32.39% |
Span: 183bp (12.4%) |
Frame: 3 |
| Symbols: EMB1138 | EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase | chr5:9285543-9288874 REVERSE |
| Match: At5G26742.1 |
score: 38.9 |
e-value: 4e-19 |
Identity: 32.39% |
Span: 183bp (12.4%) |
Frame: 3 |
| Symbols: EMB1138 | EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase | chr5:9285543-9288874 REVERSE |
| Match: At5G11170.2 |
score: 37.4 |
e-value: 2e-17 |
Identity: 29.89% |
Span: 258bp (17.5%) |
Frame: 3 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3554273-3556647 FORWARD |
|
| 18 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q3E9C3 |
score: 387 |
e-value: 1e-106 |
Identity: 65.82% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana GN=RH58 PE=2 SV=1 |
| Match: Q0JFN7 |
score: 359 |
e-value: 2e-145 |
Identity: 62.55% |
Span: 825bp (55.8%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2 |
| Match: Q3E9C3 |
score: 181 |
e-value: 1e-44 |
Identity: 56.8% |
Span: 507bp (34.3%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana GN=RH58 PE=2 SV=1 |
| Match: Q0JFN7 |
score: 178 |
e-value: 2e-145 |
Identity: 72% |
Span: 375bp (25.4%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2 |
| Match: Q65RG7 |
score: 103 |
e-value: 4e-30 |
Identity: 29.61% |
Span: 696bp (47.1%) |
Frame: 2 |
| ATP-dependent RNA helicase rhlB OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rhlB PE=3 SV=1 |
| Match: P96614 |
score: 96.3 |
e-value: 2e-30 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus subtilis GN=cshA PE=1 SV=2 |
| Match: A7EJY3 |
score: 96.3 |
e-value: 2e-30 |
Identity: 31.2% |
Span: 696bp (47.1%) |
Frame: 2 |
| ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1 |
| Match: Q9P6U9 |
score: 94.4 |
e-value: 1e-29 |
Identity: 30.77% |
Span: 696bp (47.1%) |
Frame: 2 |
| ATP-dependent RNA helicase ded-1 OS=Neurospora crassa GN=ded-1 PE=3 SV=1 |
| Match: Q63GX5 |
score: 94 |
e-value: 4e-32 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1 |
| Match: Q81VG0 |
score: 94 |
e-value: 4e-32 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1 |
| Match: A0R8U6 |
score: 94 |
e-value: 4e-32 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1 |
| Match: Q73EU1 |
score: 94 |
e-value: 4e-32 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1 |
| Match: Q6HPE6 |
score: 94 |
e-value: 4e-32 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis subsp. konkukian GN=cshA PE=3 SV=1 |
| Match: Q81IT9 |
score: 94 |
e-value: 4e-32 |
Identity: 26.87% |
Span: 879bp (59.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2 |
| Match: Q0UWA6 |
score: 93.2 |
e-value: 1e-29 |
Identity: 29.06% |
Span: 696bp (47.1%) |
Frame: 2 |
| ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum GN=DED1 PE=3 SV=1 |
| Match: Q73EU1 |
score: 65.5 |
e-value: 4e-32 |
Identity: 35.9% |
Span: 234bp (15.8%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1 |
| Match: Q6HPE6 |
score: 65.5 |
e-value: 4e-32 |
Identity: 35.9% |
Span: 234bp (15.8%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis subsp. konkukian GN=cshA PE=3 SV=1 |
| Match: A0R8U6 |
score: 65.5 |
e-value: 4e-32 |
Identity: 35.9% |
Span: 234bp (15.8%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1 |
| Match: Q63GX5 |
score: 65.5 |
e-value: 4e-32 |
Identity: 35.9% |
Span: 234bp (15.8%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1 |
| Match: Q81IT9 |
score: 65.5 |
e-value: 4e-32 |
Identity: 35.9% |
Span: 234bp (15.8%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2 |
| Match: Q81VG0 |
score: 65.5 |
e-value: 4e-32 |
Identity: 35.9% |
Span: 234bp (15.8%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1 |
| Match: Q0UWA6 |
score: 57.8 |
e-value: 1e-29 |
Identity: 32.8% |
Span: 324bp (21.9%) |
Frame: 3 |
| ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum GN=DED1 PE=3 SV=1 |
| Match: P96614 |
score: 57.4 |
e-value: 2e-30 |
Identity: 29.63% |
Span: 243bp (16.4%) |
Frame: 3 |
| DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus subtilis GN=cshA PE=1 SV=2 |
| Match: A7EJY3 |
score: 57 |
e-value: 2e-30 |
Identity: 30.4% |
Span: 324bp (21.9%) |
Frame: 3 |
| ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1 |
| Match: Q65RG7 |
score: 48.5 |
e-value: 4e-30 |
Identity: 33.64% |
Span: 312bp (21.1%) |
Frame: 3 |
| ATP-dependent RNA helicase rhlB OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rhlB PE=3 SV=1 |
|
| 328 lower scoring hits censored -- only 25 best hits are stored. |