| genbank/nr [blastx] | Showing best 80 hits recorded |
| Match: gi|13278055|gb|AAH03883.1| |
score: 354.4 |
e-value: 4.4e-96 |
Identity: 78.66% |
Span: 717bp (37.6%) |
Frame: 3 |
| gi|13278055|gb|AAH03883.1| Similar to RIKEN cDNA 2010107D16 gene [Mus musculus] |
| Match: gi|15239067|ref|NP_199096.1| |
score: 338.2 |
e-value: 3.3e-91 |
Identity: 72.84% |
Span: 702bp (36.8%) |
Frame: 3 |
| U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi4257354... |
| Match: gi|15217666|ref|NP_174086.1| |
score: 330.9 |
e-value: 5.2e-89 |
Identity: 79.91% |
Span: 639bp (33.5%) |
Frame: 3 |
| ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi75336... |
| Match: gi|15723293|gb|AAL06332.1| |
score: 330.9 |
e-value: 5.2e-89 |
Identity: 72.02% |
Span: 702bp (36.8%) |
Frame: 3 |
| gi|15723293|gb|AAL06332.1| U2 auxiliary factor small subunit [Arabidopsis thaliana] |
| Match: gi|15723291|gb|AAL06331.1| |
score: 324.7 |
e-value: 3.7e-87 |
Identity: 78.97% |
Span: 639bp (33.5%) |
Frame: 3 |
| gi|15723291|gb|AAL06331.1| U2 auxiliary factor small subunit [Arabidopsis thaliana] |
| Match: gi|3850816|emb|CAA77132.1| |
score: 318.9 |
e-value: 2.1e-85 |
Identity: 66.94% |
Span: 723bp (37.9%) |
Frame: 3 |
| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|3850819|emb|CAA77134.1| |
score: 317.4 |
e-value: 6e-85 |
Identity: 69.07% |
Span: 699bp (36.7%) |
Frame: 3 |
| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|3850818|emb|CAA77133.1| |
score: 317.4 |
e-value: 6e-85 |
Identity: 69.07% |
Span: 699bp (36.7%) |
Frame: 3 |
| gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|34910942|ref|NP_916818.1| |
score: 278.1 |
e-value: 4e-73 |
Identity: 85.37% |
Span: 492bp (25.8%) |
Frame: 3 |
| gi|34910942|ref|NP_916818.1| putative U2 snRNP auxiliary factor [Oryza sativa (japonica cultivar-group)] gi|20161586|... |
| Match: gi|47220971|emb|CAF98200.1| |
score: 243.4 |
e-value: 1.1e-62 |
Identity: 54.19% |
Span: 660bp (34.6%) |
Frame: 3 |
| gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|29126228|ref|NP_803432.1| |
score: 241.1 |
e-value: 5.5e-62 |
Identity: 53.65% |
Span: 690bp (36.2%) |
Frame: 3 |
| gi|29126228|ref|NP_803432.1| U2(RNU2) small nuclear RNA auxillary factor 1 [Danio rerio] gi|21105405|gb|AAM34646.1| U... |
| Match: gi|47226948|emb|CAG05840.1| |
score: 236.9 |
e-value: 1e-60 |
Identity: 56.67% |
Span: 627bp (32.9%) |
Frame: 3 |
| gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|46911414|emb|CAF29556.1| |
score: 235 |
e-value: 3.9e-60 |
Identity: 51.26% |
Span: 702bp (36.8%) |
Frame: 3 |
| gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens] |
| Match: gi|5803207|ref|NP_006749.1| |
score: 235 |
e-value: 3.9e-60 |
Identity: 51.68% |
Span: 702bp (36.8%) |
Frame: 3 |
| gi|5803207|ref|NP_006749.1| U2 small nuclear RNA auxillary factor 1; U2 snRNP auxiliary factor small subunit; splicin... |
| Match: gi|17368837|sp|Q9D883|U2AG_MOUSE |
score: 234.6 |
e-value: 5.1e-60 |
Identity: 57.56% |
Span: 603bp (31.6%) |
Frame: 3 |
| gi|17368837|sp|Q9D883|U2AG_MOUSE Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor 35 kDa subunit) (U2 snRNP a... |
| Match: gi|13235096|emb|CAC33541.1| |
score: 234.6 |
e-value: 5.1e-60 |
Identity: 57.56% |
Span: 603bp (31.6%) |
Frame: 3 |
| gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus] gi|13235098|emb|CAC33542.1| U2snRN... |
| Match: gi|4204470|gb|AAD13394.1| |
score: 234.2 |
e-value: 6.7e-60 |
Identity: 59% |
Span: 597bp (31.3%) |
Frame: 3 |
| gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes] |
| Match: gi|12805423|gb|AAH02184.1| |
score: 232.6 |
e-value: 1.9e-59 |
Identity: 57.35% |
Span: 600bp (31.5%) |
Frame: 3 |
| gi|12805423|gb|AAH02184.1| U2af1 protein [Mus musculus] |
| Match: gi|17530980|ref|NP_077149.1| |
score: 231.5 |
e-value: 4.3e-59 |
Identity: 57.07% |
Span: 603bp (31.6%) |
Frame: 3 |
| gi|17530980|ref|NP_077149.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1; U2 small nuclear ribonucle... |
| Match: gi|7512051|pir||JC6125 |
score: 225.3 |
e-value: 3.1e-57 |
Identity: 50.43% |
Span: 687bp (36.0%) |
Frame: 3 |
| gi|7512051|pir||JC6125 U2 small nuclear ribonucleoprotein auxiliary factor small chain - fruit fly (Drosophila melano... |
| Match: gi|17137284|ref|NP_477208.1| |
score: 224.6 |
e-value: 5.3e-57 |
Identity: 50% |
Span: 687bp (36.0%) |
Frame: 3 |
| gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38 CG3582-PA [Drosophila melanogaster] gi|... |
| Match: gi|25072205|ref|NP_739566.1| |
score: 223 |
e-value: 1.5e-56 |
Identity: 58.82% |
Span: 558bp (29.3%) |
Frame: 3 |
| gi|25072205|ref|NP_739566.1| U2 auxiliary factor 26; auxiliary factor 26 [Mus musculus] gi|34855699|ref|XP_341829.1| ... |
| Match: gi|31205983|ref|XP_311943.1| |
score: 222.6 |
e-value: 2e-56 |
Identity: 55.15% |
Span: 573bp (30.0%) |
Frame: 3 |
| gi|31205983|ref|XP_311943.1| ENSANGP00000011066 [Anopheles gambiae] gi|21295970|gb|EAA08115.1| ENSANGP00000011066 [An... |
| Match: gi|38084025|ref|XP_128982.2| |
score: 221.9 |
e-value: 3.4e-56 |
Identity: 49.79% |
Span: 714bp (37.4%) |
Frame: 3 |
| gi|38084025|ref|XP_128982.2| similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor 35 kDa subunit) (U2 ... |
| Match: gi|23479849|gb|EAA16571.1| |
score: 219.9 |
e-value: 1.3e-55 |
Identity: 45.49% |
Span: 735bp (38.5%) |
Frame: 3 |
| gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii] |
| Match: gi|23508391|ref|NP_701060.1| |
score: 215.7 |
e-value: 2.5e-54 |
Identity: 46.15% |
Span: 693bp (36.3%) |
Frame: 3 |
| gi|23508391|ref|NP_701060.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium falciparum 3D7] gi|234961... |
| Match: gi|46228867|gb|EAK89737.1| |
score: 209.9 |
e-value: 1.3e-52 |
Identity: 43.5% |
Span: 630bp (33.0%) |
Frame: 3 |
| gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit CCCh+RRM+CCCh-like [Cryp... |
| Match: gi|19115857|ref|NP_594945.1| |
score: 208 |
e-value: 5.1e-52 |
Identity: 54.74% |
Span: 570bp (29.9%) |
Frame: 3 |
| gi|19115857|ref|NP_594945.1| splicing factor u2af 35 kd subunit [Schizosaccharomyces pombe] gi|6136086|sp|Q09176|U2AG... |
| Match: gi|2130488|pir||JC6068 |
score: 201.4 |
e-value: 4.8e-50 |
Identity: 55.93% |
Span: 531bp (27.8%) |
Frame: 3 |
| gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast (Schizosaccharomyces pombe) |
| Match: gi|49138557|ref|XP_413499.1| |
score: 199.1 |
e-value: 2.4e-49 |
Identity: 55.98% |
Span: 552bp (28.9%) |
Frame: 3 |
| gi|49138557|ref|XP_413499.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] >gi|40747273|gb|EAA66429.1... |
| Match: gi|38099371|gb|EAA46727.1| |
score: 198.7 |
e-value: 3.1e-49 |
Identity: 55.79% |
Span: 570bp (29.9%) |
Frame: 3 |
| gi|38099371|gb|EAA46727.1| hypothetical protein MG09948.4 [Magnaporthe grisea 70-15] |
| Match: gi|17544466|ref|NP_503036.1| |
score: 198 |
e-value: 5.3e-49 |
Identity: 50% |
Span: 579bp (30.4%) |
Frame: 3 |
| gi|17544466|ref|NP_503036.1| auxiliary factor (30.9 kD) (4S62) [Caenorhabditis elegans] gi|7509376|pir||T31503 hypoth... |
| Match: gi|39585212|emb|CAE57455.1| |
score: 198 |
e-value: 5.3e-49 |
Identity: 50% |
Span: 579bp (30.4%) |
Frame: 3 |
| gi|39585212|emb|CAE57455.1| Hypothetical protein CBG00419 [Caenorhabditis briggsae] |
| Match: gi|46124965|ref|XP_387036.1| |
score: 197.2 |
e-value: 9e-49 |
Identity: 56.52% |
Span: 552bp (28.9%) |
Frame: 3 |
| gi|46124965|ref|XP_387036.1| conserved hypothetical protein [Gibberella zeae PH-1] >gi|42553126|gb|EAA75969.1| conser... |
| Match: gi|32420507|ref|XP_330697.1| |
score: 194.9 |
e-value: 4.5e-48 |
Identity: 54.89% |
Span: 552bp (28.9%) |
Frame: 3 |
| gi|32420507|ref|XP_330697.1| hypothetical protein [Neurospora crassa] gi|28926195|gb|EAA35178.1| hypothetical protein... |
| Match: gi|49074800|ref|XP_401508.1| |
score: 192.2 |
e-value: 2.9e-47 |
Identity: 46.76% |
Span: 648bp (34.0%) |
Frame: 3 |
| gi|49074800|ref|XP_401508.1| hypothetical protein UM03893.1 [Ustilago maydis 521] >gi|46099833|gb|EAK85066.1| hypothe... |
| Match: gi|33341702|gb|AAQ15222.1| |
score: 149.8 |
e-value: 1.7e-34 |
Identity: 50.34% |
Span: 432bp (22.7%) |
Frame: 3 |
| gi|33341702|gb|AAQ15222.1| FP793 [Homo sapiens] |
| Match: gi|31455228|gb|AAH05915.1| |
score: 146.7 |
e-value: 1.4e-33 |
Identity: 49.66% |
Span: 432bp (22.7%) |
Frame: 3 |
| gi|31455228|gb|AAH05915.1| U2AF1 protein [Homo sapiens] |
| Match: gi|33086652|gb|AAP92638.1| |
score: 146.7 |
e-value: 1.4e-33 |
Identity: 46.67% |
Span: 492bp (25.8%) |
Frame: 3 |
| gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus] |
| Match: gi|32189716|ref|NP_859446.1| |
score: 129.4 |
e-value: 2.3e-28 |
Identity: 38.69% |
Span: 501bp (26.3%) |
Frame: 3 |
| gi|32189716|ref|NP_859446.1| U2AF23/25 spliceosome component, putative [Leishmania major] gi|21629310|gb|AAM68987.1| ... |
| Match: gi|30046580|gb|AAH50451.1| |
score: 123.2 |
e-value: 1.7e-26 |
Identity: 39.02% |
Span: 573bp (30.0%) |
Frame: 3 |
| gi|30046580|gb|AAH50451.1| U2AF1L2 protein [Homo sapiens] |
| Match: gi|4827046|ref|NP_005080.1| |
score: 123.2 |
e-value: 1.7e-26 |
Identity: 39.02% |
Span: 573bp (30.0%) |
Frame: 3 |
| gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor, small subunit-related protein 2; U2A... |
| Match: gi|21450691|ref|NP_659424.1| |
score: 122.9 |
e-value: 2.2e-26 |
Identity: 42.21% |
Span: 462bp (24.2%) |
Frame: 3 |
| gi|21450691|ref|NP_659424.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 3; U2 small nuclear ribonucleoprotein... |
| Match: gi|10835077|ref|NP_005074.1| |
score: 122.9 |
e-value: 2.2e-26 |
Identity: 39.02% |
Span: 573bp (30.0%) |
Frame: 3 |
| gi|10835077|ref|NP_005074.1| U2(RNU2) small nuclear RNA auxiliary factor binding protein-like; U2 small nuclear ribon... |
| Match: gi|1125020|dbj|BAA08532.1| |
score: 122.9 |
e-value: 2.2e-26 |
Identity: 39.02% |
Span: 573bp (30.0%) |
Frame: 3 |
| gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens] |
| Match: gi|15218489|ref|NP_172503.1| |
score: 122.9 |
e-value: 2.2e-26 |
Identity: 39.52% |
Span: 492bp (25.8%) |
Frame: 3 |
| U2 snRNP auxiliary factor-related [Arabidopsis thaliana] >gi229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finge... |
| Match: gi|21616732|gb|AAM66350.1| |
score: 121.3 |
e-value: 6.3e-26 |
Identity: 33% |
Span: 585bp (30.7%) |
Frame: 3 |
| gi|21616732|gb|AAM66350.1| U2 splicing auxiliary factor; U2AF26 [Trypanosoma cruzi] |
| Match: gi|6678475|ref|NP_033479.1| |
score: 121.3 |
e-value: 6.3e-26 |
Identity: 41.57% |
Span: 486bp (25.5%) |
Frame: 3 |
| gi|6678475|ref|NP_033479.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2; U2 smal... |
| Match: gi|4741995|gb|AAD28792.1| |
score: 113.6 |
e-value: 1.3e-23 |
Identity: 31.36% |
Span: 696bp (36.5%) |
Frame: 3 |
| gi|4741995|gb|AAD28792.1| U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein [Takifugu rubri... |
| Match: gi|546061|gb|AAB30301.1| |
score: 109.8 |
e-value: 1.9e-22 |
Identity: 38.55% |
Span: 486bp (25.5%) |
Frame: 3 |
| gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus] |
| Match: gi|6755917|ref|NP_035793.1| |
score: 109.8 |
e-value: 1.9e-22 |
Identity: 38.55% |
Span: 486bp (25.5%) |
Frame: 3 |
| gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 1; U2 smal... |
| Match: gi|26326547|dbj|BAC27017.1| |
score: 109.8 |
e-value: 1.9e-22 |
Identity: 38.55% |
Span: 486bp (25.5%) |
Frame: 3 |
| gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus] |
| Match: gi|42572579|ref|NP_974385.1| |
score: 105.1 |
e-value: 4.7e-21 |
Identity: 68.92% |
Span: 219bp (11.5%) |
Frame: 3 |
| gi|42572579|ref|NP_974385.1| U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative [A... |
| Match: gi|47230617|emb|CAF99810.1| |
score: 102.4 |
e-value: 3e-20 |
Identity: 30.45% |
Span: 558bp (29.3%) |
Frame: 3 |
| gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|2833358|sp|Q29350|U2AG_PIG |
score: 100.9 |
e-value: 8.8e-20 |
Identity: 59.74% |
Span: 231bp (12.1%) |
Frame: 3 |
| gi|2833358|sp|Q29350|U2AG_PIG Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor 35 kDa subunit) (U2 snRNP auxi... |
| Match: gi|34880076|ref|XP_217612.2| |
score: 100.1 |
e-value: 1.5e-19 |
Identity: 40.82% |
Span: 429bp (22.5%) |
Frame: 3 |
| gi|34880076|ref|XP_217612.2| similar to U2af1-rs2 [Rattus norvegicus] |
| Match: gi|48094536|ref|XP_392139.1| |
score: 97.44 |
e-value: 9.7e-19 |
Identity: 30.6% |
Span: 675bp (35.4%) |
Frame: 3 |
| gi|48094536|ref|XP_392139.1| similar to U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit related-pr... |
| Match: gi|19173263|ref|NP_597066.1| |
score: 97.44 |
e-value: 9.7e-19 |
Identity: 33.71% |
Span: 522bp (27.4%) |
Frame: 3 |
| gi|19173263|ref|NP_597066.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF) [Encephalitozoon cuniculi... |
| Match: gi|48141934|ref|XP_397281.1| |
score: 95.52 |
e-value: 3.7e-18 |
Identity: 66.67% |
Span: 189bp (9.9%) |
Frame: 3 |
| gi|48141934|ref|XP_397281.1| similar to ENSANGP00000011066 [Apis mellifera] |
| Match: gi|45187517|ref|NP_983740.1| |
score: 95.13 |
e-value: 4.8e-18 |
Identity: 38.74% |
Span: 333bp (17.5%) |
Frame: 3 |
| gi|45187517|ref|NP_983740.1| ADL355Wp [Eremothecium gossypii] >gi|44982255|gb|AAS51564.1| ADL355Wp [Eremothecium goss... |
| Match: gi|4914334|gb|AAD32882.1| |
score: 92.43 |
e-value: 3.1e-17 |
Identity: 29.58% |
Span: 483bp (25.3%) |
Frame: 3 |
| gi|4914334|gb|AAD32882.1| F14N23.20 [Arabidopsis thaliana] |
| Match: gi|42659754|ref|XP_377230.1| |
score: 92.43 |
e-value: 3.1e-17 |
Identity: 37.32% |
Span: 366bp (19.2%) |
Frame: 3 |
| gi|42659754|ref|XP_377230.1| similar to U2af1 protein [Homo sapiens] |
| Match: gi|46431969|gb|EAK91483.1| |
score: 87.43 |
e-value: 1e-15 |
Identity: 30.99% |
Span: 420bp (22.0%) |
Frame: 3 |
| gi|46431969|gb|EAK91483.1| hypothetical protein CaO19.4062 [Candida albicans SC5314] >gi|46431979|gb|EAK91492.1| hypo... |
| Match: gi|31236194|ref|XP_319372.1| |
score: 86.27 |
e-value: 2.2e-15 |
Identity: 29.14% |
Span: 513bp (26.9%) |
Frame: 3 |
| gi|31236194|ref|XP_319372.1| ENSANGP00000012185 [Anopheles gambiae] gi|21301640|gb|EAA13785.1| ENSANGP00000012185 [An... |
| Match: gi|45382821|ref|NP_989986.1| |
score: 85.89 |
e-value: 2.9e-15 |
Identity: 79.17% |
Span: 144bp (7.6%) |
Frame: 3 |
| gi|45382821|ref|NP_989986.1| U2snRNP auxiliary factor small subunit (truncated) [Gallus gallus] >gi|13235102|emb|CAC3... |
| Match: gi|15988329|pdb|1JMT|A |
score: 80.11 |
e-value: 1.6e-13 |
Identity: 41.35% |
Span: 309bp (16.2%) |
Frame: 3 |
| gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER |
| Match: gi|46432105|gb|EAK91608.1| |
score: 78.95 |
e-value: 3.6e-13 |
Identity: 29.8% |
Span: 453bp (23.8%) |
Frame: 3 |
| gi|46432105|gb|EAK91608.1| hypothetical protein CaO19.7714 [Candida albicans SC5314] >gi|46432119|gb|EAK91621.1| hypo... |
| Match: gi|20129227|ref|NP_608857.1| |
score: 74.33 |
e-value: 8.8e-12 |
Identity: 23.81% |
Span: 750bp (39.3%) |
Frame: 3 |
| gi|20129227|ref|NP_608857.1| CG3294-PA [Drosophila melanogaster] gi|10727326|gb|AAF50982.2| CG3294-PA [Drosophila mel... |
| Match: gi|21483354|gb|AAM52652.1| |
score: 65.47 |
e-value: 4.1e-09 |
Identity: 27.39% |
Span: 453bp (23.8%) |
Frame: 3 |
| gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster] |
| Match: gi|28574034|ref|NP_787976.1| |
score: 65.47 |
e-value: 4.1e-09 |
Identity: 27.39% |
Span: 453bp (23.8%) |
Frame: 3 |
| gi|28574034|ref|NP_787976.1| CG3294-PB [Drosophila melanogaster] gi|28380246|gb|AAO41150.1| CG3294-PB [Drosophila mel... |
| Match: gi|46432105|gb|EAK91608.1| |
score: 60.08 |
e-value: 1.7e-07 |
Identity: 55.81% |
Span: 129bp (6.8%) |
Frame: 3 |
| gi|46432105|gb|EAK91608.1| hypothetical protein CaO19.7714 [Candida albicans SC5314] >gi|46432119|gb|EAK91621.1| hypo... |
| Match: gi|46431969|gb|EAK91483.1| |
score: 59.31 |
e-value: 2.9e-07 |
Identity: 57.14% |
Span: 126bp (6.6%) |
Frame: 3 |
| gi|46431969|gb|EAK91483.1| hypothetical protein CaO19.4062 [Candida albicans SC5314] >gi|46431979|gb|EAK91492.1| hypo... |
| Match: gi|32566584|ref|NP_872262.1| |
score: 55.84 |
e-value: 3.2e-06 |
Identity: 42.59% |
Span: 162bp (8.5%) |
Frame: 3 |
| gi|32566584|ref|NP_872262.1| predicted CDS, RNA-directed DNA polymerase family member (XA887) [Caenorhabditis elegans... |
| Match: gi|29250776|gb|EAA42265.1| |
score: 53.91 |
e-value: 1.2e-05 |
Identity: 25.62% |
Span: 465bp (24.4%) |
Frame: 3 |
| gi|29250776|gb|EAA42265.1| GLP_49_97129_97710 [Giardia lamblia ATCC 50803] |
| Match: gi|23956212|ref|NP_082518.1| |
score: 52.76 |
e-value: 2.8e-05 |
Identity: 30.18% |
Span: 492bp (25.8%) |
Frame: 3 |
| gi|23956212|ref|NP_082518.1| RIKEN cDNA 2600017A12 [Mus musculus] gi|22902415|gb|AAH37711.1| RIKEN cDNA 2600017A12 [M... |
| Match: gi|12847222|dbj|BAB27483.1| |
score: 52.76 |
e-value: 2.8e-05 |
Identity: 30.18% |
Span: 492bp (25.8%) |
Frame: 3 |
| gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus] |
| Match: gi|34881700|ref|XP_229199.2| |
score: 47.37 |
e-value: 0.001 |
Identity: 26.32% |
Span: 489bp (25.6%) |
Frame: 3 |
| gi|34881700|ref|XP_229199.2| similar to RIKEN cDNA 2600017A12 [Rattus norvegicus] |
| Match: gi|13278055|gb|AAH03883.1| |
score: 46.98 |
e-value: 0.002 |
Identity: 48.15% |
Span: 159bp (8.3%) |
Frame: 3 |
| gi|13278055|gb|AAH03883.1| Similar to RIKEN cDNA 2010107D16 gene [Mus musculus] |
| Match: gi|30584025|gb|AAP36261.1| |
score: 45.05 |
e-value: 0.006 |
Identity: 29.77% |
Span: 387bp (20.3%) |
Frame: 3 |
| gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct] |
| Match: gi|21361437|ref|NP_055315.2| |
score: 45.05 |
e-value: 0.006 |
Identity: 29.77% |
Span: 387bp (20.3%) |
Frame: 3 |
| gi|21361437|ref|NP_055315.2| HIV TAT specific factor 1; cofactor required for Tat activation of HIV-1 transcription [... |
|
| arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
| Match: At5g42820.1 |
score: 338.2 |
e-value: 8.3e-93 |
Identity: 72.84% |
Span: 702bp (36.8%) |
Frame: 3 |
| At5g42820.1 68412.m04707 splicing factor U2AF small subunit, putative U2 snRNP auxiliary factor, small subunit |
| Match: At5g42820.2 |
score: 338.2 |
e-value: 8.3e-93 |
Identity: 72.84% |
Span: 702bp (36.8%) |
Frame: 3 |
| At5g42820.2 68418.m05216 U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary fa... |
| Match: At1g27650.1 |
score: 330.9 |
e-value: 1.3e-90 |
Identity: 79.91% |
Span: 639bp (33.5%) |
Frame: 3 |
| At1g27650.1 68408.m03065 splicing factor U2AF small subunit, putative Strong similarity to gb|Y18349 U2 snRNP auxilia... |
| Match: At1g10320.1 |
score: 122.9 |
e-value: 5.5e-28 |
Identity: 39.52% |
Span: 492bp (25.8%) |
Frame: 3 |
| At1g10320.1 68408.m01049 splicing factor U2AF small subunit-related protein, putative similar to U2 small nuclear rib... |
| Match: At3g44785.1 |
score: 105.1 |
e-value: 1.2e-22 |
Identity: 68.92% |
Span: 219bp (11.5%) |
Frame: 3 |
| At3g44785.1 68416.m04822 U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative contai... |
| Match: At3g47120.1 |
score: 43.9 |
e-value: 0.00032 |
Identity: 24.08% |
Span: 447bp (23.4%) |
Frame: 3 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g27650.1 |
score: 40.82 |
e-value: 0.003 |
Identity: 77.27% |
Span: 66bp (3.5%) |
Frame: 3 |
| At1g27650.1 68408.m03065 splicing factor U2AF small subunit, putative Strong similarity to gb|Y18349 U2 snRNP auxilia... |
| Match: At5g42820.1 |
score: 40.05 |
e-value: 0.005 |
Identity: 73.91% |
Span: 69bp (3.6%) |
Frame: 3 |
| At5g42820.1 68412.m04707 splicing factor U2AF small subunit, putative U2 snRNP auxiliary factor, small subunit |
| Match: At5g42820.2 |
score: 40.05 |
e-value: 0.005 |
Identity: 73.91% |
Span: 69bp (3.6%) |
Frame: 3 |
| At5g42820.2 68418.m05216 U2 snRNP auxiliary factor small subunit, putative strong similarity to U2 snRNP auxiliary fa... |
|
