| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225470307|ref|XP_002267296.1| |
score: 284 |
e-value: 4e-74 |
Identity: 53.38% |
Span: 921bp (39.7%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|225426878|ref|XP_002262602.1| |
score: 284 |
e-value: 4e-74 |
Identity: 53.38% |
Span: 921bp (39.7%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270232828|emb|CBI22146.1| |
score: 284 |
e-value: 4e-74 |
Identity: 53.38% |
Span: 921bp (39.7%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224124944|ref|XP_002329852.1| |
score: 278 |
e-value: 2e-72 |
Identity: 59.92% |
Span: 714bp (30.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222871089|gb|EEF08220.1| predicted protein [Populus trichocarpa] |
| Match: gi|225447494|ref|XP_002267309.1| |
score: 278 |
e-value: 1e-73 |
Identity: 77.09% |
Span: 528bp (22.8%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270241243|emb|CBI28469.1| |
score: 278 |
e-value: 1e-73 |
Identity: 77.09% |
Span: 528bp (22.8%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|118487731|gb|ABK95689.1| |
score: 277 |
e-value: 4e-72 |
Identity: 60.42% |
Span: 714bp (30.8%) |
Frame: 2 |
| unknown [Populus trichocarpa] |
| Match: gi|225460542|ref|XP_002277226.1| |
score: 269 |
e-value: 1e-69 |
Identity: 75.6% |
Span: 504bp (21.7%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270229602|emb|CBI18525.1| |
score: 269 |
e-value: 1e-69 |
Identity: 75.6% |
Span: 504bp (21.7%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225461983|ref|XP_002271592.1| |
score: 267 |
e-value: 4e-69 |
Identity: 72.78% |
Span: 528bp (22.8%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147768836|emb|CAN78130.1| hypothetical protein [Vitis vinifera] |
| Match: gi|270257735|emb|CBI39777.1| |
score: 267 |
e-value: 4e-69 |
Identity: 72.78% |
Span: 528bp (22.8%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255563582|ref|XP_002522793.1| |
score: 259 |
e-value: 1e-66 |
Identity: 73.21% |
Span: 504bp (21.7%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] >gi223538031|gb|EEF39644.1| Heterogeneous nuc... |
| Match: gi|255537097|ref|XP_002509615.1| |
score: 258 |
e-value: 2e-66 |
Identity: 49.17% |
Span: 906bp (39.1%) |
Frame: 2 |
| conserved hypothetical protein [Ricinus communis] >gi223549514|gb|EEF51002.1| conserved hypothetical protein [Ricinus... |
| Match: gi|224061254|ref|XP_002300392.1| |
score: 258 |
e-value: 3e-66 |
Identity: 71.27% |
Span: 528bp (22.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222847650|gb|EEE85197.1| predicted protein [Populus trichocarpa] |
| Match: gi|224055563|ref|XP_002298541.1| |
score: 256 |
e-value: 7e-66 |
Identity: 72.29% |
Span: 498bp (21.5%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa] |
| Match: gi|255636483|gb|ACU18580.1| |
score: 252 |
e-value: 1e-64 |
Identity: 69.64% |
Span: 504bp (21.7%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|147789024|emb|CAN75779.1| |
score: 252 |
e-value: 1e-64 |
Identity: 73.91% |
Span: 483bp (20.8%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|30682553|ref|NP_683559.2| |
score: 251 |
e-value: 2e-64 |
Identity: 69.23% |
Span: 528bp (22.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi11994764|dbj|BAB03120.1| unnamed protein pro... |
| Match: gi|225452334|ref|XP_002273564.1| |
score: 251 |
e-value: 4e-64 |
Identity: 67.86% |
Span: 504bp (21.7%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224074713|ref|XP_002304437.1| |
score: 251 |
e-value: 2e-64 |
Identity: 59.23% |
Span: 777bp (33.5%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222841869|gb|EEE79416.1| predicted protein [Populus trichocarpa] |
| Match: gi|270251489|emb|CBI34862.1| |
score: 251 |
e-value: 4e-64 |
Identity: 67.86% |
Span: 504bp (21.7%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|30682550|ref|NP_851001.1| |
score: 249 |
e-value: 1e-63 |
Identity: 68.13% |
Span: 528bp (22.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi17065240|gb|AAL32774.1| Unknown protein [Ara... |
| Match: gi|110738919|dbj|BAF01381.1| |
score: 249 |
e-value: 1e-63 |
Identity: 68.13% |
Span: 528bp (22.8%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|270241243|emb|CBI28469.1| |
score: 23.5 |
e-value: 1e-73 |
Identity: 69.23% |
Span: 39bp (1.7%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225447494|ref|XP_002267309.1| |
score: 23.5 |
e-value: 1e-73 |
Identity: 69.23% |
Span: 39bp (1.7%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
|
| 339 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At3G13224.2 |
score: 251 |
e-value: 1e-66 |
Identity: 69.23% |
Span: 528bp (22.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At3G13224.1 |
score: 249 |
e-value: 7e-66 |
Identity: 68.13% |
Span: 528bp (22.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At5G40490.1 |
score: 235 |
e-value: 1e-61 |
Identity: 63.22% |
Span: 522bp (22.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At4G22740.2 |
score: 204 |
e-value: 1e-52 |
Identity: 44.48% |
Span: 801bp (34.5%) |
Frame: 2 |
| glycine-rich protein | chr4:11944061-11945576 REVERSE |
| Match: At4G22740.1 |
score: 204 |
e-value: 1e-52 |
Identity: 44.48% |
Span: 801bp (34.5%) |
Frame: 2 |
| glycine-rich protein | chr4:11944061-11945576 REVERSE |
| Match: At1G17640.1 |
score: 188 |
e-value: 1e-47 |
Identity: 51.79% |
Span: 495bp (21.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
| Match: At2G45380.1 |
score: 167 |
e-value: 3e-41 |
Identity: 44.71% |
Span: 624bp (26.9%) |
Frame: 2 |
| similar to calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G34070.1); similar to Os08g0117900 [Oryza sativa (jap... |
| Match: At4G26650.2 |
score: 157 |
e-value: 3e-38 |
Identity: 42.54% |
Span: 486bp (20.9%) |
Frame: 2 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At4G26650.1 |
score: 157 |
e-value: 3e-38 |
Identity: 42.54% |
Span: 486bp (20.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At3G07810.2 |
score: 154 |
e-value: 2e-37 |
Identity: 42.05% |
Span: 486bp (20.9%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 154 |
e-value: 2e-37 |
Identity: 42.05% |
Span: 486bp (20.9%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At5G55550.2 |
score: 154 |
e-value: 2e-37 |
Identity: 43.56% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.3 |
score: 154 |
e-value: 2e-37 |
Identity: 43.56% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.1 |
score: 154 |
e-value: 2e-37 |
Identity: 43.56% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At4G14300.1 |
score: 152 |
e-value: 9e-37 |
Identity: 39.89% |
Span: 486bp (20.9%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At5G47620.2 |
score: 148 |
e-value: 2e-35 |
Identity: 41.62% |
Span: 483bp (20.8%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At5G55550.1 |
score: 85.9 |
e-value: 1e-16 |
Identity: 49.41% |
Span: 252bp (10.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At5G55550.2 |
score: 85.9 |
e-value: 1e-16 |
Identity: 49.41% |
Span: 252bp (10.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.3 |
score: 85.9 |
e-value: 1e-16 |
Identity: 49.41% |
Span: 252bp (10.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At4G26650.2 |
score: 85.9 |
e-value: 1e-16 |
Identity: 39.17% |
Span: 345bp (14.9%) |
Frame: 2 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At4G26650.1 |
score: 85.9 |
e-value: 1e-16 |
Identity: 39.17% |
Span: 345bp (14.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At4G14300.1 |
score: 81.6 |
e-value: 2e-15 |
Identity: 50% |
Span: 231bp (10.0%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD |
| Match: At3G07810.2 |
score: 80.9 |
e-value: 3e-15 |
Identity: 43.43% |
Span: 276bp (11.9%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 80.9 |
e-value: 3e-15 |
Identity: 43.43% |
Span: 276bp (11.9%) |
Frame: 2 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At1G17640.1 |
score: 77.8 |
e-value: 3e-14 |
Identity: 39.62% |
Span: 312bp (13.4%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
|
| 35 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: O94432 |
score: 142 |
e-value: 8e-33 |
Identity: 43.62% |
Span: 447bp (19.3%) |
Frame: 2 |
| Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1 |
| Match: P48809 |
score: 142 |
e-value: 8e-33 |
Identity: 42.94% |
Span: 486bp (20.9%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2 |
| Match: Q96EP5 |
score: 136 |
e-value: 8e-31 |
Identity: 41.81% |
Span: 486bp (20.9%) |
Frame: 2 |
| DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 |
| Match: Q9JII5 |
score: 135 |
e-value: 1e-30 |
Identity: 41.81% |
Span: 486bp (20.9%) |
Frame: 2 |
| DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2 |
| Match: Q98SJ2 |
score: 135 |
e-value: 2e-30 |
Identity: 40.11% |
Span: 498bp (21.5%) |
Frame: 2 |
| DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1 |
| Match: Q99383 |
score: 132 |
e-value: 1e-29 |
Identity: 41.61% |
Span: 483bp (20.8%) |
Frame: 2 |
| Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1 |
| Match: Q920Q6 |
score: 131 |
e-value: 2e-29 |
Identity: 41.22% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1 |
| Match: Q96DH6 |
score: 131 |
e-value: 2e-29 |
Identity: 41.22% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1 |
| Match: Q9VVE5 |
score: 129 |
e-value: 9e-29 |
Identity: 41.22% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=1 SV=3 |
| Match: Q61474 |
score: 125 |
e-value: 2e-27 |
Identity: 39.19% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1 |
| Match: Q8K3P4 |
score: 125 |
e-value: 2e-27 |
Identity: 39.19% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1 |
| Match: O43347 |
score: 124 |
e-value: 2e-27 |
Identity: 39.19% |
Span: 441bp (19.0%) |
Frame: 2 |
| RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1 |
| Match: Q22037 |
score: 124 |
e-value: 3e-27 |
Identity: 38.06% |
Span: 456bp (19.7%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis elegans GN=hrp-1 PE=1 SV=1 |
| Match: P21522 |
score: 121 |
e-value: 3e-26 |
Identity: 36.36% |
Span: 519bp (22.4%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana GN=HNRNP PE=2 SV=1 |
| Match: Q5RBU8 |
score: 117 |
e-value: 5e-25 |
Identity: 38.41% |
Span: 444bp (19.1%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abelii GN=HNRNPA2B1 PE=2 SV=1 |
| Match: Q2HJ60 |
score: 117 |
e-value: 5e-25 |
Identity: 38.41% |
Span: 444bp (19.1%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus GN=HNRNPA2B1 PE=2 SV=1 |
| Match: P22626 |
score: 117 |
e-value: 5e-25 |
Identity: 38.41% |
Span: 444bp (19.1%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2 |
| Match: O88569 |
score: 117 |
e-value: 5e-25 |
Identity: 38.41% |
Span: 444bp (19.1%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus GN=Hnrnpa2b1 PE=1 SV=2 |
| Match: A7VJC2 |
score: 116 |
e-value: 6e-25 |
Identity: 38.41% |
Span: 444bp (19.1%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus GN=Hnrnpa2b1 PE=1 SV=1 |
| Match: O94432 |
score: 80.9 |
e-value: 4e-14 |
Identity: 41.86% |
Span: 252bp (10.9%) |
Frame: 2 |
| Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1 |
| Match: P21522 |
score: 72.8 |
e-value: 1e-11 |
Identity: 36.05% |
Span: 255bp (11.0%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana GN=HNRNP PE=2 SV=1 |
| Match: Q99383 |
score: 71.2 |
e-value: 3e-11 |
Identity: 40.51% |
Span: 234bp (10.1%) |
Frame: 2 |
| Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1 |
| Match: Q22037 |
score: 70.5 |
e-value: 5e-11 |
Identity: 44% |
Span: 225bp (9.7%) |
Frame: 2 |
| Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis elegans GN=hrp-1 PE=1 SV=1 |
| Match: Q96EP5 |
score: 70.1 |
e-value: 7e-11 |
Identity: 38.3% |
Span: 279bp (12.0%) |
Frame: 2 |
| DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 |
| Match: Q9JII5 |
score: 70.1 |
e-value: 7e-11 |
Identity: 38.3% |
Span: 279bp (12.0%) |
Frame: 2 |
| DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2 |
|
| 86 lower scoring hits censored -- only 25 best hits are stored. |
