| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255539194|ref|XP_002510662.1| |
score: 1190 |
e-value: 0 |
Identity: 73.27% |
Span: 2373bp (92.0%) |
Frame: 3 |
| ribosome biogenesis protein tsr1, putative [Ricinus communis] >gi223551363|gb|EEF52849.1| ribosome biogenesis protein... |
| Match: gi|225457538|ref|XP_002270499.1| |
score: 1189 |
e-value: 0 |
Identity: 72.56% |
Span: 2364bp (91.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270258611|emb|CBI40710.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224086026|ref|XP_002307783.1| |
score: 1140 |
e-value: 0 |
Identity: 70.26% |
Span: 2370bp (91.9%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222857232|gb|EEE94779.1| predicted protein [Populus trichocarpa] |
| Match: gi|18400634|ref|NP_564480.1| |
score: 1120 |
e-value: 0 |
Identity: 67.8% |
Span: 2361bp (91.6%) |
Frame: 3 |
| unknown protein [Arabidopsis thaliana] >gi13605690|gb|AAK32838.1|AF361826_1 At1g42440/F7F22_7 [Arabidopsis thaliana] ... |
| Match: gi|6691183|gb|AAF24521.1|AC007534_2 |
score: 1038 |
e-value: 0 |
Identity: 62.17% |
Span: 2361bp (91.6%) |
Frame: 3 |
| F7F22.4 [Arabidopsis thaliana] |
| Match: gi|115485169|ref|NP_001067728.1| |
score: 1004 |
e-value: 0 |
Identity: 64.11% |
Span: 2358bp (91.5%) |
Frame: 3 |
| Os11g0298400 [Oryza sativa (japonica cultivar-group)] >gi62734700|gb|AAX96809.1| expressed protein [Oryza sativa Japo... |
| Match: gi|218185615|gb|EEC68042.1| |
score: 1001 |
e-value: 0 |
Identity: 64.23% |
Span: 2358bp (91.5%) |
Frame: 3 |
| hypothetical protein OsI_35872 [Oryza sativa Indica Group] |
| Match: gi|223949973|gb|ACN29070.1| |
score: 994 |
e-value: 0 |
Identity: 61.93% |
Span: 2358bp (91.5%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|242091527|ref|XP_002441596.1| |
score: 989 |
e-value: 0 |
Identity: 61.93% |
Span: 2358bp (91.5%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_09g030040 [Sorghum bicolor] >gi241946881|gb|EES20026.1| hypothetical protein SORBIDRA... |
| Match: gi|222615869|gb|EEE52001.1| |
score: 938 |
e-value: 0 |
Identity: 59.68% |
Span: 2358bp (91.5%) |
Frame: 3 |
| hypothetical protein OsJ_33698 [Oryza sativa Japonica Group] |
| Match: gi|168010424|ref|XP_001757904.1| |
score: 788 |
e-value: 0 |
Identity: 52.41% |
Span: 2349bp (91.1%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162690781|gb|EDQ77146.1| predicted protein [Physcomitrella... |
| Match: gi|147859908|emb|CAN83143.1| |
score: 616 |
e-value: 4e-174 |
Identity: 64.13% |
Span: 1359bp (52.7%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|156372836|ref|XP_001629241.1| |
score: 523 |
e-value: 6e-146 |
Identity: 40% |
Span: 2337bp (90.7%) |
Frame: 3 |
| predicted protein [Nematostella vectensis] >gi156216237|gb|EDO37178.1| predicted protein [Nematostella vectensis] |
| Match: gi|118100273|ref|XP_001234320.1| |
score: 522 |
e-value: 7e-146 |
Identity: 39.63% |
Span: 2337bp (90.7%) |
Frame: 3 |
| PREDICTED: TSR1, 20S rRNA accumulation, homolog [Gallus gallus] |
| Match: gi|47227759|emb|CAG08922.1| |
score: 521 |
e-value: 2e-145 |
Identity: 39.46% |
Span: 2337bp (90.7%) |
Frame: 3 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|260804857|ref|XP_002597304.1| |
score: 520 |
e-value: 5e-145 |
Identity: 38.74% |
Span: 2337bp (90.7%) |
Frame: 3 |
| hypothetical protein BRAFLDRAFT_203247 [Branchiostoma floridae] >gi229282567|gb|EEN53316.1| hypothetical protein BRAF... |
| Match: gi|224076370|ref|XP_002194544.1| |
score: 512 |
e-value: 8e-143 |
Identity: 39.89% |
Span: 2178bp (84.5%) |
Frame: 3 |
| PREDICTED: TSR1, 20S rRNA accumulation [Taeniopygia guttata] |
| Match: gi|62734567|gb|AAX96676.1| |
score: 508 |
e-value: 1e-141 |
Identity: 71.56% |
Span: 999bp (38.8%) |
Frame: 3 |
| Protein of unknown function (DUF663) [Oryza sativa Japonica Group] |
| Match: gi|291240734|ref|XP_002740292.1| |
score: 507 |
e-value: 2e-141 |
Identity: 38.2% |
Span: 2337bp (90.7%) |
Frame: 3 |
| PREDICTED: Temporarily Assigned Gene name family member (tag-151)-like [Saccoglossus kowalevskii] |
| Match: gi|217074358|gb|ACJ85539.1| |
score: 507 |
e-value: 3e-141 |
Identity: 67.55% |
Span: 1131bp (43.9%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|126314243|ref|XP_001372004.1| |
score: 503 |
e-value: 5e-140 |
Identity: 39.48% |
Span: 2337bp (90.7%) |
Frame: 3 |
| PREDICTED: similar to TSR1, 20S rRNA accumulation, homolog [Monodelphis domestica] |
| Match: gi|148230961|ref|NP_001088282.1| |
score: 500 |
e-value: 4e-139 |
Identity: 37.98% |
Span: 2337bp (90.7%) |
Frame: 3 |
| TSR1, 20S rRNA accumulation, homolog [Xenopus laevis] >gi82180366|sp|Q5XGY1.1|TSR1_XENLA RecName: Full=Pre-rRNA-proce... |
| Match: gi|171846500|gb|AAI61761.1| |
score: 498 |
e-value: 1e-138 |
Identity: 38.9% |
Span: 2163bp (83.9%) |
Frame: 3 |
| tsr1 protein [Xenopus (Silurana) tropicalis] |
| Match: gi|197101928|ref|NP_001127041.1| |
score: 493 |
e-value: 5e-137 |
Identity: 37.91% |
Span: 2337bp (90.7%) |
Frame: 3 |
| TSR1, 20S rRNA accumulation, homolog [Pongo abelii] >gi75040895|sp|Q5R434.1|TSR1_PONAB RecName: Full=Pre-rRNA-process... |
| Match: gi|109112682|ref|XP_001086730.1| |
score: 490 |
e-value: 4e-136 |
Identity: 37.66% |
Span: 2337bp (90.7%) |
Frame: 3 |
| PREDICTED: similar to Temporarily Assigned Gene name family member (tag-151) [Macaca mulatta] |
|
| 235 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G42440.1 |
score: 1120 |
e-value: 0 |
Identity: 67.8% |
Span: 2361bp (91.6%) |
Frame: 3 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06720.1); similar to Os11g0298400 [Oryza sativa (japonic... |
| Match: At1G06720.1 |
score: 68.6 |
e-value: 2e-11 |
Identity: 21.54% |
Span: 714bp (27.7%) |
Frame: 3 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G42440.1); similar to PREDICTED: hypothetical protein LOC... |
|
| swissprot [blastx] | Showing best 13 hits recorded |
| Match: Q5XGY1 |
score: 500 |
e-value: 2e-140 |
Identity: 37.98% |
Span: 2337bp (90.7%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1 PE=2 SV=1 |
| Match: Q5R434 |
score: 493 |
e-value: 3e-138 |
Identity: 37.91% |
Span: 2337bp (90.7%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii GN=TSR1 PE=2 SV=1 |
| Match: Q2NL82 |
score: 488 |
e-value: 9e-137 |
Identity: 37.53% |
Span: 2337bp (90.7%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens GN=TSR1 PE=1 SV=1 |
| Match: Q5SWD9 |
score: 472 |
e-value: 5e-132 |
Identity: 37.47% |
Span: 2337bp (90.7%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus GN=Tsr1 PE=2 SV=1 |
| Match: Q9VP47 |
score: 466 |
e-value: 3e-130 |
Identity: 35.53% |
Span: 2337bp (90.7%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster GN=CG7338 PE=1 SV=1 |
| Match: Q54YA7 |
score: 430 |
e-value: 3e-119 |
Identity: 32.78% |
Span: 2349bp (91.1%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Dictyostelium discoideum GN=tsr1 PE=3 SV=1 |
| Match: Q19329 |
score: 407 |
e-value: 3e-112 |
Identity: 33.96% |
Span: 2337bp (90.7%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis elegans GN=tag-151 PE=3 SV=1 |
| Match: Q61WR2 |
score: 399 |
e-value: 4e-110 |
Identity: 32.8% |
Span: 2352bp (91.2%) |
Frame: 3 |
| Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis briggsae GN=tag-151 PE=3 SV=1 |
| Match: O13956 |
score: 338 |
e-value: 1e-91 |
Identity: 29.56% |
Span: 2352bp (91.2%) |
Frame: 3 |
| Ribosome biogenesis protein tsr1 homolog OS=Schizosaccharomyces pombe GN=SPAC23H4.15 PE=2 SV=1 |
| Match: Q07381 |
score: 301 |
e-value: 1e-80 |
Identity: 29.21% |
Span: 2331bp (90.4%) |
Frame: 3 |
| Ribosome biogenesis protein TSR1 OS=Saccharomyces cerevisiae GN=TSR1 PE=1 SV=1 |
| Match: O94653 |
score: 97.1 |
e-value: 6e-19 |
Identity: 24.86% |
Span: 1011bp (39.2%) |
Frame: 3 |
| Ribosome biogenesis protein BMS1 homolog OS=Schizosaccharomyces pombe GN=SPBC31E1.06 PE=1 SV=2 |
| Match: Q14692 |
score: 97.1 |
e-value: 6e-19 |
Identity: 24.36% |
Span: 1263bp (49.0%) |
Frame: 3 |
| Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1 |
| Match: Q08965 |
score: 92.8 |
e-value: 1e-17 |
Identity: 23.51% |
Span: 1050bp (40.7%) |
Frame: 3 |
| Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae GN=BMS1 PE=1 SV=1 |
|
