| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225440998|ref|XP_002277445.1| |
score: 363 |
e-value: 7e-98 |
Identity: 77.39% |
Span: 888bp (38.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|89111930|ref|NP_001034752.1| |
score: 363 |
e-value: 7e-98 |
Identity: 80.13% |
Span: 891bp (38.4%) |
Frame: 2 |
| hypothetical protein LOC664621 [Mus musculus] >gi13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] |
| Match: gi|255575357|ref|XP_002528581.1| |
score: 358 |
e-value: 1e-96 |
Identity: 77.63% |
Span: 897bp (38.7%) |
Frame: 2 |
| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] >gi223531977|gb|EEF33789.1| U2 snrnp auxiliary ... |
| Match: gi|255573032|ref|XP_002527446.1| |
score: 355 |
e-value: 1e-95 |
Identity: 76.37% |
Span: 861bp (37.1%) |
Frame: 2 |
| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] >gi223533181|gb|EEF34938.1| U2 snrnp auxiliary ... |
| Match: gi|224286856|gb|ACN41131.1| |
score: 337 |
e-value: 3e-90 |
Identity: 71.52% |
Span: 897bp (38.7%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|116788026|gb|ABK24730.1| |
score: 337 |
e-value: 4e-90 |
Identity: 71.02% |
Span: 897bp (38.7%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|224132068|ref|XP_002328177.1| |
score: 324 |
e-value: 3e-86 |
Identity: 93.18% |
Span: 528bp (22.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa] |
| Match: gi|148908155|gb|ABR17193.1| |
score: 324 |
e-value: 3e-86 |
Identity: 62.91% |
Span: 897bp (38.7%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|3850819|emb|CAA77134.1| |
score: 324 |
e-value: 3e-86 |
Identity: 68.09% |
Span: 837bp (36.1%) |
Frame: 2 |
| U2 snRNP auxiliary factor, small subunit [Oryza sativa] |
| Match: gi|270243299|emb|CBI30239.1| |
score: 323 |
e-value: 6e-86 |
Identity: 93.79% |
Span: 531bp (22.9%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ |
score: 322 |
e-value: 1e-85 |
Identity: 66.55% |
Span: 837bp (36.1%) |
Frame: 2 |
| RecName: Full=Splicing factor U2af small subunit A; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor... |
| Match: gi|15217666|ref|NP_174086.1| |
score: 320 |
e-value: 6e-85 |
Identity: 66.33% |
Span: 840bp (36.2%) |
Frame: 2 |
| ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi75336... |
| Match: gi|255539352|ref|XP_002510741.1| |
score: 318 |
e-value: 2e-84 |
Identity: 70.65% |
Span: 828bp (35.7%) |
Frame: 2 |
| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] >gi223551442|gb|EEF52928.1| U2 snrnp auxiliary ... |
| Match: gi|224086130|ref|XP_002307825.1| |
score: 317 |
e-value: 5e-84 |
Identity: 70.14% |
Span: 834bp (36.0%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa] |
| Match: gi|15723291|gb|AAL06331.1|AF409139_1 |
score: 317 |
e-value: 5e-84 |
Identity: 65.99% |
Span: 840bp (36.2%) |
Frame: 2 |
| U2 auxiliary factor small subunit [Arabidopsis thaliana] |
| Match: gi|224061819|ref|XP_002300614.1| |
score: 316 |
e-value: 7e-84 |
Identity: 68.33% |
Span: 834bp (36.0%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa] |
| Match: gi|226502062|ref|NP_001140674.1| |
score: 315 |
e-value: 1e-83 |
Identity: 66.78% |
Span: 837bp (36.1%) |
Frame: 2 |
| hypothetical protein LOC100272749 [Zea mays] >gi194700362|gb|ACF84265.1| unknown [Zea mays] >gi|194700522|gb|ACF84345... |
| Match: gi|195622372|gb|ACG33016.1| |
score: 313 |
e-value: 5e-83 |
Identity: 67.25% |
Span: 837bp (36.1%) |
Frame: 2 |
| splicing factor U2af 38 kDa subunit [Zea mays] >gi195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea m... |
| Match: gi|15239067|ref|NP_199096.1| |
score: 313 |
e-value: 5e-83 |
Identity: 68.33% |
Span: 828bp (35.7%) |
Frame: 2 |
| U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi4257354... |
| Match: gi|224068961|ref|XP_002326241.1| |
score: 312 |
e-value: 1e-82 |
Identity: 91.06% |
Span: 531bp (22.9%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa] |
| Match: gi|225457677|ref|XP_002276502.1| |
score: 311 |
e-value: 3e-82 |
Identity: 67.96% |
Span: 834bp (36.0%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|68036691|gb|AAY84879.1| |
score: 310 |
e-value: 4e-82 |
Identity: 65.29% |
Span: 825bp (35.6%) |
Frame: 2 |
| U2AF small subunit [Triticum aestivum] |
| Match: gi|242058279|ref|XP_002458285.1| |
score: 305 |
e-value: 2e-80 |
Identity: 59.49% |
Span: 834bp (36.0%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor] >gi241930260|gb|EES03405.1| hypothetical protein SORBIDRA... |
| Match: gi|15723293|gb|AAL06332.1|AF409140_1 |
score: 304 |
e-value: 3e-80 |
Identity: 67.26% |
Span: 828bp (35.7%) |
Frame: 2 |
| U2 auxiliary factor small subunit [Arabidopsis thaliana] |
| Match: gi|226492577|ref|NP_001148499.1| |
score: 300 |
e-value: 4e-79 |
Identity: 61.64% |
Span: 834bp (36.0%) |
Frame: 2 |
| splicing factor U2af 38 kDa subunit [Zea mays] >gi195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea m... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At1G27650.1 |
score: 320 |
e-value: 3e-87 |
Identity: 66.33% |
Span: 840bp (36.2%) |
Frame: 2 |
| Symbols: ATU2AF35A | ATU2AF35A; RNA binding | chr1:9615139-9616029 FORWARD |
| Match: At5G42820.1 |
score: 313 |
e-value: 2e-85 |
Identity: 68.33% |
Span: 828bp (35.7%) |
Frame: 2 |
| Symbols: ATU2AF35B | ATU2AF35B; RNA binding | chr5:17187673-17188524 REVERSE |
| Match: At5G42820.2 |
score: 313 |
e-value: 2e-85 |
Identity: 68.33% |
Span: 828bp (35.7%) |
Frame: 2 |
| Symbols: ATU2AF35B | ATU2AF35B; RNA binding | chr5:17187673-17188524 REVERSE |
| Match: At1G27650.2 |
score: 220 |
e-value: 3e-57 |
Identity: 61.07% |
Span: 690bp (29.8%) |
Frame: 2 |
| Symbols: ATU2AF35A | ATU2AF35A | chr1:9615289-9616029 FORWARD |
| Match: At1G10320.1 |
score: 120 |
e-value: 3e-27 |
Identity: 40.72% |
Span: 492bp (21.2%) |
Frame: 2 |
| U2 snRNP auxiliary factor-related | chr1:3384166-3388375 REVERSE |
| Match: At3G44785.1 |
score: 103 |
e-value: 4e-22 |
Identity: 85.19% |
Span: 162bp (7.0%) |
Frame: 2 |
| U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative | chr3:16339208-16339435 REVERSE |
|
| swissprot [blastx] | Showing best 20 hits recorded |
| Match: Q9ZQW8 |
score: 322 |
e-value: 7e-87 |
Identity: 66.55% |
Span: 837bp (36.1%) |
Frame: 2 |
| Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica GN=U2AF35A PE=2 SV=1 |
| Match: Q9S709 |
score: 320 |
e-value: 4e-86 |
Identity: 66.33% |
Span: 840bp (36.2%) |
Frame: 2 |
| Splicing factor U2af small subunit A OS=Arabidopsis thaliana GN=U2AF35A PE=1 SV=1 |
| Match: Q9FMY5 |
score: 313 |
e-value: 3e-84 |
Identity: 68.33% |
Span: 828bp (35.7%) |
Frame: 2 |
| Splicing factor U2af small subunit B OS=Arabidopsis thaliana GN=U2AF35B PE=2 SV=1 |
| Match: Q6AUG0 |
score: 292 |
e-value: 8e-78 |
Identity: 82.39% |
Span: 528bp (22.8%) |
Frame: 2 |
| Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica GN=U2AF35B PE=2 SV=1 |
| Match: Q94535 |
score: 212 |
e-value: 1e-53 |
Identity: 56.11% |
Span: 531bp (22.9%) |
Frame: 2 |
| Splicing factor U2af 38 kDa subunit OS=Drosophila melanogaster GN=U2af38 PE=1 SV=2 |
| Match: Q9D883 |
score: 211 |
e-value: 1e-53 |
Identity: 60.11% |
Span: 531bp (22.9%) |
Frame: 2 |
| Splicing factor U2AF 35 kDa subunit OS=Mus musculus GN=U2af1 PE=2 SV=4 |
| Match: Q01081 |
score: 211 |
e-value: 1e-53 |
Identity: 60.11% |
Span: 531bp (22.9%) |
Frame: 2 |
| Splicing factor U2AF 35 kDa subunit OS=Homo sapiens GN=U2AF1 PE=1 SV=3 |
| Match: A1A4K8 |
score: 211 |
e-value: 1e-53 |
Identity: 60.11% |
Span: 531bp (22.9%) |
Frame: 2 |
| Splicing factor U2AF 35 kDa subunit OS=Bos taurus GN=U2AF1 PE=2 SV=1 |
| Match: Q3T127 |
score: 210 |
e-value: 4e-53 |
Identity: 51.04% |
Span: 720bp (31.0%) |
Frame: 2 |
| Splicing factor U2AF 26 kDa subunit OS=Bos taurus GN=U2AF1L4 PE=2 SV=1 |
| Match: Q7TP17 |
score: 208 |
e-value: 1e-52 |
Identity: 50.62% |
Span: 720bp (31.0%) |
Frame: 2 |
| Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus GN=U2af1l4 PE=2 SV=1 |
| Match: Q8BGJ9 |
score: 208 |
e-value: 1e-52 |
Identity: 50.62% |
Span: 720bp (31.0%) |
Frame: 2 |
| Splicing factor U2AF 26 kDa subunit OS=Mus musculus GN=U2af1l4 PE=1 SV=1 |
| Match: Q8WU68 |
score: 204 |
e-value: 2e-51 |
Identity: 57.87% |
Span: 531bp (22.9%) |
Frame: 2 |
| Splicing factor U2AF 26 kDa subunit OS=Homo sapiens GN=U2AF1L4 PE=1 SV=2 |
| Match: Q09176 |
score: 201 |
e-value: 3e-50 |
Identity: 57.63% |
Span: 531bp (22.9%) |
Frame: 2 |
| Splicing factor U2AF 23 kDa subunit OS=Schizosaccharomyces pombe GN=SPAP8A3.06 PE=1 SV=2 |
| Match: Q15695 |
score: 130 |
e-value: 5e-29 |
Identity: 36.22% |
Span: 741bp (32.0%) |
Frame: 2 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens GN=ZRSR1 PE=2 SV=2 |
| Match: Q62377 |
score: 126 |
e-value: 8e-28 |
Identity: 35.97% |
Span: 738bp (31.8%) |
Frame: 2 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Mus musculus GN=Zrsr2 PE=2 SV=1 |
| Match: Q15696 |
score: 125 |
e-value: 1e-27 |
Identity: 33.98% |
Span: 741bp (32.0%) |
Frame: 2 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens GN=ZRSR2 PE=1 SV=2 |
| Match: Q9SY74 |
score: 120 |
e-value: 3e-26 |
Identity: 40.72% |
Span: 492bp (21.2%) |
Frame: 2 |
| Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana GN=At1g10320 PE=2 SV=2 |
| Match: Q64707 |
score: 110 |
e-value: 4e-23 |
Identity: 38.46% |
Span: 486bp (21.0%) |
Frame: 2 |
| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Mus musculus GN=Zrsr1 PE=2 SV=1 |
| Match: Q6YVX9 |
score: 108 |
e-value: 2e-22 |
Identity: 37.8% |
Span: 483bp (20.8%) |
Frame: 2 |
| Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=Os02g0557500 PE=2 SV=2 |
| Match: Q29350 |
score: 99.8 |
e-value: 8e-20 |
Identity: 60% |
Span: 225bp (9.7%) |
Frame: 2 |
| Splicing factor U2AF 35 kDa subunit (Fragment) OS=Sus scrofa GN=U2AF1 PE=3 SV=3 |
|
