| arabidopsis/peptide [blastx] | Showing best 39 hits recorded |
| Match: At5G52040.2 |
score: 214 |
e-value: 8e-56 |
Identity: 49.63% |
Span: 765bp (50.3%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At4G25500.2 |
score: 211 |
e-value: 1e-54 |
Identity: 46.88% |
Span: 765bp (50.3%) |
Frame: 1 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At4G25500.1 |
score: 211 |
e-value: 1e-54 |
Identity: 46.88% |
Span: 765bp (50.3%) |
Frame: 1 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At5G52040.1 |
score: 210 |
e-value: 2e-54 |
Identity: 49.63% |
Span: 765bp (50.3%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At3G61860.1 |
score: 166 |
e-value: 3e-41 |
Identity: 51.67% |
Span: 540bp (35.5%) |
Frame: 1 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.2 |
score: 154 |
e-value: 1e-37 |
Identity: 51.22% |
Span: 474bp (31.2%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At2G46610.1 |
score: 154 |
e-value: 1e-37 |
Identity: 51.22% |
Span: 474bp (31.2%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At5G52040.2 |
score: 77 |
e-value: 3e-14 |
Identity: 30.5% |
Span: 774bp (50.9%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.1 |
score: 77 |
e-value: 3e-14 |
Identity: 30.5% |
Span: 774bp (50.9%) |
Frame: 1 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At3G61860.1 |
score: 72.8 |
e-value: 5e-13 |
Identity: 26.39% |
Span: 573bp (37.7%) |
Frame: 1 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At1G07350.1 |
score: 72.8 |
e-value: 5e-13 |
Identity: 34.3% |
Span: 483bp (31.8%) |
Frame: 1 |
| transformer serine/arginine-rich ribonucleoprotein, putative | chr1:2257730-2260099 REVERSE |
| Match: At4G25500.1 |
score: 68.9 |
e-value: 7e-12 |
Identity: 29.06% |
Span: 753bp (49.5%) |
Frame: 1 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At2G46610.1 |
score: 65.1 |
e-value: 1e-10 |
Identity: 24.9% |
Span: 516bp (33.9%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At1G23860.1 |
score: 63.2 |
e-value: 4e-10 |
Identity: 33.86% |
Span: 462bp (30.4%) |
Frame: 1 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At1G23860.2 |
score: 63.2 |
e-value: 4e-10 |
Identity: 33.86% |
Span: 462bp (30.4%) |
Frame: 1 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At2G29210.1 |
score: 58.9 |
e-value: 8e-09 |
Identity: 33.16% |
Span: 552bp (36.3%) |
Frame: 1 |
| splicing factor PWI domain-containing protein | chr2:12565233-12569245 FORWARD |
| Match: At3G13570.1 |
score: 55.1 |
e-value: 1e-07 |
Identity: 22.92% |
Span: 735bp (48.3%) |
Frame: 1 |
| Symbols: SCL30a | SCL30a (SC35-like splicing factor 30a); RNA binding | chr3:4429571-4431609 REVERSE |
| Match: At2G29210.1 |
score: 55.1 |
e-value: 1e-07 |
Identity: 33.17% |
Span: 543bp (35.7%) |
Frame: 1 |
| splicing factor PWI domain-containing protein | chr2:12565233-12569245 FORWARD |
| Match: At3G26420.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 24.27% |
Span: 570bp (37.5%) |
Frame: 1 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At5G64200.1 |
score: 52.8 |
e-value: 6e-07 |
Identity: 25.94% |
Span: 606bp (39.8%) |
Frame: 1 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At5G64200.2 |
score: 52.8 |
e-value: 6e-07 |
Identity: 25.94% |
Span: 606bp (39.8%) |
Frame: 1 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At3G53500.2 |
score: 52.8 |
e-value: 6e-07 |
Identity: 25.47% |
Span: 567bp (37.3%) |
Frame: 1 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At2G37340.1 |
score: 51.2 |
e-value: 2e-06 |
Identity: 27.42% |
Span: 495bp (32.5%) |
Frame: 1 |
| Symbols: ATRSZ33, RSZ33 | RSZ33 (Arginine/serine-rich Zinc knuckle-containing protein 33); nucleic acid binding / nu... |
| Match: At2G24590.1 |
score: 50.8 |
e-value: 2e-06 |
Identity: 26.92% |
Span: 540bp (35.5%) |
Frame: 1 |
| splicing factor, putative | chr2:10456916-10457939 FORWARD |
| Match: At1G02840.3 |
score: 49.7 |
e-value: 5e-06 |
Identity: 26.53% |
Span: 573bp (37.7%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.1 |
score: 49.7 |
e-value: 5e-06 |
Identity: 26.53% |
Span: 573bp (37.7%) |
Frame: 1 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At4G31580.1 |
score: 48.9 |
e-value: 8e-06 |
Identity: 25.12% |
Span: 522bp (34.3%) |
Frame: 1 |
| Symbols: RSZP22, SRZ-22 | SRZ-22 (serine/arginine-rich 22) | chr4:15306989-15308070 FORWARD |
| Match: At1G55310.2 |
score: 48.1 |
e-value: 1e-05 |
Identity: 25.65% |
Span: 537bp (35.3%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
| Match: At3G55460.1 |
score: 47.8 |
e-value: 2e-05 |
Identity: 26.86% |
Span: 471bp (31.0%) |
Frame: 1 |
| Symbols: SCL30 | SCL30 (SC35-like splicing factor 30); RNA binding | chr3:20572001-20574479 FORWARD |
| Match: At5G18810.1 |
score: 47 |
e-value: 3e-05 |
Identity: 26.7% |
Span: 504bp (33.1%) |
Frame: 1 |
| Symbols: SCL28 | SCL28 (SC35-like splicing factor 28); RNA binding | chr5:6268927-6271160 REVERSE |
| Match: At1G55310.1 |
score: 46.6 |
e-value: 4e-05 |
Identity: 27.12% |
Span: 492bp (32.3%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At2G29210.1 |
score: 46.6 |
e-value: 4e-05 |
Identity: 28.92% |
Span: 546bp (35.9%) |
Frame: 1 |
| splicing factor PWI domain-containing protein | chr2:12565233-12569245 FORWARD |
| Match: At3G63400.1 |
score: 46.2 |
e-value: 5e-05 |
Identity: 37.76% |
Span: 399bp (26.2%) |
Frame: 1 |
| peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr3:23423424-23426410 FORWARD |
| Match: At4G36690.3 |
score: 45.8 |
e-value: 7e-05 |
Identity: 28.67% |
Span: 411bp (27.0%) |
Frame: 1 |
| Symbols: ATU2AF65A | ATU2AF65A; RNA binding | chr4:17294426-17297613 REVERSE |
| Match: At4G36690.1 |
score: 45.8 |
e-value: 7e-05 |
Identity: 28.67% |
Span: 411bp (27.0%) |
Frame: 1 |
| Symbols: ATU2AF65A | ATU2AF65A; RNA binding | chr4:17294143-17297613 REVERSE |
| Match: At4G36690.2 |
score: 45.8 |
e-value: 7e-05 |
Identity: 28.67% |
Span: 411bp (27.0%) |
Frame: 1 |
| Symbols: ATU2AF65A | ATU2AF65A; RNA binding | chr4:17294595-17297613 REVERSE |
| Match: At3G27700.1 |
score: 45.4 |
e-value: 9e-05 |
Identity: 29.45% |
Span: 414bp (27.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:10258918-10262567 REVERSE |
| Match: At3G27700.2 |
score: 45.4 |
e-value: 9e-05 |
Identity: 29.45% |
Span: 414bp (27.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:10258918-10262567 REVERSE |
| Match: At3G53500.1 |
score: 45.4 |
e-value: 9e-05 |
Identity: 33.33% |
Span: 360bp (23.7%) |
Frame: 1 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19846874 REVERSE |
|
| 55 lower scoring hits censored -- only 39 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|41323931|gb|AAS00039.1| |
score: 247 |
e-value: 9e-64 |
Identity: 54.55% |
Span: 777bp (51.1%) |
Frame: 1 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|30696140|ref|NP_200017.2| |
score: 214 |
e-value: 7e-54 |
Identity: 49.63% |
Span: 765bp (50.3%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|42573039|ref|NP_974616.1| |
score: 211 |
e-value: 1e-52 |
Identity: 46.88% |
Span: 765bp (50.3%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 211 |
e-value: 7e-53 |
Identity: 46.88% |
Span: 765bp (50.3%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 211 |
e-value: 1e-52 |
Identity: 46.88% |
Span: 765bp (50.3%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|30696138|ref|NP_851174.1| |
score: 210 |
e-value: 1e-52 |
Identity: 49.63% |
Span: 765bp (50.3%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|1707370|emb|CAA67799.1| |
score: 209 |
e-value: 3e-52 |
Identity: 49.25% |
Span: 765bp (50.3%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|1667582|gb|AAB18813.1| |
score: 209 |
e-value: 2e-52 |
Identity: 46.53% |
Span: 765bp (50.3%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|50904881|ref|XP_463929.1| |
score: 192 |
e-value: 5e-47 |
Identity: 58.89% |
Span: 525bp (34.5%) |
Frame: 1 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|18412169|ref|NP_567120.1| |
score: 166 |
e-value: 3e-39 |
Identity: 51.67% |
Span: 540bp (35.5%) |
Frame: 1 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|1707366|emb|CAA67798.1| |
score: 166 |
e-value: 3e-39 |
Identity: 51.67% |
Span: 540bp (35.5%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|6899884|emb|CAB71893.1| |
score: 165 |
e-value: 5e-39 |
Identity: 51.69% |
Span: 534bp (35.1%) |
Frame: 1 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|15226019|ref|NP_182184.1| |
score: 154 |
e-value: 8e-36 |
Identity: 51.22% |
Span: 474bp (31.2%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|42571257|ref|NP_973702.1| |
score: 154 |
e-value: 8e-36 |
Identity: 51.22% |
Span: 474bp (31.2%) |
Frame: 1 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|50921405|ref|XP_471063.1| |
score: 141 |
e-value: 9e-32 |
Identity: 49.09% |
Span: 489bp (32.1%) |
Frame: 1 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|47680295|gb|AAT37131.1| |
score: 130 |
e-value: 2e-28 |
Identity: 52.26% |
Span: 438bp (28.8%) |
Frame: 1 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 123 |
e-value: 2e-26 |
Identity: 47.5% |
Span: 477bp (31.4%) |
Frame: 1 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|47680309|gb|AAT37138.1| |
score: 108 |
e-value: 5e-22 |
Identity: 53.27% |
Span: 321bp (21.1%) |
Frame: 1 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|6759507|emb|CAB69816.1| |
score: 92.8 |
e-value: 4e-17 |
Identity: 80.77% |
Span: 156bp (10.3%) |
Frame: 1 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 85.1 |
e-value: 8e-15 |
Identity: 34.03% |
Span: 555bp (36.5%) |
Frame: 1 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|30696140|ref|NP_200017.2| |
score: 77 |
e-value: 2e-12 |
Identity: 30.5% |
Span: 774bp (50.9%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|71996524|ref|NP_495307.3| |
score: 77 |
e-value: 2e-12 |
Identity: 32.06% |
Span: 576bp (37.9%) |
Frame: 1 |
| SR |
| Match: gi|1707370|emb|CAA67799.1| |
score: 77 |
e-value: 2e-12 |
Identity: 30.5% |
Span: 774bp (50.9%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 77 |
e-value: 2e-12 |
Identity: 30.5% |
Span: 774bp (50.9%) |
Frame: 1 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|7446338|pir||T16953 |
score: 74.7 |
e-value: 1e-11 |
Identity: 31.58% |
Span: 576bp (37.9%) |
Frame: 1 |
| gi|7446338|pir||T16953 hypothetical protein T28D9.2 - Caenorhabditis elegans |
| Match: gi|39597103|emb|CAE59330.1| |
score: 73.6 |
e-value: 2e-11 |
Identity: 34.39% |
Span: 516bp (33.9%) |
Frame: 1 |
| gi|39597103|emb|CAE59330.1| Hypothetical protein CBG02672 [Caenorhabditis briggsae] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 73.2 |
e-value: 3e-11 |
Identity: 26.39% |
Span: 573bp (37.7%) |
Frame: 1 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|15292733|gb|AAK92735.1| |
score: 72.8 |
e-value: 4e-11 |
Identity: 34.3% |
Span: 483bp (31.8%) |
Frame: 1 |
| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana] |
| Match: gi|18412169|ref|NP_567120.1| |
score: 72.8 |
e-value: 4e-11 |
Identity: 26.39% |
Span: 573bp (37.7%) |
Frame: 1 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|42561780|ref|NP_563787.2| |
score: 72.8 |
e-value: 4e-11 |
Identity: 34.3% |
Span: 483bp (31.8%) |
Frame: 1 |
| transformer serine/arginine-rich ribonucleoprotein, putative [Arabidopsis thaliana] >gi28973767|gb|AAO64199.1| putati... |
| Match: gi|8778550|gb|AAF79558.1| |
score: 72.4 |
e-value: 5e-11 |
Identity: 34.29% |
Span: 483bp (31.8%) |
Frame: 1 |
| gi|8778550|gb|AAF79558.1| F22G5.31 [Arabidopsis thaliana] |
| Match: gi|72012128|ref|XP_784623.1| |
score: 71.2 |
e-value: 1e-10 |
Identity: 29.77% |
Span: 579bp (38.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|6899884|emb|CAB71893.1| |
score: 70.1 |
e-value: 3e-10 |
Identity: 26.01% |
Span: 585bp (38.5%) |
Frame: 1 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|54038377|gb|AAH84231.1| |
score: 69.7 |
e-value: 3e-10 |
Identity: 29.52% |
Span: 564bp (37.1%) |
Frame: 1 |
| gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis] |
| Match: gi|67471778|ref|XP_651801.1| |
score: 69.7 |
e-value: 3e-10 |
Identity: 30.85% |
Span: 528bp (34.7%) |
Frame: 1 |
| splicing |
| Match: gi|50947043|ref|XP_483049.1| |
score: 69.3 |
e-value: 5e-10 |
Identity: 27.12% |
Span: 768bp (50.5%) |
Frame: 1 |
| gi|50947043|ref|XP_483049.1| putative splicing factor, arginine/serine-rich [Oryza sativa (japonica cultivar-group)] ... |
| Match: gi|71996546|ref|NP_495308.3| |
score: 68.9 |
e-value: 6e-10 |
Identity: 34.39% |
Span: 441bp (29.0%) |
Frame: 1 |
| SR |
| Match: gi|71996532|ref|NP_495309.3| |
score: 68.9 |
e-value: 6e-10 |
Identity: 34.21% |
Span: 423bp (27.8%) |
Frame: 1 |
| SR |
| Match: gi|15235112|ref|NP_194280.1| |
score: 68.9 |
e-value: 6e-10 |
Identity: 29.06% |
Span: 753bp (49.5%) |
Frame: 1 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|733604|gb|AAC46767.1| |
score: 68.6 |
e-value: 8e-10 |
Identity: 33.51% |
Span: 513bp (33.7%) |
Frame: 1 |
| gi|733604|gb|AAC46767.1| Sr protein (splicing factor) protein 4, isoform a [Caenorhabditis elegans] >gi|17532817|ref|... |
| Match: gi|42542503|gb|AAH66442.1| |
score: 68.6 |
e-value: 8e-10 |
Identity: 28.97% |
Span: 546bp (35.9%) |
Frame: 1 |
| Zgc:65772 |
| Match: gi|1667582|gb|AAB18813.1| |
score: 68.6 |
e-value: 8e-10 |
Identity: 28.75% |
Span: 753bp (49.5%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|108707341|gb|ABF95136.1| |
score: 68.2 |
e-value: 1e-09 |
Identity: 29.57% |
Span: 519bp (34.1%) |
Frame: 1 |
| RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108707340|gb|ABF95135.1| |
score: 68.2 |
e-value: 1e-09 |
Identity: 29.57% |
Span: 519bp (34.1%) |
Frame: 1 |
| RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 68.2 |
e-value: 1e-09 |
Identity: 29.06% |
Span: 753bp (49.5%) |
Frame: 1 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|72007565|ref|XP_785989.1| |
score: 68.2 |
e-value: 1e-09 |
Identity: 30.05% |
Span: 489bp (32.1%) |
Frame: 1 |
| gi|72007565|ref|XP_785989.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC... |
| Match: gi|34902002|ref|NP_912347.1| |
score: 68.2 |
e-value: 1e-09 |
Identity: 29.57% |
Span: 519bp (34.1%) |
Frame: 1 |
| gi|34902002|ref|NP_912347.1| putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa (japonica cult... |
| Match: gi|39596864|emb|CAE59091.1| |
score: 67.4 |
e-value: 2e-09 |
Identity: 34.66% |
Span: 483bp (31.8%) |
Frame: 1 |
| gi|39596864|emb|CAE59091.1| Hypothetical protein CBG02383 [Caenorhabditis briggsae] |
| Match: gi|1781299|emb|CAA70700.1| |
score: 67.4 |
e-value: 2e-09 |
Identity: 35.62% |
Span: 414bp (27.2%) |
Frame: 1 |
| transformer-SR ribonucleoprotein [Nicotiana tabacum] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 66.6 |
e-value: 3e-09 |
Identity: 37.96% |
Span: 402bp (26.4%) |
Frame: 1 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|78191396|gb|ABB29919.1| |
score: 65.9 |
e-value: 5e-09 |
Identity: 28.28% |
Span: 624bp (41.0%) |
Frame: 1 |
| unknown [Solanum tuberosum] |
| Match: gi|46136697|ref|XP_390040.1| |
score: 65.9 |
e-value: 5e-09 |
Identity: 31.09% |
Span: 549bp (36.1%) |
Frame: 1 |
| gi|46136697|ref|XP_390040.1| hypothetical protein FG09864.1 [Gibberella zeae PH-1] >gi|42544905|gb|EAA67748.1| hypoth... |
| Match: gi|92896886|gb|ABE93398.1| |
score: 65.5 |
e-value: 7e-09 |
Identity: 27.85% |
Span: 591bp (38.9%) |
Frame: 1 |
| RNA-binding |
| Match: gi|3560199|emb|CAA20690.1| |
score: 65.1 |
e-value: 9e-09 |
Identity: 31.95% |
Span: 606bp (39.8%) |
Frame: 1 |
| srp1 |
| Match: gi|15226019|ref|NP_182184.1| |
score: 65.1 |
e-value: 9e-09 |
Identity: 24.9% |
Span: 516bp (33.9%) |
Frame: 1 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|1086592|gb|AAA82270.1| |
score: 64.7 |
e-value: 1e-08 |
Identity: 33.89% |
Span: 516bp (33.9%) |
Frame: 1 |
| Sr |
| Match: gi|9369411|gb|AAF87159.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 34.41% |
Span: 462bp (30.4%) |
Frame: 1 |
| gi|9369411|gb|AAF87159.1| T23E23.2 [Arabidopsis thaliana] |
| Match: gi|28302303|gb|AAH46695.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 30.5% |
Span: 522bp (34.3%) |
Frame: 1 |
| gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis] |
| Match: gi|1519460|gb|AAC49909.1| |
score: 63.9 |
e-value: 2e-08 |
Identity: 32.58% |
Span: 576bp (37.9%) |
Frame: 1 |
| Srp1 |
| Match: gi|90303584|gb|EAS33215.1| |
score: 63.9 |
e-value: 2e-08 |
Identity: 30.77% |
Span: 528bp (34.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|42571621|ref|NP_973901.1| |
score: 63.2 |
e-value: 3e-08 |
Identity: 33.86% |
Span: 462bp (30.4%) |
Frame: 1 |
| gi|42571621|ref|NP_973901.1| splicing factor RSZp21 (RSZP21) / 9G8-like SR protein (SRZ21) [Arabidopsis thaliana] >gi... |
| Match: gi|111226239|ref|XP_001134500.1| |
score: 62.8 |
e-value: 4e-08 |
Identity: 31.94% |
Span: 513bp (33.7%) |
Frame: 1 |
| CCHC |
| Match: gi|66802272|ref|XP_629918.1| |
score: 62.8 |
e-value: 4e-08 |
Identity: 31.94% |
Span: 513bp (33.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|20975276|dbj|BAB92955.1| |
score: 62.8 |
e-value: 4e-08 |
Identity: 34.29% |
Span: 384bp (25.2%) |
Frame: 1 |
| gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica] |
| Match: gi|56118384|ref|NP_001007946.1| |
score: 62.8 |
e-value: 4e-08 |
Identity: 28.5% |
Span: 564bp (37.1%) |
Frame: 1 |
| MGC89658 |
| Match: gi|109118423|ref|XP_001106051.1| |
score: 62.4 |
e-value: 6e-08 |
Identity: 28.64% |
Span: 561bp (36.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|72086012|ref|XP_793342.1| |
score: 62 |
e-value: 7e-08 |
Identity: 30.56% |
Span: 537bp (35.3%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|88179027|gb|EAQ86495.1| |
score: 62 |
e-value: 7e-08 |
Identity: 29.17% |
Span: 765bp (50.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|46105414|ref|XP_380511.1| |
score: 62 |
e-value: 7e-08 |
Identity: 29.63% |
Span: 420bp (27.6%) |
Frame: 1 |
| gi|46105414|ref|XP_380511.1| hypothetical protein FG00335.1 [Gibberella zeae PH-1] >gi|42544523|gb|EAA67366.1| hypoth... |
| Match: gi|67539264|ref|XP_663406.1| |
score: 61.6 |
e-value: 9e-08 |
Identity: 28.29% |
Span: 528bp (34.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|28175397|gb|AAH45229.1| |
score: 61.2 |
e-value: 1e-07 |
Identity: 27.86% |
Span: 561bp (36.9%) |
Frame: 1 |
| gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis] |
| Match: gi|58331865|ref|NP_001011096.1| |
score: 60.8 |
e-value: 2e-07 |
Identity: 26.97% |
Span: 624bp (41.0%) |
Frame: 1 |
| FUS |
| Match: gi|3334756|emb|CAA76346.1| |
score: 60.8 |
e-value: 2e-07 |
Identity: 26.91% |
Span: 615bp (40.4%) |
Frame: 1 |
| putative arginine/serine-rich splicing factor [Medicago sativa subsp. x varia] |
| Match: gi|85094653|ref|XP_959930.1| |
score: 60.8 |
e-value: 2e-07 |
Identity: 28.24% |
Span: 486bp (32.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|2582643|emb|CAA05351.1| |
score: 60.8 |
e-value: 2e-07 |
Identity: 30.73% |
Span: 486bp (32.0%) |
Frame: 1 |
| RSZp21 protein [Arabidopsis thaliana] |
| Match: gi|71000792|ref|XP_755077.1| |
score: 60.5 |
e-value: 2e-07 |
Identity: 29.72% |
Span: 597bp (39.3%) |
Frame: 1 |
| pre-mRNA |
| Match: gi|1403024|emb|CAA90876.1| |
score: 60.1 |
e-value: 3e-07 |
Identity: 38.61% |
Span: 288bp (18.9%) |
Frame: 1 |
| gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans] |
| Match: gi|39969139|ref|XP_365960.1| |
score: 59.7 |
e-value: 4e-07 |
Identity: 32.49% |
Span: 561bp (36.9%) |
Frame: 1 |
| gi|39969139|ref|XP_365960.1| hypothetical protein MG10180.4 [Magnaporthe grisea 70-15] |
| Match: gi|39582979|emb|CAE73044.1| |
score: 59.3 |
e-value: 5e-07 |
Identity: 30.68% |
Span: 507bp (33.3%) |
Frame: 1 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|54291611|dbj|BAD62534.1| |
score: 59.3 |
e-value: 5e-07 |
Identity: 30.92% |
Span: 576bp (37.9%) |
Frame: 1 |
| gi|54291611|dbj|BAD62534.1| putative transformer-SR ribonucleoprotein [Oryza sativa (japonica cultivar-group)] >gi|54... |
| Match: gi|77553789|gb|ABA96585.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 35% |
Span: 414bp (27.2%) |
Frame: 1 |
| gi|77553789|gb|ABA96585.1| RSZp22 splicing factor, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|54640338|gb|EAL29321.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 30.23% |
Span: 504bp (33.1%) |
Frame: 1 |
| GA19037-PA |
| Match: gi|89272025|emb|CAJ83230.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 26.91% |
Span: 624bp (41.0%) |
Frame: 1 |
| FUS |
| Match: gi|62898065|dbj|BAD96972.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 28.64% |
Span: 561bp (36.9%) |
Frame: 1 |
| gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens] |
| Match: gi|9843651|emb|CAC03679.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 33.16% |
Span: 552bp (36.3%) |
Frame: 1 |
| SRM102 [Arabidopsis thaliana] |
| Match: gi|3980411|gb|AAC95214.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 33.16% |
Span: 552bp (36.3%) |
Frame: 1 |
| putative proline-rich protein [Arabidopsis thaliana] |
| Match: gi|110762781|ref|XP_393352.2| |
score: 58.9 |
e-value: 6e-07 |
Identity: 33.12% |
Span: 414bp (27.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|30684163|ref|NP_180484.2| |
score: 58.9 |
e-value: 6e-07 |
Identity: 33.16% |
Span: 552bp (36.3%) |
Frame: 1 |
| splicing factor PWI domain-containing protein [Arabidopsis thaliana] >gi21928131|gb|AAM78093.1| At2g29210/F16P2.41 [A... |
| Match: gi|63752|emb|CAA44306.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 27.45% |
Span: 561bp (36.9%) |
Frame: 1 |
| gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus] >gi|47604918|ref|NP_001001305.1| arginine/serine-rich2 splicing facto... |
| Match: gi|72086012|ref|XP_793342.1| |
score: 58.9 |
e-value: 6e-07 |
Identity: 37.86% |
Span: 411bp (27.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|28279759|gb|AAH46045.1| |
score: 58.5 |
e-value: 8e-07 |
Identity: 28.06% |
Span: 543bp (35.7%) |
Frame: 1 |
| gi|28279759|gb|AAH46045.1| Similar to splicing factor, arginine/serine-rich 2 (SC-35) [Danio rerio] |
| Match: gi|103056|pir||A37282 |
score: 58.5 |
e-value: 8e-07 |
Identity: 32.8% |
Span: 375bp (24.7%) |
Frame: 1 |
| gi|103056|pir||A37282 52K active chromatin boundary protein - fruit fly (Drosophila melanogaster) |
| Match: gi|50906727|ref|XP_464852.1| |
score: 58.5 |
e-value: 8e-07 |
Identity: 31.75% |
Span: 579bp (38.1%) |
Frame: 1 |
| gi|50906727|ref|XP_464852.1| putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] >gi|51963962|... |
| Match: gi|28422195|gb|AAH44265.1| |
score: 58.5 |
e-value: 8e-07 |
Identity: 25.68% |
Span: 750bp (49.3%) |
Frame: 1 |
| gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis] |
| Match: gi|28571691|ref|NP_788668.1| |
score: 58.5 |
e-value: 8e-07 |
Identity: 32.8% |
Span: 375bp (24.7%) |
Frame: 1 |
| gi|28571691|ref|NP_788668.1| CG10851-PB [Drosophila melanogaster] gi|7299789|gb|AAF54968.1| CG10851-PB [Drosophila me... |
| Match: gi|7637|emb|CAA44483.1| |
score: 58.5 |
e-value: 8e-07 |
Identity: 32.8% |
Span: 375bp (24.7%) |
Frame: 1 |
| gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster] |
| Match: gi|30684163|ref|NP_180484.2| |
score: 55.1 |
e-value: 9e-06 |
Identity: 33.17% |
Span: 543bp (35.7%) |
Frame: 1 |
| splicing factor PWI domain-containing protein [Arabidopsis thaliana] >gi21928131|gb|AAM78093.1| At2g29210/F16P2.41 [A... |
| Match: gi|9843651|emb|CAC03679.1| |
score: 55.1 |
e-value: 9e-06 |
Identity: 33.17% |
Span: 543bp (35.7%) |
Frame: 1 |
| SRM102 [Arabidopsis thaliana] |
| Match: gi|3980411|gb|AAC95214.1| |
score: 55.1 |
e-value: 9e-06 |
Identity: 33.17% |
Span: 543bp (35.7%) |
Frame: 1 |
| putative proline-rich protein [Arabidopsis thaliana] |
| Match: gi|50904881|ref|XP_463929.1| |
score: 53.1 |
e-value: 3e-05 |
Identity: 25.56% |
Span: 564bp (37.1%) |
Frame: 1 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
|
| 204 lower scoring hits censored -- only 100 best hits are stored. |
