| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|157350432|emb|CAO40412.1| |
score: 650 |
e-value: 0 |
Identity: 70.77% |
Span: 1557bp (61.5%) |
Frame: 3 |
| unnamed |
| Match: gi|79356321|ref|NP_174334.2| |
score: 634 |
e-value: 1e-179 |
Identity: 58.6% |
Span: 2013bp (79.5%) |
Frame: 3 |
| CPSF30; RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding [Arabidopsis thaliana... |
| Match: gi|115469520|ref|NP_001058359.1| |
score: 591 |
e-value: 1e-166 |
Identity: 53.85% |
Span: 1995bp (78.8%) |
Frame: 3 |
| Os06g0677700 [Oryza sativa (japonica cultivar-group)] >gi122167909|sp|Q0DA50.1|C3H45_ORYSJ RecName: Full=Zinc finger ... |
| Match: gi|52076625|dbj|BAD45526.1| |
score: 582 |
e-value: 7e-164 |
Identity: 52.87% |
Span: 1995bp (78.8%) |
Frame: 3 |
| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa Japonica Group] >gi52076911|dbj|BAD45923.1| zinc fing... |
| Match: gi|125556470|gb|EAZ02076.1| |
score: 523 |
e-value: 3e-146 |
Identity: 59.06% |
Span: 1431bp (56.5%) |
Frame: 3 |
| hypothetical protein OsI_24157 [Oryza sativa Indica Group] |
| Match: gi|125598232|gb|EAZ38012.1| |
score: 451 |
e-value: 2e-124 |
Identity: 53.52% |
Span: 1602bp (63.3%) |
Frame: 3 |
| hypothetical |
| Match: gi|168001521|ref|XP_001753463.1| |
score: 445 |
e-value: 1e-122 |
Identity: 52.98% |
Span: 1299bp (51.3%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162695342|gb|EDQ81686.1| predicted protein [Physcomitrella... |
| Match: gi|6634766|gb|AAF19746.1|AC009917_5 |
score: 278 |
e-value: 1e-72 |
Identity: 55.26% |
Span: 1068bp (42.2%) |
Frame: 3 |
| Contains |
| Match: gi|145324080|ref|NP_001077629.1| |
score: 255 |
e-value: 1e-65 |
Identity: 65.48% |
Span: 591bp (23.3%) |
Frame: 3 |
| CPSF30; RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding [Arabidopsis thaliana... |
| Match: gi|147801779|emb|CAN61344.1| |
score: 214 |
e-value: 2e-53 |
Identity: 64.11% |
Span: 813bp (32.1%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|190899688|gb|ACE98357.1| |
score: 187 |
e-value: 3e-45 |
Identity: 90% |
Span: 270bp (10.7%) |
Frame: 3 |
| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula] >gi190899692|gb|ACE98359.1| C-x8-C-x5-C-x3-H type Zn-finger [Populu... |
| Match: gi|190899694|gb|ACE98360.1| |
score: 187 |
e-value: 4e-45 |
Identity: 90% |
Span: 270bp (10.7%) |
Frame: 3 |
| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula] |
| Match: gi|190899698|gb|ACE98362.1| |
score: 184 |
e-value: 3e-44 |
Identity: 88.89% |
Span: 270bp (10.7%) |
Frame: 3 |
| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula] >gi190899706|gb|ACE98366.1| C-x8-C-x5-C-x3-H type Zn-finger [Populu... |
| Match: gi|190899718|gb|ACE98372.1| |
score: 182 |
e-value: 1e-43 |
Identity: 88.89% |
Span: 270bp (10.7%) |
Frame: 3 |
| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula] |
| Match: gi|190899690|gb|ACE98358.1| |
score: 181 |
e-value: 2e-43 |
Identity: 87.78% |
Span: 270bp (10.7%) |
Frame: 3 |
| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula] |
| Match: gi|145346398|ref|XP_001417675.1| |
score: 149 |
e-value: 1e-33 |
Identity: 74.07% |
Span: 243bp (9.6%) |
Frame: 3 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144577903|gb|ABO95968.1| predicted protein [Ostreococcus luci... |
| Match: gi|168022294|ref|XP_001763675.1| |
score: 138 |
e-value: 3e-30 |
Identity: 49.26% |
Span: 408bp (16.1%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162685168|gb|EDQ71565.1| predicted protein [Physcomitrella... |
| Match: gi|157357138|emb|CAO63632.1| |
score: 137 |
e-value: 5e-30 |
Identity: 50.36% |
Span: 411bp (16.2%) |
Frame: 3 |
| unnamed |
| Match: gi|42572881|ref|NP_974537.1| |
score: 132 |
e-value: 1e-28 |
Identity: 50.35% |
Span: 420bp (16.6%) |
Frame: 3 |
| YT521-B-like family protein [Arabidopsis thaliana] >gi4586102|emb|CAB40938.1| putative protein [Arabidopsis thaliana]... |
| Match: gi|42566517|ref|NP_192934.2| |
score: 132 |
e-value: 1e-28 |
Identity: 50.35% |
Span: 420bp (16.6%) |
Frame: 3 |
| YT521-B-like family protein [Arabidopsis thaliana] |
| Match: gi|114601166|ref|XP_517881.2| |
score: 127 |
e-value: 5e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|82997081|ref|XP_915830.1| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|197100155|ref|NP_001126423.1| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| YTH |
| Match: gi|74718549|sp|Q9H6S0|YTDC2_HUMAN |
score: 126 |
e-value: 1e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| YTH |
| Match: gi|119569363|gb|EAW48978.1| |
score: 126 |
e-value: 1e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| YTH |
| Match: gi|126320676|ref|XP_001370066.1| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|74146224|dbj|BAE24242.1| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| gi|74146224|dbj|BAE24242.1| unnamed protein product [Mus musculus] |
| Match: gi|194220016|ref|XP_001918336.1| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| PREDICTED: YTH domain containing 2 [Equus caballus] |
| Match: gi|73970539|ref|XP_531871.2| |
score: 126 |
e-value: 1e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| gi|73970539|ref|XP_531871.2| PREDICTED: similar to YTH domain containing 2 [Canis familiaris] |
| Match: gi|148678047|gb|EDL09994.1| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| mCG11938 |
| Match: gi|47077415|dbj|BAD18595.1| |
score: 126 |
e-value: 1e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| gi|47077415|dbj|BAD18595.1| unnamed protein product [Homo sapiens] |
| Match: gi|119569365|gb|EAW48980.1| |
score: 126 |
e-value: 1e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| YTH |
| Match: gi|119901798|ref|XP_614159.3| |
score: 126 |
e-value: 8e-27 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| PREDICTED: similar to YTH domain containing 2 [Bos taurus] |
| Match: gi|219447558|ref|XP_002221533.1| |
score: 125 |
e-value: 2e-26 |
Identity: 47.73% |
Span: 396bp (15.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|187950589|gb|AAI37286.1| |
score: 125 |
e-value: 2e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| YTH |
| Match: gi|159164849|pdb|2YU6|A |
score: 125 |
e-value: 1e-26 |
Identity: 50% |
Span: 402bp (15.9%) |
Frame: 3 |
| Chain |
| Match: gi|149029549|gb|EDL84747.1| |
score: 125 |
e-value: 1e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| similar |
| Match: gi|38505213|ref|NP_073739.2| |
score: 125 |
e-value: 2e-26 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| gi|38505213|ref|NP_073739.2| FLJ21940 protein [Homo sapiens] |
| Match: gi|219486270|ref|XP_002240132.1| |
score: 124 |
e-value: 3e-26 |
Identity: 47.73% |
Span: 396bp (15.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|118104219|ref|XP_413970.2| |
score: 124 |
e-value: 5e-26 |
Identity: 49.25% |
Span: 402bp (15.9%) |
Frame: 3 |
| PREDICTED: similar to YTH domain containing 2 [Gallus gallus] |
| Match: gi|156382101|ref|XP_001632393.1| |
score: 122 |
e-value: 1e-25 |
Identity: 44.85% |
Span: 408bp (16.1%) |
Frame: 3 |
| predicted |
| Match: gi|219130928|ref|XP_002185604.1| |
score: 122 |
e-value: 1e-25 |
Identity: 26.74% |
Span: 987bp (39.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|189519860|ref|XP_695496.3| |
score: 121 |
e-value: 4e-25 |
Identity: 46.04% |
Span: 417bp (16.5%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|211965110|gb|EEB00306.1| |
score: 118 |
e-value: 2e-24 |
Identity: 36.53% |
Span: 501bp (19.8%) |
Frame: 3 |
| zinc |
| Match: gi|156379627|ref|XP_001631558.1| |
score: 114 |
e-value: 3e-23 |
Identity: 48.2% |
Span: 402bp (15.9%) |
Frame: 3 |
| predicted |
| Match: gi|115901588|ref|XP_783255.2| |
score: 112 |
e-value: 2e-22 |
Identity: 39.62% |
Span: 471bp (18.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|148224696|ref|NP_001088293.1| |
score: 111 |
e-value: 3e-22 |
Identity: 40.13% |
Span: 465bp (18.4%) |
Frame: 3 |
| hypothetical |
| Match: gi|170042916|ref|XP_001849154.1| |
score: 110 |
e-value: 8e-22 |
Identity: 39.63% |
Span: 480bp (19.0%) |
Frame: 3 |
| splicing |
| Match: gi|156088693|ref|XP_001611753.1| |
score: 109 |
e-value: 1e-21 |
Identity: 39.51% |
Span: 477bp (18.8%) |
Frame: 3 |
| YT521-B-like |
| Match: gi|56118412|ref|NP_001008121.1| |
score: 109 |
e-value: 1e-21 |
Identity: 39.49% |
Span: 465bp (18.4%) |
Frame: 3 |
| MGC89461 |
| Match: gi|55925411|ref|NP_001007411.1| |
score: 109 |
e-value: 1e-21 |
Identity: 36.22% |
Span: 519bp (20.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|85090781|ref|XP_958582.1| |
score: 108 |
e-value: 3e-21 |
Identity: 35.8% |
Span: 504bp (19.9%) |
Frame: 3 |
| hypothetical |
| Match: gi|157127743|ref|XP_001661159.1| |
score: 108 |
e-value: 2e-21 |
Identity: 39.63% |
Span: 480bp (19.0%) |
Frame: 3 |
| splicing |
| Match: gi|159164852|pdb|2YUD|A |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| Chain |
| Match: gi|72534750|ref|NP_001026902.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| gi|72534750|ref|NP_001026902.1| splicing factor YT521-B isoform 1 [Homo sapiens] >gi|45708780|gb|AAH41119.1| Splicing... |
| Match: gi|124430549|ref|NP_808348.2| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|149035126|gb|EDL89830.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| splicing |
| Match: gi|109074647|ref|XP_001098270.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|126331593|ref|XP_001366725.1| |
score: 106 |
e-value: 9e-21 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|50511209|dbj|BAD32590.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| gi|50511209|dbj|BAD32590.1| mKIAA1966 protein [Mus musculus] |
| Match: gi|73975097|ref|XP_861358.1| |
score: 106 |
e-value: 1e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|114594504|ref|XP_517262.2| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|114051698|ref|NP_001039985.1| |
score: 106 |
e-value: 9e-21 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|148706022|gb|EDL37969.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| mCG1787 |
| Match: gi|149035124|gb|EDL89828.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| splicing |
| Match: gi|149751627|ref|XP_001501568.1| |
score: 106 |
e-value: 1e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|156064289|ref|XP_001598066.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.57% |
Span: 417bp (16.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|18916821|dbj|BAB85552.1| |
score: 106 |
e-value: 1e-20 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| gi|18916821|dbj|BAB85552.1| KIAA1966 protein [Homo sapiens] |
| Match: gi|149751625|ref|XP_001501576.1| |
score: 106 |
e-value: 9e-21 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|73975101|ref|XP_532391.2| |
score: 106 |
e-value: 1e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| gi|73975101|ref|XP_532391.2| PREDICTED: similar to splicing factor YT521-B isoform 2 isoform 1 [Canis familiaris] |
| Match: gi|197100298|ref|NP_001125792.1| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| YTH |
| Match: gi|193809019|emb|CAQ39722.1| |
score: 105 |
e-value: 3e-20 |
Identity: 37.78% |
Span: 405bp (16.0%) |
Frame: 3 |
| Rat |
| Match: gi|16551831|dbj|BAB71181.1| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| unnamed |
| Match: gi|2696611|dbj|BAA23885.1| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| gi|2696611|dbj|BAA23885.1| RNA splicing-related protein [Rattus norvegicus] |
| Match: gi|94536805|ref|NP_588611.2| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| splicing |
| Match: gi|63995069|gb|AAY41024.1| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| gi|63995069|gb|AAY41024.1| unknown [Homo sapiens] |
| Match: gi|91092310|ref|XP_969804.1| |
score: 105 |
e-value: 2e-20 |
Identity: 37.2% |
Span: 486bp (19.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|171682272|ref|XP_001906079.1| |
score: 105 |
e-value: 3e-20 |
Identity: 39.01% |
Span: 417bp (16.5%) |
Frame: 3 |
| unnamed |
| Match: gi|212511561|gb|EEB14501.1| |
score: 105 |
e-value: 2e-20 |
Identity: 40.94% |
Span: 441bp (17.4%) |
Frame: 3 |
| splicing |
| Match: gi|149035125|gb|EDL89829.1| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| splicing |
| Match: gi|47199414|emb|CAF88528.1| |
score: 105 |
e-value: 2e-20 |
Identity: 42.65% |
Span: 408bp (16.1%) |
Frame: 3 |
| gi|47199414|emb|CAF88528.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|19173798|ref|NP_596914.1| |
score: 105 |
e-value: 2e-20 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| gi|19173798|ref|NP_596914.1| splicing factor YT521-B [Rattus norvegicus] gi|28380115|sp|Q9QY02|S521_RAT Putative spli... |
| Match: gi|66826447|ref|XP_646578.1| |
score: 104 |
e-value: 3e-20 |
Identity: 51.85% |
Span: 237bp (9.4%) |
Frame: 3 |
| CCCH-type zinc finger-containing protein [Dictyostelium discoideum AX4] >gi60474487|gb|EAL72424.1| CCCH-type zinc fin... |
| Match: gi|194749423|ref|XP_001957138.1| |
score: 104 |
e-value: 3e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| GF10271 |
| Match: gi|156094157|ref|XP_001613116.1| |
score: 104 |
e-value: 5e-20 |
Identity: 32.91% |
Span: 474bp (18.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|195441434|ref|XP_002068514.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| GK20378 |
| Match: gi|198435163|ref|XP_002127950.1| |
score: 103 |
e-value: 6e-20 |
Identity: 37.5% |
Span: 495bp (19.5%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|195337162|ref|XP_002035198.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| GM14053 |
| Match: gi|24656816|ref|NP_728876.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| gi|24656816|ref|NP_728876.1| CG12076-PB [Drosophila melanogaster] gi|23092920|gb|AAN11564.1| CG12076-PB [Drosophila m... |
| Match: gi|24656811|ref|NP_647811.2| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| gi|24656811|ref|NP_647811.2| CG12076-PA [Drosophila melanogaster] gi|23092919|gb|AAF47768.2| CG12076-PA [Drosophila m... |
| Match: gi|195587488|ref|XP_002083493.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| GD13329 |
| Match: gi|5052478|gb|AAD38569.1|AF145594_1 |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| BcDNA.GH01918 |
| Match: gi|194866090|ref|XP_001971751.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| GG14260 |
| Match: gi|25012176|gb|AAN71205.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| gi|25012176|gb|AAN71205.1| GH27257p [Drosophila melanogaster] |
| Match: gi|195491430|ref|XP_002093557.1| |
score: 103 |
e-value: 6e-20 |
Identity: 36.75% |
Span: 492bp (19.4%) |
Frame: 3 |
| GE20687 |
| Match: gi|156537207|ref|XP_001604858.1| |
score: 102 |
e-value: 1e-19 |
Identity: 38.18% |
Span: 489bp (19.3%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|158295037|ref|XP_315971.4| |
score: 102 |
e-value: 1e-19 |
Identity: 35.96% |
Span: 510bp (20.1%) |
Frame: 3 |
| AGAP005940-PB |
| Match: gi|195376107|ref|XP_002046838.1| |
score: 102 |
e-value: 2e-19 |
Identity: 36.14% |
Span: 492bp (19.4%) |
Frame: 3 |
| GJ13107 |
| Match: gi|219504187|ref|XP_002248333.1| |
score: 102 |
e-value: 2e-19 |
Identity: 37.97% |
Span: 468bp (18.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|157350432|emb|CAO40412.1| |
score: 25 |
e-value: 0 |
Identity: 52.38% |
Span: 63bp (2.5%) |
Frame: 2 |
| unnamed |
|
| 151 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At1G30460.1 |
score: 634 |
e-value: 0 |
Identity: 58.6% |
Span: 2013bp (79.5%) |
Frame: 3 |
| Symbols: CPSF30, ATCPSF30 | ATCPSF30/CPSF30; RNA binding / calmodulin binding / nucleic acid binding | chr1:10771451... |
| Match: At1G30460.2 |
score: 255 |
e-value: 8e-68 |
Identity: 65.48% |
Span: 591bp (23.3%) |
Frame: 3 |
| Symbols: CPSF30, ATCPSF30 | ATCPSF30/CPSF30 | chr1:10774428-10775305 REVERSE |
| Match: At4G11970.1 |
score: 132 |
e-value: 8e-31 |
Identity: 50.35% |
Span: 420bp (16.6%) |
Frame: 3 |
| YT521-B-like family protein | chr4:7181217-7182947 FORWARD |
| Match: At4G11970.2 |
score: 132 |
e-value: 8e-31 |
Identity: 50.35% |
Span: 420bp (16.6%) |
Frame: 3 |
| YT521-B-like family protein | chr4:7181217-7183259 FORWARD |
| Match: At1G55500.1 |
score: 68.9 |
e-value: 1e-11 |
Identity: 28.49% |
Span: 483bp (19.1%) |
Frame: 3 |
| similar to ECT2 [Arabidopsis thaliana] (TAIR:AT3G13460.4); similar to YT521-B-like protein [Medicago truncatula] (GB... |
|
| swissprot [blastx] | Showing best 35 hits recorded |
| Match: Q5R746 |
score: 126 |
e-value: 5e-28 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 |
| Match: Q9H6S0 |
score: 126 |
e-value: 7e-28 |
Identity: 48.92% |
Span: 417bp (16.5%) |
Frame: 3 |
| Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2 |
| Match: Q96MU7 |
score: 106 |
e-value: 7e-22 |
Identity: 39.51% |
Span: 480bp (19.0%) |
Frame: 3 |
| YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 |
| Match: Q9QY02 |
score: 105 |
e-value: 1e-21 |
Identity: 41.78% |
Span: 432bp (17.1%) |
Frame: 3 |
| YTH domain-containing protein 1 OS=Rattus norvegicus GN=Ythdc1 PE=1 SV=1 |
| Match: O95639 |
score: 98.2 |
e-value: 2e-19 |
Identity: 48.15% |
Span: 237bp (9.4%) |
Frame: 3 |
| Cleavage and polyadenylation specificity factor subunit 4 OS=Homo sapiens GN=CPSF4 PE=1 SV=1 |
| Match: Q6DJP7 |
score: 98.2 |
e-value: 2e-19 |
Identity: 48.15% |
Span: 237bp (9.4%) |
Frame: 3 |
| Cleavage and polyadenylation specificity factor subunit 4 OS=Xenopus laevis GN=cpsf4 PE=2 SV=1 |
| Match: Q66KE3 |
score: 98.2 |
e-value: 2e-19 |
Identity: 48.15% |
Span: 237bp (9.4%) |
Frame: 3 |
| Cleavage and polyadenylation specificity factor subunit 4 OS=Xenopus tropicalis GN=cpsf4 PE=2 SV=1 |
| Match: Q5FVR7 |
score: 98.2 |
e-value: 2e-19 |
Identity: 48.15% |
Span: 237bp (9.4%) |
Frame: 3 |
| Cleavage and polyadenylation specificity factor subunit 4 OS=Rattus norvegicus GN=Cpsf4 PE=2 SV=1 |
| Match: O19137 |
score: 98.2 |
e-value: 2e-19 |
Identity: 48.15% |
Span: 237bp (9.4%) |
Frame: 3 |
| Cleavage and polyadenylation specificity factor subunit 4 OS=Bos taurus GN=CPSF4 PE=2 SV=1 |
| Match: A6NMK7 |
score: 97.1 |
e-value: 4e-19 |
Identity: 48.78% |
Span: 240bp (9.5%) |
Frame: 3 |
| Putative cleavage and polyadenylation specificity factor subunit 4-like protein OS=Homo sapiens GN=CPSF4L PE=2 SV=3 |
| Match: Q4P384 |
score: 95.1 |
e-value: 2e-18 |
Identity: 47.13% |
Span: 252bp (10.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Ustilago maydis GN=YTH1 PE=3 SV=1 |
| Match: Q9UTD1 |
score: 90.1 |
e-value: 5e-17 |
Identity: 44.71% |
Span: 246bp (9.7%) |
Frame: 3 |
| mRNA 3'-end-processing protein yth1 OS=Schizosaccharomyces pombe GN=yth1 PE=2 SV=1 |
| Match: Q8BQZ5 |
score: 87.8 |
e-value: 3e-16 |
Identity: 37.5% |
Span: 321bp (12.7%) |
Frame: 3 |
| Cleavage and polyadenylation specificity factor subunit 4 OS=Mus musculus GN=Cpsf4 PE=2 SV=1 |
| Match: Q6CKU1 |
score: 85.5 |
e-value: 1e-15 |
Identity: 45.57% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Kluyveromyces lactis GN=YTH1 PE=3 SV=1 |
| Match: Q59T36 |
score: 85.1 |
e-value: 2e-15 |
Identity: 46.84% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Candida albicans GN=YTH1 PE=3 SV=1 |
| Match: Q6BTT1 |
score: 84.7 |
e-value: 2e-15 |
Identity: 45.57% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Debaryomyces hansenii GN=YTH1 PE=3 SV=2 |
| Match: Q06102 |
score: 84 |
e-value: 4e-15 |
Identity: 48.1% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Saccharomyces cerevisiae GN=YTH1 PE=1 SV=1 |
| Match: Q4IPA4 |
score: 83.2 |
e-value: 7e-15 |
Identity: 45.57% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Gibberella zeae GN=YTH1 PE=3 SV=1 |
| Match: Q7SGR2 |
score: 83.2 |
e-value: 7e-15 |
Identity: 45.68% |
Span: 234bp (9.2%) |
Frame: 3 |
| mRNA 3'-end-processing protein yth-1 OS=Neurospora crassa GN=yth-1 PE=3 SV=1 |
| Match: Q758T3 |
score: 80.5 |
e-value: 4e-14 |
Identity: 43.04% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Ashbya gossypii GN=YTH1 PE=3 SV=1 |
| Match: Q6FTL0 |
score: 80.1 |
e-value: 6e-14 |
Identity: 43.04% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Candida glabrata GN=YTH1 PE=3 SV=1 |
| Match: Q6C922 |
score: 77 |
e-value: 5e-13 |
Identity: 44.3% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Yarrowia lipolytica GN=YTH1 PE=3 SV=1 |
| Match: Q5BGN2 |
score: 76.6 |
e-value: 6e-13 |
Identity: 44.3% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein yth1 OS=Emericella nidulans GN=yth1 PE=3 SV=1 |
| Match: Q2URI6 |
score: 76.3 |
e-value: 8e-13 |
Identity: 44.3% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein yth1 OS=Aspergillus oryzae GN=yth1 PE=3 SV=1 |
| Match: Q4WKD9 |
score: 73.2 |
e-value: 7e-12 |
Identity: 43.04% |
Span: 228bp (9.0%) |
Frame: 3 |
| mRNA 3'-end-processing protein yth1 OS=Aspergillus fumigatus GN=yth1 PE=3 SV=1 |
| Match: P59326 |
score: 73.2 |
e-value: 7e-12 |
Identity: 26.38% |
Span: 480bp (19.0%) |
Frame: 3 |
| YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1 |
| Match: Q5KMN5 |
score: 72.8 |
e-value: 9e-12 |
Identity: 38.55% |
Span: 246bp (9.7%) |
Frame: 3 |
| mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans GN=YTH1 PE=3 SV=1 |
| Match: Q06390 |
score: 71.6 |
e-value: 2e-11 |
Identity: 26.85% |
Span: 438bp (17.3%) |
Frame: 3 |
| YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1 |
| Match: Q9BYJ9 |
score: 71.6 |
e-value: 2e-11 |
Identity: 25.77% |
Span: 480bp (19.0%) |
Frame: 3 |
| YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1 |
| Match: Q5RFL8 |
score: 70.9 |
e-value: 3e-11 |
Identity: 26.71% |
Span: 474bp (18.7%) |
Frame: 3 |
| YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1 |
| Match: Q7Z739 |
score: 70.9 |
e-value: 3e-11 |
Identity: 26.71% |
Span: 474bp (18.7%) |
Frame: 3 |
| YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1 |
| Match: Q8BYK6 |
score: 70.9 |
e-value: 3e-11 |
Identity: 26.71% |
Span: 474bp (18.7%) |
Frame: 3 |
| YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2 |
| Match: Q9Y5A9 |
score: 69.7 |
e-value: 8e-11 |
Identity: 26.09% |
Span: 474bp (18.7%) |
Frame: 3 |
| YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2 |
| Match: Q0VCZ3 |
score: 69.7 |
e-value: 8e-11 |
Identity: 26.09% |
Span: 474bp (18.7%) |
Frame: 3 |
| YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1 |
| Match: Q4R5D9 |
score: 69.7 |
e-value: 8e-11 |
Identity: 26.09% |
Span: 474bp (18.7%) |
Frame: 3 |
| YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1 |
|