| genbank/nr [blastx] | Showing best 54 hits recorded |
| Match: gi|34394721|dbj|BAC84084.1| |
score: 102.8 |
e-value: 1.1e-21 |
Identity: 54.37% |
Span: 306bp (95.9%) |
Frame: 2 |
| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] |
| Match: gi|15227191|ref|NP_179232.1| |
score: 86.66 |
e-value: 8.4e-17 |
Identity: 48.04% |
Span: 303bp (95.0%) |
Frame: 2 |
| DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabi... |
| Match: gi|34902568|ref|NP_912630.1| |
score: 80.11 |
e-value: 7.9e-15 |
Identity: 41.75% |
Span: 303bp (95.0%) |
Frame: 2 |
| gi|34902568|ref|NP_912630.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|20219037|gb|AAM15781.1|... |
| Match: gi|15226547|ref|NP_179740.1| |
score: 79.72 |
e-value: 1e-14 |
Identity: 43.4% |
Span: 306bp (95.9%) |
Frame: 2 |
| gi|15226547|ref|NP_179740.1| SNF2domain/helicase domain-containing protein [Arabidopsis thaliana] gi|25412041|pir||D8... |
| Match: gi|15232097|ref|NP_189770.1| |
score: 53.53 |
e-value: 7.9e-07 |
Identity: 42.42% |
Span: 195bp (61.1%) |
Frame: 2 |
| gi|15232097|ref|NP_189770.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|22331451|ref|NP_683620.1| |
score: 51.99 |
e-value: 2.3e-06 |
Identity: 40.91% |
Span: 195bp (61.1%) |
Frame: 2 |
| gi|22331451|ref|NP_683620.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|31202135|ref|XP_310015.1| |
score: 51.6 |
e-value: 3e-06 |
Identity: 40.54% |
Span: 198bp (62.1%) |
Frame: 2 |
| gi|31202135|ref|XP_310015.1| ENSANGP00000015114 [Anopheles gambiae] gi|21293606|gb|EAA05751.1| ENSANGP00000015114 [An... |
| Match: gi|15224664|ref|NP_180074.1| |
score: 51.6 |
e-value: 3e-06 |
Identity: 40.91% |
Span: 195bp (61.1%) |
Frame: 2 |
| gi|15224664|ref|NP_180074.1| hypothetical protein [Arabidopsis thaliana] gi|25412271|pir||C84643 hypothetical protein... |
| Match: gi|15231969|ref|NP_189731.1| |
score: 51.22 |
e-value: 3.9e-06 |
Identity: 37.65% |
Span: 246bp (77.1%) |
Frame: 2 |
| gi|15231969|ref|NP_189731.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|8778726|gb|AAF79734.1| |
score: 51.22 |
e-value: 3.9e-06 |
Identity: 37.5% |
Span: 222bp (69.6%) |
Frame: 2 |
| gi|8778726|gb|AAF79734.1| T25N20.14 [Arabidopsis thaliana] |
| Match: gi|15220523|ref|NP_172039.1| |
score: 45.44 |
e-value: 0.00021 |
Identity: 44.07% |
Span: 135bp (42.3%) |
Frame: 2 |
| gi|15220523|ref|NP_172039.1| SNF2domain/helicase domain-containing protein [Arabidopsis thaliana] |
| Match: gi|15230098|ref|NP_189077.1| |
score: 44.28 |
e-value: 0.00048 |
Identity: 31.65% |
Span: 198bp (62.1%) |
Frame: 2 |
| chr40 (chromatin remodeling 40); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] >g... |
| Match: gi|15229135|ref|NP_189853.1| |
score: 44.28 |
e-value: 0.00048 |
Identity: 36.51% |
Span: 153bp (48.0%) |
Frame: 2 |
| CHR38 (CHROMATIN REMODELING 38); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] >g... |
| Match: gi|7485004|pir||T00713 |
score: 43.9 |
e-value: 0.00062 |
Identity: 43.64% |
Span: 138bp (43.3%) |
Frame: 2 |
| gi|7485004|pir||T00713 helicase homolog F22O13.8 - Arabidopsis thaliana |
| Match: gi|14140291|gb|AAK54297.1| |
score: 43.9 |
e-value: 0.00062 |
Identity: 43.64% |
Span: 138bp (43.3%) |
Frame: 2 |
| gi|14140291|gb|AAK54297.1| putative helicase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|17538806|ref|NP_501545.1| |
score: 43.9 |
e-value: 0.00062 |
Identity: 35.11% |
Span: 243bp (76.2%) |
Frame: 2 |
| gi|17538806|ref|NP_501545.1| steroid receptor-interacting SNF2 domain protein (146.2 kD) (4J665) [Caenorhabditis eleg... |
| Match: gi|25407048|pir||F86218 |
score: 43.9 |
e-value: 0.00062 |
Identity: 43.64% |
Span: 138bp (43.3%) |
Frame: 2 |
| gi|25407048|pir||F86218 protein F22O13.8 [imported] - Arabidopsis thaliana gi|9802554|gb|AAF99756.1| F22O13.8 [Arabid... |
| Match: gi|15223265|ref|NP_172336.1| |
score: 43.9 |
e-value: 0.00062 |
Identity: 43.64% |
Span: 138bp (43.3%) |
Frame: 2 |
| gi|15223265|ref|NP_172336.1| SNF2domain/helicase domain-containing protein [Arabidopsis thaliana] |
| Match: gi|15241352|ref|NP_197542.1| |
score: 42.74 |
e-value: 0.001 |
Identity: 34.92% |
Span: 153bp (48.0%) |
Frame: 2 |
| CHR42 (chromatin remodeling 42); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] |
| Match: gi|34898216|ref|NP_910454.1| |
score: 42.36 |
e-value: 0.002 |
Identity: 40.74% |
Span: 126bp (39.5%) |
Frame: 2 |
| gi|34898216|ref|NP_910454.1| putative DNA repair protein rhp54 (RAD54 homolog) [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33146888|dbj|BAC79886.1| |
score: 42.36 |
e-value: 0.002 |
Identity: 40.74% |
Span: 126bp (39.5%) |
Frame: 2 |
| putative DNA repair protein rhp54 [Oryza sativa Japonica Group] |
| Match: gi|28277288|gb|AAH44266.1| |
score: 40.82 |
e-value: 0.005 |
Identity: 40% |
Span: 156bp (48.9%) |
Frame: 2 |
| gi|28277288|gb|AAH44266.1| Similar to steroid receptor-interacting SNF2 domain protein [Xenopus laevis] |
| Match: gi|24762566|ref|NP_611885.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 35.59% |
Span: 153bp (48.0%) |
Frame: 2 |
| gi|24762566|ref|NP_611885.1| CG4049-PA [Drosophila melanogaster] gi|7291744|gb|AAF47165.1| CG4049-PA [Drosophila mela... |
| Match: gi|32411129|ref|XP_326045.1| |
score: 39.66 |
e-value: 0.012 |
Identity: 33.87% |
Span: 177bp (55.5%) |
Frame: 2 |
| gi|32411129|ref|XP_326045.1| hypothetical protein [Neurospora crassa] gi|28924649|gb|EAA33766.1| hypothetical protein... |
| Match: gi|37535026|ref|NP_921815.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 40.68% |
Span: 150bp (47.0%) |
Frame: 2 |
| gi|37535026|ref|NP_921815.1| putative zinc finger helicase [Oryza sativa (japonica cultivar-group)] gi|31432472|gb|AA... |
| Match: gi|34865881|ref|XP_343472.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 40% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|34865881|ref|XP_343472.1| similar to steroid receptor-interacting SNF2 domain protein [Rattus norvegicus] |
| Match: gi|20521664|dbj|BAA34529.2| |
score: 38.89 |
e-value: 0.02 |
Identity: 40% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|20521664|dbj|BAA34529.2| KIAA0809 protein [Homo sapiens] |
| Match: gi|24307995|ref|NP_055921.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 40% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|24307995|ref|NP_055921.1| KIAA0809 protein; likely ortholog of mouse steroid receptor-interacting SNF2 domain prot... |
| Match: gi|13507688|ref|NP_109655.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 40% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|13507688|ref|NP_109655.1| steroid receptor-interacting SNF2 domain protein [Mus musculus] gi|12331285|emb|CAC24703... |
| Match: gi|23396512|sp|Q9HCK8|CHDB_HUMAN |
score: 38.12 |
e-value: 0.034 |
Identity: 40.43% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|23396512|sp|Q9HCK8|CHDB_HUMAN Chromodomain-helicase-DNA-binding protein HELSNF1 (Helicase with SNF2 domain 1) |
| Match: gi|38076154|ref|XP_127726.5| |
score: 38.12 |
e-value: 0.034 |
Identity: 40.43% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|38076154|ref|XP_127726.5| helicase with SNF2 domain 1 [Mus musculus] |
| Match: gi|34328020|dbj|BAB13390.3| |
score: 38.12 |
e-value: 0.034 |
Identity: 40.43% |
Span: 141bp (44.2%) |
Frame: 2 |
| gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens] |
| Match: gi|11877270|emb|CAC18960.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|11877270|emb|CAC18960.1| dJ875J14.1 (alpha thalassemia/mental retardation syndrome X-linked (RAD54 (S. cerevisiae)... |
| Match: gi|1778351|gb|AAB40698.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|1778351|gb|AAB40698.1| putative DNA dependent ATPase and helicase [Homo sapiens] |
| Match: gi|2306809|gb|AAC51657.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|2306809|gb|AAC51657.1| X-linked nuclear protein [Homo sapiens] |
| Match: gi|20336207|ref|NP_612115.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|20336207|ref|NP_612115.1| transcriptional regulator ATRX isoform 3; RAD54 (Saccharomyces cerevisiae); DNA dependen... |
| Match: gi|34881163|ref|XP_217570.2| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|34881163|ref|XP_217570.2| similar to ATRX protein [Rattus norvegicus] |
| Match: gi|20336209|ref|NP_000480.2| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|20336209|ref|NP_000480.2| transcriptional regulator ATRX isoform 1; RAD54 (Saccharomyces cerevisiae); DNA dependen... |
| Match: gi|33354055|dbj|BAC81111.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|33354055|dbj|BAC81111.1| ATRX [Pan troglodytes] |
| Match: gi|17380440|sp|P46100|ATRX_HUMAN |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|17380440|sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX (X-linked helicase II) (X-linked nuclear protein) (XN... |
| Match: gi|33354053|dbj|BAC81110.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|33354053|dbj|BAC81110.1| ATRX [Homo sapiens] |
| Match: gi|33354057|dbj|BAC81112.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|33354057|dbj|BAC81112.1| ATRX [Pongo pygmaeus] |
| Match: gi|2136369|pir||I54367 |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|2136369|pir||I54367 X-linked nuclear protein - human gi|530788|gb|AAA20872.1| X-linked nuclear protein gi|1588601|... |
| Match: gi|7512482|pir||I38614 |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|7512482|pir||I38614 helicase II - human gi|606833|gb|AAC50069.1| helicase II |
| Match: gi|1778352|gb|AAB40699.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|1778352|gb|AAB40699.1| putative DNA dependent ATPase and helicase [Homo sapiens] |
| Match: gi|20336205|ref|NP_612114.1| |
score: 37.74 |
e-value: 0.045 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|20336205|ref|NP_612114.1| transcriptional regulator ATRX isoform 2; RAD54 (Saccharomyces cerevisiae); DNA dependen... |
| Match: gi|38110812|gb|EAA56476.1| |
score: 36.96 |
e-value: 0.076 |
Identity: 37.78% |
Span: 129bp (40.4%) |
Frame: 2 |
| gi|38110812|gb|EAA56476.1| hypothetical protein MG06447.4 [Magnaporthe grisea 70-15] |
| Match: gi|31198707|ref|XP_308301.1| |
score: 36.96 |
e-value: 0.076 |
Identity: 31.25% |
Span: 168bp (52.7%) |
Frame: 2 |
| gi|31198707|ref|XP_308301.1| ENSANGP00000010721 [Anopheles gambiae] gi|30178657|gb|EAA04733.2| ENSANGP00000010721 [An... |
| Match: gi|34866132|ref|XP_232671.2| |
score: 36.58 |
e-value: 0.1 |
Identity: 33.33% |
Span: 180bp (56.4%) |
Frame: 2 |
| gi|34866132|ref|XP_232671.2| similar to Probable chromodomain-helicase-DNA-binding protein KIAA1416 [Rattus norvegicus] |
| Match: gi|6678609|ref|NP_033556.1| |
score: 36.58 |
e-value: 0.1 |
Identity: 27.78% |
Span: 237bp (74.3%) |
Frame: 2 |
| gi|6678609|ref|NP_033556.1| alpha thalassemia/mental retardation syndrome X-linked homolog; X-linked nuclear protein;... |
| Match: gi|37556014|ref|XP_098762.4| |
score: 36.58 |
e-value: 0.1 |
Identity: 33.33% |
Span: 180bp (56.4%) |
Frame: 2 |
| gi|37556014|ref|XP_098762.4| similar to Probable chromodomain-helicase-DNA-binding protein KIAA1416 [Homo sapiens] |
| Match: gi|38078060|ref|XP_149413.3| |
score: 36.58 |
e-value: 0.1 |
Identity: 33.33% |
Span: 180bp (56.4%) |
Frame: 2 |
| gi|38078060|ref|XP_149413.3| RIKEN cDNA A730019I05 gene [Mus musculus] |
| Match: gi|23396522|sp|Q9P2D1|CHDA_HUMAN |
score: 36.58 |
e-value: 0.1 |
Identity: 33.33% |
Span: 180bp (56.4%) |
Frame: 2 |
| gi|23396522|sp|Q9P2D1|CHDA_HUMAN Probable chromodomain-helicase-DNA-binding protein KIAA1416 gi|7243213|dbj|BAA92654.... |
| Match: gi|7020408|dbj|BAA91116.1| |
score: 36.58 |
e-value: 0.1 |
Identity: 33.33% |
Span: 180bp (56.4%) |
Frame: 2 |
| gi|7020408|dbj|BAA91116.1| unnamed protein product [Homo sapiens] |
|
| arabidopsis/peptide [blastx] | Showing best 14 hits recorded |
| Match: At2g16390.1 |
score: 86.66 |
e-value: 2.2e-18 |
Identity: 48.04% |
Span: 303bp (95.0%) |
Frame: 2 |
| At2g16390.1 68409.m01688 SNF2 domain/helicase domain-containing protein low similarity to RAD54 [Drosophila melanogas... |
| Match: At2g21450.1 |
score: 79.72 |
e-value: 2.7e-16 |
Identity: 43.4% |
Span: 306bp (95.9%) |
Frame: 2 |
| At2g21450.1 68409.m02311 SNF2domain/helicase domain-containing protein low similarity to SP|Q61687 Transcriptional re... |
| Match: At3g32280.1 |
score: 53.53 |
e-value: 2e-08 |
Identity: 42.42% |
Span: 195bp (61.1%) |
Frame: 2 |
| At3g32280.1 68410.m03800 hypothetical protein similar to hypothetical protein GB:AAD23011 GI:4559350 from [Arabidopsi... |
| Match: At3g32330.1 |
score: 51.99 |
e-value: 5.9e-08 |
Identity: 40.91% |
Span: 195bp (61.1%) |
Frame: 2 |
| At3g32330.1 68410.m03809 hypothetical protein |
| Match: At2g25020.1 |
score: 51.6 |
e-value: 7.7e-08 |
Identity: 40.91% |
Span: 195bp (61.1%) |
Frame: 2 |
| At2g25020.1 68409.m02708 hypothetical protein |
| Match: At3g31900.1 |
score: 51.22 |
e-value: 1e-07 |
Identity: 37.65% |
Span: 246bp (77.1%) |
Frame: 2 |
| At3g31900.1 68410.m03720 hypothetical protein |
| Match: At1g05480.1 |
score: 45.44 |
e-value: 5.5e-06 |
Identity: 44.07% |
Span: 135bp (42.3%) |
Frame: 2 |
| At1g05480.1 68408.m00506 SNF2domain/helicase domain-containing protein low similarity to SP|Q9U7E0 Transcriptional re... |
| Match: At3g42670.1 |
score: 44.28 |
e-value: 1.2e-05 |
Identity: 36.51% |
Span: 153bp (48.0%) |
Frame: 2 |
| At3g42670.1 68410.m04115 SNF2domain/helicase domain-containing protein low similarity to SP|P41410 DNA repair protein... |
| Match: At3g24340.1 |
score: 44.28 |
e-value: 1.2e-05 |
Identity: 31.65% |
Span: 198bp (62.1%) |
Frame: 2 |
| At3g24340.1 68410.m02789 SNF2domain/helicase domain-containing protein similar to SP|P41410 DNA repair protein rhp54 ... |
| Match: At1g08600.1 |
score: 43.9 |
e-value: 1.6e-05 |
Identity: 43.64% |
Span: 138bp (43.3%) |
Frame: 2 |
| At1g08600.1 68408.m00860 SNF2domain/helicase domain-containing protein similar to SP|P46100 Transcriptional regulator... |
| Match: At5g20420.1 |
score: 42.74 |
e-value: 3.6e-05 |
Identity: 34.92% |
Span: 153bp (48.0%) |
Frame: 2 |
| At5g20420.1 68412.m02225 SNF2domain/helicase domain-containing protein low similarity to SP|Q9U7E0 Transcriptional re... |
| Match: At3g19210.1 |
score: 35.81 |
e-value: 0.004 |
Identity: 32.81% |
Span: 177bp (55.5%) |
Frame: 2 |
| At3g19210.1 68410.m02201 DNA repair protein RAD54, putative similar to RAD54 GB:CAA71278 from [Drosophila melanogaste... |
| Match: At3g32280.1 |
score: 33.88 |
e-value: 0.017 |
Identity: 34.62% |
Span: 153bp (48.0%) |
Frame: 2 |
| At3g32280.1 68410.m03800 hypothetical protein similar to hypothetical protein GB:AAD23011 GI:4559350 from [Arabidopsi... |
| Match: At5g63950.1 |
score: 32.73 |
e-value: 0.037 |
Identity: 29.9% |
Span: 285bp (89.3%) |
Frame: 2 |
| At5g63950.1 68412.m07265 SNF2domain/helicase domain-containing protein low similarity to SP|Q03468 Excision repair pr... |
|
