| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|83283987|gb|ABC01901.1| |
score: 582 |
e-value: 3e-164 |
Identity: 99.01% |
Span: 909bp (49.2%) |
Frame: 1 |
| 3'-5'-exoribonuclease/RNA binding-like protein [Solanum tuberosum] |
| Match: gi|83283957|gb|ABC01886.1| |
score: 544 |
e-value: 1e-152 |
Identity: 92.38% |
Span: 906bp (49.1%) |
Frame: 1 |
| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum tuberosum] |
| Match: gi|15218985|ref|NP_176216.1| |
score: 415 |
e-value: 6e-114 |
Identity: 70.47% |
Span: 885bp (47.9%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi4249388|gb|AAD14485.1| Similar to gb|... |
| Match: gi|108864299|gb|ABG22460.1| |
score: 374 |
e-value: 1e-101 |
Identity: 61.92% |
Span: 906bp (49.1%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >... |
| Match: gi|147852316|emb|CAN82224.1| |
score: 361 |
e-value: 1e-97 |
Identity: 65.47% |
Span: 903bp (48.9%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|115485229|ref|NP_001067758.1| |
score: 358 |
e-value: 9e-97 |
Identity: 62.9% |
Span: 849bp (46.0%) |
Frame: 1 |
| Os11g0311300 [Oryza sativa (japonica cultivar-group)] >gi113644980|dbj|BAF28121.1| Os11g0311300 [Oryza sativa Japonic... |
| Match: gi|212721556|ref|NP_001131768.1| |
score: 356 |
e-value: 3e-96 |
Identity: 61.26% |
Span: 906bp (49.1%) |
Frame: 1 |
| hypothetical protein LOC100193137 [Zea mays] >gi194692484|gb|ACF80326.1| unknown [Zea mays] >gi|195623954|gb|ACG33807... |
| Match: gi|195621578|gb|ACG32619.1| |
score: 345 |
e-value: 6e-93 |
Identity: 60.14% |
Span: 873bp (47.3%) |
Frame: 1 |
| exosome |
| Match: gi|168006598|ref|XP_001755996.1| |
score: 319 |
e-value: 5e-85 |
Identity: 50.34% |
Span: 858bp (46.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162692926|gb|EDQ79281.1| predicted protein [Physcomitrella... |
| Match: gi|194694796|gb|ACF81482.1| |
score: 254 |
e-value: 1e-65 |
Identity: 61.61% |
Span: 633bp (34.3%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|157348700|emb|CAO23592.1| |
score: 249 |
e-value: 8e-64 |
Identity: 80.13% |
Span: 468bp (25.4%) |
Frame: 1 |
| unnamed |
| Match: gi|147860527|emb|CAN81874.1| |
score: 223 |
e-value: 4e-56 |
Identity: 77.4% |
Span: 528bp (28.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|34978809|gb|AAL13083.1| |
score: 209 |
e-value: 5e-52 |
Identity: 71.84% |
Span: 522bp (28.3%) |
Frame: 1 |
| putative translation-initiation factor 3 subunit [Prunus avium] |
| Match: gi|159464609|ref|XP_001690534.1| |
score: 207 |
e-value: 3e-51 |
Identity: 38.13% |
Span: 888bp (48.1%) |
Frame: 1 |
| hypothetical protein CHLREDRAFT_114378 [Chlamydomonas reinhardtii] >gi158280034|gb|EDP05793.1| predicted protein [Chl... |
| Match: gi|62733253|gb|AAX95370.1| |
score: 206 |
e-value: 4e-51 |
Identity: 66% |
Span: 450bp (24.4%) |
Frame: 1 |
| 3' exoribonuclease family, domain 1, putative [Oryza sativa Japonica Group] |
| Match: gi|157348701|emb|CAO23593.1| |
score: 206 |
e-value: 4e-51 |
Identity: 82.03% |
Span: 384bp (20.8%) |
Frame: 1 |
| unnamed |
| Match: gi|219458813|ref|XP_002227127.1| |
score: 201 |
e-value: 2e-49 |
Identity: 36.36% |
Span: 849bp (46.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|72061093|ref|XP_783510.1| |
score: 196 |
e-value: 8e-48 |
Identity: 35.56% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|92893881|gb|ABE91931.1| |
score: 196 |
e-value: 8e-48 |
Identity: 63.84% |
Span: 528bp (28.6%) |
Frame: 1 |
| Proteasome component region PCI; Eukaryotic translation initiation factor 3 subunit 8, C-terminal; Eukaryotic transla... |
| Match: gi|6685540|sp|Q9XHM1|EIF3C_MEDTR |
score: 194 |
e-value: 2e-47 |
Identity: 63.13% |
Span: 528bp (28.6%) |
Frame: 1 |
| Eukaryotic |
| Match: gi|72041533|ref|XP_796992.1| |
score: 194 |
e-value: 2e-47 |
Identity: 35.56% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|196005309|ref|XP_002112521.1| |
score: 194 |
e-value: 3e-47 |
Identity: 37.05% |
Span: 831bp (45.0%) |
Frame: 1 |
| hypothetical protein TRIADDRAFT_25085 [Trichoplax adhaerens] >gi190584562|gb|EDV24631.1| hypothetical protein TRIADDR... |
| Match: gi|15228840|ref|NP_191174.1| |
score: 193 |
e-value: 5e-47 |
Identity: 80.51% |
Span: 354bp (19.2%) |
Frame: 1 |
| EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C); translation initiation factor [Arabidopsis thaliana] >gi23503063... |
| Match: gi|2789660|gb|AAC83464.1| |
score: 193 |
e-value: 5e-47 |
Identity: 80.51% |
Span: 354bp (19.2%) |
Frame: 1 |
| eIF3c [Arabidopsis thaliana] |
| Match: gi|149635838|ref|XP_001511768.1| |
score: 191 |
e-value: 3e-46 |
Identity: 35.21% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|156363851|ref|XP_001626253.1| |
score: 189 |
e-value: 1e-45 |
Identity: 34.28% |
Span: 846bp (45.8%) |
Frame: 1 |
| predicted |
| Match: gi|149064770|gb|EDM14921.1| |
score: 188 |
e-value: 1e-45 |
Identity: 34.86% |
Span: 849bp (46.0%) |
Frame: 1 |
| exosome |
| Match: gi|109120492|ref|XP_001085228.1| |
score: 187 |
e-value: 3e-45 |
Identity: 33.8% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|148703331|gb|EDL35278.1| |
score: 187 |
e-value: 4e-45 |
Identity: 34.98% |
Span: 846bp (45.8%) |
Frame: 1 |
| exosome |
| Match: gi|122920909|pdb|2NN6|C |
score: 186 |
e-value: 5e-45 |
Identity: 33.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| Chain |
| Match: gi|60359866|dbj|BAD90152.1| |
score: 186 |
e-value: 8e-45 |
Identity: 34.63% |
Span: 846bp (45.8%) |
Frame: 1 |
| mKIAA4013 |
| Match: gi|21759414|sp|Q9D753|EXOS8_MOUSE |
score: 186 |
e-value: 8e-45 |
Identity: 34.63% |
Span: 846bp (45.8%) |
Frame: 1 |
| Exosome |
| Match: gi|148225933|ref|NP_001079391.1| |
score: 186 |
e-value: 8e-45 |
Identity: 35.31% |
Span: 855bp (46.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|73993245|ref|XP_534492.2| |
score: 186 |
e-value: 5e-45 |
Identity: 34.51% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|114649397|ref|XP_522661.2| |
score: 186 |
e-value: 8e-45 |
Identity: 33.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|31415882|ref|NP_852480.1| |
score: 186 |
e-value: 5e-45 |
Identity: 33.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| gi|31415882|ref|NP_852480.1| Opa-interacting protein 2 [Homo sapiens] gi|21759409|sp|Q96B26|RR43_HUMAN Exosome comple... |
| Match: gi|182889712|gb|AAI65543.1| |
score: 186 |
e-value: 8e-45 |
Identity: 37.41% |
Span: 831bp (45.0%) |
Frame: 1 |
| Exosc8 protein [Danio rerio] |
| Match: gi|66267273|gb|AAH95236.1| |
score: 186 |
e-value: 8e-45 |
Identity: 37.41% |
Span: 831bp (45.0%) |
Frame: 1 |
| Exosome |
| Match: gi|50838810|ref|NP_001002865.1| |
score: 186 |
e-value: 6e-45 |
Identity: 37.41% |
Span: 831bp (45.0%) |
Frame: 1 |
| exosome |
| Match: gi|56118510|ref|NP_001007919.1| |
score: 185 |
e-value: 1e-44 |
Identity: 34.62% |
Span: 855bp (46.3%) |
Frame: 1 |
| exosc8 |
| Match: gi|55957290|emb|CAI14013.1| |
score: 185 |
e-value: 1e-44 |
Identity: 33.1% |
Span: 849bp (46.0%) |
Frame: 1 |
| gi|55957290|emb|CAI14013.1| RP11-421P11.3 [Homo sapiens] |
| Match: gi|149730159|ref|XP_001495596.1| |
score: 185 |
e-value: 1e-44 |
Identity: 33.8% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|119628984|gb|EAX08579.1| |
score: 184 |
e-value: 2e-44 |
Identity: 33.22% |
Span: 846bp (45.8%) |
Frame: 1 |
| exosome |
| Match: gi|45595709|gb|AAH67250.1| |
score: 184 |
e-value: 3e-44 |
Identity: 34.89% |
Span: 831bp (45.0%) |
Frame: 1 |
| gi|45595709|gb|AAH67250.1| Exosc8 protein [Mus musculus] |
| Match: gi|40254486|ref|NP_081424.2| |
score: 184 |
e-value: 2e-44 |
Identity: 34.63% |
Span: 846bp (45.8%) |
Frame: 1 |
| gi|40254486|ref|NP_081424.2| CBP-interacting protein 3 [Mus musculus] >gi|37589850|gb|AAH59089.1| CBP-interacting pro... |
| Match: gi|47227071|emb|CAG00433.1| |
score: 182 |
e-value: 9e-44 |
Identity: 35.13% |
Span: 834bp (45.2%) |
Frame: 1 |
| gi|47227071|emb|CAG00433.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|126327460|ref|XP_001368047.1| |
score: 182 |
e-value: 1e-43 |
Identity: 33.8% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|148230376|ref|NP_001088781.1| |
score: 181 |
e-value: 2e-43 |
Identity: 34.62% |
Span: 855bp (46.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|157311761|ref|NP_001098617.1| |
score: 181 |
e-value: 3e-43 |
Identity: 36.69% |
Span: 831bp (45.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|218189954|gb|EEC72381.1| |
score: 180 |
e-value: 4e-43 |
Identity: 62.92% |
Span: 522bp (28.3%) |
Frame: 1 |
| hypothetical protein OsI_05653 [Oryza sativa Indica Group] |
| Match: gi|170039450|ref|XP_001847547.1| |
score: 180 |
e-value: 4e-43 |
Identity: 34.26% |
Span: 858bp (46.5%) |
Frame: 1 |
| exosome complex exonuclease RRP43 [Culex quinquefasciatus] >gi167863024|gb|EDS26407.1| exosome complex exonuclease RR... |
| Match: gi|115470411|ref|NP_001058804.1| |
score: 180 |
e-value: 4e-43 |
Identity: 61.11% |
Span: 522bp (28.3%) |
Frame: 1 |
| Os07g0124500 [Oryza sativa (japonica cultivar-group)] >gi28201304|dbj|BAC56812.1| putative Eukaryotic translation ini... |
| Match: gi|41053020|dbj|BAD07951.1| |
score: 180 |
e-value: 4e-43 |
Identity: 62.92% |
Span: 522bp (28.3%) |
Frame: 1 |
| putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa Japonica Group] |
| Match: gi|218199022|gb|EEC81449.1| |
score: 180 |
e-value: 4e-43 |
Identity: 61.11% |
Span: 522bp (28.3%) |
Frame: 1 |
| hypothetical protein OsI_24739 [Oryza sativa Indica Group] |
| Match: gi|125598980|gb|EAZ38556.1| |
score: 180 |
e-value: 4e-43 |
Identity: 61.11% |
Span: 522bp (28.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|157348568|emb|CAO23460.1| |
score: 180 |
e-value: 4e-43 |
Identity: 85.85% |
Span: 318bp (17.2%) |
Frame: 1 |
| unnamed |
| Match: gi|170056939|ref|XP_001864258.1| |
score: 179 |
e-value: 8e-43 |
Identity: 34.26% |
Span: 858bp (46.5%) |
Frame: 1 |
| exosome complex exonuclease RRP43 [Culex quinquefasciatus] >gi167876545|gb|EDS39928.1| exosome complex exonuclease RR... |
| Match: gi|118601810|ref|NP_001073074.1| |
score: 179 |
e-value: 6e-43 |
Identity: 33.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| exosome |
| Match: gi|2815604|gb|AAC39558.1| |
score: 179 |
e-value: 8e-43 |
Identity: 33.7% |
Span: 816bp (44.2%) |
Frame: 1 |
| gi|2815604|gb|AAC39558.1| Opa-interacting protein OIP2 [Homo sapiens] |
| Match: gi|91081401|ref|XP_972667.1| |
score: 178 |
e-value: 1e-42 |
Identity: 32.04% |
Span: 852bp (46.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|109120494|ref|XP_001084987.1| |
score: 178 |
e-value: 2e-42 |
Identity: 33.58% |
Span: 819bp (44.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|115443907|ref|NP_001045733.1| |
score: 177 |
e-value: 4e-42 |
Identity: 75.42% |
Span: 354bp (19.2%) |
Frame: 1 |
| Os02g0123300 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|168000334|ref|XP_001752871.1| |
score: 176 |
e-value: 5e-42 |
Identity: 58.52% |
Span: 528bp (28.6%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162696034|gb|EDQ82375.1| predicted protein [Physcomitrella... |
| Match: gi|157107418|ref|XP_001649768.1| |
score: 176 |
e-value: 8e-42 |
Identity: 33.69% |
Span: 846bp (45.8%) |
Frame: 1 |
| exosome |
| Match: gi|74146647|dbj|BAE41329.1| |
score: 175 |
e-value: 1e-41 |
Identity: 34.7% |
Span: 801bp (43.4%) |
Frame: 1 |
| unnamed |
| Match: gi|168021694|ref|XP_001763376.1| |
score: 174 |
e-value: 2e-41 |
Identity: 41.99% |
Span: 876bp (47.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162685511|gb|EDQ71906.1| predicted protein [Physcomitrella... |
| Match: gi|114649399|ref|XP_001147508.1| |
score: 170 |
e-value: 5e-40 |
Identity: 33.87% |
Span: 741bp (40.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|66529825|ref|XP_624000.1| |
score: 170 |
e-value: 4e-40 |
Identity: 32.4% |
Span: 855bp (46.3%) |
Frame: 1 |
| gi|66529825|ref|XP_624000.1| PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal RNA processing protei... |
| Match: gi|62734004|gb|AAX96113.1| |
score: 168 |
e-value: 2e-39 |
Identity: 64.57% |
Span: 381bp (20.6%) |
Frame: 1 |
| expressed |
| Match: gi|118792101|ref|XP_320154.3| |
score: 163 |
e-value: 6e-38 |
Identity: 30% |
Span: 840bp (45.5%) |
Frame: 1 |
| ENSANGP00000011759 |
| Match: gi|198426220|ref|XP_002120565.1| |
score: 162 |
e-value: 1e-37 |
Identity: 33.33% |
Span: 828bp (44.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|194040557|ref|XP_001927006.1| |
score: 161 |
e-value: 2e-37 |
Identity: 31.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|168038316|ref|XP_001771647.1| |
score: 160 |
e-value: 3e-37 |
Identity: 66.94% |
Span: 363bp (19.7%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162677086|gb|EDQ63561.1| predicted protein [Physcomitrella... |
| Match: gi|219458811|ref|XP_002227126.1| |
score: 160 |
e-value: 3e-37 |
Identity: 34.85% |
Span: 783bp (42.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|168000021|ref|XP_001752715.1| |
score: 160 |
e-value: 4e-37 |
Identity: 65.69% |
Span: 411bp (22.3%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162696246|gb|EDQ82586.1| predicted protein [Physcomitrella... |
| Match: gi|193664372|ref|XP_001942983.1| |
score: 159 |
e-value: 1e-36 |
Identity: 33.7% |
Span: 810bp (43.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|170091308|ref|XP_001876876.1| |
score: 156 |
e-value: 7e-36 |
Identity: 32.25% |
Span: 819bp (44.4%) |
Frame: 1 |
| predicted |
| Match: gi|212507832|gb|EEB11694.1| |
score: 156 |
e-value: 5e-36 |
Identity: 32.14% |
Span: 837bp (45.3%) |
Frame: 1 |
| Exosome |
| Match: gi|73993249|ref|XP_857305.1| |
score: 150 |
e-value: 3e-34 |
Identity: 37.5% |
Span: 573bp (31.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|114649403|ref|XP_001147354.1| |
score: 150 |
e-value: 4e-34 |
Identity: 36.46% |
Span: 573bp (31.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|59006476|emb|CAI46226.1| |
score: 149 |
e-value: 8e-34 |
Identity: 30.28% |
Span: 849bp (46.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|19113177|ref|NP_596385.1| |
score: 148 |
e-value: 2e-33 |
Identity: 31.09% |
Span: 801bp (43.4%) |
Frame: 1 |
| gi|19113177|ref|NP_596385.1| putative exoribonuclease [Schizosaccharomyces pombe] gi|1723274|sp|Q10205|RR43_SCHPO Put... |
| Match: gi|213408869|ref|XP_002175205.1| |
score: 147 |
e-value: 2e-33 |
Identity: 31.25% |
Span: 813bp (44.0%) |
Frame: 1 |
| exosome |
| Match: gi|156553642|ref|XP_001600402.1| |
score: 147 |
e-value: 3e-33 |
Identity: 29.93% |
Span: 849bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|145344856|ref|XP_001416940.1| |
score: 143 |
e-value: 6e-32 |
Identity: 33.1% |
Span: 864bp (46.8%) |
Frame: 1 |
| predicted |
| Match: gi|20093818|ref|NP_613665.1| |
score: 141 |
e-value: 2e-31 |
Identity: 30.98% |
Span: 762bp (41.3%) |
Frame: 1 |
| gi|20093818|ref|NP_613665.1| Predicted exosome subunit, predicted exoribonuclease related to RNase PH [Methanopyrus k... |
| Match: gi|71022771|ref|XP_761615.1| |
score: 138 |
e-value: 1e-30 |
Identity: 29.5% |
Span: 855bp (46.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|73993247|ref|XP_857268.1| |
score: 138 |
e-value: 2e-30 |
Identity: 39.87% |
Span: 474bp (25.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|15678709|ref|NP_275825.1| |
score: 138 |
e-value: 2e-30 |
Identity: 31.44% |
Span: 786bp (42.6%) |
Frame: 1 |
| gi|15678709|ref|NP_275825.1| conserved protein [Methanothermobacter thermautotrophicus] gi|29336572|sp|O26778|ECX2_ME... |
| Match: gi|156937004|ref|YP_001434800.1| |
score: 137 |
e-value: 3e-30 |
Identity: 32.71% |
Span: 798bp (43.2%) |
Frame: 1 |
| exosome |
| Match: gi|164657360|ref|XP_001729806.1| |
score: 136 |
e-value: 6e-30 |
Identity: 28.53% |
Span: 891bp (48.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|15228885|ref|NP_188926.1| |
score: 135 |
e-value: 2e-29 |
Identity: 59.32% |
Span: 354bp (19.2%) |
Frame: 1 |
| gi|15228885|ref|NP_188926.1| eukaryotic translation initiation factor 3 (subunit 8) [Arabidopsis thaliana] gi|1199471... |
| Match: gi|159040755|ref|YP_001540007.1| |
score: 134 |
e-value: 3e-29 |
Identity: 32.61% |
Span: 690bp (37.4%) |
Frame: 1 |
| exosome |
| Match: gi|66801297|ref|XP_629574.1| |
score: 134 |
e-value: 3e-29 |
Identity: 26.55% |
Span: 843bp (45.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|170290982|ref|YP_001737798.1| |
score: 132 |
e-value: 1e-28 |
Identity: 31.82% |
Span: 792bp (42.9%) |
Frame: 1 |
| 3' |
| Match: gi|148703326|gb|EDL35273.1| |
score: 130 |
e-value: 4e-28 |
Identity: 32.74% |
Span: 666bp (36.1%) |
Frame: 1 |
| exosome |
| Match: gi|124027457|ref|YP_001012777.1| |
score: 129 |
e-value: 7e-28 |
Identity: 29.41% |
Span: 858bp (46.5%) |
Frame: 1 |
| RNase |
| Match: gi|14601411|ref|NP_147948.1| |
score: 129 |
e-value: 9e-28 |
Identity: 29.06% |
Span: 702bp (38.0%) |
Frame: 1 |
| gi|14601411|ref|NP_147948.1| autoantigen [Aeropyrum pernix] gi|29337018|sp|Q9YC05|ECX2_AERPE Probable exosome complex... |
| Match: gi|62733251|gb|AAX95368.1| |
score: 127 |
e-value: 4e-27 |
Identity: 51.97% |
Span: 381bp (20.6%) |
Frame: 1 |
| 3' |
| Match: gi|212223176|ref|YP_002306412.1| |
score: 126 |
e-value: 6e-27 |
Identity: 29.62% |
Span: 858bp (46.5%) |
Frame: 1 |
| 3'-5' |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
| Match: At1G60080.1 |
score: 415 |
e-value: 4e-116 |
Identity: 70.47% |
Span: 885bp (47.9%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr1:22156270-22158004 REVERSE |
| Match: At3G56150.1 |
score: 193 |
e-value: 3e-49 |
Identity: 80.51% |
Span: 354bp (19.2%) |
Frame: 1 |
| Symbols: ATEIF3C-1, EIF3C-1, ATTIF3C1, TIF3C1, EIF3C | EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3) | chr3:208... |
| Match: At3G22860.1 |
score: 135 |
e-value: 1e-31 |
Identity: 59.32% |
Span: 354bp (19.2%) |
Frame: 1 |
| Symbols: ATEIF3C-2, EIF3C-2, ATTIF3C2, TIF3C2 | TIF3C2 (eukaryotic translation initiation factor 3 subunit C2); tran... |
| Match: At3G12990.2 |
score: 113 |
e-value: 4e-25 |
Identity: 28.1% |
Span: 816bp (44.2%) |
Frame: 1 |
| Symbols: RRP45A | 3'-5'-exoribonuclease/ RNA binding | chr3:4156352-4157849 FORWARD |
| Match: At3G12990.1 |
score: 113 |
e-value: 4e-25 |
Identity: 28.1% |
Span: 816bp (44.2%) |
Frame: 1 |
| Symbols: RRP45A | 3' exoribonuclease family protein | chr3:4156352-4157849 FORWARD |
| Match: At3G60500.1 |
score: 110 |
e-value: 4e-24 |
Identity: 26.52% |
Span: 834bp (45.2%) |
Frame: 1 |
| Symbols: G3, CER7 | 3' exoribonuclease family protein | chr3:22365220-22367415 FORWARD |
| Match: At3G60500.2 |
score: 110 |
e-value: 4e-24 |
Identity: 26.52% |
Span: 834bp (45.2%) |
Frame: 1 |
| Symbols: G3, CER7 | 3' exoribonuclease family protein | chr3:22365220-22367415 FORWARD |
| Match: At3G07750.2 |
score: 103 |
e-value: 4e-22 |
Identity: 28.98% |
Span: 819bp (44.4%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:2473492-2475224 FORWARD |
| Match: At3G07750.1 |
score: 103 |
e-value: 4e-22 |
Identity: 28.98% |
Span: 819bp (44.4%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:2473492-2475224 FORWARD |
|
| swissprot [blastx] | Showing best 37 hits recorded |
| Match: Q9XHM1 |
score: 194 |
e-value: 1e-48 |
Identity: 63.13% |
Span: 528bp (28.6%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Medicago truncatula GN=TIF3C1 PE=2 SV=1 |
| Match: O49160 |
score: 193 |
e-value: 3e-48 |
Identity: 80.51% |
Span: 354bp (19.2%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Arabidopsis thaliana GN=TIF3C1 PE=1 SV=2 |
| Match: Q9D753 |
score: 186 |
e-value: 5e-46 |
Identity: 34.63% |
Span: 846bp (45.8%) |
Frame: 1 |
| Exosome complex exonuclease RRP43 OS=Mus musculus GN=Exosc8 PE=2 SV=1 |
| Match: Q96B26 |
score: 186 |
e-value: 3e-46 |
Identity: 33.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| Exosome complex exonuclease RRP43 OS=Homo sapiens GN=EXOSC8 PE=1 SV=1 |
| Match: Q2KHU3 |
score: 179 |
e-value: 4e-44 |
Identity: 33.45% |
Span: 849bp (46.0%) |
Frame: 1 |
| Exosome complex exonuclease RRP43 OS=Bos taurus GN=EXOSC8 PE=2 SV=1 |
| Match: Q10205 |
score: 148 |
e-value: 1e-34 |
Identity: 31.09% |
Span: 801bp (43.4%) |
Frame: 1 |
| Exosome complex component rrp43 OS=Schizosaccharomyces pombe GN=rrp43 PE=2 SV=1 |
| Match: Q8TYC2 |
score: 141 |
e-value: 1e-32 |
Identity: 30.98% |
Span: 762bp (41.3%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Methanopyrus kandleri GN=MK0380 PE=3 SV=1 |
| Match: O26778 |
score: 138 |
e-value: 1e-31 |
Identity: 31.44% |
Span: 786bp (42.6%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Methanobacterium thermoautotrophicum GN=MTH_682 PE=3 SV=1 |
| Match: Q9YC05 |
score: 129 |
e-value: 6e-29 |
Identity: 29.06% |
Span: 702bp (38.0%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Aeropyrum pernix GN=APE_1445 PE=3 SV=1 |
| Match: Q8PTT7 |
score: 125 |
e-value: 8e-28 |
Identity: 27.78% |
Span: 810bp (43.9%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Methanosarcina mazei GN=MM_2624 PE=3 SV=1 |
| Match: Q8U0M0 |
score: 124 |
e-value: 2e-27 |
Identity: 28.2% |
Span: 798bp (43.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Pyrococcus furiosus GN=PF1567 PE=3 SV=1 |
| Match: Q8TGX5 |
score: 123 |
e-value: 3e-27 |
Identity: 28.15% |
Span: 810bp (43.9%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Methanosarcina acetivorans GN=MA_1776 PE=3 SV=1 |
| Match: Q9V118 |
score: 122 |
e-value: 7e-27 |
Identity: 28.47% |
Span: 819bp (44.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Pyrococcus abyssi GN=PYRAB06110 PE=1 SV=1 |
| Match: O59224 |
score: 121 |
e-value: 1e-26 |
Identity: 28.83% |
Span: 819bp (44.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Pyrococcus horikoshii GN=PH1548 PE=3 SV=1 |
| Match: Q9UXC0 |
score: 121 |
e-value: 2e-26 |
Identity: 29.74% |
Span: 696bp (37.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Sulfolobus solfataricus GN=SSO0732 PE=1 SV=1 |
| Match: Q0W2Y7 |
score: 120 |
e-value: 3e-26 |
Identity: 29.43% |
Span: 795bp (43.1%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Uncultured methanogenic archaeon RC-I GN=UNCMA_09920 PE=3 SV=1 |
| Match: O29756 |
score: 117 |
e-value: 3e-25 |
Identity: 30.17% |
Span: 690bp (37.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Archaeoglobus fulgidus GN=AF_0494 PE=1 SV=1 |
| Match: Q5JIR7 |
score: 115 |
e-value: 1e-24 |
Identity: 30.31% |
Span: 756bp (41.0%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Pyrococcus kodakaraensis GN=TK1633 PE=3 SV=1 |
| Match: Q975G9 |
score: 115 |
e-value: 6e-25 |
Identity: 28.45% |
Span: 696bp (37.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Sulfolobus tokodaii GN=ST0442 PE=3 SV=1 |
| Match: Q8ZVN0 |
score: 109 |
e-value: 5e-23 |
Identity: 29.72% |
Span: 858bp (46.5%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Pyrobaculum aerophilum GN=PAE2206 |
| Match: Q3SYW6 |
score: 105 |
e-value: 7e-22 |
Identity: 44.92% |
Span: 354bp (19.2%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Bos taurus GN=EIF3C PE=2 SV=1 |
| Match: Q8R1B4 |
score: 105 |
e-value: 7e-22 |
Identity: 44.92% |
Span: 354bp (19.2%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus GN=Eif3c PE=1 SV=1 |
| Match: Q5RAT8 |
score: 105 |
e-value: 7e-22 |
Identity: 44.92% |
Span: 354bp (19.2%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Pongo abelii GN=EIF3C PE=2 SV=1 |
| Match: Q99613 |
score: 105 |
e-value: 7e-22 |
Identity: 44.92% |
Span: 354bp (19.2%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Homo sapiens GN=EIF3C PE=1 SV=1 |
| Match: Q3SWZ4 |
score: 99.8 |
e-value: 5e-20 |
Identity: 23.4% |
Span: 789bp (42.7%) |
Frame: 1 |
| Exosome complex exonuclease RRP45 OS=Bos taurus GN=EXOSC9 PE=2 SV=1 |
| Match: Q06265 |
score: 98.2 |
e-value: 1e-19 |
Identity: 23.02% |
Span: 789bp (42.7%) |
Frame: 1 |
| Exosome complex exonuclease RRP45 OS=Homo sapiens GN=EXOSC9 PE=1 SV=3 |
| Match: Q9JHI7 |
score: 97.8 |
e-value: 2e-19 |
Identity: 23.02% |
Span: 789bp (42.7%) |
Frame: 1 |
| Exosome complex exonuclease RRP45 OS=Mus musculus GN=Exosc9 PE=2 SV=1 |
| Match: Q4QR75 |
score: 97.8 |
e-value: 2e-19 |
Identity: 23.02% |
Span: 789bp (42.7%) |
Frame: 1 |
| Exosome complex exonuclease RRP45 OS=Rattus norvegicus GN=Exosc9 PE=2 SV=1 |
| Match: Q9HIP1 |
score: 97.4 |
e-value: 2e-19 |
Identity: 28.81% |
Span: 708bp (38.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Thermoplasma acidophilum GN=Ta1294 PE=3 SV=2 |
| Match: O74918 |
score: 94 |
e-value: 3e-18 |
Identity: 25.46% |
Span: 804bp (43.6%) |
Frame: 1 |
| Exosome complex component rrp45 OS=Schizosaccharomyces pombe GN=rrp45 PE=2 SV=1 |
| Match: Q97BZ4 |
score: 92 |
e-value: 1e-17 |
Identity: 28.19% |
Span: 681bp (36.9%) |
Frame: 1 |
| Probable exosome complex exonuclease 2 OS=Thermoplasma volcanium GN=TV0311 PE=3 SV=1 |
| Match: O14164 |
score: 84 |
e-value: 3e-15 |
Identity: 36.44% |
Span: 354bp (19.2%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Schizosaccharomyces pombe GN=nip1 PE=1 SV=2 |
| Match: Q15024 |
score: 83.2 |
e-value: 5e-15 |
Identity: 25.85% |
Span: 696bp (37.7%) |
Frame: 1 |
| Exosome complex exonuclease RRP42 OS=Homo sapiens GN=EXOSC7 PE=1 SV=2 |
| Match: O02328 |
score: 82.8 |
e-value: 6e-15 |
Identity: 34.96% |
Span: 357bp (19.3%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Caenorhabditis elegans GN=eif-3.C PE=2 SV=2 |
| Match: Q54X97 |
score: 79.3 |
e-value: 7e-14 |
Identity: 34.88% |
Span: 381bp (20.6%) |
Frame: 1 |
| Eukaryotic translation initiation factor 3 subunit C OS=Dictyostelium discoideum GN=eif3c |
| Match: Q05636 |
score: 78.6 |
e-value: 1e-13 |
Identity: 23.68% |
Span: 780bp (42.3%) |
Frame: 1 |
| Exosome complex component RRP45 OS=Saccharomyces cerevisiae GN=RRP45 PE=1 SV=1 |
| Match: Q9D0M0 |
score: 75.5 |
e-value: 1e-12 |
Identity: 26.69% |
Span: 696bp (37.7%) |
Frame: 1 |
| Exosome complex exonuclease RRP42 OS=Mus musculus GN=Exosc7 PE=2 SV=1 |
|
