| genbank/nr [blastx] | Showing best 27 hits recorded |
| Match: gi|25406684|pir||B96839 |
score: 51.22 |
e-value: 5.9e-06 |
Identity: 67.65% |
Span: 102bp (67.1%) |
Frame: 1 |
| gi|25406684|pir||B96839 hypothetical protein F23A5.3 [imported] - Arabidopsis thaliana gi|1297187|gb|AAA98914.1| simi... |
| Match: gi|30699531|ref|NP_178183.2| |
score: 51.22 |
e-value: 5.9e-06 |
Identity: 67.65% |
Span: 102bp (67.1%) |
Frame: 1 |
| SAR3 (SUPPRESSOR OF AUXIN RESISTANCE 3); porin [Arabidopsis thaliana] >gi22652299|gb|AAN03676.1|AF411839_1 putative n... |
| Match: gi|22652297|gb|AAN03675.1| |
score: 51.22 |
e-value: 5.9e-06 |
Identity: 67.65% |
Span: 102bp (67.1%) |
Frame: 1 |
| gi|22652297|gb|AAN03675.1| putative nucleoporin PRECOZ [Arabidopsis thaliana] |
| Match: gi|22329468|ref|NP_172510.2| |
score: 48.52 |
e-value: 3.8e-05 |
Identity: 74.19% |
Span: 93bp (61.2%) |
Frame: 1 |
| nucleoporin family protein [Arabidopsis thaliana] >gi79317517|ref|NP_001031018.1| nucleoporin family protein [Arabido... |
| Match: gi|25402598|pir||H86237 |
score: 48.52 |
e-value: 3.8e-05 |
Identity: 74.19% |
Span: 93bp (61.2%) |
Frame: 1 |
| gi|25402598|pir||H86237 protein F14N23.29 [imported] - Arabidopsis thaliana gi|4914343|gb|AAD32891.1| F14N23.29 [Arab... |
| Match: gi|15218866|ref|NP_176175.1| |
score: 46.21 |
e-value: 0.00019 |
Identity: 70.97% |
Span: 93bp (61.2%) |
Frame: 1 |
| nucleoporin family protein [Arabidopsis thaliana] |
| Match: gi|25404873|pir||C96620 |
score: 46.21 |
e-value: 0.00019 |
Identity: 70.97% |
Span: 93bp (61.2%) |
Frame: 1 |
| gi|25404873|pir||C96620 protein T30E16.23 [imported] - Arabidopsis thaliana gi|8778749|gb|AAF79757.1| T30E16.23 [Arab... |
| Match: gi|34784276|gb|AAH57608.1| |
score: 45.44 |
e-value: 0.00032 |
Identity: 75% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|34784276|gb|AAH57608.1| Nup98 protein [Mus musculus] |
| Match: gi|1709401|sp|P49793|NU98_RAT |
score: 45.44 |
e-value: 0.00032 |
Identity: 75% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|1709401|sp|P49793|NU98_RAT Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin) >gi|1363308... |
| Match: gi|34914964|ref|NP_918829.1| |
score: 45.05 |
e-value: 0.00042 |
Identity: 64.52% |
Span: 93bp (61.2%) |
Frame: 1 |
| gi|34914964|ref|NP_918829.1| similar to Arabidopsis thaliana chromosome 1, F14N23.29 [Oryza sativa (japonica cultivar... |
| Match: gi|23200267|pdb|1KO6|A |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|23200267|pdb|1KO6|A Chain A, Crystal Structure Of C-Terminal Autoproteolytic Domain Of Nucleoporin Nup98 gi|232002... |
| Match: gi|11414896|dbj|BAB18537.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|11414896|dbj|BAB18537.1| nucleoporin [Homo sapiens] |
| Match: gi|21264367|ref|NP_005378.3| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|21264367|ref|NP_005378.3| nucleoporin 98kD isoform 3; Nup98-Nup96 precursor; GLFG-repeat containing nucleoporin [H... |
| Match: gi|4545099|gb|AAD22395.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|4545099|gb|AAD22395.1| Nup98-Nup96 precursor [Homo sapiens] |
| Match: gi|21264371|ref|NP_624358.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|21264371|ref|NP_624358.1| nucleoporin 98kD isoform 4; Nup98-Nup96 precursor; GLFG-repeat containing nucleoporin [H... |
| Match: gi|4545101|gb|AAD22396.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|4545101|gb|AAD22396.1| Nup98-Nup96 precursor splice variant 1 [Homo sapiens] |
| Match: gi|18032249|gb|AAL56659.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|18032249|gb|AAL56659.1| NUP196 nucleoporin [Homo sapiens] |
| Match: gi|21264365|ref|NP_057404.2| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| nuclear pore complex protein Nup98-Nup96 isoform 1 [Homo sapiens] |
| Match: gi|33860189|sp|P52948|NU98_HUMAN |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|33860189|sp|P52948|NU98_HUMAN Nuclear pore complex protein Nup98-Nup96 precursor [Contains: Nuclear pore complex p... |
| Match: gi|21264369|ref|NP_624357.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|21264369|ref|NP_624357.1| nucleoporin 98kD isoform 2; Nup98-Nup96 precursor; GLFG-repeat containing nucleoporin [H... |
| Match: gi|26996545|gb|AAH41136.1| |
score: 44.67 |
e-value: 0.00055 |
Identity: 71.43% |
Span: 84bp (55.3%) |
Frame: 1 |
| gi|26996545|gb|AAH41136.1| Nucleoporin 98kD, isoform 2 [Homo sapiens] |
| Match: gi|30059994|gb|AAP13294.1| |
score: 44.28 |
e-value: 0.00072 |
Identity: 40.38% |
Span: 150bp (98.7%) |
Frame: 1 |
| gi|30059994|gb|AAP13294.1| nucleoporin 98-96 [Drosophila simulans] |
| Match: gi|40215470|gb|AAR82742.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 38.46% |
Span: 150bp (98.7%) |
Frame: 1 |
| gi|40215470|gb|AAR82742.1| SD08263p [Drosophila melanogaster] |
| Match: gi|24649423|ref|NP_651187.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 38.46% |
Span: 150bp (98.7%) |
Frame: 1 |
| gi|24649423|ref|NP_651187.1| CG10198-PA [Drosophila melanogaster] gi|23172084|gb|AAF56190.2| CG10198-PA [Drosophila m... |
| Match: gi|47221444|emb|CAF97362.1| |
score: 43.13 |
e-value: 0.002 |
Identity: 66.67% |
Span: 90bp (59.2%) |
Frame: 1 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|31207285|ref|XP_312609.1| |
score: 41.97 |
e-value: 0.004 |
Identity: 56.67% |
Span: 90bp (59.2%) |
Frame: 1 |
| gi|31207285|ref|XP_312609.1| ENSANGP00000001289 [Anopheles gambiae] gi|21296082|gb|EAA08227.1| ENSANGP00000001289 [An... |
| Match: gi|48097356|ref|XP_391886.1| |
score: 40.82 |
e-value: 0.008 |
Identity: 56.67% |
Span: 90bp (59.2%) |
Frame: 1 |
| gi|48097356|ref|XP_391886.1| similar to hypothetical protein [Apis mellifera] |
|
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At1g80680.1 |
score: 51.22 |
e-value: 1.2e-07 |
Identity: 67.65% |
Span: 102bp (67.1%) |
Frame: 1 |
| At1g80680.1 68408.m08665 nucleoporin PRECOZ (PRE) annotation temporarily based on supporting cDNA gi|22652298|gb|AF41... |
| Match: At1g10390.1 |
score: 48.52 |
e-value: 7.5e-07 |
Identity: 74.19% |
Span: 93bp (61.2%) |
Frame: 1 |
| At1g10390.1 68408.m01057 expressed protein similar to T cell receptor beta chain CDR3 (gi|3064031); similar to nucleo... |
| Match: At1g59660.1 |
score: 46.21 |
e-value: 3.7e-06 |
Identity: 70.97% |
Span: 93bp (61.2%) |
Frame: 1 |
| At1g59660.1 68408.m06151 nucleoporin 98-related protein similar to nucleoporin 98 GB:AAC50366 GI:1184173 from [Homo s... |
|
