| arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
| Match: At1G09140.1 |
score: 229 |
e-value: 6e-60 |
Identity: 64.4% |
Span: 741bp (38.8%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At1G09140.2 |
score: 229 |
e-value: 6e-60 |
Identity: 64.4% |
Span: 741bp (38.8%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At1G02840.2 |
score: 220 |
e-value: 2e-57 |
Identity: 61% |
Span: 741bp (38.8%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At1G02840.3 |
score: 220 |
e-value: 2e-57 |
Identity: 61% |
Span: 741bp (38.8%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.1 |
score: 220 |
e-value: 2e-57 |
Identity: 61% |
Span: 741bp (38.8%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At3G49430.1 |
score: 212 |
e-value: 7e-55 |
Identity: 62.07% |
Span: 744bp (38.9%) |
Frame: 2 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
| Match: At4G02430.2 |
score: 211 |
e-value: 2e-54 |
Identity: 70.62% |
Span: 549bp (28.7%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At4G02430.1 |
score: 194 |
e-value: 1e-49 |
Identity: 73.41% |
Span: 486bp (25.4%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
| Match: At2G24590.1 |
score: 45.8 |
e-value: 9e-05 |
Identity: 51.11% |
Span: 135bp (7.1%) |
Frame: 2 |
| splicing factor, putative | chr2:10456916-10457939 FORWARD |
|
| 33 lower scoring hits censored -- only 9 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|52140005|gb|AAU29328.1| |
score: 229 |
e-value: 3e-58 |
Identity: 66% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays] |
| Match: gi|52140006|gb|AAU29329.1| |
score: 229 |
e-value: 4e-58 |
Identity: 75.81% |
Span: 549bp (28.7%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] |
| Match: gi|42561847|ref|NP_172386.3| |
score: 229 |
e-value: 5e-58 |
Identity: 64.4% |
Span: 741bp (38.8%) |
Frame: 2 |
| SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775270|emb|CAB42557.1| SF2/ASF-like splicing modul... |
| Match: gi|79582138|ref|NP_683288.2| |
score: 229 |
e-value: 5e-58 |
Identity: 64.4% |
Span: 741bp (38.8%) |
Frame: 2 |
| SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775271|emb|CAB42558.1| SF2/ASF-like splicing modul... |
| Match: gi|50939903|ref|XP_479479.1| |
score: 228 |
e-value: 8e-58 |
Identity: 63.35% |
Span: 753bp (39.4%) |
Frame: 2 |
| gi|50939903|ref|XP_479479.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] >gi|33146... |
| Match: gi|68037673|gb|AAY84884.1| |
score: 227 |
e-value: 2e-57 |
Identity: 76.92% |
Span: 546bp (28.6%) |
Frame: 2 |
| alternative splicing regulator [Triticum aestivum] |
| Match: gi|108708090|gb|ABF95885.1| |
score: 226 |
e-value: 2e-57 |
Identity: 75.14% |
Span: 549bp (28.7%) |
Frame: 2 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|52140010|gb|AAU29332.1| |
score: 226 |
e-value: 2e-57 |
Identity: 79.35% |
Span: 549bp (28.7%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays] |
| Match: gi|52140009|gb|AAU29331.1| |
score: 226 |
e-value: 2e-57 |
Identity: 79.35% |
Span: 549bp (28.7%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays] |
| Match: gi|108708089|gb|ABF95884.1| |
score: 226 |
e-value: 2e-57 |
Identity: 75.14% |
Span: 549bp (28.7%) |
Frame: 2 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi215692748|dbj|BAG88168.... |
| Match: gi|55792397|gb|AAV65309.1| |
score: 226 |
e-value: 4e-57 |
Identity: 76.92% |
Span: 546bp (28.6%) |
Frame: 2 |
| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|3249109|gb|AAC24092.1| |
score: 225 |
e-value: 5e-57 |
Identity: 75.96% |
Span: 549bp (28.7%) |
Frame: 2 |
| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit gbM72709 from Homo sapiens. ESTs gb|T42588 and gb... |
| Match: gi|52140012|gb|AAU29333.1| |
score: 224 |
e-value: 1e-56 |
Identity: 78.77% |
Span: 537bp (28.1%) |
Frame: 2 |
| gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays] |
| Match: gi|52140013|gb|AAU29334.1| |
score: 224 |
e-value: 1e-56 |
Identity: 78.77% |
Span: 537bp (28.1%) |
Frame: 2 |
| gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays] |
| Match: gi|52140015|gb|AAU29336.1| |
score: 224 |
e-value: 1e-56 |
Identity: 78.77% |
Span: 537bp (28.1%) |
Frame: 2 |
| gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays] |
| Match: gi|2443473|gb|AAB71386.1| |
score: 220 |
e-value: 2e-55 |
Identity: 61% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|30678395|ref|NP_850934.1| |
score: 220 |
e-value: 2e-55 |
Identity: 61% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|30678398|ref|NP_563665.3| |
score: 220 |
e-value: 2e-55 |
Identity: 61% |
Span: 741bp (38.8%) |
Frame: 2 |
| SR1; |
| Match: gi|5815235|gb|AAD52609.1| |
score: 219 |
e-value: 5e-55 |
Identity: 60.08% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thaliana] |
| Match: gi|5815237|gb|AAD52611.1| |
score: 219 |
e-value: 5e-55 |
Identity: 60.08% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
| Match: gi|5815239|gb|AAD52613.1| |
score: 219 |
e-value: 5e-55 |
Identity: 60.08% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
| Match: gi|5815236|gb|AAD52610.1| |
score: 219 |
e-value: 5e-55 |
Identity: 60.08% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
| Match: gi|5815238|gb|AAD52612.1| |
score: 218 |
e-value: 1e-54 |
Identity: 69.54% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana] |
| Match: gi|52140014|gb|AAU29335.1| |
score: 217 |
e-value: 2e-54 |
Identity: 75.4% |
Span: 537bp (28.1%) |
Frame: 2 |
| gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays] |
| Match: gi|92871675|gb|ABE80613.1| |
score: 215 |
e-value: 5e-54 |
Identity: 53.88% |
Span: 672bp (35.1%) |
Frame: 2 |
| RNA-binding |
| Match: gi|42565781|ref|NP_190512.3| |
score: 212 |
e-value: 6e-53 |
Identity: 62.07% |
Span: 744bp (38.9%) |
Frame: 2 |
| SRp34a (Ser/Arg-rich protein 34a); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi... |
| Match: gi|12324445|gb|AAG52185.1| |
score: 212 |
e-value: 6e-53 |
Identity: 62.07% |
Span: 744bp (38.9%) |
Frame: 2 |
| gi|12324445|gb|AAG52185.1| putative splicing factor; 53460-55514 [Arabidopsis thaliana] |
| Match: gi|30679143|ref|NP_567235.3| |
score: 211 |
e-value: 1e-52 |
Identity: 70.62% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|166844|gb|AAA32856.1| |
score: 210 |
e-value: 2e-52 |
Identity: 59.46% |
Span: 741bp (38.8%) |
Frame: 2 |
| gi|166844|gb|AAA32856.1| ribonucleoprotein >gi|1582992|prf||2119375A Ser/Arg-rich protein |
| Match: gi|34894608|ref|NP_908629.1| |
score: 209 |
e-value: 3e-52 |
Identity: 77.78% |
Span: 537bp (28.1%) |
Frame: 2 |
| gi|34894608|ref|NP_908629.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] gi|201614... |
| Match: gi|76573323|gb|ABA46766.1| |
score: 203 |
e-value: 2e-50 |
Identity: 67.02% |
Span: 549bp (28.7%) |
Frame: 2 |
| pre-mRNA splicing factor-like protein [Solanum tuberosum] |
| Match: gi|68035998|gb|AAY84875.1| |
score: 202 |
e-value: 6e-50 |
Identity: 71.58% |
Span: 549bp (28.7%) |
Frame: 2 |
| alternative |
| Match: gi|30679138|ref|NP_849537.1| |
score: 194 |
e-value: 1e-47 |
Identity: 73.41% |
Span: 486bp (25.4%) |
Frame: 2 |
| gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
| Match: gi|7269003|emb|CAB80736.1| |
score: 191 |
e-value: 8e-47 |
Identity: 70.22% |
Span: 501bp (26.2%) |
Frame: 2 |
| gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana] >gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana] |
| Match: gi|6561944|emb|CAB62448.1| |
score: 181 |
e-value: 1e-43 |
Identity: 65.54% |
Span: 492bp (25.7%) |
Frame: 2 |
| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana] |
| Match: gi|51854465|gb|AAU10844.1| |
score: 170 |
e-value: 3e-40 |
Identity: 80.42% |
Span: 429bp (22.4%) |
Frame: 2 |
| gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|52140007|gb|AAU29330.1| |
score: 168 |
e-value: 7e-40 |
Identity: 73.29% |
Span: 429bp (22.4%) |
Frame: 2 |
| gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays] |
| Match: gi|54291866|gb|AAV32234.1| |
score: 163 |
e-value: 2e-38 |
Identity: 82.96% |
Span: 405bp (21.2%) |
Frame: 2 |
| gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|66548276|ref|XP_393525.2| |
score: 145 |
e-value: 9e-33 |
Identity: 53.37% |
Span: 540bp (28.2%) |
Frame: 2 |
| gi|66548276|ref|XP_393525.2| PREDICTED: similar to GA20008-PA [Apis mellifera] |
| Match: gi|91085405|ref|XP_967263.1| |
score: 144 |
e-value: 2e-32 |
Identity: 56.5% |
Span: 522bp (27.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|55240068|gb|EAA09889.2| |
score: 143 |
e-value: 3e-32 |
Identity: 48.6% |
Span: 615bp (32.2%) |
Frame: 2 |
| gi|55240068|gb|EAA09889.2| ENSANGP00000020592 [Anopheles gambiae str. PEST] >gi|58386082|ref|XP_314469.2| ENSANGP0000... |
| Match: gi|55240069|gb|EAL40334.1| |
score: 143 |
e-value: 3e-32 |
Identity: 48.6% |
Span: 615bp (32.2%) |
Frame: 2 |
| gi|55240069|gb|EAL40334.1| ENSANGP00000027996 [Anopheles gambiae str. PEST] >gi|57923042|ref|XP_558031.1| ENSANGP0000... |
| Match: gi|53127294|emb|CAG31030.1| |
score: 142 |
e-value: 4e-32 |
Identity: 55.61% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|53127294|emb|CAG31030.1| hypothetical protein [Gallus gallus] |
| Match: gi|44890669|gb|AAH66682.1| |
score: 142 |
e-value: 4e-32 |
Identity: 56.15% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) [Da... |
| Match: gi|47227796|emb|CAG08959.1| |
score: 141 |
e-value: 1e-31 |
Identity: 55.68% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|108877724|gb|EAT41949.1| |
score: 141 |
e-value: 1e-31 |
Identity: 52.11% |
Span: 540bp (28.2%) |
Frame: 2 |
| arginine/serine-rich |
| Match: gi|21954085|gb|AAK93589.2| |
score: 140 |
e-value: 3e-31 |
Identity: 54.89% |
Span: 543bp (28.4%) |
Frame: 2 |
| gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis thaliana] |
| Match: gi|11527011|gb|AAG36874.1| |
score: 140 |
e-value: 2e-31 |
Identity: 49.48% |
Span: 540bp (28.2%) |
Frame: 2 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 140 |
e-value: 2e-31 |
Identity: 49.48% |
Span: 540bp (28.2%) |
Frame: 2 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|21358097|ref|NP_652611.1| |
score: 139 |
e-value: 4e-31 |
Identity: 53.3% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|21358097|ref|NP_652611.1| CG6987-PA [Drosophila melanogaster] gi|7243684|gb|AAF43413.1| SR family splicing factor ... |
| Match: gi|34785174|gb|AAH56752.1| |
score: 139 |
e-value: 6e-31 |
Identity: 56.5% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|34785174|gb|AAH56752.1| Unknown (protein for MGC:65898) [Danio rerio] |
| Match: gi|63101956|gb|AAH95586.1| |
score: 139 |
e-value: 4e-31 |
Identity: 55.61% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio] |
| Match: gi|73966552|ref|XP_866810.1| |
score: 138 |
e-value: 1e-30 |
Identity: 52.72% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|73966552|ref|XP_866810.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) isoform 8 [Canis... |
| Match: gi|33416587|gb|AAH55511.1| |
score: 138 |
e-value: 8e-31 |
Identity: 52.02% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|33416587|gb|AAH55511.1| Unknown (protein for MGC:66146) [Danio rerio] |
| Match: gi|54639204|gb|EAL28606.1| |
score: 138 |
e-value: 8e-31 |
Identity: 52.75% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|54639204|gb|EAL28606.1| GA20008-PA [Drosophila pseudoobscura] |
| Match: gi|109114623|ref|XP_001103473.1| |
score: 137 |
e-value: 1e-30 |
Identity: 54.55% |
Span: 549bp (28.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|5902076|ref|NP_008855.1| |
score: 137 |
e-value: 1e-30 |
Identity: 54.55% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|5902076|ref|NP_008855.1| splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) [H... |
| Match: gi|56758822|gb|AAW27551.1| |
score: 137 |
e-value: 1e-30 |
Identity: 51.81% |
Span: 543bp (28.4%) |
Frame: 2 |
| gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum] |
| Match: gi|60811245|gb|AAX36166.1| |
score: 137 |
e-value: 1e-30 |
Identity: 54.55% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct] |
| Match: gi|76642711|ref|XP_872793.1| |
score: 137 |
e-value: 1e-30 |
Identity: 54.55% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|76642711|ref|XP_872793.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) [Bos taurus] >gi... |
| Match: gi|55731147|emb|CAH92288.1| |
score: 137 |
e-value: 1e-30 |
Identity: 54.55% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo pygmaeus] >gi|68724975|sp|Q5R7H2|SFRS1_PONPY Splicing factor,... |
| Match: gi|27503247|gb|AAH42354.1| |
score: 136 |
e-value: 3e-30 |
Identity: 50.74% |
Span: 549bp (28.7%) |
Frame: 2 |
| gi|27503247|gb|AAH42354.1| Similar to splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing ... |
| Match: gi|55742372|ref|NP_001006919.1| |
score: 135 |
e-value: 9e-30 |
Identity: 50% |
Span: 549bp (28.7%) |
Frame: 2 |
| splicing |
| Match: gi|73966554|ref|XP_853057.1| |
score: 134 |
e-value: 2e-29 |
Identity: 54.8% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|73966554|ref|XP_853057.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (ASF/SF2) isoform 1 [Canis... |
| Match: gi|26347437|dbj|BAC37367.1| |
score: 134 |
e-value: 2e-29 |
Identity: 54.8% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus] |
| Match: gi|179074|gb|AAA35564.1| |
score: 134 |
e-value: 2e-29 |
Identity: 54.8% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|179074|gb|AAA35564.1| alternative |
| Match: gi|62088696|dbj|BAD92795.1| |
score: 134 |
e-value: 1e-29 |
Identity: 52.36% |
Span: 564bp (29.5%) |
Frame: 2 |
| gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) va... |
| Match: gi|45708738|gb|AAH33785.1| |
score: 134 |
e-value: 1e-29 |
Identity: 52.36% |
Span: 564bp (29.5%) |
Frame: 2 |
| gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens] |
| Match: gi|26383576|dbj|BAC25546.1| |
score: 133 |
e-value: 3e-29 |
Identity: 53.51% |
Span: 543bp (28.4%) |
Frame: 2 |
| gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus] |
| Match: gi|74192738|dbj|BAE34886.1| |
score: 129 |
e-value: 4e-28 |
Identity: 54.29% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus] |
| Match: gi|56388745|gb|AAH87684.1| |
score: 128 |
e-value: 1e-27 |
Identity: 54.29% |
Span: 522bp (27.3%) |
Frame: 2 |
| Splicing |
| Match: gi|15126569|gb|AAH12217.1| |
score: 128 |
e-value: 9e-28 |
Identity: 53.71% |
Span: 522bp (27.3%) |
Frame: 2 |
| Splicing |
| Match: gi|57105666|ref|XP_534706.1| |
score: 127 |
e-value: 1e-27 |
Identity: 53.14% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|57105666|ref|XP_534706.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 9 (Pre-mRNA splicing factor ... |
| Match: gi|76638495|ref|XP_586968.2| |
score: 127 |
e-value: 2e-27 |
Identity: 53.14% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|76638495|ref|XP_586968.2| PREDICTED: similar to splicing factor, arginine/serine rich 9 (predicted) isoform 1 [Bos... |
| Match: gi|4506903|ref|NP_003760.1| |
score: 125 |
e-value: 6e-27 |
Identity: 53.14% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|4506903|ref|NP_003760.1| splicing factor, arginine/serine-rich 9 [Homo sapiens] gi|3929377|sp|Q13242|SFR9_HUMAN Sp... |
| Match: gi|45501375|gb|AAH67134.1| |
score: 123 |
e-value: 4e-26 |
Identity: 49.15% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|45501375|gb|AAH67134.1| Hypothetical protein zgc:77449 [Danio rerio] >gi|47086241|ref|NP_998064.1| hypothetical pr... |
| Match: gi|52345494|ref|NP_001004795.1| |
score: 121 |
e-value: 1e-25 |
Identity: 51.98% |
Span: 522bp (27.3%) |
Frame: 2 |
| MGC69355 |
| Match: gi|39583259|emb|CAE60051.1| |
score: 120 |
e-value: 2e-25 |
Identity: 46.96% |
Span: 540bp (28.2%) |
Frame: 2 |
| gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caenorhabditis briggsae] |
| Match: gi|54261635|gb|AAH84289.1| |
score: 119 |
e-value: 4e-25 |
Identity: 53.07% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis] |
| Match: gi|39582979|emb|CAE73044.1| |
score: 114 |
e-value: 2e-23 |
Identity: 46.37% |
Span: 498bp (26.0%) |
Frame: 2 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|49037494|gb|AAT49042.1| |
score: 111 |
e-value: 1e-22 |
Identity: 42.63% |
Span: 543bp (28.4%) |
Frame: 2 |
| gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii] |
| Match: gi|73994724|ref|XP_863332.1| |
score: 108 |
e-value: 7e-22 |
Identity: 47.43% |
Span: 522bp (27.3%) |
Frame: 2 |
| gi|73994724|ref|XP_863332.1| PREDICTED: similar to splicing factor, arginine/serine rich 9 (predicted) isoform 2 [Can... |
| Match: gi|12860555|dbj|BAB31986.1| |
score: 102 |
e-value: 5e-20 |
Identity: 52.2% |
Span: 474bp (24.8%) |
Frame: 2 |
| gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus] |
| Match: gi|92895832|gb|ABE92856.1| |
score: 100 |
e-value: 2e-19 |
Identity: 79.66% |
Span: 177bp (9.3%) |
Frame: 2 |
| putative |
| Match: gi|65304906|emb|CAI73231.1| |
score: 98.6 |
e-value: 9e-19 |
Identity: 38.1% |
Span: 555bp (29.0%) |
Frame: 2 |
| gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata] |
| Match: gi|23495082|gb|AAN35414.1| |
score: 98.2 |
e-value: 1e-18 |
Identity: 43.72% |
Span: 537bp (28.1%) |
Frame: 2 |
| gi|23495082|gb|AAN35414.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7] >gi|23508020|ref|NP_700690.... |
| Match: gi|71033489|ref|XP_766386.1| |
score: 98.2 |
e-value: 1e-18 |
Identity: 38.62% |
Span: 555bp (29.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|65303981|emb|CAI76360.1| |
score: 96.7 |
e-value: 4e-18 |
Identity: 46.51% |
Span: 516bp (27.0%) |
Frame: 2 |
| gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata] |
| Match: gi|70945413|ref|XP_742529.1| |
score: 94.4 |
e-value: 2e-17 |
Identity: 41.11% |
Span: 528bp (27.6%) |
Frame: 2 |
| gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi] >gi|56521563|emb|CAH75989.1| pr... |
| Match: gi|82540657|ref|XP_724630.1| |
score: 94 |
e-value: 2e-17 |
Identity: 43.64% |
Span: 495bp (25.9%) |
Frame: 2 |
| splicing |
| Match: gi|71028610|ref|XP_763948.1| |
score: 94 |
e-value: 2e-17 |
Identity: 44.19% |
Span: 516bp (27.0%) |
Frame: 2 |
| splicing |
| Match: gi|83273559|ref|XP_729451.1| |
score: 93.6 |
e-value: 3e-17 |
Identity: 40.64% |
Span: 543bp (28.4%) |
Frame: 2 |
| splicing |
| Match: gi|72084547|ref|XP_788257.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 57.33% |
Span: 222bp (11.6%) |
Frame: 2 |
| gi|72084547|ref|XP_788257.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1 (splicing factor 2, altern... |
| Match: gi|92895831|gb|ABE92855.1| |
score: 89.7 |
e-value: 4e-16 |
Identity: 72.16% |
Span: 291bp (15.2%) |
Frame: 2 |
| RNA-binding |
| Match: gi|56966827|pdb|1WG4|A |
score: 88.6 |
e-value: 1e-15 |
Identity: 60% |
Span: 222bp (11.6%) |
Frame: 2 |
| gi|56966827|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986 |
| Match: gi|55639061|ref|XP_509428.1| |
score: 87 |
e-value: 3e-15 |
Identity: 58.67% |
Span: 222bp (11.6%) |
Frame: 2 |
| gi|55639061|ref|XP_509428.1| PREDICTED: similar to MGC4767 protein [Pan troglodytes] |
| Match: gi|109098955|ref|XP_001089031.1| |
score: 87 |
e-value: 3e-15 |
Identity: 58.67% |
Span: 222bp (11.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|74152317|dbj|BAE33925.1| |
score: 86.7 |
e-value: 4e-15 |
Identity: 43.29% |
Span: 477bp (24.9%) |
Frame: 2 |
| gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus] >gi|26449170|dbj|BAC36925.1| unnamed protein produ... |
| Match: gi|62898449|dbj|BAD97164.1| |
score: 86.7 |
e-value: 4e-15 |
Identity: 43.29% |
Span: 477bp (24.9%) |
Frame: 2 |
| gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens] |
| Match: gi|21361282|ref|NP_005617.2| |
score: 86.7 |
e-value: 4e-15 |
Identity: 43.29% |
Span: 477bp (24.9%) |
Frame: 2 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
|
| 153 lower scoring hits censored -- only 100 best hits are stored. |
