All Stored BLAST annotations for SGN-U563862
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157354265|emb|CAO46866.1| score: 412 e-value: 9e-113 Identity: 63.88% Span: 1134bp (40.1%) Frame: 3
unnamed
Match: gi|147800057|emb|CAN72659.1| score: 319 e-value: 1e-84 Identity: 55.42% Span: 918bp (32.4%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|157355780|emb|CAO49605.1| score: 317 e-value: 3e-84 Identity: 57.4% Span: 918bp (32.4%) Frame: 3
unnamed
Match: gi|92893882|gb|ABE91932.1| score: 291 e-value: 2e-76 Identity: 50.98% Span: 1107bp (39.1%) Frame: 3
Nonsense-mediated decay UPF3 [Medicago truncatula]
Match: gi|116309808|emb|CAH66847.1| score: 290 e-value: 4e-76 Identity: 46.5% Span: 1131bp (40.0%) Frame: 3
H0525C06.10 [Oryza sativa (indica cultivar-group)] >gi218194905|gb|EEC77332.1| hypothetical protein OsI_16007 [Oryza ...
Match: gi|125590495|gb|EAZ30845.1| score: 287 e-value: 3e-75 Identity: 45% Span: 1131bp (40.0%) Frame: 3
hypothetical
Match: gi|115458546|ref|NP_001052873.1| score: 287 e-value: 3e-75 Identity: 46.25% Span: 1131bp (40.0%) Frame: 3
Os04g0440100 [Oryza sativa (japonica cultivar-group)] >gi113564444|dbj|BAF14787.1| Os04g0440100 [Oryza sativa Japonic...
Match: gi|147773122|emb|CAN62711.1| score: 285 e-value: 1e-74 Identity: 52.11% Span: 918bp (32.4%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|39545659|emb|CAE03133.3| score: 284 e-value: 3e-74 Identity: 44.75% Span: 1131bp (40.0%) Frame: 3
OJ000114_01.14 [Oryza sativa (japonica cultivar-group)]
Match: gi|10086477|gb|AAG12537.1|AC015446_18 score: 280 e-value: 4e-73 Identity: 46.44% Span: 1131bp (40.0%) Frame: 3
Unknown protein [Arabidopsis thaliana]
Match: gi|30692963|ref|NP_174660.2| score: 279 e-value: 9e-73 Identity: 46.44% Span: 1131bp (40.0%) Frame: 3
Smg-4/UPF3 family protein [Arabidopsis thaliana] >gi10092444|gb|AAG12847.1|AC079286_4 unknown protein; 6107-8789 [Ara...
Match: gi|157355785|emb|CAO49610.1| score: 275 e-value: 2e-71 Identity: 50.29% Span: 918bp (32.4%) Frame: 3
unnamed
Match: gi|186488168|ref|NP_001117406.1| score: 273 e-value: 8e-71 Identity: 45.97% Span: 1131bp (40.0%) Frame: 3
Smg-4/UPF3 family protein [Arabidopsis thaliana]
Match: gi|168052934|ref|XP_001778894.1| score: 219 e-value: 1e-54 Identity: 58.15% Span: 537bp (19.0%) Frame: 3
predicted protein [Physcomitrella patens subsp. patens] >gi162669763|gb|EDQ56344.1| predicted protein [Physcomitrella...
Match: gi|144583661|gb|ABP01544.1| score: 209 e-value: 1e-51 Identity: 77.78% Span: 486bp (17.2%) Frame: 3
UPF3 [Nicotiana attenuata]
Match: gi|168003533|ref|XP_001754467.1| score: 127 e-value: 6e-27 Identity: 31.31% Span: 513bp (18.1%) Frame: 3
predicted
Match: gi|169154833|emb|CAQ15001.1| score: 112 e-value: 1e-22 Identity: 38.73% Span: 504bp (17.8%) Frame: 3
novel protein similar to vertebrate UPF3 regulator of nonsense transcripts (yeast) family [Danio rerio]
Match: gi|215505390|gb|EEC14884.1| score: 112 e-value: 1e-22 Identity: 41.21% Span: 489bp (17.3%) Frame: 3
regulator
Match: gi|189523635|ref|XP_694916.3| score: 112 e-value: 1e-22 Identity: 38.73% Span: 504bp (17.8%) Frame: 3
PREDICTED: UPF3 regulator of nonsense transcripts homolog A (yeast) [Danio rerio] >gi229891778|sp|B0S733.2|REN3A_DANR...
Match: gi|66267353|gb|AAH95761.1| score: 110 e-value: 5e-22 Identity: 39.39% Span: 480bp (17.0%) Frame: 3
Upf3a protein [Danio rerio]
Match: gi|156553587|ref|XP_001600224.1| score: 109 e-value: 1e-21 Identity: 37.06% Span: 501bp (17.7%) Frame: 3
PREDICTED:
Match: gi|219447960|ref|XP_002221733.1| score: 108 e-value: 3e-21 Identity: 36.46% Span: 522bp (18.4%) Frame: 3
hypothetical
Match: gi|53136728|emb|CAG32693.1| score: 108 e-value: 4e-21 Identity: 36.46% Span: 528bp (18.7%) Frame: 3
hypothetical
Match: gi|47220145|emb|CAG07286.1| score: 107 e-value: 8e-21 Identity: 38.41% Span: 486bp (17.2%) Frame: 3
gi|47220145|emb|CAG07286.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|73989572|ref|XP_849752.1| score: 107 e-value: 6e-21 Identity: 36.99% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|219420883|ref|XP_002208243.1| score: 107 e-value: 8e-21 Identity: 35.91% Span: 522bp (18.4%) Frame: 3
hypothetical
Match: gi|149637188|ref|XP_001509880.1| score: 106 e-value: 1e-20 Identity: 37.28% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|91076870|ref|XP_974984.1| score: 105 e-value: 2e-20 Identity: 34.3% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|114051045|ref|NP_001040320.1| score: 105 e-value: 2e-20 Identity: 34.07% Span: 540bp (19.1%) Frame: 3
Upf3
Match: gi|149599397|ref|XP_001506340.1| score: 105 e-value: 3e-20 Identity: 36.9% Span: 501bp (17.7%) Frame: 3
PREDICTED:
Match: gi|126342311|ref|XP_001372586.1| score: 104 e-value: 4e-20 Identity: 36.69% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|159465777|ref|XP_001691099.1| score: 104 e-value: 4e-20 Identity: 46.43% Span: 336bp (11.9%) Frame: 3
UPF3
Match: gi|118084366|ref|XP_416933.2| score: 103 e-value: 1e-19 Identity: 36.69% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|47226207|emb|CAG08354.1| score: 103 e-value: 9e-20 Identity: 33.51% Span: 543bp (19.2%) Frame: 3
gi|47226207|emb|CAG08354.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|109132071|ref|XP_001083304.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|119610249|gb|EAW89843.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|115497252|ref|NP_001069879.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|12711674|ref|NP_075386.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
gi|12711674|ref|NP_075386.1| UPF3 regulator of nonsense transcripts homolog B isoform 2 [Homo sapiens] gi|12232324|gb...
Match: gi|74008228|ref|XP_864506.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|74008224|ref|XP_864470.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|193787549|dbj|BAG52755.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
unnamed
Match: gi|109132073|ref|XP_001082692.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|111307687|gb|AAI21018.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|58865890|ref|NP_001012159.1| score: 102 e-value: 3e-19 Identity: 36.09% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|12854641|dbj|BAB30093.1| score: 102 e-value: 1e-19 Identity: 36.09% Span: 504bp (17.8%) Frame: 3
gi|12854641|dbj|BAB30093.1| unnamed protein product [Mus musculus]
Match: gi|109132077|ref|XP_001082951.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|194228242|ref|XP_001915031.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|18375528|ref|NP_542199.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
gi|18375528|ref|NP_542199.1| UPF3 regulator of nonsense transcripts homolog B isoform 1 [Homo sapiens] gi|12620408|gb...
Match: gi|21313164|ref|NP_080200.1| score: 102 e-value: 1e-19 Identity: 36.09% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|74008230|ref|XP_851843.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|111309183|gb|AAI21019.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
UPF3B
Match: gi|109132075|ref|XP_001083072.1| score: 102 e-value: 1e-19 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|126337391|ref|XP_001373291.1| score: 101 e-value: 3e-19 Identity: 35.93% Span: 498bp (17.6%) Frame: 3
PREDICTED:
Match: gi|209529640|ref|NP_001129345.1| score: 101 e-value: 4e-19 Identity: 36.47% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|74959788|ref|NP_080849.1| score: 101 e-value: 4e-19 Identity: 36.47% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|12860428|dbj|BAB31954.1| score: 101 e-value: 4e-19 Identity: 36.47% Span: 504bp (17.8%) Frame: 3
gi|12860428|dbj|BAB31954.1| unnamed protein product [Mus musculus]
Match: gi|12620406|gb|AAG60690.1|AF318575_1 score: 101 e-value: 4e-19 Identity: 35.5% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|148697043|gb|EDL28990.1| score: 101 e-value: 4e-19 Identity: 36.47% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|149060022|gb|EDM10838.1| score: 101 e-value: 4e-19 Identity: 36.47% Span: 504bp (17.8%) Frame: 3
UPF3
Match: gi|12711676|ref|NP_075387.1| score: 101 e-value: 4e-19 Identity: 35.5% Span: 504bp (17.8%) Frame: 3
gi|12711676|ref|NP_075387.1| UPF3 regulator of nonsense transcripts homolog A isoform hUpf3p [Homo sapiens] gi|122323...
Match: gi|165971526|gb|AAI58354.1| score: 100 e-value: 1e-18 Identity: 34.91% Span: 504bp (17.8%) Frame: 3
Upf3b
Match: gi|67971906|dbj|BAE02295.1| score: 100 e-value: 1e-18 Identity: 34.91% Span: 504bp (17.8%) Frame: 3
unnamed
Match: gi|110760022|ref|XP_624605.2| score: 100 e-value: 6e-19 Identity: 34.68% Span: 501bp (17.7%) Frame: 3
PREDICTED:
Match: gi|41055672|ref|NP_957248.1| score: 100 e-value: 1e-18 Identity: 35.8% Span: 480bp (17.0%) Frame: 3
gi|41055672|ref|NP_957248.1| similar to UPF3 regulator of nonsense transcripts homolog B [Danio rerio] >gi|33416419|g...
Match: gi|115692529|ref|XP_780145.2| score: 99 e-value: 2e-18 Identity: 37.28% Span: 504bp (17.8%) Frame: 3
PREDICTED:
Match: gi|194222085|ref|XP_001499122.2| score: 98.2 e-value: 4e-18 Identity: 32.95% Span: 516bp (18.2%) Frame: 3
PREDICTED:
Match: gi|147777847|emb|CAN60293.1| score: 98.2 e-value: 4e-18 Identity: 61.62% Span: 285bp (10.1%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|26328937|dbj|BAC28207.1| score: 93.2 e-value: 1e-16 Identity: 40% Span: 357bp (12.6%) Frame: 3
gi|26328937|dbj|BAC28207.1| unnamed protein product [Mus musculus]
Match: gi|119629654|gb|EAX09249.1| score: 92.8 e-value: 2e-16 Identity: 40.17% Span: 348bp (12.3%) Frame: 3
UPF3
Match: gi|157137885|ref|XP_001664060.1| score: 92.8 e-value: 2e-16 Identity: 31.44% Span: 543bp (19.2%) Frame: 3
hypothetical
Match: gi|218717508|gb|EED16929.1| score: 92.8 e-value: 2e-16 Identity: 32.84% Span: 561bp (19.8%) Frame: 3
nonsense-mediated
Match: gi|198421280|ref|XP_002130416.1| score: 92.4 e-value: 2e-16 Identity: 30.6% Span: 546bp (19.3%) Frame: 3
PREDICTED:
Match: gi|212507850|gb|EEB11712.1| score: 91.7 e-value: 3e-16 Identity: 30.32% Span: 552bp (19.5%) Frame: 3
Regulator
Match: gi|167535258|ref|XP_001749303.1| score: 91.3 e-value: 4e-16 Identity: 32.07% Span: 540bp (19.1%) Frame: 3
hypothetical
Match: gi|170038524|ref|XP_001847099.1| score: 90.9 e-value: 6e-16 Identity: 32.8% Span: 549bp (19.4%) Frame: 3
conserved
Match: gi|119472065|ref|XP_001258263.1| score: 90.5 e-value: 8e-16 Identity: 32.8% Span: 525bp (18.6%) Frame: 3
nonsense-mediated
Match: gi|157354265|emb|CAO46866.1| score: 89.7 e-value: 1e-15 Identity: 53.93% Span: 249bp (8.8%) Frame: 2
unnamed
Match: gi|194754295|ref|XP_001959431.1| score: 89 e-value: 2e-15 Identity: 33.16% Span: 519bp (18.3%) Frame: 3
GF12056
Match: gi|170095539|ref|XP_001878990.1| score: 89 e-value: 2e-15 Identity: 30.32% Span: 549bp (19.4%) Frame: 3
predicted
Match: gi|212539920|ref|XP_002150115.1| score: 88.6 e-value: 3e-15 Identity: 32.28% Span: 522bp (18.4%) Frame: 3
nonsense-mediated
Match: gi|195122768|ref|XP_002005883.1| score: 88.6 e-value: 3e-15 Identity: 33.14% Span: 477bp (16.9%) Frame: 3
GI18844
Match: gi|193610839|ref|XP_001942591.1| score: 88.6 e-value: 3e-15 Identity: 32.95% Span: 501bp (17.7%) Frame: 3
PREDICTED:
Match: gi|145606999|ref|XP_361438.2| score: 88.2 e-value: 4e-15 Identity: 30.6% Span: 525bp (18.6%) Frame: 3
hypothetical
Match: gi|158296237|ref|XP_316679.4| score: 87.8 e-value: 5e-15 Identity: 28.72% Span: 543bp (19.2%) Frame: 3
AGAP006649-PA
Match: gi|115397199|ref|XP_001214191.1| score: 87.8 e-value: 5e-15 Identity: 31.09% Span: 537bp (19.0%) Frame: 3
conserved
Match: gi|17863070|gb|AAL40012.1| score: 87.4 e-value: 6e-15 Identity: 31.25% Span: 525bp (18.6%) Frame: 3
gi|17863070|gb|AAL40012.1| SD10857p [Drosophila melanogaster]
Match: gi|40882583|gb|AAR96203.1| score: 87.4 e-value: 6e-15 Identity: 31.25% Span: 525bp (18.6%) Frame: 3
gi|40882583|gb|AAR96203.1| AT18503p [Drosophila melanogaster]
Match: gi|116200009|ref|XP_001225816.1| score: 87.4 e-value: 6e-15 Identity: 29.56% Span: 555bp (19.6%) Frame: 3
hypothetical
Match: gi|24762428|ref|NP_611844.2| score: 87.4 e-value: 6e-15 Identity: 31.25% Span: 525bp (18.6%) Frame: 3
gi|24762428|ref|NP_611844.2| CG11184-PC [Drosophila melanogaster] gi|23240140|gb|AAM68275.2| CG11184-PC [Drosophila m...
Match: gi|24762426|ref|NP_726375.1| score: 87.4 e-value: 6e-15 Identity: 31.25% Span: 525bp (18.6%) Frame: 3
gi|24762426|ref|NP_726375.1| CG11184-PB [Drosophila melanogaster] gi|21626676|gb|AAF47091.2| CG11184-PB [Drosophila m...
Match: gi|121699958|ref|XP_001268244.1| score: 87 e-value: 8e-15 Identity: 30.65% Span: 546bp (19.3%) Frame: 3
nonsense-mediated
Match: gi|70992361|ref|XP_751029.1| score: 86.7 e-value: 1e-14 Identity: 30.69% Span: 525bp (18.6%) Frame: 3
hypothetical
Match: gi|159124599|gb|EDP49717.1| score: 86.7 e-value: 1e-14 Identity: 30.69% Span: 525bp (18.6%) Frame: 3
nonsense-mediated
Match: gi|195489365|ref|XP_002092707.1| score: 86.3 e-value: 1e-14 Identity: 31.31% Span: 525bp (18.6%) Frame: 3
GE11515
Match: gi|195382487|ref|XP_002049961.1| score: 85.5 e-value: 2e-14 Identity: 33.14% Span: 477bp (16.9%) Frame: 3
GJ21877
Match: gi|109121391|ref|XP_001107426.1| score: 85.1 e-value: 3e-14 Identity: 37.1% Span: 369bp (13.0%) Frame: 3
PREDICTED:
Match: gi|169862567|ref|XP_001837910.1| score: 85.1 e-value: 3e-14 Identity: 30.34% Span: 522bp (18.4%) Frame: 3
predicted
Match: gi|114692499|ref|XP_509755.2| score: 84 e-value: 7e-14 Identity: 37.1% Span: 369bp (13.0%) Frame: 3
PREDICTED:
Match: gi|211962414|gb|EEA97609.1| score: 84 e-value: 7e-14 Identity: 39.17% Span: 351bp (12.4%) Frame: 3
smg-4/UPF3
Match: gi|195347253|ref|XP_002040168.1| score: 83.6 e-value: 9e-14 Identity: 30.73% Span: 525bp (18.6%) Frame: 3
GM15496

24 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 1 hits recorded
Match: At1G33980.1 score: 279 e-value: 6e-75 Identity: 46.44% Span: 1131bp (40.0%) Frame: 3
Symbols: ATUPF3, UPF3 | ATUPF3/UPF3; nucleotide binding | chr1:12351699-12354381 FORWARD

swissprot [blastx] Showing best 3 hits recorded
Match: Q9BZI7 score: 102 e-value: 9e-21 Identity: 37.06% Span: 504bp (17.8%) Frame: 3
Regulator of nonsense transcripts 3B OS=Homo sapiens GN=UPF3B PE=1 SV=1
Match: Q9H1J1 score: 101 e-value: 3e-20 Identity: 35.5% Span: 504bp (17.8%) Frame: 3
Regulator of nonsense transcripts 3A OS=Homo sapiens GN=UPF3A PE=1 SV=1
Match: Q10267 score: 77.4 e-value: 4e-13 Identity: 28.14% Span: 483bp (17.1%) Frame: 3
Uncharacterized protein C13G7.03 OS=Schizosaccharomyces pombe GN=SPAC13G7.03 PE=2 SV=1