| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225458678|ref|XP_002284923.1| |
score: 938 |
e-value: 0 |
Identity: 83.33% |
Span: 1830bp (74.0%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147773643|emb|CAN76464.1| hypothetical protein [Vitis vinifera] |
| Match: gi|255538240|ref|XP_002510185.1| |
score: 929 |
e-value: 0 |
Identity: 79.24% |
Span: 1959bp (79.2%) |
Frame: 1 |
| polyadenylate-binding protein, putative [Ricinus communis] >gi223550886|gb|EEF52372.1| polyadenylate-binding protein,... |
| Match: gi|224137600|ref|XP_002327166.1| |
score: 927 |
e-value: 0 |
Identity: 83.09% |
Span: 1839bp (74.4%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa] |
| Match: gi|13560783|gb|AAK30205.1|AF349964_1 |
score: 924 |
e-value: 0 |
Identity: 83.36% |
Span: 1821bp (73.6%) |
Frame: 1 |
| poly(A)-binding protein [Daucus carota] |
| Match: gi|224063493|ref|XP_002301171.1| |
score: 919 |
e-value: 0 |
Identity: 82.9% |
Span: 1836bp (74.2%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa] |
| Match: gi|225438781|ref|XP_002283105.1| |
score: 899 |
e-value: 0 |
Identity: 78.57% |
Span: 1842bp (74.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270232063|emb|CBI21386.1| unnamed protein product [Vitis vinifera] |
| Match: gi|255555393|ref|XP_002518733.1| |
score: 896 |
e-value: 0 |
Identity: 78.52% |
Span: 1830bp (74.0%) |
Frame: 1 |
| polyadenylate-binding protein, putative [Ricinus communis] >gi223542114|gb|EEF43658.1| polyadenylate-binding protein,... |
| Match: gi|270252878|emb|CBI19489.1| |
score: 896 |
e-value: 0 |
Identity: 80.88% |
Span: 1830bp (74.0%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224060514|ref|XP_002300227.1| |
score: 894 |
e-value: 0 |
Identity: 78.1% |
Span: 1836bp (74.2%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa] |
| Match: gi|225428865|ref|XP_002285190.1| |
score: 880 |
e-value: 0 |
Identity: 75.85% |
Span: 1842bp (74.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147839912|emb|CAN65906.1| hypothetical protein [Vitis vinifera] |
| Match: gi|7528270|gb|AAF63202.1|AF240679_1 |
score: 875 |
e-value: 0 |
Identity: 76.79% |
Span: 1845bp (74.6%) |
Frame: 1 |
| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|7673355|gb|AAF66823.1|AF190655_1 |
score: 872 |
e-value: 0 |
Identity: 72.82% |
Span: 1959bp (79.2%) |
Frame: 1 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|115477976|ref|NP_001062583.1| |
score: 838 |
e-value: 0 |
Identity: 71.85% |
Span: 1812bp (73.3%) |
Frame: 1 |
| Os09g0115400 [Oryza sativa (japonica cultivar-group)] >gi46389987|dbj|BAD16229.1| putative poly(A)-binding protein [O... |
| Match: gi|270246004|emb|CBI32381.1| |
score: 819 |
e-value: 0 |
Identity: 71.64% |
Span: 1842bp (74.5%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|18402769|ref|NP_564554.1| |
score: 817 |
e-value: 0 |
Identity: 70.02% |
Span: 1830bp (74.0%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|115475838|ref|NP_001061515.1| |
score: 812 |
e-value: 0 |
Identity: 70.68% |
Span: 1836bp (74.2%) |
Frame: 1 |
| Os08g0314800 [Oryza sativa (japonica cultivar-group)] >gi35215045|dbj|BAC92404.1| putative polyadenylate-binding prot... |
| Match: gi|1737492|gb|AAB38974.1| |
score: 808 |
e-value: 0 |
Identity: 69.43% |
Span: 1845bp (74.6%) |
Frame: 1 |
| poly(A)-binding protein [Triticum aestivum] |
| Match: gi|240256156|ref|NP_195137.5| |
score: 806 |
e-value: 0 |
Identity: 67.85% |
Span: 1929bp (78.0%) |
Frame: 1 |
| PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi1171978|sp|P42731.1|P... |
| Match: gi|19347816|gb|AAL86321.1| |
score: 804 |
e-value: 0 |
Identity: 69.95% |
Span: 1815bp (73.4%) |
Frame: 1 |
| putative poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|224105583|ref|XP_002313862.1| |
score: 798 |
e-value: 0 |
Identity: 72.67% |
Span: 1836bp (74.2%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa] |
| Match: gi|115459296|ref|NP_001053248.1| |
score: 791 |
e-value: 0 |
Identity: 71.88% |
Span: 1800bp (72.8%) |
Frame: 1 |
| Os04g0504800 [Oryza sativa (japonica cultivar-group)] >gi32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (jap... |
| Match: gi|218195166|gb|EEC77593.1| |
score: 790 |
e-value: 0 |
Identity: 71.71% |
Span: 1800bp (72.8%) |
Frame: 1 |
| hypothetical protein OsI_16552 [Oryza sativa Indica Group] |
| Match: gi|226496737|ref|NP_001151785.1| |
score: 775 |
e-value: 0 |
Identity: 68.89% |
Span: 1830bp (74.0%) |
Frame: 1 |
| LOC100285420 [Zea mays] >gi195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays] |
| Match: gi|70663933|emb|CAE02947.3| |
score: 775 |
e-value: 0 |
Identity: 71.05% |
Span: 1800bp (72.8%) |
Frame: 1 |
| OSJNBa0014K14.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|270246004|emb|CBI32381.1| |
score: 256 |
e-value: 9e-66 |
Identity: 37.88% |
Span: 1137bp (46.0%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
|
| 402 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At1G49760.1 |
score: 817 |
e-value: 0 |
Identity: 70.02% |
Span: 1830bp (74.0%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G23350.1 |
score: 754 |
e-value: 0 |
Identity: 66.17% |
Span: 1821bp (73.6%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G22760.1 |
score: 602 |
e-value: 4e-172 |
Identity: 55.68% |
Span: 1794bp (72.5%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At1G71770.1 |
score: 594 |
e-value: 9e-170 |
Identity: 54.9% |
Span: 1830bp (74.0%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At4G34110.1 |
score: 557 |
e-value: 1e-158 |
Identity: 67.92% |
Span: 1344bp (54.3%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G34140.1 |
score: 343 |
e-value: 4e-94 |
Identity: 48.59% |
Span: 1149bp (46.5%) |
Frame: 1 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At2G36660.1 |
score: 338 |
e-value: 9e-93 |
Identity: 46.03% |
Span: 1134bp (45.9%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At3G16380.1 |
score: 312 |
e-value: 5e-85 |
Identity: 43.91% |
Span: 1167bp (47.2%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At2G36660.1 |
score: 178 |
e-value: 2e-44 |
Identity: 38.06% |
Span: 861bp (34.8%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At4G34110.1 |
score: 150 |
e-value: 4e-36 |
Identity: 37.1% |
Span: 627bp (25.4%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At2G18510.1 |
score: 119 |
e-value: 1e-26 |
Identity: 37.5% |
Span: 522bp (21.1%) |
Frame: 1 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At4G34110.1 |
score: 111 |
e-value: 2e-24 |
Identity: 35.94% |
Span: 528bp (21.4%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G47500.1 |
score: 106 |
e-value: 8e-23 |
Identity: 29.78% |
Span: 774bp (31.3%) |
Frame: 1 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At1G34140.1 |
score: 106 |
e-value: 8e-23 |
Identity: 32.32% |
Span: 543bp (22.0%) |
Frame: 1 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At3G16380.1 |
score: 103 |
e-value: 5e-22 |
Identity: 35.48% |
Span: 513bp (20.7%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G47490.1 |
score: 103 |
e-value: 4e-22 |
Identity: 29.41% |
Span: 774bp (31.3%) |
Frame: 1 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G11650.2 |
score: 103 |
e-value: 5e-22 |
Identity: 27.59% |
Span: 723bp (29.2%) |
Frame: 1 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At3G19130.1 |
score: 103 |
e-value: 4e-22 |
Identity: 27.8% |
Span: 723bp (29.2%) |
Frame: 1 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At2G36660.1 |
score: 102 |
e-value: 8e-22 |
Identity: 29.81% |
Span: 576bp (23.3%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At1G47490.1 |
score: 99.4 |
e-value: 9e-21 |
Identity: 27.01% |
Span: 855bp (34.6%) |
Frame: 1 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G47500.1 |
score: 95.5 |
e-value: 1e-19 |
Identity: 26.05% |
Span: 855bp (34.6%) |
Frame: 1 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At3G19130.1 |
score: 91.3 |
e-value: 3e-18 |
Identity: 25.09% |
Span: 774bp (31.3%) |
Frame: 1 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At1G11650.2 |
score: 82 |
e-value: 2e-15 |
Identity: 24% |
Span: 990bp (40.0%) |
Frame: 1 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At2G18510.1 |
score: 79 |
e-value: 1e-14 |
Identity: 25.37% |
Span: 774bp (31.3%) |
Frame: 1 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At2G36660.1 |
score: 67 |
e-value: 5e-11 |
Identity: 51.56% |
Span: 192bp (7.8%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
|
| 77 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P42731 |
score: 806 |
e-value: 0 |
Identity: 67.85% |
Span: 1929bp (78.0%) |
Frame: 1 |
| Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1 |
| Match: O64380 |
score: 602 |
e-value: 5e-171 |
Identity: 55.68% |
Span: 1794bp (72.5%) |
Frame: 1 |
| Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1 |
| Match: Q05196 |
score: 594 |
e-value: 1e-168 |
Identity: 54.9% |
Span: 1830bp (74.0%) |
Frame: 1 |
| Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2 |
| Match: Q4P8R9 |
score: 511 |
e-value: 1e-143 |
Identity: 46.34% |
Span: 1827bp (73.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1 |
| Match: Q5KBW2 |
score: 494 |
e-value: 2e-138 |
Identity: 47.2% |
Span: 1830bp (74.0%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1 |
| Match: Q5B630 |
score: 493 |
e-value: 3e-138 |
Identity: 43.81% |
Span: 1803bp (72.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2 |
| Match: A1D4K4 |
score: 493 |
e-value: 2e-138 |
Identity: 44.54% |
Span: 1803bp (72.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1... |
| Match: Q0CR95 |
score: 491 |
e-value: 1e-137 |
Identity: 44.49% |
Span: 1803bp (72.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 ... |
| Match: Q4WK03 |
score: 490 |
e-value: 2e-137 |
Identity: 44.12% |
Span: 1803bp (72.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1 |
| Match: A1CRM1 |
score: 485 |
e-value: 5e-136 |
Identity: 43.38% |
Span: 1803bp (72.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1 |
| Match: Q1DXH0 |
score: 481 |
e-value: 1e-134 |
Identity: 43.73% |
Span: 1788bp (72.3%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1 |
| Match: Q9H361 |
score: 470 |
e-value: 2e-131 |
Identity: 43.44% |
Span: 1800bp (72.8%) |
Frame: 1 |
| Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2 |
| Match: A4QUF0 |
score: 465 |
e-value: 8e-130 |
Identity: 42.38% |
Span: 1788bp (72.3%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1 |
| Match: Q7S6N6 |
score: 462 |
e-value: 4e-129 |
Identity: 40.26% |
Span: 1827bp (73.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1 |
| Match: Q0U1G2 |
score: 459 |
e-value: 4e-128 |
Identity: 42.02% |
Span: 1788bp (72.3%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3 |
| Match: P61286 |
score: 453 |
e-value: 2e-126 |
Identity: 56.97% |
Span: 1191bp (48.2%) |
Frame: 1 |
| Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1 |
| Match: P20965 |
score: 453 |
e-value: 2e-126 |
Identity: 51.95% |
Span: 1335bp (54.0%) |
Frame: 1 |
| Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3 |
| Match: P11940 |
score: 453 |
e-value: 2e-126 |
Identity: 56.97% |
Span: 1191bp (48.2%) |
Frame: 1 |
| Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2 |
| Match: Q5B630 |
score: 183 |
e-value: 4e-45 |
Identity: 34.91% |
Span: 951bp (38.5%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2 |
| Match: A1D4K4 |
score: 177 |
e-value: 4e-43 |
Identity: 34.68% |
Span: 888bp (35.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1... |
| Match: Q4WK03 |
score: 176 |
e-value: 5e-43 |
Identity: 34.68% |
Span: 888bp (35.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1 |
| Match: Q0CR95 |
score: 175 |
e-value: 1e-42 |
Identity: 34.34% |
Span: 888bp (35.9%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 ... |
| Match: Q4P8R9 |
score: 89.4 |
e-value: 1e-16 |
Identity: 31.68% |
Span: 603bp (24.4%) |
Frame: 1 |
| Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1 |
| Match: P11940 |
score: 83.2 |
e-value: 8e-15 |
Identity: 55.07% |
Span: 207bp (8.4%) |
Frame: 1 |
| Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2 |
| Match: P20965 |
score: 82 |
e-value: 2e-14 |
Identity: 55.07% |
Span: 207bp (8.4%) |
Frame: 1 |
| Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3 |
|
| 323 lower scoring hits censored -- only 25 best hits are stored. |
