genbank/nr [blastx] | Showing best 100 hits recorded |
Match: gi|157358611|emb|CAO66287.1| |
score: 260 |
e-value: 4e-67 |
Identity: 58.22% |
Span: 630bp (29.6%) |
Frame: 3 |
unnamed |
Match: gi|22330665|ref|NP_565132.2| |
score: 255 |
e-value: 1e-65 |
Identity: 51.27% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
Match: gi|18394923|ref|NP_564127.1| |
score: 233 |
e-value: 5e-59 |
Identity: 48.21% |
Span: 762bp (35.8%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
Match: gi|23505939|gb|AAN28829.1| |
score: 233 |
e-value: 5e-59 |
Identity: 48.21% |
Span: 762bp (35.8%) |
Frame: 3 |
At1g20880/F9H16_14 [Arabidopsis thaliana] |
Match: gi|15010636|gb|AAK73977.1| |
score: 230 |
e-value: 4e-58 |
Identity: 47.86% |
Span: 762bp (35.8%) |
Frame: 3 |
At1g20880/F9H16_14 [Arabidopsis thaliana] |
Match: gi|115448273|ref|NP_001047916.1| |
score: 227 |
e-value: 4e-57 |
Identity: 46.1% |
Span: 759bp (35.7%) |
Frame: 3 |
Os02g0714000 [Oryza sativa (japonica cultivar-group)] >gi113537447|dbj|BAF09830.1| Os02g0714000 [Oryza sativa Japonic... |
Match: gi|195641226|gb|ACG40081.1| |
score: 218 |
e-value: 1e-54 |
Identity: 43.59% |
Span: 771bp (36.2%) |
Frame: 3 |
RNA-binding |
Match: gi|115469006|ref|NP_001058102.1| |
score: 216 |
e-value: 7e-54 |
Identity: 46.21% |
Span: 777bp (36.5%) |
Frame: 3 |
Os06g0622900 [Oryza sativa (japonica cultivar-group)] >gi51090851|dbj|BAD35379.1| putative SEB4D [Oryza sativa Japoni... |
Match: gi|218198571|gb|EEC80998.1| |
score: 215 |
e-value: 1e-53 |
Identity: 55.12% |
Span: 561bp (26.4%) |
Frame: 3 |
hypothetical protein OsI_23744 [Oryza sativa Indica Group] |
Match: gi|6554473|gb|AAF16655.1|AC012394_4 |
score: 199 |
e-value: 6e-49 |
Identity: 45.02% |
Span: 753bp (35.4%) |
Frame: 3 |
putative RNA-binding protein; 16955-18423 [Arabidopsis thaliana] >gi12323977|gb|AAG51948.1|AC015450_9 putative RNA-bi... |
Match: gi|125540879|gb|EAY87274.1| |
score: 194 |
e-value: 3e-47 |
Identity: 61.07% |
Span: 447bp (21.0%) |
Frame: 3 |
hypothetical protein OsI_08676 [Oryza sativa Indica Group] |
Match: gi|4836901|gb|AAD30604.1|AC007369_14 |
score: 191 |
e-value: 2e-46 |
Identity: 45.8% |
Span: 633bp (29.7%) |
Frame: 3 |
Unknown protein [Arabidopsis thaliana] |
Match: gi|125597898|gb|EAZ37678.1| |
score: 183 |
e-value: 5e-44 |
Identity: 52.33% |
Span: 561bp (26.4%) |
Frame: 3 |
hypothetical |
Match: gi|116787407|gb|ABK24496.1| |
score: 181 |
e-value: 2e-43 |
Identity: 43.86% |
Span: 774bp (36.4%) |
Frame: 3 |
unknown [Picea sitchensis] |
Match: gi|118482964|gb|ABK93394.1| |
score: 169 |
e-value: 9e-40 |
Identity: 45.5% |
Span: 627bp (29.5%) |
Frame: 3 |
unknown [Populus trichocarpa] |
Match: gi|115441383|ref|NP_001044971.1| |
score: 166 |
e-value: 8e-39 |
Identity: 55.77% |
Span: 450bp (21.1%) |
Frame: 3 |
Os01g0876800 [Oryza sativa (japonica cultivar-group)] >gi56784732|dbj|BAD81881.1| putative RRM-containing protein SEB... |
Match: gi|157352695|emb|CAO44510.1| |
score: 164 |
e-value: 3e-38 |
Identity: 52% |
Span: 513bp (24.1%) |
Frame: 3 |
unnamed |
Match: gi|147798190|emb|CAN73746.1| |
score: 164 |
e-value: 3e-38 |
Identity: 52% |
Span: 513bp (24.1%) |
Frame: 3 |
hypothetical protein [Vitis vinifera] |
Match: gi|147802334|emb|CAN65953.1| |
score: 163 |
e-value: 5e-38 |
Identity: 57.14% |
Span: 420bp (19.7%) |
Frame: 3 |
hypothetical protein [Vitis vinifera] |
Match: gi|8052542|gb|AAF71806.1|AC013430_15 |
score: 162 |
e-value: 1e-37 |
Identity: 40.56% |
Span: 717bp (33.7%) |
Frame: 3 |
F3F9.20 [Arabidopsis thaliana] |
Match: gi|125583445|gb|EAZ24376.1| |
score: 161 |
e-value: 2e-37 |
Identity: 51.83% |
Span: 405bp (19.0%) |
Frame: 3 |
hypothetical |
Match: gi|42571735|ref|NP_973958.1| |
score: 160 |
e-value: 6e-37 |
Identity: 42.86% |
Span: 624bp (29.3%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi14532532|gb|AAK63994.1| At1g33470/F10C21_14 ... |
Match: gi|18411885|ref|NP_565175.1| |
score: 160 |
e-value: 4e-37 |
Identity: 41.22% |
Span: 717bp (33.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21537200|gb|AAM61541.1| RNA recognition moti... |
Match: gi|42572157|ref|NP_974169.1| |
score: 160 |
e-value: 4e-37 |
Identity: 41.22% |
Span: 717bp (33.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi110736924|dbj|BAF00419.1| hypothetical prote... |
Match: gi|115442349|ref|NP_001045454.1| |
score: 157 |
e-value: 4e-36 |
Identity: 48.72% |
Span: 531bp (24.9%) |
Frame: 3 |
Os01g0958500 [Oryza sativa (japonica cultivar-group)] >gi57900099|dbj|BAD88161.1| RNA recognition motif (RRM)-contain... |
Match: gi|42562492|ref|NP_174613.2| |
score: 157 |
e-value: 3e-36 |
Identity: 42.44% |
Span: 624bp (29.3%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi51970938|dbj|BAD44161.1| unknown protein [Ar... |
Match: gi|186478756|ref|NP_564168.2| |
score: 155 |
e-value: 1e-35 |
Identity: 38.61% |
Span: 711bp (33.4%) |
Frame: 3 |
RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi9392682|gb|AAF87259.1|AC068562_6 Co... |
Match: gi|195605124|gb|ACG24392.1| |
score: 154 |
e-value: 3e-35 |
Identity: 36.64% |
Span: 741bp (34.8%) |
Frame: 3 |
RNA-binding |
Match: gi|51535080|dbj|BAD37669.1| |
score: 153 |
e-value: 7e-35 |
Identity: 41.26% |
Span: 762bp (35.8%) |
Frame: 3 |
putative |
Match: gi|219363281|ref|NP_001136575.1| |
score: 151 |
e-value: 3e-34 |
Identity: 42.79% |
Span: 648bp (30.4%) |
Frame: 3 |
hypothetical protein LOC100216697 [Zea mays] >gi194696232|gb|ACF82200.1| unknown [Zea mays] |
Match: gi|21593674|gb|AAM65641.1| |
score: 151 |
e-value: 3e-34 |
Identity: 54.29% |
Span: 414bp (19.4%) |
Frame: 3 |
unknown [Arabidopsis thaliana] >gi88900324|gb|ABD57474.1| At1g22330 [Arabidopsis thaliana] |
Match: gi|63003880|gb|AAY25469.1| |
score: 150 |
e-value: 4e-34 |
Identity: 36.46% |
Span: 702bp (33.0%) |
Frame: 3 |
gi|63003880|gb|AAY25469.1| At2g46780 [Arabidopsis thaliana] |
Match: gi|15226439|ref|NP_182201.1| |
score: 149 |
e-value: 8e-34 |
Identity: 49.11% |
Span: 477bp (22.4%) |
Frame: 3 |
gi|15226439|ref|NP_182201.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|7485761|pir||T0... |
Match: gi|218191605|gb|EEC74032.1| |
score: 149 |
e-value: 1e-33 |
Identity: 38.46% |
Span: 723bp (34.0%) |
Frame: 3 |
hypothetical |
Match: gi|157349172|emb|CAO24318.1| |
score: 147 |
e-value: 3e-33 |
Identity: 80.72% |
Span: 249bp (11.7%) |
Frame: 3 |
unnamed |
Match: gi|115452347|ref|NP_001049774.1| |
score: 147 |
e-value: 3e-33 |
Identity: 37.41% |
Span: 744bp (34.9%) |
Frame: 3 |
Os03g0286500 [Oryza sativa (japonica cultivar-group)] >gi108707565|gb|ABF95360.1| RNA recognition motif family protei... |
Match: gi|125573383|gb|EAZ14898.1| |
score: 147 |
e-value: 3e-33 |
Identity: 64.86% |
Span: 333bp (15.6%) |
Frame: 3 |
hypothetical protein OsJ_04828 [Oryza sativa Japonica Group] |
Match: gi|42571597|ref|NP_973889.1| |
score: 146 |
e-value: 8e-33 |
Identity: 50.32% |
Span: 447bp (21.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
Match: gi|18395177|ref|NP_564184.1| |
score: 146 |
e-value: 8e-33 |
Identity: 50.32% |
Span: 447bp (21.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi13605871|gb|AAK32921.1|AF367334_1 At1g22910/... |
Match: gi|42571595|ref|NP_973888.1| |
score: 146 |
e-value: 8e-33 |
Identity: 50.32% |
Span: 447bp (21.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
Match: gi|2462825|gb|AAB72160.1| |
score: 143 |
e-value: 7e-32 |
Identity: 47.85% |
Span: 447bp (21.0%) |
Frame: 3 |
unknown [Arabidopsis thaliana] |
Match: gi|108707149|gb|ABF94944.1| |
score: 142 |
e-value: 9e-32 |
Identity: 57.14% |
Span: 378bp (17.8%) |
Frame: 3 |
RNA-binding |
Match: gi|12322386|gb|AAG51218.1|AC051630_15 |
score: 142 |
e-value: 1e-31 |
Identity: 79.52% |
Span: 249bp (11.7%) |
Frame: 3 |
RNA-binding |
Match: gi|125583734|gb|EAZ24665.1| |
score: 141 |
e-value: 2e-31 |
Identity: 42.72% |
Span: 516bp (24.2%) |
Frame: 3 |
hypothetical |
Match: gi|157344079|emb|CAO69012.1| |
score: 141 |
e-value: 3e-31 |
Identity: 37.86% |
Span: 717bp (33.7%) |
Frame: 3 |
unnamed |
Match: gi|168018647|ref|XP_001761857.1| |
score: 140 |
e-value: 5e-31 |
Identity: 78.31% |
Span: 249bp (11.7%) |
Frame: 3 |
predicted protein [Physcomitrella patens subsp. patens] >gi162686912|gb|EDQ73298.1| predicted protein [Physcomitrella... |
Match: gi|47229392|emb|CAF99380.1| |
score: 140 |
e-value: 4e-31 |
Identity: 42.66% |
Span: 591bp (27.8%) |
Frame: 3 |
gi|47229392|emb|CAF99380.1| unnamed protein product [Tetraodon nigroviridis] |
Match: gi|21536939|gb|AAM61280.1| |
score: 139 |
e-value: 1e-30 |
Identity: 41.28% |
Span: 657bp (30.9%) |
Frame: 3 |
RNA binding protein-like [Arabidopsis thaliana] |
Match: gi|115448765|ref|NP_001048162.1| |
score: 138 |
e-value: 2e-30 |
Identity: 54.2% |
Span: 378bp (17.8%) |
Frame: 3 |
Os02g0755400 |
Match: gi|168035926|ref|XP_001770459.1| |
score: 138 |
e-value: 2e-30 |
Identity: 77.11% |
Span: 249bp (11.7%) |
Frame: 3 |
predicted protein [Physcomitrella patens subsp. patens] >gi162678167|gb|EDQ64628.1| predicted protein [Physcomitrella... |
Match: gi|47225499|emb|CAG11982.1| |
score: 138 |
e-value: 2e-30 |
Identity: 43.58% |
Span: 627bp (29.5%) |
Frame: 3 |
gi|47225499|emb|CAG11982.1| unnamed protein product [Tetraodon nigroviridis] |
Match: gi|15232579|ref|NP_191037.1| |
score: 137 |
e-value: 3e-30 |
Identity: 40.85% |
Span: 657bp (30.9%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi7258381|emb|CAB77597.1| RNA binding protein-... |
Match: gi|212274507|ref|NP_001130852.1| |
score: 136 |
e-value: 7e-30 |
Identity: 50.68% |
Span: 414bp (19.4%) |
Frame: 3 |
hypothetical protein LOC100191956 [Zea mays] >gi194690272|gb|ACF79220.1| unknown [Zea mays] >gi|195616000|gb|ACG29830... |
Match: gi|194697728|gb|ACF82948.1| |
score: 136 |
e-value: 7e-30 |
Identity: 50.68% |
Span: 414bp (19.4%) |
Frame: 3 |
unknown [Zea mays] |
Match: gi|118481097|gb|ABK92502.1| |
score: 134 |
e-value: 4e-29 |
Identity: 38.14% |
Span: 627bp (29.5%) |
Frame: 3 |
unknown |
Match: gi|27476063|gb|AAO16994.1| |
score: 132 |
e-value: 1e-28 |
Identity: 33.97% |
Span: 744bp (34.9%) |
Frame: 3 |
Hypothetical protein [Oryza sativa Japonica Group] >gi125585859|gb|EAZ26523.1| hypothetical protein OsJ_10418 [Oryza ... |
Match: gi|218192581|gb|EEC75008.1| |
score: 131 |
e-value: 2e-28 |
Identity: 36.2% |
Span: 657bp (30.9%) |
Frame: 3 |
hypothetical protein OsI_11079 [Oryza sativa Indica Group] |
Match: gi|45360685|ref|NP_989016.1| |
score: 130 |
e-value: 6e-28 |
Identity: 36.86% |
Span: 753bp (35.4%) |
Frame: 3 |
gi|45360685|ref|NP_989016.1| hypothetical protein MGC75808 [Xenopus tropicalis] >gi|38174185|gb|AAH61322.1| Hypotheti... |
Match: gi|47086303|ref|NP_998030.1| |
score: 130 |
e-value: 5e-28 |
Identity: 45.81% |
Span: 534bp (25.1%) |
Frame: 3 |
gi|47086303|ref|NP_998030.1| RNA binding protein [Danio rerio] >gi|45126691|dbj|BAD12194.1| RNA binding protein [Dani... |
Match: gi|407468|emb|CAA53065.1| |
score: 129 |
e-value: 8e-28 |
Identity: 42.58% |
Span: 576bp (27.1%) |
Frame: 3 |
SEB4 |
Match: gi|110740388|dbj|BAF02089.1| |
score: 129 |
e-value: 8e-28 |
Identity: 48.1% |
Span: 462bp (21.7%) |
Frame: 3 |
RNA binding protein - like [Arabidopsis thaliana] |
Match: gi|124021001|sp|Q5ZMA3|RBM24_CHICK |
score: 128 |
e-value: 2e-27 |
Identity: 36.58% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA-binding |
Match: gi|186522130|ref|NP_001119208.1| |
score: 127 |
e-value: 4e-27 |
Identity: 67.47% |
Span: 249bp (11.7%) |
Frame: 3 |
nucleic |
Match: gi|147906083|ref|NP_001079578.1| |
score: 127 |
e-value: 3e-27 |
Identity: 37.65% |
Span: 753bp (35.4%) |
Frame: 3 |
similar |
Match: gi|116830329|gb|ABK28122.1| |
score: 127 |
e-value: 4e-27 |
Identity: 67.47% |
Span: 249bp (11.7%) |
Frame: 3 |
unknown |
Match: gi|109504768|ref|XP_001073426.1| |
score: 127 |
e-value: 4e-27 |
Identity: 37.55% |
Span: 711bp (33.4%) |
Frame: 3 |
PREDICTED: |
Match: gi|134053933|ref|NP_062420.2| |
score: 127 |
e-value: 4e-27 |
Identity: 42.11% |
Span: 576bp (27.1%) |
Frame: 3 |
seb4 |
Match: gi|124487277|ref|NP_001074894.1| |
score: 127 |
e-value: 4e-27 |
Identity: 37.55% |
Span: 711bp (33.4%) |
Frame: 3 |
RNA |
Match: gi|147907395|ref|NP_001080995.1| |
score: 127 |
e-value: 3e-27 |
Identity: 37.25% |
Span: 753bp (35.4%) |
Frame: 3 |
RRM-containing |
Match: gi|194038046|ref|XP_001925482.1| |
score: 126 |
e-value: 9e-27 |
Identity: 37.14% |
Span: 711bp (33.4%) |
Frame: 3 |
PREDICTED: |
Match: gi|114053145|ref|NP_001040531.1| |
score: 126 |
e-value: 7e-27 |
Identity: 40.49% |
Span: 600bp (28.2%) |
Frame: 3 |
RNA |
Match: gi|126322255|ref|XP_001376382.1| |
score: 126 |
e-value: 9e-27 |
Identity: 37.3% |
Span: 711bp (33.4%) |
Frame: 3 |
PREDICTED: |
Match: gi|149030036|gb|EDL85128.1| |
score: 126 |
e-value: 7e-27 |
Identity: 42.11% |
Span: 576bp (27.1%) |
Frame: 3 |
RNA-binding |
Match: gi|209156202|gb|ACI34333.1| |
score: 125 |
e-value: 1e-26 |
Identity: 47.77% |
Span: 465bp (21.8%) |
Frame: 3 |
RNA-binding |
Match: gi|34577107|ref|NP_059965.2| |
score: 125 |
e-value: 2e-26 |
Identity: 40.78% |
Span: 576bp (27.1%) |
Frame: 3 |
gi|34577107|ref|NP_059965.2| RNA-binding region containing protein 1 isoform a; ssDNA binding protein SEB4; CLL-assoc... |
Match: gi|157279879|ref|NP_001098455.1| |
score: 125 |
e-value: 2e-26 |
Identity: 37.14% |
Span: 711bp (33.4%) |
Frame: 3 |
RNA |
Match: gi|61098037|ref|NP_001012881.1| |
score: 125 |
e-value: 2e-26 |
Identity: 47.1% |
Span: 465bp (21.8%) |
Frame: 3 |
RNA |
Match: gi|19851930|gb|AAL99924.1|AF432218_1 |
score: 125 |
e-value: 2e-26 |
Identity: 40.78% |
Span: 576bp (27.1%) |
Frame: 3 |
CLL-associated |
Match: gi|149632517|ref|XP_001508012.1| |
score: 125 |
e-value: 2e-26 |
Identity: 47.1% |
Span: 465bp (21.8%) |
Frame: 3 |
PREDICTED: |
Match: gi|45239008|gb|AAS55633.1| |
score: 125 |
e-value: 1e-26 |
Identity: 37.14% |
Span: 711bp (33.4%) |
Frame: 3 |
gi|45239008|gb|AAS55633.1| unknown [Homo sapiens] |
Match: gi|114605905|ref|XP_001175216.1| |
score: 125 |
e-value: 2e-26 |
Identity: 37.14% |
Span: 711bp (33.4%) |
Frame: 3 |
PREDICTED: |
Match: gi|74761312|sp|Q9BX46|RBM24_HUMAN |
score: 125 |
e-value: 2e-26 |
Identity: 37.14% |
Span: 711bp (33.4%) |
Frame: 3 |
RNA-binding |
Match: gi|109091496|ref|XP_001087417.1| |
score: 124 |
e-value: 3e-26 |
Identity: 37.6% |
Span: 723bp (34.0%) |
Frame: 3 |
PREDICTED: |
Match: gi|157427752|ref|NP_001098782.1| |
score: 124 |
e-value: 4e-26 |
Identity: 42.11% |
Span: 576bp (27.1%) |
Frame: 3 |
RNA |
Match: gi|149639860|ref|XP_001510485.1| |
score: 124 |
e-value: 4e-26 |
Identity: 43.75% |
Span: 525bp (24.7%) |
Frame: 3 |
PREDICTED: |
Match: gi|66517026|ref|XP_623982.1| |
score: 124 |
e-value: 4e-26 |
Identity: 47.95% |
Span: 438bp (20.6%) |
Frame: 3 |
gi|66517026|ref|XP_623982.1| PREDICTED: similar to ENSANGP00000015329 [Apis mellifera] |
Match: gi|8895698|gb|AAF81070.1|AF223427_1 |
score: 123 |
e-value: 6e-26 |
Identity: 36.72% |
Span: 753bp (35.4%) |
Frame: 3 |
RRM-containing |
Match: gi|126302793|ref|XP_001368885.1| |
score: 123 |
e-value: 8e-26 |
Identity: 36.7% |
Span: 747bp (35.1%) |
Frame: 3 |
PREDICTED: |
Match: gi|21754197|dbj|BAC04474.1| |
score: 123 |
e-value: 8e-26 |
Identity: 46.45% |
Span: 465bp (21.8%) |
Frame: 3 |
gi|21754197|dbj|BAC04474.1| unnamed protein product [Homo sapiens] |
Match: gi|148233159|ref|NP_001082613.1| |
score: 122 |
e-value: 1e-25 |
Identity: 41.5% |
Span: 591bp (27.8%) |
Frame: 3 |
RRM-type |
Match: gi|51859091|gb|AAH81649.1| |
score: 122 |
e-value: 1e-25 |
Identity: 39.19% |
Span: 573bp (26.9%) |
Frame: 3 |
gi|51859091|gb|AAH81649.1| Rnpc1 protein [Danio rerio] |
Match: gi|407421|emb|CAA53064.1| |
score: 122 |
e-value: 1e-25 |
Identity: 48.95% |
Span: 429bp (20.2%) |
Frame: 3 |
gi|407421|emb|CAA53064.1| SEB4B [Homo sapiens] |
Match: gi|114633330|ref|XP_001140810.1| |
score: 122 |
e-value: 1e-25 |
Identity: 48.61% |
Span: 432bp (20.3%) |
Frame: 3 |
PREDICTED: |
Match: gi|481241|pir||S38383 |
score: 122 |
e-value: 1e-25 |
Identity: 48.95% |
Span: 429bp (20.2%) |
Frame: 3 |
gi|481241|pir||S38383 SEB4B protein - human (fragment) |
Match: gi|82233813|sp|Q5ZJX4|RBM38_CHICK |
score: 122 |
e-value: 1e-25 |
Identity: 38.37% |
Span: 723bp (34.0%) |
Frame: 3 |
RecName: |
Match: gi|407419|emb|CAA53063.1| |
score: 122 |
e-value: 1e-25 |
Identity: 48.95% |
Span: 429bp (20.2%) |
Frame: 3 |
gi|407419|emb|CAA53063.1| SEB4D [Homo sapiens] |
Match: gi|481240|pir||S38382 |
score: 122 |
e-value: 1e-25 |
Identity: 48.95% |
Span: 429bp (20.2%) |
Frame: 3 |
gi|481240|pir||S38382 SEB4D protein - human (fragment) |
Match: gi|213624756|gb|AAI71537.1| |
score: 122 |
e-value: 1e-25 |
Identity: 39.19% |
Span: 573bp (26.9%) |
Frame: 3 |
RNA |
Match: gi|215275623|sp|Q7T3I7|RBM38_XENLA |
score: 122 |
e-value: 2e-25 |
Identity: 41.5% |
Span: 591bp (27.8%) |
Frame: 3 |
RecName: |
Match: gi|189530348|ref|XP_001918573.1| |
score: 121 |
e-value: 2e-25 |
Identity: 67.03% |
Span: 270bp (12.7%) |
Frame: 3 |
PREDICTED: |
|
151 lower scoring hits censored -- only 100 best hits are stored. |
arabidopsis/peptide [blastx] | Showing best 53 hits recorded |
Match: At1G76460.1 |
score: 255 |
e-value: 9e-68 |
Identity: 51.27% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE |
Match: At1G20880.1 |
score: 233 |
e-value: 3e-61 |
Identity: 48.21% |
Span: 762bp (35.8%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:7262868-7264823 REVERSE |
Match: At1G33470.2 |
score: 160 |
e-value: 4e-39 |
Identity: 42.86% |
Span: 624bp (29.3%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
Match: At1G78260.1 |
score: 160 |
e-value: 3e-39 |
Identity: 41.22% |
Span: 717bp (33.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:29452210-29455074 FORWARD |
Match: At1G78260.2 |
score: 160 |
e-value: 3e-39 |
Identity: 41.22% |
Span: 717bp (33.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:29452210-29454139 FORWARD |
Match: At1G33470.1 |
score: 157 |
e-value: 2e-38 |
Identity: 42.44% |
Span: 624bp (29.3%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
Match: At1G22330.1 |
score: 151 |
e-value: 2e-36 |
Identity: 54.29% |
Span: 414bp (19.4%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:7886682-7887571 FORWARD |
Match: At2G46780.1 |
score: 149 |
e-value: 5e-36 |
Identity: 49.11% |
Span: 477bp (22.4%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr2:19236586-19238017 FORWARD |
Match: At1G22910.2 |
score: 146 |
e-value: 6e-35 |
Identity: 50.32% |
Span: 447bp (21.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:8105797-8107607 FORWARD |
Match: At1G22910.3 |
score: 146 |
e-value: 6e-35 |
Identity: 50.32% |
Span: 447bp (21.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:8105797-8107938 FORWARD |
Match: At1G22910.1 |
score: 146 |
e-value: 6e-35 |
Identity: 50.32% |
Span: 447bp (21.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:8105797-8107648 FORWARD |
Match: At3G54770.1 |
score: 137 |
e-value: 2e-32 |
Identity: 40.85% |
Span: 657bp (30.9%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr3:20284841-20286805 REVERSE |
Match: At3G06970.1 |
score: 111 |
e-value: 2e-24 |
Identity: 41.22% |
Span: 438bp (20.6%) |
Frame: 3 |
RNA binding | chr3:2199659-2201156 REVERSE |
Match: At5G53680.1 |
score: 107 |
e-value: 3e-23 |
Identity: 56.63% |
Span: 249bp (11.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr5:21815608-21816335 FORWARD |
Match: At3G54770.2 |
score: 103 |
e-value: 4e-22 |
Identity: 38.69% |
Span: 585bp (27.5%) |
Frame: 3 |
RNA binding | chr3:20284841-20286709 REVERSE |
Match: At5G53720.1 |
score: 100 |
e-value: 5e-21 |
Identity: 59.49% |
Span: 237bp (11.1%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr5:21823848-21824238 FORWARD |
Match: At2G22090.2 |
score: 80.9 |
e-value: 3e-15 |
Identity: 32.02% |
Span: 534bp (25.1%) |
Frame: 3 |
Symbols: UBA1A | UBA1A; RNA binding | chr2:9396487-9397530 REVERSE |
Match: At2G22090.1 |
score: 80.9 |
e-value: 3e-15 |
Identity: 32.02% |
Span: 534bp (25.1%) |
Frame: 3 |
Symbols: UBA1A | UBA1A; AU-specific RNA binding / RNA binding | chr2:9395651-9397530 REVERSE |
Match: At3G07810.2 |
score: 79.7 |
e-value: 6e-15 |
Identity: 37.04% |
Span: 324bp (15.2%) |
Frame: 3 |
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
Match: At3G07810.1 |
score: 79.7 |
e-value: 6e-15 |
Identity: 37.04% |
Span: 324bp (15.2%) |
Frame: 3 |
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
Match: At3G15010.1 |
score: 78.2 |
e-value: 2e-14 |
Identity: 49.4% |
Span: 249bp (11.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr3:5052851-5054065 FORWARD |
Match: At3G15010.2 |
score: 78.2 |
e-value: 2e-14 |
Identity: 49.4% |
Span: 249bp (11.7%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr3:5052851-5054065 FORWARD |
Match: At5G47620.1 |
score: 77.8 |
e-value: 2e-14 |
Identity: 37.04% |
Span: 324bp (15.2%) |
Frame: 3 |
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
Match: At5G47620.2 |
score: 77.8 |
e-value: 2e-14 |
Identity: 37.04% |
Span: 324bp (15.2%) |
Frame: 3 |
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
Match: At4G26650.2 |
score: 77.4 |
e-value: 3e-14 |
Identity: 44% |
Span: 225bp (10.6%) |
Frame: 3 |
RNA binding | chr4:13445271-13447598 FORWARD |
Match: At4G26650.1 |
score: 77.4 |
e-value: 3e-14 |
Identity: 44% |
Span: 225bp (10.6%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
Match: At5G55550.1 |
score: 77 |
e-value: 4e-14 |
Identity: 44% |
Span: 225bp (10.6%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
Match: At5G55550.3 |
score: 77 |
e-value: 4e-14 |
Identity: 44% |
Span: 225bp (10.6%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
Match: At5G55550.2 |
score: 77 |
e-value: 4e-14 |
Identity: 44% |
Span: 225bp (10.6%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
Match: At2G41060.1 |
score: 76.6 |
e-value: 5e-14 |
Identity: 42.53% |
Span: 261bp (12.3%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr2:17134216-17135571 FORWARD |
Match: At2G41060.2 |
score: 76.6 |
e-value: 5e-14 |
Identity: 42.53% |
Span: 261bp (12.3%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr2:17134216-17135571 FORWARD |
Match: At4G13850.3 |
score: 75.5 |
e-value: 1e-13 |
Identity: 44.94% |
Span: 264bp (12.4%) |
Frame: 3 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
Match: At4G13850.2 |
score: 75.5 |
e-value: 1e-13 |
Identity: 44.94% |
Span: 264bp (12.4%) |
Frame: 3 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
Match: At4G13850.1 |
score: 75.5 |
e-value: 1e-13 |
Identity: 44.94% |
Span: 264bp (12.4%) |
Frame: 3 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
Match: At4G13850.4 |
score: 75.1 |
e-value: 2e-13 |
Identity: 46.43% |
Span: 249bp (11.7%) |
Frame: 3 |
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) | chr4:8021310-8022061 FORWARD |
Match: At3G56860.1 |
score: 73.9 |
e-value: 4e-13 |
Identity: 38.38% |
Span: 297bp (14.0%) |
Frame: 3 |
Symbols: UBA2A | UBA2A; RNA binding | chr3:21061687-21063123 REVERSE |
Match: At3G56860.3 |
score: 73.9 |
e-value: 4e-13 |
Identity: 38.38% |
Span: 297bp (14.0%) |
Frame: 3 |
Symbols: UBA2A | UBA2A; RNA binding | chr3:21061687-21063123 REVERSE |
Match: At3G56860.2 |
score: 73.9 |
e-value: 4e-13 |
Identity: 38.38% |
Span: 297bp (14.0%) |
Frame: 3 |
Symbols: UBA2A | UBA2A; AU-specific RNA binding / RNA binding | chr3:21061687-21063123 REVERSE |
Match: At2G22100.1 |
score: 73.6 |
e-value: 5e-13 |
Identity: 31.67% |
Span: 489bp (23.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr2:9399477-9400625 REVERSE |
Match: At2G21660.1 |
score: 72.8 |
e-value: 8e-13 |
Identity: 46.34% |
Span: 243bp (11.4%) |
Frame: 3 |
Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
Match: At2G21660.2 |
score: 72.8 |
e-value: 8e-13 |
Identity: 46.34% |
Span: 243bp (11.4%) |
Frame: 3 |
Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
Match: At4G39260.1 |
score: 71.2 |
e-value: 2e-12 |
Identity: 47.37% |
Span: 225bp (10.6%) |
Frame: 3 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At4G39260.3 |
score: 71.2 |
e-value: 2e-12 |
Identity: 47.37% |
Span: 225bp (10.6%) |
Frame: 3 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At4G39260.2 |
score: 71.2 |
e-value: 2e-12 |
Identity: 47.37% |
Span: 225bp (10.6%) |
Frame: 3 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At2G19380.1 |
score: 70.9 |
e-value: 3e-12 |
Identity: 43.21% |
Span: 243bp (11.4%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr2:8390938-8393686 FORWARD |
Match: At1G17640.1 |
score: 69.7 |
e-value: 7e-12 |
Identity: 40.85% |
Span: 213bp (10.0%) |
Frame: 3 |
RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
Match: At4G39260.4 |
score: 69.3 |
e-value: 9e-12 |
Identity: 54.72% |
Span: 159bp (7.5%) |
Frame: 3 |
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
Match: At4G14300.1 |
score: 68.9 |
e-value: 1e-11 |
Identity: 40.51% |
Span: 225bp (10.6%) |
Frame: 3 |
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
Match: At3G23830.2 |
score: 68.6 |
e-value: 1e-11 |
Identity: 43.59% |
Span: 231bp (10.9%) |
Frame: 3 |
Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
Match: At3G23830.1 |
score: 68.6 |
e-value: 1e-11 |
Identity: 43.59% |
Span: 231bp (10.9%) |
Frame: 3 |
Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
Match: At3G26420.1 |
score: 67.8 |
e-value: 3e-11 |
Identity: 44.93% |
Span: 204bp (9.6%) |
Frame: 3 |
Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
Match: At1G74230.1 |
score: 66.6 |
e-value: 6e-11 |
Identity: 30.41% |
Span: 513bp (24.1%) |
Frame: 3 |
Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
Match: At2G33410.1 |
score: 65.9 |
e-value: 1e-10 |
Identity: 39.19% |
Span: 210bp (9.9%) |
Frame: 3 |
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr2:14163161-14164511 FORWARD |
|
swissprot [blastx] | Showing best 28 hits recorded |
Match: Q6P8A7 |
score: 130 |
e-value: 4e-29 |
Identity: 36.86% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1 |
Match: Q76LC6 |
score: 130 |
e-value: 3e-29 |
Identity: 45.81% |
Span: 534bp (25.1%) |
Frame: 3 |
RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1 |
Match: Q62176 |
score: 129 |
e-value: 5e-29 |
Identity: 42.58% |
Span: 576bp (27.1%) |
Frame: 3 |
RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=2 SV=2 |
Match: Q5ZMA3 |
score: 128 |
e-value: 1e-28 |
Identity: 36.58% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2 |
Match: Q9I8B3 |
score: 127 |
e-value: 2e-28 |
Identity: 37.65% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1 |
Match: Q6GQD3 |
score: 127 |
e-value: 2e-28 |
Identity: 37.25% |
Span: 753bp (35.4%) |
Frame: 3 |
RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1 |
Match: Q9BX46 |
score: 125 |
e-value: 1e-27 |
Identity: 37.14% |
Span: 711bp (33.4%) |
Frame: 3 |
RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1 SV=1 |
Match: Q9H0Z9 |
score: 125 |
e-value: 1e-27 |
Identity: 40.78% |
Span: 576bp (27.1%) |
Frame: 3 |
RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2 |
Match: P48809 |
score: 78.2 |
e-value: 2e-13 |
Identity: 46.43% |
Span: 243bp (11.4%) |
Frame: 3 |
Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2 |
Match: Q9SVM8 |
score: 75.5 |
e-value: 1e-12 |
Identity: 44.94% |
Span: 264bp (12.4%) |
Frame: 3 |
Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1 |
Match: Q96EP5 |
score: 74.7 |
e-value: 2e-12 |
Identity: 40% |
Span: 255bp (12.0%) |
Frame: 3 |
DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 |
Match: Q9JII5 |
score: 74.7 |
e-value: 2e-12 |
Identity: 40% |
Span: 255bp (12.0%) |
Frame: 3 |
DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2 |
Match: Q98SJ2 |
score: 74.7 |
e-value: 2e-12 |
Identity: 40% |
Span: 255bp (12.0%) |
Frame: 3 |
DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1 |
Match: O94432 |
score: 74.7 |
e-value: 2e-12 |
Identity: 45.95% |
Span: 210bp (9.9%) |
Frame: 3 |
Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1 |
Match: Q96DH6 |
score: 73.2 |
e-value: 6e-12 |
Identity: 41.98% |
Span: 243bp (11.4%) |
Frame: 3 |
RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1 |
Match: Q920Q6 |
score: 73.2 |
e-value: 6e-12 |
Identity: 41.98% |
Span: 243bp (11.4%) |
Frame: 3 |
RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1 |
Match: P10979 |
score: 73.2 |
e-value: 6e-12 |
Identity: 44.44% |
Span: 291bp (13.7%) |
Frame: 3 |
Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1 |
Match: Q03250 |
score: 72.8 |
e-value: 7e-12 |
Identity: 46.34% |
Span: 243bp (11.4%) |
Frame: 3 |
Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1 |
Match: Q03878 |
score: 72.8 |
e-value: 7e-12 |
Identity: 48.68% |
Span: 225bp (10.6%) |
Frame: 3 |
Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1 |
Match: Q99070 |
score: 72.4 |
e-value: 1e-11 |
Identity: 47.37% |
Span: 225bp (10.6%) |
Frame: 3 |
Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1 |
Match: O43347 |
score: 71.6 |
e-value: 2e-11 |
Identity: 28.05% |
Span: 681bp (32.0%) |
Frame: 3 |
RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1 |
Match: Q8K3P4 |
score: 71.2 |
e-value: 2e-11 |
Identity: 28.05% |
Span: 681bp (32.0%) |
Frame: 3 |
RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1 |
Match: Q61474 |
score: 71.2 |
e-value: 2e-11 |
Identity: 28.05% |
Span: 681bp (32.0%) |
Frame: 3 |
RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1 |
Match: Q03251 |
score: 71.2 |
e-value: 2e-11 |
Identity: 47.37% |
Span: 225bp (10.6%) |
Frame: 3 |
Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1 |
Match: P41891 |
score: 70.9 |
e-value: 3e-11 |
Identity: 45.05% |
Span: 270bp (12.7%) |
Frame: 3 |
Protein gar2 OS=Schizosaccharomyces pombe GN=gar2 PE=1 SV=2 |
Match: Q96DH6 |
score: 69.7 |
e-value: 6e-11 |
Identity: 31.58% |
Span: 420bp (19.7%) |
Frame: 3 |
RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1 |
Match: Q920Q6 |
score: 69.7 |
e-value: 6e-11 |
Identity: 31.58% |
Span: 420bp (19.7%) |
Frame: 3 |
RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1 |
Match: P49311 |
score: 69.7 |
e-value: 6e-11 |
Identity: 44.74% |
Span: 225bp (10.6%) |
Frame: 3 |
Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1 |
|