| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|147866286|emb|CAN79926.1| |
score: 934 |
e-value: 0 |
Identity: 83.05% |
Span: 1914bp (83.2%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157345610|emb|CAO14908.1| |
score: 934 |
e-value: 0 |
Identity: 83.05% |
Span: 1914bp (83.2%) |
Frame: 2 |
| unnamed |
| Match: gi|75218951|sp|O04235|SSRP1_VICFA |
score: 899 |
e-value: 0 |
Identity: 79.75% |
Span: 1914bp (83.2%) |
Frame: 2 |
| FACT |
| Match: gi|2495256|sp|Q39601|SSRP1_CATRO |
score: 884 |
e-value: 0 |
Identity: 79.66% |
Span: 1914bp (83.2%) |
Frame: 2 |
| FACT |
| Match: gi|162462425|ref|NP_001105124.1| |
score: 770 |
e-value: 0 |
Identity: 68.8% |
Span: 1908bp (82.9%) |
Frame: 2 |
| SSRP1 protein [Zea mays] >gi75263808|sp|Q9LEF5.1|SSRP1_MAIZE RecName: Full=FACT complex subunit SSRP1; AltName: Full=... |
| Match: gi|21314337|gb|AAM46895.1|AF503585_1 |
score: 764 |
e-value: 0 |
Identity: 65.27% |
Span: 1917bp (83.3%) |
Frame: 2 |
| early drought induced protein [Oryza sativa Indica Group] >gi218187645|gb|EEC70072.1| hypothetical protein OsI_00684 ... |
| Match: gi|115434958|ref|NP_001042237.1| |
score: 764 |
e-value: 0 |
Identity: 65.27% |
Span: 1917bp (83.3%) |
Frame: 2 |
| Os01g0184900 [Oryza sativa (japonica cultivar-group)] >gi75263890|sp|Q9LGR0.1|SSP1A_ORYSJ RecName: Full=FACT complex ... |
| Match: gi|195604724|gb|ACG24192.1| |
score: 761 |
e-value: 0 |
Identity: 67.53% |
Span: 1908bp (82.9%) |
Frame: 2 |
| structure-specific recognition protein 1 [Zea mays] |
| Match: gi|115462441|ref|NP_001054820.1| |
score: 760 |
e-value: 0 |
Identity: 67.34% |
Span: 1908bp (82.9%) |
Frame: 2 |
| Os05g0182600 [Oryza sativa (japonica cultivar-group)] >gi75253362|sp|Q65WY8.1|SSP1B_ORYSJ RecName: Full=FACT complex ... |
| Match: gi|15228471|ref|NP_189515.1| |
score: 741 |
e-value: 0 |
Identity: 78.06% |
Span: 1416bp (61.5%) |
Frame: 2 |
| ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor [Arabidopsis thaliana] >gi26454672|sp|Q05153.2... |
| Match: gi|125569312|gb|EAZ10827.1| |
score: 729 |
e-value: 0 |
Identity: 64.2% |
Span: 1866bp (81.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|217853|dbj|BAA02719.1| |
score: 703 |
e-value: 0 |
Identity: 75.11% |
Span: 1416bp (61.5%) |
Frame: 2 |
| high mobility group protein [Arabidopsis thaliana] |
| Match: gi|168047021|ref|XP_001775970.1| |
score: 660 |
e-value: 0 |
Identity: 68.7% |
Span: 1410bp (61.3%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162672628|gb|EDQ59162.1| predicted protein [Physcomitrella... |
| Match: gi|145356938|ref|XP_001422680.1| |
score: 303 |
e-value: 3e-80 |
Identity: 38.2% |
Span: 1305bp (56.7%) |
Frame: 2 |
| predicted |
| Match: gi|156379246|ref|XP_001631369.1| |
score: 302 |
e-value: 1e-79 |
Identity: 36.62% |
Span: 1278bp (55.5%) |
Frame: 2 |
| predicted protein [Nematostella vectensis] >gi156218408|gb|EDO39306.1| predicted protein [Nematostella vectensis] |
| Match: gi|49250826|gb|AAH74541.1| |
score: 296 |
e-value: 6e-78 |
Identity: 35.91% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|49250826|gb|AAH74541.1| Ssrp1 protein [Xenopus tropicalis] |
| Match: gi|159462694|ref|XP_001689577.1| |
score: 296 |
e-value: 7e-78 |
Identity: 45.21% |
Span: 1065bp (46.3%) |
Frame: 2 |
| high mobility group protein [Chlamydomonas reinhardtii] >gi158283565|gb|EDP09315.1| high mobility group protein [Chla... |
| Match: gi|47086431|ref|NP_997967.1| |
score: 294 |
e-value: 2e-77 |
Identity: 35.24% |
Span: 1413bp (61.4%) |
Frame: 2 |
| gi|47086431|ref|NP_997967.1| structure specific recognition protein 1 [Danio rerio] >gi|33604076|gb|AAH56311.1| Struc... |
| Match: gi|126333240|ref|XP_001376238.1| |
score: 293 |
e-value: 5e-77 |
Identity: 35.23% |
Span: 1320bp (57.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|148226156|ref|NP_001084164.1| |
score: 291 |
e-value: 2e-76 |
Identity: 35.68% |
Span: 1320bp (57.4%) |
Frame: 2 |
| DUF87 |
| Match: gi|52138889|gb|AAH82613.1| |
score: 291 |
e-value: 2e-76 |
Identity: 35.68% |
Span: 1320bp (57.4%) |
Frame: 2 |
| Unknown |
| Match: gi|218117885|dbj|BAH03305.1| |
score: 290 |
e-value: 4e-76 |
Identity: 34.77% |
Span: 1320bp (57.4%) |
Frame: 2 |
| structure-specific recognition protein 1 [Gallus gallus] |
| Match: gi|73982285|ref|XP_859991.1| |
score: 290 |
e-value: 4e-76 |
Identity: 34.3% |
Span: 1347bp (58.5%) |
Frame: 2 |
| gi|73982285|ref|XP_859991.1| PREDICTED: similar to structure specific recognition protein 1 isoform 5 [Canis familiar... |
| Match: gi|57524786|ref|NP_001005796.1| |
score: 290 |
e-value: 4e-76 |
Identity: 34.77% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit SSRP1 [Gallus gallus] >gi110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SS... |
| Match: gi|123229649|emb|CAM22342.1| |
score: 290 |
e-value: 5e-76 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| structure |
| Match: gi|54020668|ref|NP_112383.1| |
score: 290 |
e-value: 5e-76 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| Structure |
| Match: gi|116283314|gb|AAH04848.1| |
score: 290 |
e-value: 5e-76 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| Unknown |
| Match: gi|27502780|gb|AAH42502.1| |
score: 290 |
e-value: 5e-76 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| Structure |
| Match: gi|111154063|ref|NP_892035.2| |
score: 290 |
e-value: 5e-76 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| structure |
| Match: gi|109106294|ref|XP_001103334.1| |
score: 289 |
e-value: 7e-76 |
Identity: 34.77% |
Span: 1320bp (57.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|194218091|ref|XP_001497140.2| |
score: 289 |
e-value: 7e-76 |
Identity: 34.77% |
Span: 1320bp (57.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|73982283|ref|XP_859953.1| |
score: 289 |
e-value: 9e-76 |
Identity: 34.55% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|73982283|ref|XP_859953.1| PREDICTED: similar to structure specific recognition protein 1 isoform 4 [Canis familiar... |
| Match: gi|60552474|gb|AAH91486.1| |
score: 289 |
e-value: 9e-76 |
Identity: 34.55% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|60552474|gb|AAH91486.1| SSRP1 protein [Homo sapiens] |
| Match: gi|73982281|ref|XP_849848.1| |
score: 289 |
e-value: 9e-76 |
Identity: 34.55% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|73982281|ref|XP_849848.1| PREDICTED: similar to structure specific recognition protein 1 isoform 3 [Canis familiar... |
| Match: gi|4507241|ref|NP_003137.1| |
score: 289 |
e-value: 9e-76 |
Identity: 34.55% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|4507241|ref|NP_003137.1| structure specific recognition protein 1; recombination signal sequence recognition prote... |
| Match: gi|155371817|ref|NP_001094511.1| |
score: 289 |
e-value: 9e-76 |
Identity: 34.55% |
Span: 1320bp (57.4%) |
Frame: 2 |
| structure |
| Match: gi|66803987|ref|XP_635805.1| |
score: 287 |
e-value: 3e-75 |
Identity: 37.04% |
Span: 1305bp (56.7%) |
Frame: 2 |
| gi|66803987|ref|XP_635805.1| structure-specific recognition protein 1 [Dictyostelium discoideum] >gi|60464131|gb|EAL6... |
| Match: gi|50417356|gb|AAH77083.1| |
score: 287 |
e-value: 3e-75 |
Identity: 34.77% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|50417356|gb|AAH77083.1| Im:7140964 protein [Danio rerio] |
| Match: gi|189515416|ref|XP_001923156.1| |
score: 287 |
e-value: 3e-75 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|213407046|ref|XP_002174294.1| |
score: 286 |
e-value: 6e-75 |
Identity: 36.36% |
Span: 1266bp (55.0%) |
Frame: 2 |
| FACT |
| Match: gi|8170740|gb|AAB19500.2| |
score: 284 |
e-value: 3e-74 |
Identity: 33.9% |
Span: 1413bp (61.4%) |
Frame: 2 |
| gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.] >gi|730841|sp|Q08943|SSRP_MOUSE Structure-specif... |
| Match: gi|119189221|ref|XP_001245217.1| |
score: 283 |
e-value: 6e-74 |
Identity: 34.37% |
Span: 1260bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|115400027|ref|XP_001215602.1| |
score: 282 |
e-value: 1e-73 |
Identity: 35.09% |
Span: 1263bp (54.9%) |
Frame: 2 |
| conserved |
| Match: gi|145614364|ref|XP_365915.2| |
score: 282 |
e-value: 8e-74 |
Identity: 34.48% |
Span: 1263bp (54.9%) |
Frame: 2 |
| hypothetical |
| Match: gi|146324848|ref|XP_748973.2| |
score: 279 |
e-value: 7e-73 |
Identity: 34.04% |
Span: 1320bp (57.4%) |
Frame: 2 |
| structure-specific |
| Match: gi|219436675|ref|XP_002216115.1| |
score: 278 |
e-value: 2e-72 |
Identity: 34.7% |
Span: 1314bp (57.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|119482904|ref|XP_001261480.1| |
score: 278 |
e-value: 2e-72 |
Identity: 34.36% |
Span: 1260bp (54.8%) |
Frame: 2 |
| structure-specific |
| Match: gi|219472644|ref|XP_002233780.1| |
score: 278 |
e-value: 2e-72 |
Identity: 34.7% |
Span: 1314bp (57.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|211582061|emb|CAP80225.1| |
score: 278 |
e-value: 2e-72 |
Identity: 34.29% |
Span: 1260bp (54.8%) |
Frame: 2 |
| Pc12g05980 |
| Match: gi|218717561|gb|EED16982.1| |
score: 277 |
e-value: 3e-72 |
Identity: 34.79% |
Span: 1263bp (54.9%) |
Frame: 2 |
| structure-specific |
| Match: gi|121711513|ref|XP_001273372.1| |
score: 277 |
e-value: 3e-72 |
Identity: 33.85% |
Span: 1260bp (54.8%) |
Frame: 2 |
| structure-specific |
| Match: gi|85078552|ref|XP_956186.1| |
score: 276 |
e-value: 5e-72 |
Identity: 32.66% |
Span: 1263bp (54.9%) |
Frame: 2 |
| hypothetical |
| Match: gi|67541034|ref|XP_664291.1| |
score: 276 |
e-value: 8e-72 |
Identity: 34.03% |
Span: 1323bp (57.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|212539794|ref|XP_002150052.1| |
score: 276 |
e-value: 8e-72 |
Identity: 34.64% |
Span: 1260bp (54.8%) |
Frame: 2 |
| structure-specific |
| Match: gi|171686954|ref|XP_001908418.1| |
score: 275 |
e-value: 1e-71 |
Identity: 32.58% |
Span: 1260bp (54.8%) |
Frame: 2 |
| unnamed |
| Match: gi|145237444|ref|XP_001391369.1| |
score: 275 |
e-value: 2e-71 |
Identity: 34.06% |
Span: 1260bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|158300246|ref|XP_320213.4| |
score: 274 |
e-value: 2e-71 |
Identity: 36.44% |
Span: 1416bp (61.5%) |
Frame: 2 |
| AGAP012335-PA |
| Match: gi|196010223|ref|XP_002114976.1| |
score: 273 |
e-value: 5e-71 |
Identity: 33.48% |
Span: 1407bp (61.1%) |
Frame: 2 |
| hypothetical |
| Match: gi|193662252|ref|XP_001950286.1| |
score: 273 |
e-value: 4e-71 |
Identity: 33.33% |
Span: 1398bp (60.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|110287973|sp|Q293F6|SSRP1_DROPS |
score: 272 |
e-value: 1e-70 |
Identity: 35.2% |
Span: 1338bp (58.1%) |
Frame: 2 |
| FACT |
| Match: gi|195148932|ref|XP_002015416.1| |
score: 272 |
e-value: 1e-70 |
Identity: 35.2% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GL11071 |
| Match: gi|169765954|ref|XP_001817448.1| |
score: 271 |
e-value: 2e-70 |
Identity: 33.7% |
Span: 1260bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|50420839|ref|XP_458960.1| |
score: 271 |
e-value: 2e-70 |
Identity: 35.27% |
Span: 1266bp (55.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|190344865|gb|EDK36631.2| |
score: 270 |
e-value: 6e-70 |
Identity: 34.95% |
Span: 1263bp (54.9%) |
Frame: 2 |
| hypothetical |
| Match: gi|157129263|ref|XP_001655339.1| |
score: 270 |
e-value: 6e-70 |
Identity: 36.55% |
Span: 1305bp (56.7%) |
Frame: 2 |
| structure-specific |
| Match: gi|195489309|ref|XP_002092681.1| |
score: 270 |
e-value: 4e-70 |
Identity: 35.2% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GE11532 |
| Match: gi|195025405|ref|XP_001986052.1| |
score: 270 |
e-value: 4e-70 |
Identity: 34.75% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GH21151 |
| Match: gi|170033411|ref|XP_001844571.1| |
score: 270 |
e-value: 3e-70 |
Identity: 36.59% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT |
| Match: gi|24762396|ref|NP_523830.2| |
score: 269 |
e-value: 9e-70 |
Identity: 34.98% |
Span: 1338bp (58.1%) |
Frame: 2 |
| gi|24762396|ref|NP_523830.2| Structure specific recognition protein CG4817-PA [Drosophila melanogaster] gi|12644386|s... |
| Match: gi|28557563|gb|AAO45187.1| |
score: 269 |
e-value: 9e-70 |
Identity: 34.98% |
Span: 1338bp (58.1%) |
Frame: 2 |
| gi|28557563|gb|AAO45187.1| SD06504p [Drosophila melanogaster] |
| Match: gi|194752689|ref|XP_001958652.1| |
score: 269 |
e-value: 9e-70 |
Identity: 34.98% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GF12460 |
| Match: gi|195347200|ref|XP_002040142.1| |
score: 269 |
e-value: 9e-70 |
Identity: 34.98% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GM15512 |
| Match: gi|194885620|ref|XP_001976465.1| |
score: 269 |
e-value: 9e-70 |
Identity: 35.2% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GG19998 |
| Match: gi|156553871|ref|XP_001600877.1| |
score: 268 |
e-value: 2e-69 |
Identity: 35.25% |
Span: 1302bp (56.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|118344004|ref|NP_001071827.1| |
score: 268 |
e-value: 2e-69 |
Identity: 33.4% |
Span: 1416bp (61.5%) |
Frame: 2 |
| transcription |
| Match: gi|110766132|ref|XP_001120264.1| |
score: 268 |
e-value: 2e-69 |
Identity: 35.17% |
Span: 1305bp (56.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|195123163|ref|XP_002006078.1| |
score: 267 |
e-value: 3e-69 |
Identity: 34.53% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GI18750 |
| Match: gi|195436362|ref|XP_002066137.1| |
score: 267 |
e-value: 3e-69 |
Identity: 35.43% |
Span: 1338bp (58.1%) |
Frame: 2 |
| GK22092 |
| Match: gi|68466813|ref|XP_722602.1| |
score: 267 |
e-value: 3e-69 |
Identity: 34.32% |
Span: 1260bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|211520|gb|AAA48685.1| |
score: 267 |
e-value: 3e-69 |
Identity: 36.08% |
Span: 1164bp (50.6%) |
Frame: 2 |
| HMG |
| Match: gi|195382097|ref|XP_002049768.1| |
score: 267 |
e-value: 3e-69 |
Identity: 34.76% |
Span: 1329bp (57.8%) |
Frame: 2 |
| GJ21774 |
| Match: gi|47215698|emb|CAG04782.1| |
score: 266 |
e-value: 5e-69 |
Identity: 32.29% |
Span: 1320bp (57.4%) |
Frame: 2 |
| gi|47215698|emb|CAG04782.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|212507684|gb|EEB11546.1| |
score: 266 |
e-value: 5e-69 |
Identity: 34.61% |
Span: 1332bp (57.9%) |
Frame: 2 |
| predicted |
| Match: gi|19113107|ref|NP_596315.1| |
score: 266 |
e-value: 6e-69 |
Identity: 34.01% |
Span: 1305bp (56.7%) |
Frame: 2 |
| gi|19113107|ref|NP_596315.1| similar to yeast POB3 protein that binds to DNA polymerase I; putative structure specifi... |
| Match: gi|195586162|ref|XP_002082847.1| |
score: 265 |
e-value: 2e-68 |
Identity: 35.55% |
Span: 1308bp (56.8%) |
Frame: 2 |
| GD25013 |
| Match: gi|150865428|ref|XP_001384641.2| |
score: 265 |
e-value: 1e-68 |
Identity: 33.26% |
Span: 1266bp (55.0%) |
Frame: 2 |
| DNA |
| Match: gi|116054804|emb|CAL56881.1| |
score: 264 |
e-value: 3e-68 |
Identity: 35.68% |
Span: 1299bp (56.5%) |
Frame: 2 |
| recombination |
| Match: gi|290280|gb|AAA28914.1| |
score: 263 |
e-value: 5e-68 |
Identity: 34.53% |
Span: 1338bp (58.1%) |
Frame: 2 |
| gi|290280|gb|AAA28914.1| single-stranded recognition protein |
| Match: gi|146422835|ref|XP_001487352.1| |
score: 263 |
e-value: 7e-68 |
Identity: 34.95% |
Span: 1263bp (54.9%) |
Frame: 2 |
| hypothetical |
| Match: gi|169596308|ref|XP_001791578.1| |
score: 261 |
e-value: 2e-67 |
Identity: 34.22% |
Span: 1260bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|91091374|ref|XP_973014.1| |
score: 261 |
e-value: 2e-67 |
Identity: 34.48% |
Span: 1305bp (56.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|149247649|ref|XP_001528233.1| |
score: 260 |
e-value: 4e-67 |
Identity: 33.48% |
Span: 1260bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|215503398|gb|EEC12892.1| |
score: 258 |
e-value: 1e-66 |
Identity: 32.79% |
Span: 1278bp (55.5%) |
Frame: 2 |
| structure-specific |
| Match: gi|169647789|gb|ACA61896.1| |
score: 258 |
e-value: 2e-66 |
Identity: 34.82% |
Span: 1275bp (55.4%) |
Frame: 2 |
| CG4797 |
| Match: gi|169647775|gb|ACA61889.1| |
score: 257 |
e-value: 3e-66 |
Identity: 35.06% |
Span: 1275bp (55.4%) |
Frame: 2 |
| CG4797 |
| Match: gi|169647785|gb|ACA61894.1| |
score: 256 |
e-value: 6e-66 |
Identity: 34.82% |
Span: 1275bp (55.4%) |
Frame: 2 |
| CG4797 |
| Match: gi|15228471|ref|NP_189515.1| |
score: 134 |
e-value: 3e-29 |
Identity: 67.05% |
Span: 264bp (11.5%) |
Frame: 2 |
| ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor [Arabidopsis thaliana] >gi26454672|sp|Q05153.2... |
| Match: gi|217853|dbj|BAA02719.1| |
score: 108 |
e-value: 3e-21 |
Identity: 59.3% |
Span: 258bp (11.2%) |
Frame: 2 |
| high mobility group protein [Arabidopsis thaliana] |
| Match: gi|159462694|ref|XP_001689577.1| |
score: 88.6 |
e-value: 2e-15 |
Identity: 65.57% |
Span: 183bp (8.0%) |
Frame: 2 |
| high mobility group protein [Chlamydomonas reinhardtii] >gi158283565|gb|EDP09315.1| high mobility group protein [Chla... |
| Match: gi|168047021|ref|XP_001775970.1| |
score: 75.9 |
e-value: 2e-11 |
Identity: 49.33% |
Span: 216bp (9.4%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162672628|gb|EDQ59162.1| predicted protein [Physcomitrella... |
|
| 140 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At3G28730.1 |
score: 741 |
e-value: 0 |
Identity: 78.06% |
Span: 1416bp (61.5%) |
Frame: 2 |
| Symbols: SSRP1, NFD, ATHMG | ATHMG (HIGH MOBILITY GROUP, STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1); transcription fa... |
| Match: At3G28730.1 |
score: 134 |
e-value: 2e-31 |
Identity: 67.05% |
Span: 264bp (11.5%) |
Frame: 2 |
| Symbols: SSRP1, NFD, ATHMG | ATHMG (HIGH MOBILITY GROUP, STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1); transcription fa... |
|
| swissprot [blastx] | Showing best 56 hits recorded |
| Match: O04235 |
score: 899 |
e-value: 0 |
Identity: 79.75% |
Span: 1914bp (83.2%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Vicia faba GN=SSRP1 PE=2 SV=1 |
| Match: Q39601 |
score: 884 |
e-value: 0 |
Identity: 79.66% |
Span: 1914bp (83.2%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Catharanthus roseus GN=SSRP1 PE=2 SV=1 |
| Match: Q9LEF5 |
score: 770 |
e-value: 0 |
Identity: 68.8% |
Span: 1908bp (82.9%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Zea mays GN=SSRP1 PE=1 SV=1 |
| Match: Q9LGR0 |
score: 764 |
e-value: 0 |
Identity: 65.27% |
Span: 1917bp (83.3%) |
Frame: 2 |
| FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica GN=SSRP1-A PE=2 SV=1 |
| Match: Q65WY8 |
score: 760 |
e-value: 0 |
Identity: 67.34% |
Span: 1908bp (82.9%) |
Frame: 2 |
| FACT complex subunit SSRP1-B OS=Oryza sativa subsp. japonica GN=SSRP1-B PE=2 SV=1 |
| Match: Q05153 |
score: 741 |
e-value: 0 |
Identity: 78.06% |
Span: 1416bp (61.5%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 PE=1 SV=2 |
| Match: Q9W602 |
score: 291 |
e-value: 1e-77 |
Identity: 35.68% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Xenopus laevis GN=ssrp1 PE=1 SV=1 |
| Match: Q08943 |
score: 290 |
e-value: 3e-77 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Mus musculus GN=Ssrp1 PE=1 SV=2 |
| Match: Q04931 |
score: 290 |
e-value: 3e-77 |
Identity: 34.53% |
Span: 1413bp (61.4%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1 PE=1 SV=2 |
| Match: Q04678 |
score: 290 |
e-value: 2e-77 |
Identity: 34.77% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2 SV=2 |
| Match: Q08945 |
score: 289 |
e-value: 6e-77 |
Identity: 34.55% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1 |
| Match: Q54G78 |
score: 287 |
e-value: 2e-76 |
Identity: 37.04% |
Span: 1305bp (56.7%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Dictyostelium discoideum GN=ssrp1 PE=3 SV=1 |
| Match: Q4WGK6 |
score: 279 |
e-value: 4e-74 |
Identity: 34.04% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit pob3 OS=Aspergillus fumigatus GN=pob3 PE=3 SV=2 |
| Match: Q7RWW0 |
score: 276 |
e-value: 3e-73 |
Identity: 32.66% |
Span: 1263bp (54.9%) |
Frame: 2 |
| FACT complex subunit pob-3 OS=Neurospora crassa GN=pob-3 PE=3 SV=1 |
| Match: Q5AYE3 |
score: 276 |
e-value: 5e-73 |
Identity: 34.03% |
Span: 1323bp (57.5%) |
Frame: 2 |
| FACT complex subunit pob3 OS=Emericella nidulans GN=pob3 PE=3 SV=1 |
| Match: Q293F6 |
score: 272 |
e-value: 7e-72 |
Identity: 35.2% |
Span: 1338bp (58.1%) |
Frame: 2 |
| FACT complex subunit Ssrp1 OS=Drosophila pseudoobscura pseudoobscura GN=Ssrp PE=3 SV=2 |
| Match: Q6BS60 |
score: 271 |
e-value: 1e-71 |
Identity: 35.27% |
Span: 1266bp (55.0%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Debaryomyces hansenii GN=POB3 PE=3 SV=1 |
| Match: Q2USL9 |
score: 271 |
e-value: 2e-71 |
Identity: 33.7% |
Span: 1260bp (54.8%) |
Frame: 2 |
| FACT complex subunit pob3 OS=Aspergillus oryzae GN=pob3 PE=3 SV=1 |
| Match: Q05344 |
score: 269 |
e-value: 6e-71 |
Identity: 34.98% |
Span: 1338bp (58.1%) |
Frame: 2 |
| FACT complex subunit Ssrp1 OS=Drosophila melanogaster GN=Ssrp PE=1 SV=2 |
| Match: Q4H2R2 |
score: 268 |
e-value: 1e-70 |
Identity: 33.4% |
Span: 1416bp (61.5%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Ciona intestinalis GN=SSRP1 PE=2 SV=1 |
| Match: Q5ALL8 |
score: 267 |
e-value: 2e-70 |
Identity: 34.32% |
Span: 1260bp (54.8%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Candida albicans GN=POB3 PE=3 SV=1 |
| Match: O94529 |
score: 266 |
e-value: 4e-70 |
Identity: 34.01% |
Span: 1305bp (56.7%) |
Frame: 2 |
| FACT complex subunit pob3 OS=Schizosaccharomyces pombe GN=pob3 PE=2 SV=1 |
| Match: Q4IJU0 |
score: 256 |
e-value: 5e-67 |
Identity: 31% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Gibberella zeae GN=POB3 PE=3 SV=1 |
| Match: Q6C7V4 |
score: 254 |
e-value: 1e-66 |
Identity: 32.54% |
Span: 1260bp (54.8%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Yarrowia lipolytica GN=POB3 PE=3 SV=1 |
| Match: Q6FKI2 |
score: 253 |
e-value: 3e-66 |
Identity: 31.4% |
Span: 1260bp (54.8%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Candida glabrata GN=POB3 PE=3 SV=1 |
| Match: Q756X6 |
score: 248 |
e-value: 1e-64 |
Identity: 30.04% |
Span: 1263bp (54.9%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Ashbya gossypii GN=POB3 |
| Match: Q4P647 |
score: 246 |
e-value: 4e-64 |
Identity: 31.32% |
Span: 1320bp (57.4%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Ustilago maydis GN=POB3 PE=3 SV=1 |
| Match: Q04636 |
score: 240 |
e-value: 2e-62 |
Identity: 29.85% |
Span: 1263bp (54.9%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Saccharomyces cerevisiae GN=POB3 |
| Match: Q6CWD7 |
score: 239 |
e-value: 4e-62 |
Identity: 29.11% |
Span: 1302bp (56.6%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Kluyveromyces lactis GN=POB3 |
| Match: P41848 |
score: 232 |
e-value: 8e-60 |
Identity: 31.45% |
Span: 1326bp (57.6%) |
Frame: 2 |
| FACT complex subunit SSRP1-A OS=Caenorhabditis elegans GN=hmg-4 PE=2 SV=1 |
| Match: Q5KD17 |
score: 229 |
e-value: 7e-59 |
Identity: 31.45% |
Span: 1302bp (56.6%) |
Frame: 2 |
| FACT complex subunit POB3 OS=Cryptococcus neoformans GN=POB3 PE=3 SV=1 |
| Match: O01683 |
score: 220 |
e-value: 2e-56 |
Identity: 30.57% |
Span: 1305bp (56.7%) |
Frame: 2 |
| FACT complex subunit ssrp1-B OS=Caenorhabditis elegans GN=hmg-3 |
| Match: Q05153 |
score: 134 |
e-value: 2e-30 |
Identity: 67.05% |
Span: 264bp (11.5%) |
Frame: 2 |
| FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 PE=1 SV=2 |
| Match: Q7S045 |
score: 93.2 |
e-value: 6e-18 |
Identity: 53.52% |
Span: 213bp (9.3%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Neurospora crassa GN=nhp-6 PE=3 SV=1 |
| Match: Q4IQX3 |
score: 92.8 |
e-value: 8e-18 |
Identity: 52% |
Span: 225bp (9.8%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Gibberella zeae GN=NHP6 |
| Match: Q75B82 |
score: 92 |
e-value: 1e-17 |
Identity: 59.7% |
Span: 201bp (8.7%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Ashbya gossypii GN=NHP6 |
| Match: Q5B995 |
score: 89.7 |
e-value: 6e-17 |
Identity: 51.39% |
Span: 216bp (9.4%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Emericella nidulans GN=nhp6 |
| Match: Q6CVH3 |
score: 89.7 |
e-value: 6e-17 |
Identity: 56.72% |
Span: 201bp (8.7%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Kluyveromyces lactis GN=NHP6 |
| Match: Q4WY33 |
score: 89.7 |
e-value: 6e-17 |
Identity: 50.67% |
Span: 225bp (9.8%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Aspergillus fumigatus GN=nhp6 |
| Match: P11633 |
score: 89.4 |
e-value: 8e-17 |
Identity: 55.22% |
Span: 201bp (8.7%) |
Frame: 2 |
| Non-histone chromosomal protein 6B OS=Saccharomyces cerevisiae GN=NHP6B |
| Match: Q6CC79 |
score: 88.2 |
e-value: 2e-16 |
Identity: 52.78% |
Span: 216bp (9.4%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Yarrowia lipolytica GN=NHP6 |
| Match: P11632 |
score: 86.7 |
e-value: 5e-16 |
Identity: 55.22% |
Span: 201bp (8.7%) |
Frame: 2 |
| Non-histone chromosomal protein 6A OS=Saccharomyces cerevisiae GN=NHP6A |
| Match: Q9UVL1 |
score: 85.9 |
e-value: 9e-16 |
Identity: 49.3% |
Span: 213bp (9.3%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Candida albicans GN=NHP6 |
| Match: Q5KEP6 |
score: 83.6 |
e-value: 5e-15 |
Identity: 50% |
Span: 216bp (9.4%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Cryptococcus neoformans GN=NHP6 |
| Match: Q6BRB4 |
score: 82.8 |
e-value: 8e-15 |
Identity: 47.89% |
Span: 213bp (9.3%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Debaryomyces hansenii GN=NHP6 |
| Match: P87057 |
score: 79 |
e-value: 1e-13 |
Identity: 41.86% |
Span: 258bp (11.2%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Schizosaccharomyces pombe GN=nhp6 |
| Match: Q4PBZ9 |
score: 78.6 |
e-value: 1e-13 |
Identity: 49.3% |
Span: 213bp (9.3%) |
Frame: 2 |
| Non-histone chromosomal protein 6 OS=Ustilago maydis GN=NHP6 |
| Match: Q55C24 |
score: 73.2 |
e-value: 6e-12 |
Identity: 37.93% |
Span: 261bp (11.3%) |
Frame: 2 |
| Non-histone chromosomal protein 6 homolog OS=Dictyostelium discoideum GN=nhp6 |
| Match: P40618 |
score: 72.8 |
e-value: 8e-12 |
Identity: 45.21% |
Span: 219bp (9.5%) |
Frame: 2 |
| High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2 |
| Match: Q24537 |
score: 72.8 |
e-value: 8e-12 |
Identity: 41.67% |
Span: 216bp (9.4%) |
Frame: 2 |
| High mobility group protein DSP1 OS=Drosophila melanogaster GN=Dsp1 |
| Match: O54879 |
score: 72 |
e-value: 1e-11 |
Identity: 43.84% |
Span: 219bp (9.5%) |
Frame: 2 |
| High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3 |
| Match: P07746 |
score: 72 |
e-value: 1e-11 |
Identity: 45.21% |
Span: 219bp (9.5%) |
Frame: 2 |
| High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2 |
| Match: P36194 |
score: 71.2 |
e-value: 2e-11 |
Identity: 43.84% |
Span: 219bp (9.5%) |
Frame: 2 |
| High mobility group protein B1 OS=Gallus gallus GN=HMGB1 PE=2 SV=2 |
| Match: P40632 |
score: 70.9 |
e-value: 3e-11 |
Identity: 42.47% |
Span: 213bp (9.3%) |
Frame: 2 |
| High mobility group protein homolog NHP1 OS=Babesia bovis |
| Match: Q32L31 |
score: 70.9 |
e-value: 3e-11 |
Identity: 43.84% |
Span: 219bp (9.5%) |
Frame: 2 |
| High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2 |
| Match: O15347 |
score: 70.5 |
e-value: 4e-11 |
Identity: 42.47% |
Span: 219bp (9.5%) |
Frame: 2 |
| High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4 |
|