| arabidopsis/peptide [blastx] | Showing best 21 hits recorded |
| Match: At1G20880.1 |
score: 47.4 |
e-value: 3e-11 |
Identity: 52.17% |
Span: 138bp (48.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:7262868-7264823 REVERSE |
| Match: At1G22330.1 |
score: 45.1 |
e-value: 6e-05 |
Identity: 44.23% |
Span: 156bp (55.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:7886682-7887571 FORWARD |
| Match: At1G76460.1 |
score: 44.3 |
e-value: 7e-12 |
Identity: 47.83% |
Span: 138bp (48.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE |
| Match: At1G76460.1 |
score: 43.9 |
e-value: 7e-12 |
Identity: 52.5% |
Span: 120bp (42.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE |
| Match: At1G22910.2 |
score: 42.4 |
e-value: 8e-06 |
Identity: 39.22% |
Span: 153bp (54.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107607 FORWARD |
| Match: At1G78260.2 |
score: 42.4 |
e-value: 6e-08 |
Identity: 42.31% |
Span: 156bp (55.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:29452210-29454139 FORWARD |
| Match: At1G22910.1 |
score: 42.4 |
e-value: 8e-06 |
Identity: 39.22% |
Span: 153bp (54.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107648 FORWARD |
| Match: At1G22910.3 |
score: 42.4 |
e-value: 8e-06 |
Identity: 39.22% |
Span: 153bp (54.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107938 FORWARD |
| Match: At1G78260.1 |
score: 42.4 |
e-value: 6e-08 |
Identity: 42.31% |
Span: 156bp (55.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:29452210-29455074 FORWARD |
| Match: At1G33470.1 |
score: 39.3 |
e-value: 5e-07 |
Identity: 46.67% |
Span: 135bp (47.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
| Match: At1G33470.2 |
score: 39.3 |
e-value: 5e-07 |
Identity: 46.67% |
Span: 135bp (47.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
| Match: At1G20880.1 |
score: 38.5 |
e-value: 3e-11 |
Identity: 40.35% |
Span: 171bp (60.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:7262868-7264823 REVERSE |
| Match: At2G46780.1 |
score: 36.6 |
e-value: 3e-06 |
Identity: 40% |
Span: 135bp (47.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr2:19236586-19238017 FORWARD |
| Match: At1G78260.2 |
score: 32.3 |
e-value: 6e-08 |
Identity: 43.59% |
Span: 117bp (41.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:29452210-29454139 FORWARD |
| Match: At2G46780.1 |
score: 32.3 |
e-value: 3e-06 |
Identity: 34.21% |
Span: 216bp (76.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr2:19236586-19238017 FORWARD |
| Match: At1G33470.1 |
score: 32.3 |
e-value: 5e-07 |
Identity: 52% |
Span: 75bp (26.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
| Match: At1G33470.2 |
score: 32.3 |
e-value: 5e-07 |
Identity: 52% |
Span: 75bp (26.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:12144612-12146020 FORWARD |
| Match: At1G78260.1 |
score: 32.3 |
e-value: 6e-08 |
Identity: 43.59% |
Span: 117bp (41.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:29452210-29455074 FORWARD |
| Match: At1G22910.3 |
score: 25 |
e-value: 8e-06 |
Identity: 38.71% |
Span: 93bp (32.9%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107938 FORWARD |
| Match: At1G22910.1 |
score: 25 |
e-value: 8e-06 |
Identity: 38.71% |
Span: 93bp (32.9%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107648 FORWARD |
| Match: At1G22910.2 |
score: 25 |
e-value: 8e-06 |
Identity: 38.71% |
Span: 93bp (32.9%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:8105797-8107607 FORWARD |
|
| 5 lower scoring hits censored -- only 21 best hits are stored. |
| genbank/nr [blastx] | Showing best 51 hits recorded |
| Match: gi|68073865|ref|XP_678847.1| |
score: 52.4 |
e-value: 3e-05 |
Identity: 46.03% |
Span: 165bp (58.3%) |
Frame: -3 |
| hypothetical |
| Match: gi|68005486|ref|XP_670041.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 83.33% |
Span: 72bp (25.4%) |
Frame: -3 |
| hypothetical |
| Match: gi|67975325|ref|XP_668857.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 83.33% |
Span: 72bp (25.4%) |
Frame: -3 |
| hypothetical |
| Match: gi|23505939|gb|AAN28829.1| |
score: 47.4 |
e-value: 9e-09 |
Identity: 52.17% |
Span: 138bp (48.8%) |
Frame: 2 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|18394923|ref|NP_564127.1| |
score: 47.4 |
e-value: 2e-09 |
Identity: 52.17% |
Span: 138bp (48.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|15010636|gb|AAK73977.1| |
score: 47.4 |
e-value: 9e-09 |
Identity: 52.17% |
Span: 138bp (48.8%) |
Frame: 2 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|4836901|gb|AAD30604.1| |
score: 47.4 |
e-value: 7e-09 |
Identity: 52.17% |
Span: 138bp (48.8%) |
Frame: 2 |
| gi|4836901|gb|AAD30604.1| Unknown protein [Arabidopsis thaliana] |
| Match: gi|51091028|dbj|BAD35670.1| |
score: 46.2 |
e-value: 5e-11 |
Identity: 27.88% |
Span: 297bp (104.9%) |
Frame: 3 |
| gi|51091028|dbj|BAD35670.1| putative SEB4D [Oryza sativa (japonica cultivar-group)] >gi|51090851|dbj|BAD35379.1| puta... |
| Match: gi|92874313|gb|ABE82599.1| |
score: 46.2 |
e-value: 2e-09 |
Identity: 50% |
Span: 138bp (48.8%) |
Frame: 2 |
| RNA-binding |
| Match: gi|51091028|dbj|BAD35670.1| |
score: 45.4 |
e-value: 5e-11 |
Identity: 47.06% |
Span: 153bp (54.1%) |
Frame: 2 |
| gi|51091028|dbj|BAD35670.1| putative SEB4D [Oryza sativa (japonica cultivar-group)] >gi|51090851|dbj|BAD35379.1| puta... |
| Match: gi|22330665|ref|NP_565132.2| |
score: 44.3 |
e-value: 5e-10 |
Identity: 47.83% |
Span: 138bp (48.8%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|12323977|gb|AAG51948.1| |
score: 44.3 |
e-value: 5e-10 |
Identity: 47.83% |
Span: 138bp (48.8%) |
Frame: 2 |
| gi|12323977|gb|AAG51948.1| putative RNA-binding protein; 24808-23340 [Arabidopsis thaliana] >gi|6554473|gb|AAF16655.1... |
| Match: gi|12323977|gb|AAG51948.1| |
score: 43.9 |
e-value: 5e-10 |
Identity: 52.5% |
Span: 120bp (42.4%) |
Frame: 3 |
| gi|12323977|gb|AAG51948.1| putative RNA-binding protein; 24808-23340 [Arabidopsis thaliana] >gi|6554473|gb|AAF16655.1... |
| Match: gi|22330665|ref|NP_565132.2| |
score: 43.9 |
e-value: 5e-10 |
Identity: 52.5% |
Span: 120bp (42.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|51535080|dbj|BAD37669.1| |
score: 43.5 |
e-value: 6e-06 |
Identity: 50% |
Span: 138bp (48.8%) |
Frame: 2 |
| putative |
| Match: gi|42572157|ref|NP_974169.1| |
score: 42.4 |
e-value: 5e-06 |
Identity: 42.31% |
Span: 156bp (55.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi110736924|dbj|BAF00419.1| hypothetical prote... |
| Match: gi|8052542|gb|AAF71806.1| |
score: 42.4 |
e-value: 5e-06 |
Identity: 42.31% |
Span: 156bp (55.1%) |
Frame: 2 |
| gi|8052542|gb|AAF71806.1| F3F9.20 [Arabidopsis thaliana] |
| Match: gi|18411885|ref|NP_565175.1| |
score: 42.4 |
e-value: 5e-06 |
Identity: 42.31% |
Span: 156bp (55.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21537200|gb|AAM61541.1| RNA recognition moti... |
| Match: gi|34907334|ref|NP_915014.1| |
score: 42 |
e-value: 3e-06 |
Identity: 43.48% |
Span: 138bp (48.8%) |
Frame: 2 |
| gi|34907334|ref|NP_915014.1| P0698A10.29 [Oryza sativa (japonica cultivar-group)] gi|20804774|dbj|BAB92459.1| P0698A1... |
| Match: gi|56784856|dbj|BAD82096.1| |
score: 42 |
e-value: 3e-06 |
Identity: 43.48% |
Span: 138bp (48.8%) |
Frame: 2 |
| gi|56784856|dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa (japonica cultivar-group)] >gi|567847... |
| Match: gi|108707149|gb|ABF94944.1| |
score: 40 |
e-value: 5e-05 |
Identity: 41.3% |
Span: 138bp (48.8%) |
Frame: 2 |
| RNA-binding |
| Match: gi|92874313|gb|ABE82599.1| |
score: 40 |
e-value: 2e-09 |
Identity: 31.43% |
Span: 312bp (110.2%) |
Frame: 3 |
| RNA-binding |
| Match: gi|42562492|ref|NP_174613.2| |
score: 39.3 |
e-value: 4e-05 |
Identity: 46.67% |
Span: 135bp (47.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi51970938|dbj|BAD44161.1| unknown protein [Ar... |
| Match: gi|12322386|gb|AAG51218.1| |
score: 39.3 |
e-value: 4e-05 |
Identity: 46.67% |
Span: 135bp (47.7%) |
Frame: 2 |
| gi|12322386|gb|AAG51218.1| RNA-binding protein; 68390-68829 [Arabidopsis thaliana] |
| Match: gi|42571735|ref|NP_973958.1| |
score: 39.3 |
e-value: 4e-05 |
Identity: 46.67% |
Span: 135bp (47.7%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi14532532|gb|AAK63994.1| At1g33470/F10C21_14 ... |
| Match: gi|18394923|ref|NP_564127.1| |
score: 38.5 |
e-value: 2e-09 |
Identity: 40.35% |
Span: 171bp (60.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|49114954|gb|AAH72812.1| |
score: 37.7 |
e-value: 6e-05 |
Identity: 37.8% |
Span: 213bp (75.3%) |
Frame: 3 |
| gi|49114954|gb|AAH72812.1| Unknown (protein for MGC:80153) [Xenopus laevis] |
| Match: gi|61098037|ref|NP_001012881.1| |
score: 37.7 |
e-value: 6e-05 |
Identity: 31.53% |
Span: 300bp (106.0%) |
Frame: 3 |
| RNA |
| Match: gi|38174185|gb|AAH61322.1| |
score: 37.7 |
e-value: 6e-05 |
Identity: 37.8% |
Span: 213bp (75.3%) |
Frame: 3 |
| gi|38174185|gb|AAH61322.1| Unknown (protein for MGC:75808) [Silurana tropicalis] |
| Match: gi|8920429|emb|CAB96420.1| |
score: 37.4 |
e-value: 8e-05 |
Identity: 27.03% |
Span: 402bp (142.0%) |
Frame: 3 |
| gi|8920429|emb|CAB96420.1| hypothetical protein [Xenopus laevis] gi|27924271|gb|AAH44956.1| MGC52530 protein [Xenopus... |
| Match: gi|109504768|ref|XP_001073426.1| |
score: 37 |
e-value: 0.0001 |
Identity: 36.59% |
Span: 213bp (75.3%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|4836901|gb|AAD30604.1| |
score: 37 |
e-value: 7e-09 |
Identity: 38.71% |
Span: 171bp (60.4%) |
Frame: 3 |
| gi|4836901|gb|AAD30604.1| Unknown protein [Arabidopsis thaliana] |
| Match: gi|94395961|ref|XP_982956.1| |
score: 37 |
e-value: 0.0001 |
Identity: 36.59% |
Span: 213bp (75.3%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|23505939|gb|AAN28829.1| |
score: 36.6 |
e-value: 9e-09 |
Identity: 47.5% |
Span: 120bp (42.4%) |
Frame: 3 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|15010636|gb|AAK73977.1| |
score: 36.6 |
e-value: 9e-09 |
Identity: 47.5% |
Span: 120bp (42.4%) |
Frame: 3 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|34907334|ref|NP_915014.1| |
score: 33.5 |
e-value: 3e-06 |
Identity: 51.61% |
Span: 93bp (32.9%) |
Frame: 3 |
| gi|34907334|ref|NP_915014.1| P0698A10.29 [Oryza sativa (japonica cultivar-group)] gi|20804774|dbj|BAB92459.1| P0698A1... |
| Match: gi|56784856|dbj|BAD82096.1| |
score: 33.5 |
e-value: 3e-06 |
Identity: 51.61% |
Span: 93bp (32.9%) |
Frame: 3 |
| gi|56784856|dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa (japonica cultivar-group)] >gi|567847... |
| Match: gi|94395961|ref|XP_982956.1| |
score: 33.1 |
e-value: 0.0001 |
Identity: 37.78% |
Span: 135bp (47.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|8920429|emb|CAB96420.1| |
score: 33.1 |
e-value: 8e-05 |
Identity: 37.78% |
Span: 135bp (47.7%) |
Frame: 2 |
| gi|8920429|emb|CAB96420.1| hypothetical protein [Xenopus laevis] gi|27924271|gb|AAH44956.1| MGC52530 protein [Xenopus... |
| Match: gi|61098037|ref|NP_001012881.1| |
score: 33.1 |
e-value: 6e-05 |
Identity: 37.78% |
Span: 135bp (47.7%) |
Frame: 2 |
| RNA |
| Match: gi|38174185|gb|AAH61322.1| |
score: 33.1 |
e-value: 6e-05 |
Identity: 37.78% |
Span: 135bp (47.7%) |
Frame: 2 |
| gi|38174185|gb|AAH61322.1| Unknown (protein for MGC:75808) [Silurana tropicalis] |
| Match: gi|109504768|ref|XP_001073426.1| |
score: 33.1 |
e-value: 0.0001 |
Identity: 37.78% |
Span: 135bp (47.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|49114954|gb|AAH72812.1| |
score: 33.1 |
e-value: 6e-05 |
Identity: 37.78% |
Span: 135bp (47.7%) |
Frame: 2 |
| gi|49114954|gb|AAH72812.1| Unknown (protein for MGC:80153) [Xenopus laevis] |
| Match: gi|42571735|ref|NP_973958.1| |
score: 32.3 |
e-value: 4e-05 |
Identity: 52% |
Span: 75bp (26.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi14532532|gb|AAK63994.1| At1g33470/F10C21_14 ... |
| Match: gi|8052542|gb|AAF71806.1| |
score: 32.3 |
e-value: 5e-06 |
Identity: 43.59% |
Span: 117bp (41.3%) |
Frame: 3 |
| gi|8052542|gb|AAF71806.1| F3F9.20 [Arabidopsis thaliana] |
| Match: gi|42572157|ref|NP_974169.1| |
score: 32.3 |
e-value: 5e-06 |
Identity: 43.59% |
Span: 117bp (41.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi110736924|dbj|BAF00419.1| hypothetical prote... |
| Match: gi|18411885|ref|NP_565175.1| |
score: 32.3 |
e-value: 5e-06 |
Identity: 43.59% |
Span: 117bp (41.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21537200|gb|AAM61541.1| RNA recognition moti... |
| Match: gi|12322386|gb|AAG51218.1| |
score: 32.3 |
e-value: 4e-05 |
Identity: 52% |
Span: 75bp (26.5%) |
Frame: 3 |
| gi|12322386|gb|AAG51218.1| RNA-binding protein; 68390-68829 [Arabidopsis thaliana] |
| Match: gi|42562492|ref|NP_174613.2| |
score: 32.3 |
e-value: 4e-05 |
Identity: 52% |
Span: 75bp (26.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi51970938|dbj|BAD44161.1| unknown protein [Ar... |
| Match: gi|108707149|gb|ABF94944.1| |
score: 31.2 |
e-value: 5e-05 |
Identity: 36.36% |
Span: 150bp (53.0%) |
Frame: 3 |
| RNA-binding |
| Match: gi|51535080|dbj|BAD37669.1| |
score: 30.8 |
e-value: 6e-06 |
Identity: 28.83% |
Span: 321bp (113.4%) |
Frame: 3 |
| putative |
|
| 116 lower scoring hits censored -- only 51 best hits are stored. |