| genbank/nr [blastx] | Showing best 32 hits recorded |
| Match: gi|48210057|gb|AAT40556.1| |
score: 78.57 |
e-value: 3.1e-14 |
Identity: 75.56% |
Span: 135bp (55.1%) |
Frame: 3 |
| gi|48210057|gb|AAT40556.1| hypothetical protein PGEC542.21 [Solanum demissum] |
| Match: gi|38346464|emb|CAD39568.2| |
score: 56.61 |
e-value: 1.3e-07 |
Identity: 40.26% |
Span: 216bp (88.2%) |
Frame: 3 |
| gi|38346464|emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345965|emb|CAE04048.2| |
score: 53.91 |
e-value: 8.2e-07 |
Identity: 42.86% |
Span: 180bp (73.5%) |
Frame: 3 |
| gi|38345965|emb|CAE04048.2| OSJNBb0062B06.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|29126371|gb|AAO66563.1| |
score: 49.68 |
e-value: 1.6e-05 |
Identity: 42.86% |
Span: 183bp (74.7%) |
Frame: 3 |
| gi|29126371|gb|AAO66563.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37534230|ref|NP_921417.1| |
score: 49.29 |
e-value: 2e-05 |
Identity: 43.55% |
Span: 183bp (74.7%) |
Frame: 3 |
| gi|37534230|ref|NP_921417.1| contains similarity to non-LTR reverse transcriptase [Oryza sativa (japonica cultivar-gr... |
| Match: gi|38346584|emb|CAE04648.2| |
score: 48.14 |
e-value: 4.5e-05 |
Identity: 37.1% |
Span: 183bp (74.7%) |
Frame: 3 |
| gi|38346584|emb|CAE04648.2| OSJNBa0061G20.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21740636|emb|CAD40197.1| |
score: 47.37 |
e-value: 7.7e-05 |
Identity: 41.27% |
Span: 183bp (74.7%) |
Frame: 3 |
| gi|21740636|emb|CAD40197.1| OSJNBb0043H09.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|14702030|gb|AAK72280.1| |
score: 46.98 |
e-value: 0.0001 |
Identity: 39.34% |
Span: 180bp (73.5%) |
Frame: 3 |
| gi|14702030|gb|AAK72280.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31044099|dbj|BAC15618.2| |
score: 46.59 |
e-value: 0.00013 |
Identity: 40.32% |
Span: 183bp (74.7%) |
Frame: 3 |
| gi|31044099|dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34904884|ref|NP_913789.1| |
score: 46.59 |
e-value: 0.00013 |
Identity: 35.06% |
Span: 216bp (88.2%) |
Frame: 3 |
| gi|34904884|ref|NP_913789.1| similar to reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|24417209|db... |
| Match: gi|37718856|gb|AAR01727.1| |
score: 45.44 |
e-value: 0.00029 |
Identity: 48.78% |
Span: 123bp (50.2%) |
Frame: 3 |
| gi|37718856|gb|AAR01727.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|39546208|emb|CAE04633.3| |
score: 45.05 |
e-value: 0.00038 |
Identity: 33.33% |
Span: 180bp (73.5%) |
Frame: 3 |
| gi|39546208|emb|CAE04633.3| OSJNBa0028I23.15 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34906774|ref|NP_914734.1| |
score: 44.67 |
e-value: 0.0005 |
Identity: 40% |
Span: 162bp (66.1%) |
Frame: 3 |
| gi|34906774|ref|NP_914734.1| gag-pol polyprotein -like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411313|pir||C84487 |
score: 43.51 |
e-value: 0.001 |
Identity: 32.14% |
Span: 168bp (68.6%) |
Frame: 3 |
| gi|25411313|pir||C84487 hypothetical protein At2g07650 [imported] - Arabidopsis thaliana gi|5001454|gb|AAD37021.1| pu... |
| Match: gi|7485171|pir||G71420 |
score: 43.51 |
e-value: 0.001 |
Identity: 33.33% |
Span: 180bp (73.5%) |
Frame: 3 |
| gi|7485171|pir||G71420 hypothetical protein - Arabidopsis thaliana gi|2244915|emb|CAB10337.1| reverse transcriptase l... |
| Match: gi|8096424|dbj|BAA95894.1| |
score: 43.13 |
e-value: 0.001 |
Identity: 33.93% |
Span: 168bp (68.6%) |
Frame: 3 |
| gi|8096424|dbj|BAA95894.1| Similar to Arabidopsis thaliana chromosome2 BAC F13B15; putative non-LTR retroelement reve... |
| Match: gi|37531298|ref|NP_919951.1| |
score: 42.36 |
e-value: 0.002 |
Identity: 32.14% |
Span: 168bp (68.6%) |
Frame: 3 |
| gi|37531298|ref|NP_919951.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|22655797|gb|AAN04214.1... |
| Match: gi|22208464|gb|AAM94293.1| |
score: 42.36 |
e-value: 0.002 |
Identity: 37.74% |
Span: 156bp (63.7%) |
Frame: 3 |
| gi|22208464|gb|AAM94293.1| putative reverse transcriptase [Sorghum bicolor] |
| Match: gi|25408124|pir||C84716 |
score: 42.36 |
e-value: 0.002 |
Identity: 31.67% |
Span: 180bp (73.5%) |
Frame: 3 |
| gi|25408124|pir||C84716 hypothetical protein At2g31080 [imported] - Arabidopsis thaliana gi|3746069|gb|AAC63844.1| pu... |
| Match: gi|29124122|gb|AAO65863.1| |
score: 42.36 |
e-value: 0.002 |
Identity: 46.34% |
Span: 123bp (50.2%) |
Frame: 3 |
| gi|29124122|gb|AAO65863.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34901574|ref|NP_912133.1| |
score: 41.97 |
e-value: 0.003 |
Identity: 44.19% |
Span: 129bp (52.7%) |
Frame: 3 |
| gi|34901574|ref|NP_912133.1| P0571D04.1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34902484|ref|NP_912588.1| |
score: 41.97 |
e-value: 0.003 |
Identity: 28.77% |
Span: 204bp (83.3%) |
Frame: 3 |
| gi|34902484|ref|NP_912588.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|37534700|ref|NP_921652.1| |
score: 41.97 |
e-value: 0.003 |
Identity: 29.73% |
Span: 207bp (84.5%) |
Frame: 3 |
| gi|37534700|ref|NP_921652.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|37530474|ref|NP_919539.1| |
score: 41.59 |
e-value: 0.004 |
Identity: 54.05% |
Span: 111bp (45.3%) |
Frame: 3 |
| gi|37530474|ref|NP_919539.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19920089|gb|AAM08521.1... |
| Match: gi|37535220|ref|NP_921912.1| |
score: 41.2 |
e-value: 0.006 |
Identity: 38% |
Span: 147bp (60.0%) |
Frame: 3 |
| gi|37535220|ref|NP_921912.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|13489171|gb|A... |
| Match: gi|37534640|ref|NP_921622.1| |
score: 41.2 |
e-value: 0.006 |
Identity: 48.65% |
Span: 111bp (45.3%) |
Frame: 3 |
| gi|37534640|ref|NP_921622.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|28376701|gb|AAO41131.1| |
score: 41.2 |
e-value: 0.006 |
Identity: 51.43% |
Span: 105bp (42.9%) |
Frame: 3 |
| gi|28376701|gb|AAO41131.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38347191|emb|CAE02411.2| |
score: 41.2 |
e-value: 0.006 |
Identity: 35.71% |
Span: 159bp (64.9%) |
Frame: 3 |
| OSJNBa0024J22.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32489540|emb|CAE03781.1| |
score: 41.2 |
e-value: 0.006 |
Identity: 39.29% |
Span: 159bp (64.9%) |
Frame: 3 |
| gi|32489540|emb|CAE03781.1| OSJNBa0063G07.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345754|emb|CAE03482.2| |
score: 40.82 |
e-value: 0.007 |
Identity: 46.34% |
Span: 123bp (50.2%) |
Frame: 3 |
| gi|38345754|emb|CAE03482.2| OSJNBa0065O17.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34906350|ref|NP_914522.1| |
score: 40.82 |
e-value: 0.007 |
Identity: 31.67% |
Span: 180bp (73.5%) |
Frame: 3 |
| gi|34906350|ref|NP_914522.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|9558497|dbj|BAB03416... |
| Match: gi|21741977|emb|CAD41785.1| |
score: 40.43 |
e-value: 0.009 |
Identity: 35.71% |
Span: 168bp (68.6%) |
Frame: 3 |
| gi|21741977|emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa (japonica cultivar-group)] gi|38346911|emb|CAE03883.2| OSJN... |
|
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At5g36905.1 |
score: 38.12 |
e-value: 0.001 |
Identity: 32.08% |
Span: 159bp (64.9%) |
Frame: 3 |
| At5g36905.1 68412.m03970 RNase H domain-containing protein low similarity to reverse transcriptase [Arabidopsis thali... |
| Match: At3g24255.1 |
score: 36.96 |
e-value: 0.002 |
Identity: 32.14% |
Span: 168bp (68.6%) |
Frame: 3 |
| At3g24255.1 68410.m02779 hypothetical protein similar to putative non-LTR retroelement reverse transcriptase GB:AAC63... |
|
