| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|157344045|emb|CAO68978.1| |
score: 492 |
e-value: 3e-137 |
Identity: 70.38% |
Span: 1020bp (68.3%) |
Frame: 2 |
| unnamed |
| Match: gi|42572641|ref|NP_974416.1| |
score: 485 |
e-value: 5e-135 |
Identity: 65.83% |
Span: 1068bp (71.5%) |
Frame: 2 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi229891781|sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA ps... |
| Match: gi|10045559|emb|CAC07917.1| |
score: 479 |
e-value: 2e-133 |
Identity: 64.85% |
Span: 1068bp (71.5%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|125585873|gb|EAZ26537.1| |
score: 449 |
e-value: 3e-124 |
Identity: 59.95% |
Span: 1149bp (77.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|218192587|gb|EEC75014.1| |
score: 420 |
e-value: 2e-115 |
Identity: 58.93% |
Span: 1098bp (73.5%) |
Frame: 2 |
| hypothetical protein OsI_11092 [Oryza sativa Indica Group] |
| Match: gi|195621906|gb|ACG32783.1| |
score: 418 |
e-value: 6e-115 |
Identity: 60% |
Span: 1044bp (69.9%) |
Frame: 2 |
| RNA binding protein [Zea mays] |
| Match: gi|22331748|ref|NP_190794.2| |
score: 383 |
e-value: 3e-104 |
Identity: 66.9% |
Span: 840bp (56.3%) |
Frame: 2 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi56744228|gb|AAW28554.1| At3g52260 [Arabidopsis thaliana] |
| Match: gi|17978940|gb|AAL47436.1| |
score: 380 |
e-value: 2e-103 |
Identity: 66.55% |
Span: 840bp (56.3%) |
Frame: 2 |
| AT3g52260/T25B15_30 [Arabidopsis thaliana] |
| Match: gi|168061155|ref|XP_001782556.1| |
score: 340 |
e-value: 2e-91 |
Identity: 51.52% |
Span: 1026bp (68.7%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162665963|gb|EDQ52631.1| predicted protein [Physcomitrella... |
| Match: gi|194696406|gb|ACF82287.1| |
score: 291 |
e-value: 8e-77 |
Identity: 64.57% |
Span: 663bp (44.4%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|158334165|ref|YP_001515337.1| |
score: 248 |
e-value: 8e-64 |
Identity: 40.97% |
Span: 1035bp (69.3%) |
Frame: 2 |
| RluA family pseudouridine synthase [Acaryochloris marina MBIC11017] >gi158304406|gb|ABW26023.1| pseudouridine synthas... |
| Match: gi|218442079|ref|YP_002380408.1| |
score: 247 |
e-value: 2e-63 |
Identity: 43.35% |
Span: 1035bp (69.3%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Cyanothece sp. PCC 7424] >gi218174807|gb|ACK73540.1| pseudouridine synthase, Rlu... |
| Match: gi|126657910|ref|ZP_01729063.1| |
score: 241 |
e-value: 2e-61 |
Identity: 42.77% |
Span: 996bp (66.7%) |
Frame: 2 |
| probable pseudouridine synthase [Cyanothece sp. CCY0110] >gi126620850|gb|EAZ91566.1| probable pseudouridine synthase ... |
| Match: gi|67924151|ref|ZP_00517595.1| |
score: 241 |
e-value: 2e-61 |
Identity: 41.64% |
Span: 1023bp (68.5%) |
Frame: 2 |
| Pseudouridine synthase, RluD [Crocosphaera watsonii WH 8501] >gi67854003|gb|EAM49318.1| Pseudouridine synthase, RluD ... |
| Match: gi|196258801|ref|ZP_03157334.1| |
score: 238 |
e-value: 1e-60 |
Identity: 43.02% |
Span: 1032bp (69.1%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Cyanothece sp. PCC 7822] >gi196200121|gb|EDX94943.1| pseudouridine synthase, Rlu... |
| Match: gi|159029331|emb|CAO90197.1| |
score: 237 |
e-value: 2e-60 |
Identity: 42.74% |
Span: 1053bp (70.5%) |
Frame: 2 |
| unnamed protein product [Microcystis aeruginosa PCC 7806] |
| Match: gi|218248702|ref|YP_002374073.1| |
score: 232 |
e-value: 6e-59 |
Identity: 42.77% |
Span: 996bp (66.7%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Cyanothece sp. PCC 8801] >gi218169180|gb|ACK67917.1| pseudouridine synthase, Rlu... |
| Match: gi|172038568|ref|YP_001805069.1| |
score: 231 |
e-value: 1e-58 |
Identity: 40.65% |
Span: 1011bp (67.7%) |
Frame: 2 |
| pseudouridine synthase [Cyanothece sp. ATCC 51142] >gi171700022|gb|ACB53003.1| probable pseudouridine synthase [Cyano... |
| Match: gi|196243107|ref|ZP_03141837.1| |
score: 231 |
e-value: 2e-58 |
Identity: 42.47% |
Span: 996bp (66.7%) |
Frame: 2 |
| pseudouridine |
| Match: gi|196239587|ref|ZP_03138359.1| |
score: 230 |
e-value: 3e-58 |
Identity: 39.88% |
Span: 1023bp (68.5%) |
Frame: 2 |
| pseudouridine |
| Match: gi|166364334|ref|YP_001656607.1| |
score: 229 |
e-value: 4e-58 |
Identity: 42.07% |
Span: 1041bp (69.7%) |
Frame: 2 |
| pseudouridine synthase [Microcystis aeruginosa NIES-843] >gi166086707|dbj|BAG01415.1| pseudouridine synthase [Microcy... |
| Match: gi|159482266|ref|XP_001699192.1| |
score: 226 |
e-value: 3e-57 |
Identity: 39.88% |
Span: 1008bp (67.5%) |
Frame: 2 |
| pseudouridine |
| Match: gi|209523615|ref|ZP_03272169.1| |
score: 220 |
e-value: 2e-55 |
Identity: 38.44% |
Span: 1038bp (69.5%) |
Frame: 2 |
| pseudouridine |
| Match: gi|196190587|gb|EDX85551.1| |
score: 205 |
e-value: 8e-51 |
Identity: 37.64% |
Span: 1032bp (69.1%) |
Frame: 2 |
| pseudouridine |
| Match: gi|116624899|ref|YP_827055.1| |
score: 204 |
e-value: 2e-50 |
Identity: 38.89% |
Span: 1026bp (68.7%) |
Frame: 2 |
| pseudouridine |
| Match: gi|37519752|ref|NP_923129.1| |
score: 200 |
e-value: 2e-49 |
Identity: 36.36% |
Span: 1023bp (68.5%) |
Frame: 2 |
| gi|37519752|ref|NP_923129.1| probable pseudouridine synthase [Gloeobacter violaceus] gi|35210743|dbj|BAC88124.1| gll0... |
| Match: gi|116750307|ref|YP_846994.1| |
score: 200 |
e-value: 3e-49 |
Identity: 36.39% |
Span: 1047bp (70.1%) |
Frame: 2 |
| pseudouridine |
| Match: gi|94986325|ref|YP_605689.1| |
score: 199 |
e-value: 4e-49 |
Identity: 36.68% |
Span: 1047bp (70.1%) |
Frame: 2 |
| Pseudouridine |
| Match: gi|16329580|ref|NP_440308.1| |
score: 195 |
e-value: 1e-47 |
Identity: 40.18% |
Span: 984bp (65.9%) |
Frame: 2 |
| gi|16329580|ref|NP_440308.1| hypothetical protein [Synechocystis sp. PCC 6803] gi|3915463|sp|P72970|YF92_SYNY3 Hypoth... |
| Match: gi|15806687|ref|NP_295407.1| |
score: 193 |
e-value: 3e-47 |
Identity: 35.26% |
Span: 1059bp (70.9%) |
Frame: 2 |
| gi|15806687|ref|NP_295407.1| pseudouridine synthase, putative [Deinococcus radiodurans] gi|7473651|pir||B75366 probab... |
| Match: gi|170078760|ref|YP_001735398.1| |
score: 185 |
e-value: 8e-45 |
Identity: 34.98% |
Span: 969bp (64.9%) |
Frame: 2 |
| putative |
| Match: gi|33864307|ref|NP_895867.1| |
score: 185 |
e-value: 8e-45 |
Identity: 38.36% |
Span: 1050bp (70.3%) |
Frame: 2 |
| gi|33864307|ref|NP_895867.1| Pseudouridine synthase [Prochlorococcus marinus str. MIT 9313] gi|33641087|emb|CAE22216.... |
| Match: gi|124024405|ref|YP_001018712.1| |
score: 184 |
e-value: 2e-44 |
Identity: 38.08% |
Span: 1050bp (70.3%) |
Frame: 2 |
| Pseudouridine |
| Match: gi|108762448|ref|YP_633384.1| |
score: 182 |
e-value: 5e-44 |
Identity: 35.14% |
Span: 1044bp (69.9%) |
Frame: 2 |
| pseudouridine |
| Match: gi|108707582|gb|ABF95377.1| |
score: 178 |
e-value: 1e-42 |
Identity: 59.62% |
Span: 453bp (30.3%) |
Frame: 2 |
| pseudouridine |
| Match: gi|115375687|ref|ZP_01462942.1| |
score: 172 |
e-value: 9e-41 |
Identity: 33.91% |
Span: 1032bp (69.1%) |
Frame: 2 |
| ribosomal |
| Match: gi|197625682|gb|EDY38241.1| |
score: 168 |
e-value: 1e-39 |
Identity: 35.85% |
Span: 1026bp (68.7%) |
Frame: 2 |
| ribosomal |
| Match: gi|87300869|ref|ZP_01083711.1| |
score: 166 |
e-value: 4e-39 |
Identity: 35.75% |
Span: 1029bp (68.9%) |
Frame: 2 |
| Pseudouridine |
| Match: gi|115452369|ref|NP_001049785.1| |
score: 151 |
e-value: 2e-34 |
Identity: 62.81% |
Span: 348bp (23.3%) |
Frame: 2 |
| Os03g0288500 |
| Match: gi|87123579|ref|ZP_01079430.1| |
score: 147 |
e-value: 2e-33 |
Identity: 33.24% |
Span: 1017bp (68.1%) |
Frame: 2 |
| probable |
| Match: gi|116073981|ref|ZP_01471243.1| |
score: 143 |
e-value: 4e-32 |
Identity: 29.41% |
Span: 1038bp (69.5%) |
Frame: 2 |
| probable |
| Match: gi|78185673|ref|YP_378107.1| |
score: 135 |
e-value: 1e-29 |
Identity: 30.17% |
Span: 1023bp (68.5%) |
Frame: 2 |
| probable |
| Match: gi|148240644|ref|YP_001226031.1| |
score: 133 |
e-value: 5e-29 |
Identity: 31.72% |
Span: 969bp (64.9%) |
Frame: 2 |
| Pseudouridylate |
| Match: gi|116072039|ref|ZP_01469307.1| |
score: 132 |
e-value: 1e-28 |
Identity: 31.42% |
Span: 972bp (65.1%) |
Frame: 2 |
| probable |
| Match: gi|218278496|ref|ZP_03486694.1| |
score: 130 |
e-value: 3e-28 |
Identity: 32.95% |
Span: 783bp (52.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|47096862|ref|ZP_00234442.1| |
score: 129 |
e-value: 7e-28 |
Identity: 33.33% |
Span: 813bp (54.5%) |
Frame: 2 |
| gi|47096862|ref|ZP_00234442.1| ribosomal large subunit pseudouridine synthase, RluD subfamily [Listeria monocytogenes... |
| Match: gi|116873677|ref|YP_850458.1| |
score: 129 |
e-value: 5e-28 |
Identity: 32.18% |
Span: 852bp (57.1%) |
Frame: 2 |
| ribosomal |
| Match: gi|33866818|ref|NP_898377.1| |
score: 127 |
e-value: 2e-27 |
Identity: 31.14% |
Span: 981bp (65.7%) |
Frame: 2 |
| gi|33866818|ref|NP_898377.1| probable pseudouridine synthase [Synechococcus sp. WH 8102] gi|33639419|emb|CAE08803.1| ... |
| Match: gi|46908477|ref|YP_014866.1| |
score: 127 |
e-value: 3e-27 |
Identity: 32.97% |
Span: 813bp (54.5%) |
Frame: 2 |
| gi|46908477|ref|YP_014866.1| ribosomal large subunit pseudouridine synthase, RluD subfamily [Listeria monocytogenes s... |
| Match: gi|194699086|gb|ACF83627.1| |
score: 127 |
e-value: 3e-27 |
Identity: 65.26% |
Span: 285bp (19.1%) |
Frame: 2 |
| unknown |
| Match: gi|16804283|ref|NP_465768.1| |
score: 127 |
e-value: 3e-27 |
Identity: 32.97% |
Span: 813bp (54.5%) |
Frame: 2 |
| gi|16804283|ref|NP_465768.1| similar to putative ribosomal large subunit pseudouridine synthase [Listeria monocytogen... |
| Match: gi|160938833|ref|ZP_02086184.1| |
score: 127 |
e-value: 3e-27 |
Identity: 31.06% |
Span: 792bp (53.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|77920540|ref|YP_358355.1| |
score: 127 |
e-value: 2e-27 |
Identity: 31.37% |
Span: 930bp (62.3%) |
Frame: 2 |
| ribosomal |
| Match: gi|108707581|gb|ABF95376.1| |
score: 127 |
e-value: 2e-27 |
Identity: 66.33% |
Span: 279bp (18.7%) |
Frame: 2 |
| pseudouridine |
| Match: gi|166367953|ref|YP_001660226.1| |
score: 126 |
e-value: 6e-27 |
Identity: 31.41% |
Span: 912bp (61.1%) |
Frame: 2 |
| ribosomal large subunit pseudouridine synthase D [Microcystis aeruginosa NIES-843] >gi166090326|dbj|BAG05034.1| ribos... |
| Match: gi|16801409|ref|NP_471677.1| |
score: 126 |
e-value: 4e-27 |
Identity: 30.09% |
Span: 972bp (65.1%) |
Frame: 2 |
| gi|16801409|ref|NP_471677.1| similar to putative ribosomal large subunit pseudouridine synthase [Listeria innocua] gi... |
| Match: gi|199598373|ref|ZP_03211792.1| |
score: 125 |
e-value: 1e-26 |
Identity: 31.86% |
Span: 939bp (62.9%) |
Frame: 2 |
| Pseudouridylate |
| Match: gi|117925422|ref|YP_866039.1| |
score: 124 |
e-value: 2e-26 |
Identity: 30.6% |
Span: 930bp (62.3%) |
Frame: 2 |
| pseudouridine |
| Match: gi|28378455|ref|NP_785347.1| |
score: 124 |
e-value: 2e-26 |
Identity: 31.09% |
Span: 921bp (61.7%) |
Frame: 2 |
| gi|28378455|ref|NP_785347.1| pseudouridylate synthase [Lactobacillus plantarum WCFS1] gi|28271291|emb|CAD64195.1| pse... |
| Match: gi|210612741|ref|ZP_03289456.1| |
score: 124 |
e-value: 2e-26 |
Identity: 30.49% |
Span: 906bp (60.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|148262954|ref|YP_001229660.1| |
score: 124 |
e-value: 2e-26 |
Identity: 30.56% |
Span: 1002bp (67.1%) |
Frame: 2 |
| pseudouridine |
| Match: gi|217963594|ref|YP_002349272.1| |
score: 124 |
e-value: 2e-26 |
Identity: 32.61% |
Span: 813bp (54.5%) |
Frame: 2 |
| ribosomal |
| Match: gi|85373063|ref|YP_457125.1| |
score: 122 |
e-value: 8e-26 |
Identity: 30.65% |
Span: 918bp (61.5%) |
Frame: 2 |
| pseudouridine |
| Match: gi|218781210|ref|YP_002432528.1| |
score: 122 |
e-value: 1e-25 |
Identity: 33.66% |
Span: 906bp (60.7%) |
Frame: 2 |
| pseudouridine |
| Match: gi|116627406|ref|YP_820025.1| |
score: 122 |
e-value: 8e-26 |
Identity: 29.68% |
Span: 924bp (61.9%) |
Frame: 2 |
| Pseudouridylate |
| Match: gi|126664287|ref|ZP_01735278.1| |
score: 122 |
e-value: 8e-26 |
Identity: 31.97% |
Span: 795bp (53.2%) |
Frame: 2 |
| ribosomal |
| Match: gi|159029548|emb|CAO87700.1| |
score: 121 |
e-value: 2e-25 |
Identity: 30.77% |
Span: 912bp (61.1%) |
Frame: 2 |
| rluD [Microcystis aeruginosa PCC 7806] |
| Match: gi|78356492|ref|YP_387941.1| |
score: 121 |
e-value: 2e-25 |
Identity: 32.07% |
Span: 1002bp (67.1%) |
Frame: 2 |
| pseudouridine |
| Match: gi|85860531|ref|YP_462733.1| |
score: 120 |
e-value: 4e-25 |
Identity: 29.82% |
Span: 1008bp (67.5%) |
Frame: 2 |
| ribosomal |
| Match: gi|90961803|ref|YP_535719.1| |
score: 120 |
e-value: 2e-25 |
Identity: 29.45% |
Span: 936bp (62.7%) |
Frame: 2 |
| Ribosomal |
| Match: gi|146283956|ref|YP_001174109.1| |
score: 120 |
e-value: 4e-25 |
Identity: 31.82% |
Span: 906bp (60.7%) |
Frame: 2 |
| pseudouridine |
| Match: gi|116873278|ref|YP_850059.1| |
score: 119 |
e-value: 7e-25 |
Identity: 31.07% |
Span: 909bp (60.9%) |
Frame: 2 |
| ribosomal |
| Match: gi|49083826|gb|AAT51150.1| |
score: 119 |
e-value: 7e-25 |
Identity: 31.21% |
Span: 960bp (64.3%) |
Frame: 2 |
| PA4544 |
| Match: gi|42519111|ref|NP_965041.1| |
score: 119 |
e-value: 7e-25 |
Identity: 32.08% |
Span: 795bp (53.2%) |
Frame: 2 |
| gi|42519111|ref|NP_965041.1| ribosomal large subunit pseudouridine synthase D [Lactobacillus johnsonii NCC 533] >gi|4... |
| Match: gi|55820603|ref|YP_139045.1| |
score: 119 |
e-value: 9e-25 |
Identity: 29.03% |
Span: 924bp (61.9%) |
Frame: 2 |
| gi|55820603|ref|YP_139045.1| ribosomal large subunit pseudouridine synthase D [Streptococcus thermophilus LMG 18311] ... |
| Match: gi|32423742|gb|AAP81266.1| |
score: 119 |
e-value: 7e-25 |
Identity: 31.21% |
Span: 960bp (64.3%) |
Frame: 2 |
| gi|32423742|gb|AAP81266.1| pseudouridine synthase [Pseudomonas aeruginosa] |
| Match: gi|218251140|ref|ZP_03472507.1| |
score: 119 |
e-value: 9e-25 |
Identity: 31.01% |
Span: 915bp (61.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|56460291|ref|YP_155572.1| |
score: 119 |
e-value: 5e-25 |
Identity: 30.2% |
Span: 1035bp (69.3%) |
Frame: 2 |
| 23S |
| Match: gi|189423553|ref|YP_001950730.1| |
score: 119 |
e-value: 9e-25 |
Identity: 30.35% |
Span: 915bp (61.3%) |
Frame: 2 |
| pseudouridine |
| Match: gi|110004584|emb|CAK98921.1| |
score: 119 |
e-value: 7e-25 |
Identity: 32.72% |
Span: 801bp (53.7%) |
Frame: 2 |
| probable |
| Match: gi|166031852|ref|ZP_02234681.1| |
score: 119 |
e-value: 7e-25 |
Identity: 30.27% |
Span: 783bp (52.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|94987255|ref|YP_595188.1| |
score: 119 |
e-value: 9e-25 |
Identity: 32% |
Span: 885bp (59.3%) |
Frame: 2 |
| Pseudouridylate |
| Match: gi|54310131|ref|YP_131151.1| |
score: 119 |
e-value: 7e-25 |
Identity: 29.58% |
Span: 906bp (60.7%) |
Frame: 2 |
| 23S |
| Match: gi|107099793|ref|ZP_01363711.1| |
score: 119 |
e-value: 7e-25 |
Identity: 31.21% |
Span: 960bp (64.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|15599740|ref|NP_253234.1| |
score: 119 |
e-value: 7e-25 |
Identity: 31.21% |
Span: 960bp (64.3%) |
Frame: 2 |
| gi|15599740|ref|NP_253234.1| pseudouridine synthase [Pseudomonas aeruginosa PA01] gi|12231021|sp|P33640|RLUD_PSEAE Ri... |
| Match: gi|16331032|ref|NP_441760.1| |
score: 119 |
e-value: 9e-25 |
Identity: 31.44% |
Span: 786bp (52.6%) |
Frame: 2 |
| gi|16331032|ref|NP_441760.1| hypothetical protein [Synechocystis sp. PCC 6803] gi|3915482|sp|P74346|YG29_SYNY3 Hypoth... |
| Match: gi|167758164|ref|ZP_02430291.1| |
score: 118 |
e-value: 1e-24 |
Identity: 30% |
Span: 810bp (54.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|81428560|ref|YP_395560.1| |
score: 118 |
e-value: 2e-24 |
Identity: 30.16% |
Span: 912bp (61.1%) |
Frame: 2 |
| Pseudouridylate |
| Match: gi|148261702|ref|YP_001235829.1| |
score: 118 |
e-value: 1e-24 |
Identity: 32.8% |
Span: 921bp (61.7%) |
Frame: 2 |
| RluA |
| Match: gi|20807974|ref|NP_623145.1| |
score: 118 |
e-value: 1e-24 |
Identity: 32.57% |
Span: 783bp (52.4%) |
Frame: 2 |
| gi|20807974|ref|NP_623145.1| Pseudouridylate synthase, 23S RNA-specific [Thermoanaerobacter tengcongensis] gi|2051654... |
| Match: gi|163790406|ref|ZP_02184837.1| |
score: 118 |
e-value: 1e-24 |
Identity: 31.2% |
Span: 795bp (53.2%) |
Frame: 2 |
| Pseudouridylate |
| Match: gi|158425878|ref|YP_001527170.1| |
score: 118 |
e-value: 1e-24 |
Identity: 30.68% |
Span: 1023bp (68.5%) |
Frame: 2 |
| pseudouridine |
| Match: gi|194468025|ref|ZP_03074011.1| |
score: 118 |
e-value: 1e-24 |
Identity: 30.46% |
Span: 960bp (64.3%) |
Frame: 2 |
| pseudouridine |
| Match: gi|153853142|ref|ZP_01994551.1| |
score: 118 |
e-value: 2e-24 |
Identity: 30.27% |
Span: 783bp (52.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|55822493|ref|YP_140934.1| |
score: 117 |
e-value: 2e-24 |
Identity: 29.24% |
Span: 897bp (60.1%) |
Frame: 2 |
| ribosomal |
| Match: gi|148545913|ref|YP_001266015.1| |
score: 117 |
e-value: 2e-24 |
Identity: 30.18% |
Span: 954bp (63.9%) |
Frame: 2 |
| pseudouridine |
| Match: gi|214035544|gb|EEB76243.1| |
score: 117 |
e-value: 2e-24 |
Identity: 31.29% |
Span: 882bp (59.1%) |
Frame: 2 |
| pseudouridine |
| Match: gi|195978250|ref|YP_002123494.1| |
score: 117 |
e-value: 2e-24 |
Identity: 31.52% |
Span: 828bp (55.5%) |
Frame: 2 |
| ribosomal |
| Match: gi|16801023|ref|NP_471291.1| |
score: 117 |
e-value: 2e-24 |
Identity: 30.52% |
Span: 906bp (60.7%) |
Frame: 2 |
| gi|16801023|ref|NP_471291.1| similar to conserved hypothetical proteins [Listeria innocua] gi|25322408|pir||AC1677 co... |
| Match: gi|219547619|gb|EED24667.1| |
score: 117 |
e-value: 2e-24 |
Identity: 30.03% |
Span: 894bp (59.9%) |
Frame: 2 |
| ribosomal |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At3G52260.2 |
score: 485 |
e-value: 3e-137 |
Identity: 65.83% |
Span: 1068bp (71.5%) |
Frame: 2 |
| pseudouridine synthase family protein | chr3:19394430-19397418 REVERSE |
| Match: At3G52260.1 |
score: 383 |
e-value: 2e-106 |
Identity: 66.9% |
Span: 840bp (56.3%) |
Frame: 2 |
| pseudouridine synthase family protein | chr3:19394961-19397418 REVERSE |
| Match: At1G76050.2 |
score: 97.8 |
e-value: 2e-20 |
Identity: 25.71% |
Span: 1008bp (67.5%) |
Frame: 2 |
| pseudouridine synthase family protein | chr1:28545752-28547720 FORWARD |
| Match: At5G51140.1 |
score: 78.2 |
e-value: 1e-14 |
Identity: 26.52% |
Span: 798bp (53.4%) |
Frame: 2 |
| pseudouridine synthase family protein | chr5:20801503-20804019 REVERSE |
|
| swissprot [blastx] | Showing best 77 hits recorded |
| Match: P72970 |
score: 195 |
e-value: 6e-49 |
Identity: 40.18% |
Span: 984bp (65.9%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase slr1592 OS=Synechocystis sp. (strain PCC 6803) GN=slr1592 PE=3 SV=1 |
| Match: P33640 |
score: 119 |
e-value: 5e-26 |
Identity: 31.21% |
Span: 960bp (64.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Pseudomonas aeruginosa GN=rluD PE=3 SV=2 |
| Match: P74346 |
score: 119 |
e-value: 6e-26 |
Identity: 31.44% |
Span: 786bp (52.6%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase slr1629 OS=Synechocystis sp. (strain PCC 6803) GN=slr1629 PE=3 SV=1 |
| Match: Q8DEV0 |
score: 114 |
e-value: 2e-24 |
Identity: 29.56% |
Span: 927bp (62.1%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio vulnificus GN=rluD PE=3 SV=1 |
| Match: Q87S65 |
score: 112 |
e-value: 6e-24 |
Identity: 29.3% |
Span: 927bp (62.1%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio parahaemolyticus GN=rluD PE=3 SV=1 |
| Match: P50513 |
score: 112 |
e-value: 4e-24 |
Identity: 29.74% |
Span: 795bp (53.2%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis GN=rluD PE=3 SV=2 |
| Match: P44445 |
score: 110 |
e-value: 3e-23 |
Identity: 31.3% |
Span: 783bp (52.4%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Haemophilus influenzae GN=rluD PE=3 SV=1 |
| Match: Q82WZ5 |
score: 110 |
e-value: 2e-23 |
Identity: 32.01% |
Span: 834bp (55.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Nitrosomonas europaea GN=rluD PE=3 SV=1 |
| Match: P54604 |
score: 110 |
e-value: 2e-23 |
Identity: 28.24% |
Span: 786bp (52.6%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase yhcT OS=Bacillus subtilis GN=yhcT PE=3 SV=2 |
| Match: O67638 |
score: 109 |
e-value: 4e-23 |
Identity: 30.27% |
Span: 864bp (57.9%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus GN=aq_1758 PE=3 SV=1 |
| Match: Q9KU20 |
score: 107 |
e-value: 2e-22 |
Identity: 28.53% |
Span: 927bp (62.1%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio cholerae GN=rluD PE=3 SV=1 |
| Match: Q9JVB6 |
score: 107 |
e-value: 2e-22 |
Identity: 31.2% |
Span: 792bp (53.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup A GN=rluD PE=3 SV=1 |
| Match: Q9CKA6 |
score: 107 |
e-value: 2e-22 |
Identity: 28.17% |
Span: 954bp (63.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Pasteurella multocida GN=rluD PE=3 SV=1 |
| Match: Q9K0B0 |
score: 106 |
e-value: 4e-22 |
Identity: 30.83% |
Span: 792bp (53.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup B GN=rluD PE=3 SV=1 |
| Match: Q9L7A7 |
score: 106 |
e-value: 3e-22 |
Identity: 27.8% |
Span: 909bp (60.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Haemophilus ducreyi GN=rluD PE=3 SV=2 |
| Match: Q45480 |
score: 103 |
e-value: 3e-21 |
Identity: 27.42% |
Span: 912bp (61.1%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase ylyB OS=Bacillus subtilis GN=ylyB PE=3 SV=3 |
| Match: Q45826 |
score: 102 |
e-value: 7e-21 |
Identity: 30.6% |
Span: 804bp (53.9%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase Caur_0901 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-... |
| Match: Q8K9E9 |
score: 102 |
e-value: 4e-21 |
Identity: 28.75% |
Span: 954bp (63.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rluD PE=3 SV=1 |
| Match: P57481 |
score: 101 |
e-value: 1e-20 |
Identity: 26.79% |
Span: 966bp (64.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rluD PE=3 SV=1 |
| Match: Q8ZBV7 |
score: 96.3 |
e-value: 4e-19 |
Identity: 29.03% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Yersinia pestis GN=rluD PE=3 SV=1 |
| Match: P65834 |
score: 96.3 |
e-value: 4e-19 |
Identity: 27.83% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli O6 GN=rluD PE=3 SV=2 |
| Match: P65835 |
score: 96.3 |
e-value: 4e-19 |
Identity: 27.83% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Shigella flexneri GN=rluD PE=3 SV=2 |
| Match: P33643 |
score: 95.9 |
e-value: 5e-19 |
Identity: 27.51% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli (strain K12) GN=rluD PE=1 SV=4 |
| Match: Q8X9F0 |
score: 95.1 |
e-value: 9e-19 |
Identity: 27.51% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli O157:H7 GN=rluD PE=1 SV=3 |
| Match: P65836 |
score: 94 |
e-value: 2e-18 |
Identity: 26.86% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhimurium GN=rluD PE=1 SV=2 |
| Match: P65837 |
score: 94 |
e-value: 2e-18 |
Identity: 26.86% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhi GN=rluD PE=3 SV=2 |
| Match: Q9KQH0 |
score: 92.8 |
e-value: 5e-18 |
Identity: 30.19% |
Span: 789bp (52.8%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Vibrio cholerae GN=rluC |
| Match: P75485 |
score: 92.8 |
e-value: 5e-18 |
Identity: 26.64% |
Span: 912bp (61.1%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumoniae GN=MPN_292 |
| Match: Q8PHN2 |
score: 92 |
e-value: 8e-18 |
Identity: 27.9% |
Span: 918bp (61.5%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri GN=rluD PE=3 SV=1 |
| Match: O50310 |
score: 91.7 |
e-value: 1e-17 |
Identity: 29.18% |
Span: 816bp (54.7%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase in bchI 5'region OS=Chlorobium vibrioforme |
| Match: O16686 |
score: 91.3 |
e-value: 1e-17 |
Identity: 32.35% |
Span: 714bp (47.8%) |
Frame: 2 |
| Uncharacterized protein K07E8.7 OS=Caenorhabditis elegans GN=K07E8.7 PE=2 SV=1 |
| Match: Q9CK02 |
score: 90.9 |
e-value: 2e-17 |
Identity: 28.57% |
Span: 810bp (54.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Pasteurella multocida GN=rluA |
| Match: Q8P682 |
score: 89 |
e-value: 7e-17 |
Identity: 27.51% |
Span: 795bp (53.2%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris GN=rluD PE=3 SV=1 |
| Match: Q8XYX8 |
score: 89 |
e-value: 7e-17 |
Identity: 28.84% |
Span: 792bp (53.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Ralstonia solanacearum GN=rluD |
| Match: P59838 |
score: 87 |
e-value: 2e-16 |
Identity: 27.1% |
Span: 906bp (60.7%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Blochmannia floridanus GN=rluD |
| Match: Q89AD9 |
score: 87 |
e-value: 2e-16 |
Identity: 24.68% |
Span: 912bp (61.1%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rluD |
| Match: Q8FL93 |
score: 86.3 |
e-value: 4e-16 |
Identity: 28.04% |
Span: 804bp (53.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Escherichia coli O6 GN=rluA |
| Match: O31613 |
score: 86.3 |
e-value: 4e-16 |
Identity: 27.27% |
Span: 792bp (53.0%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase yjbO OS=Bacillus subtilis GN=yjbO |
| Match: P70870 |
score: 86.3 |
e-value: 4e-16 |
Identity: 31.16% |
Span: 597bp (40.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Borrelia burgdorferi GN=rluD |
| Match: P0AA38 |
score: 85.9 |
e-value: 6e-16 |
Identity: 27.68% |
Span: 804bp (53.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Shigella flexneri GN=rluA |
| Match: P0AA37 |
score: 85.9 |
e-value: 6e-16 |
Identity: 27.68% |
Span: 804bp (53.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Escherichia coli (strain K12) GN=rluA |
| Match: Q12069 |
score: 85.5 |
e-value: 7e-16 |
Identity: 27% |
Span: 783bp (52.4%) |
Frame: 2 |
| Uncharacterized protein YDL036C OS=Saccharomyces cerevisiae GN=YDL036C |
| Match: Q8DCG0 |
score: 85.1 |
e-value: 9e-16 |
Identity: 29.36% |
Span: 639bp (42.8%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Vibrio vulnificus GN=rluA |
| Match: Q8IZ73 |
score: 85.1 |
e-value: 9e-16 |
Identity: 30.69% |
Span: 603bp (40.4%) |
Frame: 2 |
| RNA pseudouridylate synthase domain-containing protein 2 OS=Homo sapiens GN=RPUSD2 PE=1 SV=2 |
| Match: Q87LD3 |
score: 84.3 |
e-value: 2e-15 |
Identity: 27.27% |
Span: 810bp (54.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Vibrio parahaemolyticus GN=rluA |
| Match: Q149F1 |
score: 83.6 |
e-value: 3e-15 |
Identity: 30.2% |
Span: 603bp (40.4%) |
Frame: 2 |
| RNA pseudouridylate synthase domain-containing protein 2 OS=Mus musculus GN=Rpusd2 PE=2 SV=2 |
| Match: Q8XA10 |
score: 83.2 |
e-value: 4e-15 |
Identity: 27.31% |
Span: 804bp (53.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Escherichia coli O157:H7 GN=rluA |
| Match: Q12362 |
score: 82.8 |
e-value: 5e-15 |
Identity: 27.92% |
Span: 711bp (47.6%) |
Frame: 2 |
| Bifunctional protein RIB2 OS=Saccharomyces cerevisiae GN=RIB2 PE=1 SV=1 |
| Match: Q87N15 |
score: 82.4 |
e-value: 6e-15 |
Identity: 27.52% |
Span: 879bp (58.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Vibrio parahaemolyticus GN=rluC |
| Match: Q87AR7 |
score: 82.4 |
e-value: 6e-15 |
Identity: 27.2% |
Span: 783bp (52.4%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rluD PE=3 ... |
| Match: P47451 |
score: 82 |
e-value: 8e-15 |
Identity: 28.36% |
Span: 801bp (53.7%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase MG209 OS=Mycoplasma genitalium GN=MG209 |
| Match: Q8ZIK1 |
score: 81.6 |
e-value: 1e-14 |
Identity: 31.43% |
Span: 627bp (42.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Yersinia pestis GN=rluA |
| Match: Q8D8G1 |
score: 81.6 |
e-value: 1e-14 |
Identity: 29.23% |
Span: 774bp (51.8%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Vibrio vulnificus GN=rluC |
| Match: Q8Z9J5 |
score: 81.3 |
e-value: 1e-14 |
Identity: 29.58% |
Span: 630bp (42.2%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Salmonella typhi GN=rluA |
| Match: Q8ZRV9 |
score: 80.9 |
e-value: 2e-14 |
Identity: 29.58% |
Span: 630bp (42.2%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Salmonella typhimurium GN=rluA |
| Match: Q9KP71 |
score: 80.9 |
e-value: 2e-14 |
Identity: 29.81% |
Span: 624bp (41.8%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Vibrio cholerae GN=rluA |
| Match: P44782 |
score: 80.9 |
e-value: 2e-14 |
Identity: 27.57% |
Span: 807bp (54.1%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase A OS=Haemophilus influenzae GN=rluA |
| Match: Q9PET9 |
score: 80.9 |
e-value: 2e-14 |
Identity: 27.48% |
Span: 783bp (52.4%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Xylella fastidiosa GN=rluD PE=3 SV=1 |
| Match: P59835 |
score: 79.7 |
e-value: 4e-14 |
Identity: 31.44% |
Span: 792bp (53.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Haemophilus ducreyi GN=rluC |
| Match: Q09709 |
score: 79 |
e-value: 7e-14 |
Identity: 25.65% |
Span: 798bp (53.4%) |
Frame: 2 |
| Uncharacterized protein C18B11.02c OS=Schizosaccharomyces pombe GN=SPAC18B11.02c PE=2 SV=1 |
| Match: P0A5T2 |
score: 78.2 |
e-value: 1e-13 |
Identity: 26.86% |
Span: 819bp (54.9%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase Rv1540/MT1592 OS=Mycobacterium tuberculosis GN=Rv1540 |
| Match: P0A5T3 |
score: 78.2 |
e-value: 1e-13 |
Identity: 26.86% |
Span: 819bp (54.9%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase Mb1567 OS=Mycobacterium bovis GN=Mb1567 |
| Match: Q87MD4 |
score: 76.6 |
e-value: 3e-13 |
Identity: 25.74% |
Span: 792bp (53.0%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Vibrio parahaemolyticus GN=truC |
| Match: Q8FEF9 |
score: 74.7 |
e-value: 1e-12 |
Identity: 28.15% |
Span: 783bp (52.4%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Escherichia coli O6 GN=truC |
| Match: Q8X6T6 |
score: 73.9 |
e-value: 2e-12 |
Identity: 28.15% |
Span: 783bp (52.4%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Escherichia coli O157:H7 GN=truC |
| Match: P0AA41 |
score: 73.9 |
e-value: 2e-12 |
Identity: 28.15% |
Span: 783bp (52.4%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Escherichia coli (strain K12) GN=truC |
| Match: Q8DBG5 |
score: 73.9 |
e-value: 2e-12 |
Identity: 25.09% |
Span: 813bp (54.5%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Vibrio vulnificus GN=truC |
| Match: P0AA42 |
score: 73.9 |
e-value: 2e-12 |
Identity: 28.15% |
Span: 783bp (52.4%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Shigella flexneri GN=truC |
| Match: Q8ZQ16 |
score: 73.2 |
e-value: 4e-12 |
Identity: 27.94% |
Span: 978bp (65.5%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Salmonella typhimurium GN=rluC |
| Match: Q9HZM9 |
score: 72.8 |
e-value: 5e-12 |
Identity: 29.43% |
Span: 810bp (54.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Pseudomonas aeruginosa GN=rluC |
| Match: Q9ZMA1 |
score: 72.4 |
e-value: 6e-12 |
Identity: 25.82% |
Span: 816bp (54.7%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase jhp_0321 OS=Helicobacter pylori J99 GN=jhp_0321 |
| Match: P53294 |
score: 72 |
e-value: 8e-12 |
Identity: 26.98% |
Span: 597bp (40.0%) |
Frame: 2 |
| Pseudouridylate synthase 6 OS=Saccharomyces cerevisiae GN=PUS6 PE=1 SV=1 |
| Match: Q8ZFU1 |
score: 71.6 |
e-value: 1e-11 |
Identity: 29.28% |
Span: 774bp (51.8%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Yersinia pestis GN=rluC |
| Match: O66114 |
score: 71.6 |
e-value: 1e-11 |
Identity: 29.7% |
Span: 597bp (40.0%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase ZMO0505 OS=Zymomonas mobilis GN=ZMO0505 |
| Match: P57430 |
score: 70.9 |
e-value: 2e-11 |
Identity: 27.2% |
Span: 783bp (52.4%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase C OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rluC |
| Match: Q9KTL4 |
score: 69.3 |
e-value: 5e-11 |
Identity: 24.36% |
Span: 798bp (53.4%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Vibrio cholerae GN=truC |
| Match: Q47417 |
score: 68.6 |
e-value: 9e-11 |
Identity: 26.39% |
Span: 777bp (52.0%) |
Frame: 2 |
| tRNA pseudouridine synthase C OS=Pectobacterium carotovorum subsp. carotovorum GN=truC |
|