| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225430017|ref|XP_002284157.1| |
score: 494 |
e-value: 9e-138 |
Identity: 61.28% |
Span: 1395bp (85.2%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147819226|emb|CAN66913.1| |
score: 491 |
e-value: 1e-136 |
Identity: 61.06% |
Span: 1395bp (85.2%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|255551040|ref|XP_002516568.1| |
score: 459 |
e-value: 4e-127 |
Identity: 55.28% |
Span: 1395bp (85.2%) |
Frame: 3 |
| lupus la ribonucleoprotein, putative [Ricinus communis] >gi223544388|gb|EEF45909.1| lupus la ribonucleoprotein, putat... |
| Match: gi|22530928|gb|AAM96968.1| |
score: 410 |
e-value: 2e-112 |
Identity: 53.36% |
Span: 1401bp (85.6%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] >gi23198376|gb|AAN15715.1| putative protein [Arabidopsis thaliana] |
| Match: gi|18418072|ref|NP_567904.1| |
score: 410 |
e-value: 3e-112 |
Identity: 53.36% |
Span: 1401bp (85.6%) |
Frame: 3 |
| AtLa1 (Arabidopsis thaliana La protein 1); RNA binding >gi15810397|gb|AAL07086.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|79326195|ref|NP_001031777.1| |
score: 407 |
e-value: 2e-111 |
Identity: 54.97% |
Span: 1275bp (77.9%) |
Frame: 3 |
| AtLa1 (Arabidopsis thaliana La protein 1); RNA binding |
| Match: gi|242076366|ref|XP_002448119.1| |
score: 392 |
e-value: 5e-107 |
Identity: 51.4% |
Span: 1287bp (78.6%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_06g021470 [Sorghum bicolor] >gi241939302|gb|EES12447.1| hypothetical protein SORBIDRA... |
| Match: gi|212721944|ref|NP_001132618.1| |
score: 391 |
e-value: 1e-106 |
Identity: 50.57% |
Span: 1302bp (79.5%) |
Frame: 3 |
| hypothetical protein LOC100194092 [Zea mays] >gi194694916|gb|ACF81542.1| unknown [Zea mays] |
| Match: gi|3063698|emb|CAA18589.1| |
score: 376 |
e-value: 5e-102 |
Identity: 53.36% |
Span: 1224bp (74.8%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] >gi7270219|emb|CAB79989.1| putative protein [Arabidopsis thaliana] |
| Match: gi|242065736|ref|XP_002454157.1| |
score: 374 |
e-value: 2e-101 |
Identity: 48.37% |
Span: 1281bp (78.3%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_04g025650 [Sorghum bicolor] >gi241933988|gb|EES07133.1| hypothetical protein SORBIDRA... |
| Match: gi|125540248|gb|EAY86643.1| |
score: 372 |
e-value: 5e-101 |
Identity: 48.43% |
Span: 1287bp (78.6%) |
Frame: 3 |
| hypothetical protein OsI_08024 [Oryza sativa Indica Group] |
| Match: gi|115447237|ref|NP_001047398.1| |
score: 371 |
e-value: 1e-100 |
Identity: 48.21% |
Span: 1287bp (78.6%) |
Frame: 3 |
| Os02g0610400 [Oryza sativa (japonica cultivar-group)] >gi47496847|dbj|BAD19607.1| putative RNA recognition motif (RRM... |
| Match: gi|116310718|emb|CAH67515.1| |
score: 367 |
e-value: 2e-99 |
Identity: 49.19% |
Span: 1287bp (78.6%) |
Frame: 3 |
| OSIGBa0092E01.10 [Oryza sativa (indica cultivar-group)] >gi125548889|gb|EAY94711.1| hypothetical protein OsI_16489 [O... |
| Match: gi|125572738|gb|EAZ14253.1| |
score: 365 |
e-value: 1e-98 |
Identity: 48.96% |
Span: 1287bp (78.6%) |
Frame: 3 |
| hypothetical protein OsJ_04179 [Oryza sativa Japonica Group] |
| Match: gi|115459214|ref|NP_001053207.1| |
score: 364 |
e-value: 1e-98 |
Identity: 48.96% |
Span: 1287bp (78.6%) |
Frame: 3 |
| Os04g0497600 [Oryza sativa (japonica cultivar-group)] >gi38345389|emb|CAE03115.2| OSJNBa0067K08.18 [Oryza sativa (jap... |
| Match: gi|270231564|emb|CBI20889.1| |
score: 353 |
e-value: 4e-95 |
Identity: 59.49% |
Span: 945bp (57.7%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255647422|gb|ACU24176.1| |
score: 337 |
e-value: 2e-90 |
Identity: 49.58% |
Span: 1041bp (63.6%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255549962|ref|XP_002516032.1| |
score: 300 |
e-value: 4e-79 |
Identity: 43.62% |
Span: 1257bp (76.8%) |
Frame: 3 |
| lupus la ribonucleoprotein, putative [Ricinus communis] >gi223544937|gb|EEF46452.1| lupus la ribonucleoprotein, putat... |
| Match: gi|12324595|gb|AAG52256.1|AC011717_24 |
score: 293 |
e-value: 4e-77 |
Identity: 40.93% |
Span: 1290bp (78.8%) |
Frame: 3 |
| putative RNA-binding protein; 55844-57764 [Arabidopsis thaliana] |
| Match: gi|30699461|ref|NP_178106.2| |
score: 293 |
e-value: 4e-77 |
Identity: 40.93% |
Span: 1290bp (78.8%) |
Frame: 3 |
| La domain-containing protein [Arabidopsis thaliana] >gi111074414|gb|ABH04580.1| At1g79880 [Arabidopsis thaliana] |
| Match: gi|110736337|dbj|BAF00138.1| |
score: 292 |
e-value: 9e-77 |
Identity: 40.7% |
Span: 1290bp (78.8%) |
Frame: 3 |
| RNA-binding protein like [Arabidopsis thaliana] |
| Match: gi|224143006|ref|XP_002324815.1| |
score: 267 |
e-value: 3e-69 |
Identity: 68.98% |
Span: 561bp (34.3%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222866249|gb|EEF03380.1| predicted protein [Populus trichocarpa] |
| Match: gi|224092324|ref|XP_002309558.1| |
score: 265 |
e-value: 1e-68 |
Identity: 68.45% |
Span: 561bp (34.3%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222855534|gb|EEE93081.1| predicted protein [Populus trichocarpa] |
| Match: gi|168042691|ref|XP_001773821.1| |
score: 246 |
e-value: 6e-63 |
Identity: 37.84% |
Span: 1164bp (71.1%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162674936|gb|EDQ61438.1| predicted protein [Physcomitrella... |
| Match: gi|270231564|emb|CBI20889.1| |
score: 126 |
e-value: 9e-27 |
Identity: 66.67% |
Span: 429bp (26.2%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
|
| 172 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At4G32720.1 |
score: 410 |
e-value: 2e-114 |
Identity: 53.36% |
Span: 1401bp (85.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr4:15787318-15789688 FORWARD |
| Match: At4G32720.2 |
score: 407 |
e-value: 1e-113 |
Identity: 54.97% |
Span: 1275bp (77.9%) |
Frame: 3 |
| RNA binding | chr4:15787318-15789503 FORWARD |
| Match: At1G79880.1 |
score: 293 |
e-value: 2e-79 |
Identity: 40.93% |
Span: 1290bp (78.8%) |
Frame: 3 |
| La domain-containing protein | chr1:30051115-30053229 REVERSE |
| Match: At1G79880.3 |
score: 216 |
e-value: 3e-56 |
Identity: 36.7% |
Span: 1128bp (68.9%) |
Frame: 3 |
| La domain-containing protein | chr1:30051115-30052907 REVERSE |
| Match: At1G79880.2 |
score: 216 |
e-value: 3e-56 |
Identity: 36.7% |
Span: 1128bp (68.9%) |
Frame: 3 |
| La domain-containing protein | chr1:30051115-30052907 REVERSE |
| Match: At5G46250.1 |
score: 77.8 |
e-value: 2e-14 |
Identity: 26.67% |
Span: 900bp (55.0%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:18772615-18775283 FORWARD |
| Match: At5G46250.3 |
score: 74.7 |
e-value: 2e-13 |
Identity: 35% |
Span: 420bp (25.7%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:18772615-18774950 FORWARD |
| Match: At5G46250.2 |
score: 74.7 |
e-value: 2e-13 |
Identity: 35% |
Span: 420bp (25.7%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:18772615-18774950 FORWARD |
| Match: At2G43970.2 |
score: 67 |
e-value: 3e-11 |
Identity: 29.08% |
Span: 423bp (25.8%) |
Frame: 3 |
| La domain-containing protein | chr2:18212611-18215107 REVERSE |
| Match: At2G43970.1 |
score: 67 |
e-value: 3e-11 |
Identity: 29.08% |
Span: 423bp (25.8%) |
Frame: 3 |
| La domain-containing protein | chr2:18212611-18215107 REVERSE |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: P33399 |
score: 93.6 |
e-value: 4e-18 |
Identity: 32.92% |
Span: 660bp (40.3%) |
Frame: 3 |
| La protein homolog OS=Saccharomyces cerevisiae GN=LAH1 PE=1 SV=2 |
| Match: Q5XI01 |
score: 86.7 |
e-value: 5e-16 |
Identity: 24.06% |
Span: 987bp (60.3%) |
Frame: 3 |
| La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2 |
| Match: Q28G87 |
score: 84 |
e-value: 3e-15 |
Identity: 23.78% |
Span: 1008bp (61.6%) |
Frame: 3 |
| La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1 |
| Match: P40796 |
score: 82 |
e-value: 1e-14 |
Identity: 27.78% |
Span: 819bp (50.0%) |
Frame: 3 |
| La protein homolog OS=Drosophila melanogaster GN=La PE=1 SV=2 |
| Match: Q4R627 |
score: 81.6 |
e-value: 1e-14 |
Identity: 25% |
Span: 1014bp (61.9%) |
Frame: 3 |
| La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1 |
| Match: Q05CL8 |
score: 81.3 |
e-value: 2e-14 |
Identity: 26.43% |
Span: 1017bp (62.1%) |
Frame: 3 |
| La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2 |
| Match: Q4G0J3 |
score: 81.3 |
e-value: 2e-14 |
Identity: 24.14% |
Span: 1014bp (61.9%) |
Frame: 3 |
| La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1 |
| Match: Q7ZWE3 |
score: 78.6 |
e-value: 1e-13 |
Identity: 30.18% |
Span: 507bp (31.0%) |
Frame: 3 |
| La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1 |
| Match: Q26457 |
score: 77 |
e-value: 4e-13 |
Identity: 24.7% |
Span: 948bp (57.9%) |
Frame: 3 |
| La protein homolog OS=Aedes albopictus PE=1 SV=1 |
| Match: P87058 |
score: 69.7 |
e-value: 6e-11 |
Identity: 31.4% |
Span: 594bp (36.3%) |
Frame: 3 |
| La protein homolog OS=Schizosaccharomyces pombe GN=sla1 PE=1 SV=1 |
|
