| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE |
score: 1524 |
e-value: 0 |
Identity: 99.62% |
Span: 2346bp (94.6%) |
Frame: 1 |
| RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged DNA-binding protein 1 >gi49484911|gb|AAT66742.1|... |
| Match: gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC |
score: 1524 |
e-value: 0 |
Identity: 99.62% |
Span: 2346bp (94.6%) |
Frame: 1 |
| RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged DNA-binding protein 1; AltName: Full=High pigmen... |
| Match: gi|225443992|ref|XP_002280744.1| |
score: 1414 |
e-value: 0 |
Identity: 91.42% |
Span: 2343bp (94.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| Match: gi|225443990|ref|XP_002280735.1| |
score: 1414 |
e-value: 0 |
Identity: 91.42% |
Span: 2343bp (94.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| Match: gi|224061051|ref|XP_002300334.1| |
score: 1399 |
e-value: 0 |
Identity: 90.91% |
Span: 2343bp (94.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa] |
| Match: gi|255571318|ref|XP_002526608.1| |
score: 1395 |
e-value: 0 |
Identity: 90.65% |
Span: 2343bp (94.5%) |
Frame: 1 |
| DNA repair protein xp-E, putative [Ricinus communis] >gi223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [R... |
| Match: gi|186511557|ref|NP_001118940.1| |
score: 1362 |
e-value: 0 |
Identity: 87.58% |
Span: 2343bp (94.5%) |
Frame: 1 |
| DDB1A (DAMAGED DNA BINDING PROTEIN 1A); DNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|15235577|ref|NP_192451.1| |
score: 1362 |
e-value: 0 |
Identity: 87.58% |
Span: 2343bp (94.5%) |
Frame: 1 |
| DDB1A (DAMAGED DNA BINDING PROTEIN 1A); DNA binding / protein binding [Arabidopsis thaliana] >gi55976605|sp|Q9M0V3.1|... |
| Match: gi|270244036|emb|CBI30975.1| |
score: 1328 |
e-value: 0 |
Identity: 90.93% |
Span: 2217bp (89.4%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|2911067|emb|CAA17529.1| |
score: 1316 |
e-value: 0 |
Identity: 84.38% |
Span: 2343bp (94.5%) |
Frame: 1 |
| UV-damaged DNA-binding protein-like [Arabidopsis thaliana] >gi7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-... |
| Match: gi|15233515|ref|NP_193842.1| |
score: 1316 |
e-value: 0 |
Identity: 84.38% |
Span: 2343bp (94.5%) |
Frame: 1 |
| DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA binding / protein binding [Arabidopsis thaliana] >gi73620956|sp|... |
| Match: gi|62318656|dbj|BAD95136.1| |
score: 1315 |
e-value: 0 |
Identity: 84.25% |
Span: 2343bp (94.5%) |
Frame: 1 |
| UV-damaged DNA-binding protein- like [Arabidopsis thaliana] |
| Match: gi|115465791|ref|NP_001056495.1| |
score: 1269 |
e-value: 0 |
Identity: 79.77% |
Span: 2388bp (96.3%) |
Frame: 1 |
| Os05g0592400 [Oryza sativa (japonica cultivar-group)] >gi48475231|gb|AAT44300.1| putative DNA damage binding protein ... |
| Match: gi|12082087|dbj|BAB20761.1| |
score: 1263 |
e-value: 0 |
Identity: 79.4% |
Span: 2388bp (96.3%) |
Frame: 1 |
| UV-damaged DNA binding protein [Oryza sativa Japonica Group] |
| Match: gi|242089089|ref|XP_002440377.1| |
score: 1252 |
e-value: 0 |
Identity: 77.41% |
Span: 2388bp (96.3%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor] >gi241945662|gb|EES18807.1| hypothetical protein SORBIDRA... |
| Match: gi|110741229|dbj|BAF02165.1| |
score: 1238 |
e-value: 0 |
Identity: 87.1% |
Span: 2139bp (86.3%) |
Frame: 1 |
| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana] |
| Match: gi|218197365|gb|EEC79792.1| |
score: 1235 |
e-value: 0 |
Identity: 78.2% |
Span: 2388bp (96.3%) |
Frame: 1 |
| hypothetical protein OsI_21216 [Oryza sativa Indica Group] |
| Match: gi|168066745|ref|XP_001785293.1| |
score: 1232 |
e-value: 0 |
Identity: 78.77% |
Span: 2343bp (94.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663100|gb|EDQ49884.1| predicted protein [Physcomitrella... |
| Match: gi|168047617|ref|XP_001776266.1| |
score: 1213 |
e-value: 0 |
Identity: 77.62% |
Span: 2343bp (94.5%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162672361|gb|EDQ58899.1| predicted protein [Physcomitrella... |
| Match: gi|255080490|ref|XP_002503825.1| |
score: 870 |
e-value: 0 |
Identity: 57.43% |
Span: 2343bp (94.5%) |
Frame: 1 |
| predicted protein [Micromonas sp. RCC299] >gi226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|226463101|gb|EEH60379.1| |
score: 837 |
e-value: 0 |
Identity: 52.55% |
Span: 2397bp (96.7%) |
Frame: 1 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|147906138|ref|NP_001083624.1| |
score: 833 |
e-value: 0 |
Identity: 52.85% |
Span: 2406bp (97.1%) |
Frame: 1 |
| damage-specific DNA binding protein 1, 127kDa [Xenopus laevis] >gi82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA d... |
| Match: gi|149062405|gb|EDM12828.1| |
score: 832 |
e-value: 0 |
Identity: 52.38% |
Span: 2406bp (97.1%) |
Frame: 1 |
| damage-specific DNA binding protein 1 [Rattus norvegicus] |
| Match: gi|262103384|gb|EEY61436.1| |
score: 827 |
e-value: 0 |
Identity: 52.46% |
Span: 2349bp (94.8%) |
Frame: 1 |
| DNA damage-binding protein, putative [Phytophthora infestans T30-4] |
| Match: gi|262103384|gb|EEY61436.1| |
score: 26.6 |
e-value: 0 |
Identity: 61.11% |
Span: 54bp (2.2%) |
Frame: 2 |
| DNA damage-binding protein, putative [Phytophthora infestans T30-4] |
|
| 238 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At4G05420.1 |
score: 1362 |
e-value: 0 |
Identity: 87.58% |
Span: 2343bp (94.5%) |
Frame: 1 |
| Symbols: DDB1A | DDB1A (UV-damaged DNA-binding protein 1A); DNA binding | chr4:2746285-2752660 FORWARD |
| Match: At4G21100.1 |
score: 1316 |
e-value: 0 |
Identity: 84.38% |
Span: 2343bp (94.5%) |
Frame: 1 |
| Symbols: DDB1B | DDB1B (DAMAGED DNA BINDING PROTEIN 1 B) | chr4:11258927-11265320 REVERSE |
| Match: At3G55200.1 |
score: 191 |
e-value: 2e-48 |
Identity: 24.38% |
Span: 2307bp (93.1%) |
Frame: 1 |
| splicing factor, putative | chr3:20471510-20475338 FORWARD |
| Match: At3G55220.1 |
score: 191 |
e-value: 2e-48 |
Identity: 24.38% |
Span: 2307bp (93.1%) |
Frame: 1 |
| splicing factor, putative | chr3:20478093-20481921 REVERSE |
| Match: At3G11960.2 |
score: 114 |
e-value: 3e-25 |
Identity: 22.24% |
Span: 1515bp (61.1%) |
Frame: 1 |
| cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein | chr3:3786437... |
| Match: At3G11960.1 |
score: 114 |
e-value: 3e-25 |
Identity: 22.24% |
Span: 1515bp (61.1%) |
Frame: 1 |
| cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein | chr3:3786437... |
| Match: At5G51660.1 |
score: 74.3 |
e-value: 3e-13 |
Identity: 26.45% |
Span: 786bp (31.7%) |
Frame: 1 |
| cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein | chr5:2099747... |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q6QNU4 |
score: 1524 |
e-value: 0 |
Identity: 99.62% |
Span: 2346bp (94.6%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1 |
| Match: Q6E7D1 |
score: 1524 |
e-value: 0 |
Identity: 99.62% |
Span: 2346bp (94.6%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1 |
| Match: Q9M0V3 |
score: 1362 |
e-value: 0 |
Identity: 87.58% |
Span: 2343bp (94.5%) |
Frame: 1 |
| DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1 |
| Match: O49552 |
score: 1316 |
e-value: 0 |
Identity: 84.38% |
Span: 2343bp (94.5%) |
Frame: 1 |
| DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=1 SV=2 |
| Match: Q6P6Z0 |
score: 833 |
e-value: 0 |
Identity: 52.85% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1 |
| Match: Q805F9 |
score: 831 |
e-value: 0 |
Identity: 52.49% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1 |
| Match: A1A4K3 |
score: 831 |
e-value: 0 |
Identity: 52.26% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Bos taurus GN=DDB1 PE=2 SV=1 |
| Match: Q3U1J4 |
score: 830 |
e-value: 0 |
Identity: 52.26% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2 |
| Match: Q16531 |
score: 829 |
e-value: 0 |
Identity: 52.14% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1 |
| Match: P33194 |
score: 829 |
e-value: 0 |
Identity: 52.14% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Cercopithecus aethiops GN=DDB1 PE=1 SV=1 |
| Match: Q5R649 |
score: 827 |
e-value: 0 |
Identity: 52.02% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1 |
| Match: Q9ESW0 |
score: 817 |
e-value: 0 |
Identity: 51.31% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Rattus norvegicus GN=Ddb1 PE=2 SV=1 |
| Match: Q9XYZ5 |
score: 741 |
e-value: 0 |
Identity: 47.76% |
Span: 2406bp (97.1%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Drosophila melanogaster GN=pic PE=1 SV=1 |
| Match: B0M0P5 |
score: 658 |
e-value: 0 |
Identity: 44.12% |
Span: 2298bp (92.7%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Dictyostelium discoideum GN=repE PE=1 SV=1 |
| Match: Q21554 |
score: 483 |
e-value: 4e-135 |
Identity: 34.99% |
Span: 2349bp (94.8%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Caenorhabditis elegans GN=ddb-1 PE=1 SV=2 |
| Match: O13807 |
score: 283 |
e-value: 5e-75 |
Identity: 27.17% |
Span: 2325bp (93.8%) |
Frame: 1 |
| DNA damage-binding protein 1 OS=Schizosaccharomyces pombe GN=ddb1 PE=1 SV=1 |
| Match: Q54SA7 |
score: 208 |
e-value: 2e-52 |
Identity: 22.96% |
Span: 2316bp (93.4%) |
Frame: 1 |
| Probable splicing factor 3B subunit 3 OS=Dictyostelium discoideum GN=sf3b3 PE=3 SV=1 |
| Match: Q1LVE8 |
score: 184 |
e-value: 3e-45 |
Identity: 22.07% |
Span: 2313bp (93.3%) |
Frame: 1 |
| Splicing factor 3B subunit 3 OS=Danio rerio GN=sf3b3 PE=2 SV=1 |
| Match: Q921M3 |
score: 182 |
e-value: 1e-44 |
Identity: 22.58% |
Span: 2313bp (93.3%) |
Frame: 1 |
| Splicing factor 3B subunit 3 OS=Mus musculus GN=Sf3b3 PE=2 SV=1 |
| Match: Q15393 |
score: 182 |
e-value: 1e-44 |
Identity: 22.58% |
Span: 2313bp (93.3%) |
Frame: 1 |
| Splicing factor 3B subunit 3 OS=Homo sapiens GN=SF3B3 PE=1 SV=4 |
| Match: A0JN52 |
score: 182 |
e-value: 1e-44 |
Identity: 22.58% |
Span: 2313bp (93.3%) |
Frame: 1 |
| Splicing factor 3B subunit 3 OS=Bos taurus GN=SF3B3 PE=2 SV=1 |
| Match: Q5RBI5 |
score: 182 |
e-value: 1e-44 |
Identity: 22.58% |
Span: 2313bp (93.3%) |
Frame: 1 |
| Splicing factor 3B subunit 3 OS=Pongo abelii GN=SF3B3 PE=2 SV=1 |
| Match: Q9UTT2 |
score: 180 |
e-value: 5e-44 |
Identity: 23.54% |
Span: 2313bp (93.3%) |
Frame: 1 |
| Pre-mRNA-splicing factor rse1 OS=Schizosaccharomyces pombe GN=prp12 PE=1 SV=1 |
| Match: Q4WLI5 |
score: 179 |
e-value: 1e-43 |
Identity: 25.51% |
Span: 2157bp (87.0%) |
Frame: 1 |
| Pre-mRNA-splicing factor rse1 OS=Aspergillus fumigatus GN=rse1 PE=3 SV=1 |
| Match: Q5B1X8 |
score: 171 |
e-value: 3e-41 |
Identity: 24.94% |
Span: 2211bp (89.2%) |
Frame: 1 |
| Pre-mRNA-splicing factor rse1 OS=Emericella nidulans GN=rse1 PE=3 SV=1 |
|
| 18 lower scoring hits censored -- only 25 best hits are stored. |
