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All Stored BLAST annotations for SGN-U571984
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|82621124|gb|ABB86250.1| score: 476 e-value: 3e-132 Identity: 84.96% Span: 1341bp (75.5%) Frame: 3
RNA-binding protein AKIP1-like [Solanum tuberosum]
Match: gi|157343349|emb|CAO67400.1| score: 335 e-value: 1e-89 Identity: 76.15% Span: 654bp (36.8%) Frame: 3
unnamed
Match: gi|147853236|emb|CAN80681.1| score: 335 e-value: 1e-89 Identity: 76.15% Span: 654bp (36.8%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|147807511|emb|CAN72884.1| score: 313 e-value: 4e-83 Identity: 60.28% Span: 843bp (47.5%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|21666573|gb|AAM73765.1|AF403292_1 score: 296 e-value: 3e-78 Identity: 61.87% Span: 765bp (43.1%) Frame: 3
RNA-binding protein AKIP1 [Vicia faba]
Match: gi|18410591|ref|NP_567042.1| score: 295 e-value: 1e-77 Identity: 65.92% Span: 648bp (36.5%) Frame: 3
UBP1 interacting protein 2a (UBA2a) [Arabidopsis thaliana] >gi30694526|ref|NP_850710.1| UBP1 interacting protein 2a (...
Match: gi|14596195|gb|AAK68825.1| score: 295 e-value: 1e-77 Identity: 65.92% Span: 648bp (36.5%) Frame: 3
putative protein [Arabidopsis thaliana] >gi20148397|gb|AAM10089.1| putative protein [Arabidopsis thaliana]
Match: gi|87162862|gb|ABD28657.1| score: 294 e-value: 2e-77 Identity: 66.97% Span: 648bp (36.5%) Frame: 3
RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula]
Match: gi|84468368|dbj|BAE71267.1| score: 294 e-value: 2e-77 Identity: 54.32% Span: 957bp (53.9%) Frame: 3
hypothetical protein [Trifolium pratense]
Match: gi|84468340|dbj|BAE71253.1| score: 293 e-value: 3e-77 Identity: 57.34% Span: 843bp (47.5%) Frame: 3
hypothetical protein [Trifolium pratense]
Match: gi|15226817|ref|NP_181639.1| score: 286 e-value: 5e-75 Identity: 65.44% Span: 648bp (36.5%) Frame: 3
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi145331087|ref|NP_001078035.1| RNA recognitio...
Match: gi|195635617|gb|ACG37277.1| score: 284 e-value: 2e-74 Identity: 58.36% Span: 783bp (44.1%) Frame: 3
RNA
Match: gi|194700464|gb|ACF84316.1| score: 283 e-value: 3e-74 Identity: 64.29% Span: 648bp (36.5%) Frame: 3
unknown [Zea mays]
Match: gi|194698020|gb|ACF83094.1| score: 283 e-value: 3e-74 Identity: 64.29% Span: 648bp (36.5%) Frame: 3
unknown [Zea mays]
Match: gi|115435828|ref|NP_001042672.1| score: 271 e-value: 1e-70 Identity: 63.32% Span: 648bp (36.5%) Frame: 3
Os01g0265800 [Oryza sativa (japonica cultivar-group)] >gi6815067|dbj|BAA90354.1| putative UBP1 interacting protein 1a...
Match: gi|116787988|gb|ABK24718.1| score: 253 e-value: 4e-65 Identity: 58.41% Span: 642bp (36.2%) Frame: 3
unknown [Picea sitchensis] >gi148910800|gb|ABR18466.1| unknown [Picea sitchensis]
Match: gi|157345063|emb|CAO71791.1| score: 231 e-value: 1e-58 Identity: 54.03% Span: 633bp (35.7%) Frame: 3
unnamed
Match: gi|157343348|emb|CAO67399.1| score: 221 e-value: 1e-55 Identity: 52.63% Span: 627bp (35.3%) Frame: 3
unnamed
Match: gi|168024548|ref|XP_001764798.1| score: 214 e-value: 2e-53 Identity: 49.54% Span: 648bp (36.5%) Frame: 3
predicted protein [Physcomitrella patens subsp. patens] >gi162684092|gb|EDQ70497.1| predicted protein [Physcomitrella...
Match: gi|115460844|ref|NP_001054022.1| score: 208 e-value: 1e-51 Identity: 48.68% Span: 630bp (35.5%) Frame: 3
Os04g0636900
Match: gi|195615710|gb|ACG29685.1| score: 204 e-value: 2e-50 Identity: 45.69% Span: 630bp (35.5%) Frame: 3
RNA-binding
Match: gi|15232459|ref|NP_188119.1| score: 200 e-value: 4e-49 Identity: 47.69% Span: 648bp (36.5%) Frame: 3
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi42572443|ref|NP_974317.1| RNA recognition mo...
Match: gi|212275065|ref|NP_001130367.1| score: 199 e-value: 7e-49 Identity: 50.24% Span: 564bp (31.8%) Frame: 3
hypothetical
Match: gi|147789426|emb|CAN66609.1| score: 199 e-value: 9e-49 Identity: 47.42% Span: 639bp (36.0%) Frame: 3
hypothetical
Match: gi|116779627|gb|ABK21372.1| score: 195 e-value: 1e-47 Identity: 47.47% Span: 651bp (36.7%) Frame: 3
unknown [Picea sitchensis]
Match: gi|148910248|gb|ABR18205.1| score: 195 e-value: 1e-47 Identity: 47.47% Span: 651bp (36.7%) Frame: 3
unknown [Picea sitchensis]
Match: gi|147845244|emb|CAN83373.1| score: 191 e-value: 2e-46 Identity: 49.76% Span: 633bp (35.7%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|195643046|gb|ACG40991.1| score: 189 e-value: 7e-46 Identity: 47.25% Span: 645bp (36.3%) Frame: 3
heterogeneous
Match: gi|116787064|gb|ABK24360.1| score: 186 e-value: 5e-45 Identity: 44.34% Span: 636bp (35.8%) Frame: 3
unknown [Picea sitchensis]
Match: gi|115438550|ref|NP_001043567.1| score: 183 e-value: 5e-44 Identity: 45.12% Span: 636bp (35.8%) Frame: 3
Os01g0614500 [Oryza sativa (japonica cultivar-group)] >gi54290288|dbj|BAD61233.1| heterogeneous nuclear ribonucleopro...
Match: gi|125591780|gb|EAZ32130.1| score: 181 e-value: 1e-43 Identity: 46.38% Span: 567bp (31.9%) Frame: 3
hypothetical
Match: gi|168045478|ref|XP_001775204.1| score: 172 e-value: 1e-40 Identity: 48.85% Span: 522bp (29.4%) Frame: 3
predicted protein [Physcomitrella patens subsp. patens] >gi162673417|gb|EDQ59940.1| predicted protein [Physcomitrella...
Match: gi|157353453|emb|CAO45392.1| score: 170 e-value: 2e-46 Identity: 73.39% Span: 327bp (18.4%) Frame: 3
unnamed
Match: gi|168021263|ref|XP_001763161.1| score: 165 e-value: 1e-38 Identity: 41.62% Span: 591bp (33.3%) Frame: 3
predicted protein [Physcomitrella patens subsp. patens] >gi162685644|gb|EDQ72038.1| predicted protein [Physcomitrella...
Match: gi|157348485|emb|CAO23377.1| score: 162 e-value: 9e-38 Identity: 39.6% Span: 606bp (34.1%) Frame: 3
unnamed
Match: gi|115447159|ref|NP_001047359.1| score: 154 e-value: 2e-35 Identity: 39.27% Span: 642bp (36.2%) Frame: 3
Os02g0602600
Match: gi|125534915|gb|EAY81463.1| score: 148 e-value: 2e-33 Identity: 37.44% Span: 651bp (36.7%) Frame: 3
hypothetical
Match: gi|77551814|gb|ABA94611.1| score: 147 e-value: 4e-33 Identity: 37.61% Span: 648bp (36.5%) Frame: 3
gi|77551814|gb|ABA94611.1| hypothetical protein LOC_Os11g39030 [Oryza sativa (japonica cultivar-group)]
Match: gi|18399877|ref|NP_565525.1| score: 119 e-value: 1e-24 Identity: 51.38% Span: 327bp (18.4%) Frame: 3
UBP1 interacting protein 1a (UBA1a) [Arabidopsis thaliana] >gi17380804|gb|AAL36089.1| putative RNA-binding protein [A...
Match: gi|21595502|gb|AAM66107.1| score: 119 e-value: 1e-24 Identity: 51.38% Span: 327bp (18.4%) Frame: 3
putative RNA-binding protein [Arabidopsis thaliana]
Match: gi|30681615|ref|NP_850021.1| score: 119 e-value: 1e-24 Identity: 51.38% Span: 327bp (18.4%) Frame: 3
UBP1 interacting protein 1a (UBA1a) [Arabidopsis thaliana]
Match: gi|19574236|emb|CAD28134.1| score: 117 e-value: 3e-24 Identity: 50.46% Span: 327bp (18.4%) Frame: 3
UBP1 interacting protein 1a [Arabidopsis thaliana]
Match: gi|18399023|ref|NP_565450.1| score: 110 e-value: 4e-22 Identity: 48.62% Span: 327bp (18.4%) Frame: 3
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20197017|gb|AAC16468.2| putative RNA-binding...
Match: gi|51969640|dbj|BAD43512.1| score: 106 e-value: 8e-21 Identity: 61.84% Span: 228bp (12.8%) Frame: 3
putative
Match: gi|21593807|gb|AAM65774.1| score: 104 e-value: 2e-20 Identity: 46.73% Span: 321bp (18.1%) Frame: 3
gi|21593807|gb|AAM65774.1| putative RNA-binding protein [Arabidopsis thaliana]
Match: gi|18399879|ref|NP_565526.1| score: 104 e-value: 2e-20 Identity: 46.73% Span: 321bp (18.1%) Frame: 3
gi|18399879|ref|NP_565526.1| RRM-containing RNA-binding protein [Arabidopsis thaliana] gi|20198217|gb|AAD25814.2| put...
Match: gi|71896513|ref|NP_001025523.1| score: 102 e-value: 1e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
gi|71896513|ref|NP_001025523.1| AUF1 [Xenopus tropicalis] >gi|52355236|gb|AAU44811.1| AUF1 [Xenopus tropicalis]
Match: gi|508270|gb|AAA64654.1| score: 102 e-value: 1e-19 Identity: 33.12% Span: 480bp (27.0%) Frame: 3
A+U-rich
Match: gi|109074343|ref|XP_001088727.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|116256516|ref|NP_001070735.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|51477708|ref|NP_001003810.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|3747052|gb|AAC77437.1| score: 100 e-value: 6e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Match: gi|114594007|ref|XP_517193.2| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|114594011|ref|XP_001143360.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|149639446|ref|XP_001505245.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|74001711|ref|XP_857875.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|194390332|dbj|BAG61935.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
unnamed
Match: gi|47221330|emb|CAF97248.1| score: 100 e-value: 4e-19 Identity: 32.58% Span: 534bp (30.1%) Frame: 3
gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|2773158|gb|AAB96683.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Match: gi|116256512|ref|NP_001070733.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|148878011|gb|AAI46039.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
HNRNPD
Match: gi|74001707|ref|XP_535627.2| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|119626284|gb|EAX05879.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|126330949|ref|XP_001364005.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|433344|gb|AAC50056.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|433344|gb|AAC50056.1| p37 AUF1
Match: gi|14110414|ref|NP_002129.2| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D isoform c; AU-rich element RNA-binding protein...
Match: gi|870747|dbj|BAA09524.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Match: gi|211826253|gb|AAH11172.2| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
Hnrnpd
Match: gi|870743|dbj|BAA09522.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Match: gi|116256514|ref|NP_031542.2| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|119626277|gb|EAX05872.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|14110420|ref|NP_112738.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D isoform a; AU-rich element RNA-binding protein...
Match: gi|148230364|ref|NP_001091533.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|14110417|ref|NP_112737.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D isoform b; AU-rich element RNA-binding protein...
Match: gi|116256518|ref|NP_001070734.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|194209024|ref|XP_001916309.1| score: 100 e-value: 3e-19 Identity: 30.37% Span: 543bp (30.6%) Frame: 3
PREDICTED:
Match: gi|74001695|ref|XP_848950.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|74001699|ref|XP_857639.1| score: 100 e-value: 4e-19 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
PREDICTED:
Match: gi|66911597|gb|AAH97855.1| score: 99.8 e-value: 7e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
Unknown
Match: gi|148227150|ref|NP_001088992.1| score: 99.8 e-value: 7e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
p37
Match: gi|9588098|dbj|BAB03466.1| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus]
Match: gi|194209022|ref|XP_001493010.2| score: 99.4 e-value: 9e-19 Identity: 31.43% Span: 525bp (29.6%) Frame: 3
PREDICTED:
Match: gi|127139089|ref|NP_001076008.1| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|127139464|ref|NP_001076009.1| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|13124487|sp|Q9JJ54|HNRPD_RAT score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
Heterogeneous
Match: gi|127138754|ref|NP_001076010.1| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|127138710|ref|NP_077380.2| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
heterogeneous
Match: gi|9588100|dbj|BAB03467.1| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Match: gi|9588102|dbj|BAB03468.1| score: 99.4 e-value: 9e-19 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Match: gi|71896731|ref|NP_001026314.1| score: 99 e-value: 1e-18 Identity: 32.08% Span: 477bp (26.9%) Frame: 3
heterogeneous
Match: gi|50059467|gb|AAT02209.2| score: 98.6 e-value: 2e-18 Identity: 31.43% Span: 525bp (29.6%) Frame: 3
AUF1
Match: gi|181914|gb|AAA35781.1| score: 98.2 e-value: 2e-18 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
gi|181914|gb|AAA35781.1| DNA-binding protein
Match: gi|73970515|ref|XP_849410.1| score: 97.8 e-value: 3e-18 Identity: 32.53% Span: 498bp (28.1%) Frame: 3
PREDICTED:
Match: gi|160333913|ref|NP_001103930.1| score: 97.4 e-value: 4e-18 Identity: 32.28% Span: 474bp (26.7%) Frame: 3
hypothetical
Match: gi|149046824|gb|EDL99598.1| score: 97.4 e-value: 4e-18 Identity: 31.45% Span: 477bp (26.9%) Frame: 3
heterogeneous
Match: gi|149046822|gb|EDL99596.1| score: 97.4 e-value: 4e-18 Identity: 31.45% Span: 477bp (26.9%) Frame: 3
heterogeneous
Match: gi|162951821|ref|NP_001106165.1| score: 97.1 e-value: 5e-18 Identity: 31.46% Span: 534bp (30.1%) Frame: 3
heterogeneous
Match: gi|94966849|ref|NP_001035612.1| score: 97.1 e-value: 5e-18 Identity: 31.46% Span: 534bp (30.1%) Frame: 3
hypothetical
Match: gi|82621124|gb|ABB86250.1| score: 76.6 e-value: 7e-12 Identity: 38.53% Span: 306bp (17.2%) Frame: 2
RNA-binding protein AKIP1-like [Solanum tuberosum]
Match: gi|157353453|emb|CAO45392.1| score: 42.4 e-value: 2e-46 Identity: 61.29% Span: 93bp (5.2%) Frame: 2
unnamed

152 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 27 hits recorded
Match: At3G56860.1 score: 295 e-value: 8e-80 Identity: 65.92% Span: 648bp (36.5%) Frame: 3
Symbols: UBA2A | UBA2A; RNA binding | chr3:21061687-21063123 REVERSE
Match: At3G56860.2 score: 295 e-value: 8e-80 Identity: 65.92% Span: 648bp (36.5%) Frame: 3
Symbols: UBA2A | UBA2A; AU-specific RNA binding / RNA binding | chr3:21061687-21063123 REVERSE
Match: At3G56860.3 score: 295 e-value: 8e-80 Identity: 65.92% Span: 648bp (36.5%) Frame: 3
Symbols: UBA2A | UBA2A; RNA binding | chr3:21061687-21063123 REVERSE
Match: At2G41060.1 score: 286 e-value: 4e-77 Identity: 65.44% Span: 648bp (36.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:17134216-17135571 FORWARD
Match: At2G41060.2 score: 286 e-value: 4e-77 Identity: 65.44% Span: 648bp (36.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:17134216-17135571 FORWARD
Match: At3G15010.1 score: 200 e-value: 3e-51 Identity: 47.69% Span: 648bp (36.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:5052851-5054065 FORWARD
Match: At3G15010.2 score: 200 e-value: 3e-51 Identity: 47.69% Span: 648bp (36.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:5052851-5054065 FORWARD
Match: At2G22090.1 score: 119 e-value: 8e-27 Identity: 51.38% Span: 327bp (18.4%) Frame: 3
Symbols: UBA1A | UBA1A; AU-specific RNA binding / RNA binding | chr2:9395651-9397530 REVERSE
Match: At2G22090.2 score: 119 e-value: 8e-27 Identity: 51.38% Span: 327bp (18.4%) Frame: 3
Symbols: UBA1A | UBA1A; RNA binding | chr2:9396487-9397530 REVERSE
Match: At2G19380.1 score: 110 e-value: 3e-24 Identity: 48.62% Span: 327bp (18.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:8390938-8393686 FORWARD
Match: At2G22100.1 score: 104 e-value: 2e-22 Identity: 46.73% Span: 321bp (18.1%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:9399477-9400625 REVERSE
Match: At1G17640.1 score: 79 e-value: 9e-15 Identity: 27.78% Span: 474bp (26.7%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE
Match: At1G76460.1 score: 74.3 e-value: 2e-13 Identity: 44.3% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE
Match: At5G40490.1 score: 72.8 e-value: 6e-13 Identity: 25.86% Span: 498bp (28.1%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD
Match: At1G22330.1 score: 71.6 e-value: 1e-12 Identity: 37.97% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:7886682-7887571 FORWARD
Match: At1G20880.1 score: 71.2 e-value: 2e-12 Identity: 41.77% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:7262868-7264823 REVERSE
Match: At1G22910.2 score: 69.7 e-value: 5e-12 Identity: 40.51% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:8105797-8107607 FORWARD
Match: At1G22910.1 score: 69.7 e-value: 5e-12 Identity: 40.51% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:8105797-8107648 FORWARD
Match: At1G22910.3 score: 69.7 e-value: 5e-12 Identity: 40.51% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:8105797-8107938 FORWARD
Match: At1G78260.1 score: 68.2 e-value: 2e-11 Identity: 36.71% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:29452210-29455074 FORWARD
Match: At4G14300.1 score: 68.2 e-value: 2e-11 Identity: 26.29% Span: 504bp (28.4%) Frame: 3
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD
Match: At1G78260.2 score: 68.2 e-value: 2e-11 Identity: 36.71% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:29452210-29454139 FORWARD
Match: At2G22090.1 score: 66.2 e-value: 6e-11 Identity: 40.23% Span: 261bp (14.7%) Frame: 3
Symbols: UBA1A | UBA1A; AU-specific RNA binding / RNA binding | chr2:9395651-9397530 REVERSE
Match: At2G22090.2 score: 66.2 e-value: 6e-11 Identity: 40.23% Span: 261bp (14.7%) Frame: 3
Symbols: UBA1A | UBA1A; RNA binding | chr2:9396487-9397530 REVERSE
Match: At5G53680.1 score: 65.9 e-value: 8e-11 Identity: 40.51% Span: 237bp (13.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:21815608-21816335 FORWARD
Match: At1G33470.1 score: 65.9 e-value: 8e-11 Identity: 38.75% Span: 240bp (13.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD
Match: At1G33470.2 score: 65.9 e-value: 8e-11 Identity: 38.75% Span: 240bp (13.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD

swissprot [blastx] Showing best 44 hits recorded
Match: Q60668 score: 100 e-value: 3e-20 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus GN=Hnrnpd PE=1 SV=2
Match: Q14103 score: 100 e-value: 3e-20 Identity: 32.5% Span: 480bp (27.0%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens GN=HNRNPD PE=1 SV=1
Match: Q9JJ54 score: 99.4 e-value: 6e-20 Identity: 31.88% Span: 480bp (27.0%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus GN=Hnrnpd PE=2 SV=1
Match: Q5ZI72 score: 95.9 e-value: 7e-19 Identity: 31.85% Span: 471bp (26.5%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like OS=Gallus gallus GN=HNRPDL PE=2 SV=1
Match: Q3SWU3 score: 95.1 e-value: 1e-18 Identity: 31.85% Span: 471bp (26.5%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus GN=Hnrpdl PE=2 SV=1
Match: Q640A2 score: 95.1 e-value: 1e-18 Identity: 30.68% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like OS=Xenopus tropicalis GN=hnrpdl PE=2 SV=1
Match: Q9Z130 score: 95.1 e-value: 1e-18 Identity: 31.85% Span: 471bp (26.5%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus GN=Hnrpdl PE=1 SV=1
Match: O14979 score: 95.1 e-value: 1e-18 Identity: 31.85% Span: 471bp (26.5%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like OS=Homo sapiens GN=HNRPDL PE=1 SV=3
Match: Q7ZX83 score: 94.4 e-value: 2e-18 Identity: 30.68% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like-A OS=Xenopus laevis GN=hnrpdl-A PE=2 SV=1
Match: Q99020 score: 94.4 e-value: 2e-18 Identity: 30.9% Span: 534bp (30.1%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus GN=Hnrnpab PE=1 SV=1
Match: Q6NU14 score: 90.1 e-value: 4e-17 Identity: 30.57% Span: 471bp (26.5%) Frame: 3
Heterogeneous nuclear ribonucleoprotein D-like-B OS=Xenopus laevis GN=hnrpdl-B PE=2 SV=1
Match: Q99729 score: 89.4 e-value: 6e-17 Identity: 30.73% Span: 534bp (30.1%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A/B OS=Homo sapiens GN=HNRNPAB PE=1 SV=2
Match: P51990 score: 88.6 e-value: 1e-16 Identity: 29.14% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis PE=2 SV=1
Match: P51989 score: 87.4 e-value: 2e-16 Identity: 29.14% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis PE=2 SV=1
Match: Q5RBU8 score: 86.3 e-value: 5e-16 Identity: 27.43% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abelii GN=HNRNPA2B1 PE=2 SV=1
Match: O43347 score: 85.9 e-value: 7e-16 Identity: 25.54% Span: 546bp (30.8%) Frame: 3
RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1
Match: Q08473 score: 85.5 e-value: 9e-16 Identity: 26.11% Span: 540bp (30.4%) Frame: 3
RNA-binding protein squid OS=Drosophila melanogaster GN=sqd PE=1 SV=3
Match: Q99383 score: 85.1 e-value: 1e-15 Identity: 27.27% Span: 561bp (31.6%) Frame: 3
Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1
Match: Q61474 score: 85.1 e-value: 1e-15 Identity: 25.54% Span: 546bp (30.8%) Frame: 3
RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1
Match: Q8K3P4 score: 85.1 e-value: 1e-15 Identity: 25.54% Span: 546bp (30.8%) Frame: 3
RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1
Match: O88569 score: 84 e-value: 3e-15 Identity: 26.86% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus GN=Hnrnpa2b1 PE=1 SV=2
Match: Q2HJ60 score: 84 e-value: 3e-15 Identity: 26.86% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus GN=HNRNPA2B1 PE=2 SV=1
Match: P22626 score: 84 e-value: 3e-15 Identity: 26.86% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2
Match: Q9TTV2 score: 83.6 e-value: 3e-15 Identity: 26.86% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Saguinus oedipus GN=HNRNPA2B1 PE=1 SV=1
Match: Q32P51 score: 82.8 e-value: 6e-15 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1-like protein OS=Homo sapiens GN=HNRNPA1L
Match: P09867 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1 PE=1 SV=2
Match: P04256 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3
Match: P51991 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2
Match: Q8BG05 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus GN=Hnrnpa3 PE=1 SV=1
Match: P0C7M2 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Putative heterogeneous nuclear ribonucleoprotein A1-like 3 OS=Homo sapiens GN=HNRPA1L3 PE=5 SV=1
Match: P09651 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5
Match: A5A6H4 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1
Match: P49312 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2
Match: Q6URK4 score: 82 e-value: 1e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus GN=Hnrnpa3 PE=1 SV=1
Match: Q920Q6 score: 81.6 e-value: 1e-14 Identity: 24.86% Span: 519bp (29.2%) Frame: 3
RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1
Match: Q96DH6 score: 81.6 e-value: 1e-14 Identity: 24.86% Span: 519bp (29.2%) Frame: 3
RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1
Match: Q28521 score: 81.3 e-value: 2e-14 Identity: 27.62% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta GN=HNRNPA1 PE=2 SV=3
Match: P17130 score: 80.9 e-value: 2e-14 Identity: 27.43% Span: 525bp (29.6%) Frame: 3
Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus laevis GN=hnrnpa1 PE=2 SV=1
Match: Q8SR30 score: 77.8 e-value: 2e-13 Identity: 30.86% Span: 525bp (29.6%) Frame: 3
Polyadenylate-binding protein, cytoplasmic and nuclear OS=Encephalitozoon cuniculi GN=PAB1
Match: P51968 score: 77.4 e-value: 2e-13 Identity: 26.52% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis PE=2 SV=1
Match: P07909 score: 75.9 e-value: 7e-13 Identity: 28.33% Span: 537bp (30.3%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster GN=Hrb98DE PE=1 SV=1
Match: P51992 score: 75.9 e-value: 7e-13 Identity: 26.52% Span: 540bp (30.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis PE=2 SV=1
Match: Q22037 score: 72.8 e-value: 6e-12 Identity: 26.92% Span: 546bp (30.8%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis elegans GN=hrp-1 PE=1 SV=1
Match: Q13151 score: 70.5 e-value: 3e-11 Identity: 27.01% Span: 522bp (29.4%) Frame: 3
Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens GN=HNRNPA0 PE=1 SV=1