| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270251729|emb|CBI35100.1| |
score: 149 |
e-value: 8e-35 |
Identity: 85.9% |
Span: 234bp (97.5%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225465805|ref|XP_002263835.1| |
score: 149 |
e-value: 8e-35 |
Identity: 85.9% |
Span: 234bp (97.5%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|255578257|ref|XP_002529996.1| |
score: 142 |
e-value: 1e-32 |
Identity: 85.71% |
Span: 231bp (96.2%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit, putative [Ricinus communis] >gi223530519|gb|EEF32401.1| DNA-directed RNA polym... |
| Match: gi|224053240|ref|XP_002297732.1| |
score: 137 |
e-value: 5e-31 |
Identity: 82.89% |
Span: 228bp (95.0%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222844990|gb|EEE82537.1| predicted protein [Populus trichocarpa] |
| Match: gi|9972352|gb|AAG10602.1|AC008030_2 |
score: 132 |
e-value: 2e-29 |
Identity: 75.64% |
Span: 234bp (97.5%) |
Frame: 2 |
| Similar to DNA-directed RNA polymerase subunit [Arabidopsis thaliana] |
| Match: gi|12324162|gb|AAG52049.1|AC022455_3 |
score: 132 |
e-value: 2e-29 |
Identity: 75.64% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit, putative; 8546-1198 [Arabidopsis thaliana] |
| Match: gi|79356046|ref|NP_564341.2| |
score: 132 |
e-value: 2e-29 |
Identity: 75.64% |
Span: 234bp (97.5%) |
Frame: 2 |
| NRPA2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding [Arabidopsis thaliana] |
| Match: gi|222613075|gb|EEE51207.1| |
score: 125 |
e-value: 2e-27 |
Identity: 72.37% |
Span: 228bp (95.0%) |
Frame: 2 |
| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group] |
| Match: gi|218184815|gb|EEC67242.1| |
score: 125 |
e-value: 2e-27 |
Identity: 72.37% |
Span: 228bp (95.0%) |
Frame: 2 |
| hypothetical protein OsI_34174 [Oryza sativa Indica Group] |
| Match: gi|115482718|ref|NP_001064952.1| |
score: 125 |
e-value: 2e-27 |
Identity: 72.37% |
Span: 228bp (95.0%) |
Frame: 2 |
| Os10g0495600 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|110289329|gb|ABB47823.2| |
score: 125 |
e-value: 2e-27 |
Identity: 72.37% |
Span: 228bp (95.0%) |
Frame: 2 |
| DNA-directed RNA polymerase, beta subunit family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22128702|gb|AAM92814.1| |
score: 125 |
e-value: 2e-27 |
Identity: 72.37% |
Span: 228bp (95.0%) |
Frame: 2 |
| putative DNA-directed RNA polymerase I subunit, 5'-partial [Oryza sativa Japonica Group] |
| Match: gi|168042961|ref|XP_001773955.1| |
score: 115 |
e-value: 2e-24 |
Identity: 64.1% |
Span: 234bp (97.5%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162674799|gb|EDQ61303.1| predicted protein [Physcomitrella... |
| Match: gi|255070151|ref|XP_002507157.1| |
score: 99 |
e-value: 2e-19 |
Identity: 64% |
Span: 225bp (93.8%) |
Frame: 2 |
| predicted protein [Micromonas sp. RCC299] >gi226522432|gb|ACO68415.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|159485654|ref|XP_001700859.1| |
score: 98.6 |
e-value: 2e-19 |
Identity: 60.26% |
Span: 234bp (97.5%) |
Frame: 2 |
| hypothetical protein CHLREDRAFT_113199 [Chlamydomonas reinhardtii] >gi158281358|gb|EDP07113.1| predicted protein [Chl... |
| Match: gi|47209534|emb|CAF89806.1| |
score: 98.2 |
e-value: 3e-19 |
Identity: 60.26% |
Span: 234bp (97.5%) |
Frame: 2 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|147899772|ref|NP_001080005.1| |
score: 97.4 |
e-value: 5e-19 |
Identity: 60.49% |
Span: 234bp (97.5%) |
Frame: 2 |
| polymerase (RNA) I polypeptide B, 128kDa [Xenopus laevis] >gi37589362|gb|AAH59304.1| MGC68946 protein [Xenopus laevis] |
| Match: gi|126303601|ref|XP_001373893.1| |
score: 95.1 |
e-value: 2e-18 |
Identity: 58.75% |
Span: 234bp (97.5%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Monodelphis domestica] |
| Match: gi|220679440|emb|CAX13206.1| |
score: 94.4 |
e-value: 4e-18 |
Identity: 81.63% |
Span: 147bp (61.3%) |
Frame: 2 |
| novel protein (zgc:66298) [Danio rerio] |
| Match: gi|124504400|gb|AAI28811.1| |
score: 94.4 |
e-value: 4e-18 |
Identity: 81.63% |
Span: 147bp (61.3%) |
Frame: 2 |
| Zgc:66298 [Danio rerio] |
| Match: gi|76253769|ref|NP_956812.2| |
score: 94.4 |
e-value: 4e-18 |
Identity: 81.63% |
Span: 147bp (61.3%) |
Frame: 2 |
| RNA polymerase I polypeptide B [Danio rerio] >gi66911319|gb|AAH97040.1| Zgc:66298 [Danio rerio] >gi|182890886|gb|AAI6... |
| Match: gi|149727186|ref|XP_001495511.1| |
score: 94 |
e-value: 5e-18 |
Identity: 55.13% |
Span: 234bp (97.5%) |
Frame: 2 |
| PREDICTED: similar to RNA polymerase I polypeptide B isoform 1 [Equus caballus] |
| Match: gi|149639737|ref|XP_001515678.1| |
score: 94 |
e-value: 5e-18 |
Identity: 81.63% |
Span: 147bp (61.3%) |
Frame: 2 |
| PREDICTED: similar to RNA polymerase I polypeptide B [Ornithorhynchus anatinus] |
| Match: gi|281347779|gb|EFB23363.1| |
score: 93.6 |
e-value: 7e-18 |
Identity: 55.13% |
Span: 234bp (97.5%) |
Frame: 2 |
| hypothetical protein PANDA_016030 [Ailuropoda melanoleuca] |
| Match: gi|221044264|dbj|BAH13809.1| |
score: 92.8 |
e-value: 1e-17 |
Identity: 56.41% |
Span: 234bp (97.5%) |
Frame: 2 |
| unnamed protein product [Homo sapiens] |
|
| 159 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1G29940.1 |
score: 132 |
e-value: 6e-32 |
Identity: 75.64% |
Span: 234bp (97.5%) |
Frame: 2 |
| Symbols: NRPA2 | NRPA2 (nuclear RNA polymerase A 2); DNA-directed RNA polymerase | chr1:10479306-10486654 REVERSE |
|
| swissprot [blastx] | Showing best 11 hits recorded |
| Match: O54888 |
score: 92.8 |
e-value: 6e-19 |
Identity: 57.69% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Rattus norvegicus GN=Polr1b PE=1 SV=1 |
| Match: Q5REE8 |
score: 92.8 |
e-value: 6e-19 |
Identity: 56.41% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Pongo abelii GN=POLR1B PE=2 SV=1 |
| Match: Q9H9Y6 |
score: 92.8 |
e-value: 6e-19 |
Identity: 56.41% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Homo sapiens GN=POLR1B PE=1 SV=2 |
| Match: P70700 |
score: 90.9 |
e-value: 2e-18 |
Identity: 64.91% |
Span: 171bp (71.2%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Mus musculus GN=Polr1b PE=2 SV=1 |
| Match: Q9P7X8 |
score: 88.6 |
e-value: 1e-17 |
Identity: 49.37% |
Span: 237bp (98.8%) |
Frame: 2 |
| Probable DNA-directed RNA polymerase I subunit RPA2 OS=Schizosaccharomyces pombe GN=rpa2 PE=2 SV=2 |
| Match: P22138 |
score: 87.4 |
e-value: 2e-17 |
Identity: 51.28% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Saccharomyces cerevisiae GN=RPA2 PE=1 SV=1 |
| Match: O74633 |
score: 85.9 |
e-value: 7e-17 |
Identity: 76.6% |
Span: 141bp (58.8%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Neurospora crassa GN=acr-2 PE=1 SV=2 |
| Match: Q75DS1 |
score: 85.9 |
e-value: 7e-17 |
Identity: 73.47% |
Span: 147bp (61.3%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Ashbya gossypii GN=RPA2 PE=3 SV=1 |
| Match: Q54BM1 |
score: 85.5 |
e-value: 9e-17 |
Identity: 51.28% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit rpa2 OS=Dictyostelium discoideum GN=polr1b PE=3 SV=1 |
| Match: P28365 |
score: 82.4 |
e-value: 8e-16 |
Identity: 77.78% |
Span: 135bp (56.2%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Euplotes octocarinatus GN=RPA2 PE=3 SV=2 |
| Match: P20028 |
score: 82.4 |
e-value: 8e-16 |
Identity: 50% |
Span: 234bp (97.5%) |
Frame: 2 |
| DNA-directed RNA polymerase I subunit RPA2 OS=Drosophila melanogaster GN=RpI135 PE=2 SV=2 |
|
