| arabidopsis/peptide [blastx] | Showing best 31 hits recorded |
| Match: At3G61860.1 |
score: 138 |
e-value: 6e-34 |
Identity: 76.83% |
Span: 246bp (77.1%) |
Frame: 2 |
| Symbols: RSP31, ATRSP31 | ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding | chr3:22911286-22913134 RE... |
| Match: At2G46610.1 |
score: 118 |
e-value: 9e-28 |
Identity: 66.67% |
Span: 243bp (76.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19145563 REVERSE |
| Match: At5G52040.2 |
score: 110 |
e-value: 2e-25 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At5G52040.1 |
score: 110 |
e-value: 2e-25 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| Symbols: ATRSP41 | ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding | chr5:211483... |
| Match: At4G25500.1 |
score: 109 |
e-value: 3e-25 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At2G46610.2 |
score: 71.6 |
e-value: 9e-14 |
Identity: 64.81% |
Span: 153bp (48.0%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative | chr2:19143840-19144929 REVERSE |
| Match: At1G02840.1 |
score: 67.4 |
e-value: 2e-12 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At1G02840.2 |
score: 67.4 |
e-value: 2e-12 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-628995 FORWARD |
| Match: At1G02840.3 |
score: 67.4 |
e-value: 2e-12 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| Symbols: ATSRP34, SRP34, SR1 | SR1 (splicing factor 2); RNA binding | chr1:626918-629583 FORWARD |
| Match: At4G02430.2 |
score: 66.6 |
e-value: 3e-12 |
Identity: 45.88% |
Span: 240bp (75.2%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1071313 FORWARD |
| Match: At4G02430.1 |
score: 66.6 |
e-value: 3e-12 |
Identity: 45.88% |
Span: 240bp (75.2%) |
Frame: 2 |
| pre-mRNA splicing factor, putative / SR1 protein, putative | chr4:1069186-1070543 FORWARD |
| Match: At2G37340.1 |
score: 64.7 |
e-value: 1e-11 |
Identity: 46.15% |
Span: 234bp (73.4%) |
Frame: 2 |
| Symbols: ATRSZ33, RSZ33 | RSZ33 (Arginine/serine-rich Zinc knuckle-containing protein 33); nucleic acid binding / nu... |
| Match: At3G53500.2 |
score: 63.5 |
e-value: 3e-11 |
Identity: 45.57% |
Span: 237bp (74.3%) |
Frame: 2 |
| Symbols: RSZ32 | RSZ32; nucleic acid binding | chr3:19845535-19847485 REVERSE |
| Match: At1G09140.1 |
score: 62.4 |
e-value: 6e-11 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At1G09140.2 |
score: 62.4 |
e-value: 6e-11 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| Symbols: ATSRP30, ATSRP30.1, ATSRP30.2 | ATSRP30.1 (ARABIDOPSIS THALIANA SERINE/ARGININE PROTEIN 30.1); RNA binding ... |
| Match: At3G49430.1 |
score: 60.1 |
e-value: 3e-10 |
Identity: 43.02% |
Span: 243bp (76.2%) |
Frame: 2 |
| Symbols: SRP34A | SRP34A (SER/ARG-RICH PROTEIN 34A); RNA binding | chr3:18343653-18345814 FORWARD |
| Match: At4G25500.2 |
score: 47 |
e-value: 2e-06 |
Identity: 64.71% |
Span: 102bp (32.0%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At3G11400.1 |
score: 47 |
e-value: 2e-06 |
Identity: 40% |
Span: 201bp (63.0%) |
Frame: 2 |
| Symbols: ATEIF3G1, EIF3G1 | EIF3G1 (eukaryotic translation initiation factor 3G1); RNA binding / translation initiat... |
| Match: At3G19130.1 |
score: 45.4 |
e-value: 7e-06 |
Identity: 33.33% |
Span: 237bp (74.3%) |
Frame: 2 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At5G06000.1 |
score: 44.3 |
e-value: 2e-05 |
Identity: 37.33% |
Span: 201bp (63.0%) |
Frame: 2 |
| Symbols: ATEIF3G2, EIF3G2 | EIF3G2 (eukaryotic translation initiation factor 3G2); RNA binding / translation initiat... |
| Match: At1G60650.1 |
score: 43.9 |
e-value: 2e-05 |
Identity: 30.86% |
Span: 219bp (68.7%) |
Frame: 2 |
| glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
| Match: At4G31580.1 |
score: 43.9 |
e-value: 2e-05 |
Identity: 40.68% |
Span: 168bp (52.7%) |
Frame: 2 |
| Symbols: RSZP22, SRZ-22 | SRZ-22 (serine/arginine-rich 22) | chr4:15306989-15308070 FORWARD |
| Match: At1G60650.2 |
score: 43.9 |
e-value: 2e-05 |
Identity: 30.86% |
Span: 219bp (68.7%) |
Frame: 2 |
| glycine-rich RNA-binding protein, putative | chr1:22343754-22345813 FORWARD |
| Match: At1G23860.2 |
score: 43.5 |
e-value: 3e-05 |
Identity: 38.98% |
Span: 168bp (52.7%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At1G23860.1 |
score: 43.5 |
e-value: 3e-05 |
Identity: 38.98% |
Span: 168bp (52.7%) |
Frame: 2 |
| Symbols: RSZP21, SRZ21, SRZ-21 | SRZ-21 | chr1:8428080-8429153 REVERSE |
| Match: At4G25500.2 |
score: 42.4 |
e-value: 6e-05 |
Identity: 38.27% |
Span: 231bp (72.4%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At4G25500.1 |
score: 42.4 |
e-value: 6e-05 |
Identity: 38.27% |
Span: 231bp (72.4%) |
Frame: 2 |
| Symbols: ATRSP40, AT-SRP40, ATRSP35 | ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA bi... |
| Match: At2G24590.1 |
score: 42.4 |
e-value: 6e-05 |
Identity: 40.68% |
Span: 168bp (52.7%) |
Frame: 2 |
| splicing factor, putative | chr2:10456916-10457939 FORWARD |
| Match: At5G19960.1 |
score: 42 |
e-value: 8e-05 |
Identity: 30.12% |
Span: 228bp (71.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:6744031-6746135 FORWARD |
| Match: At1G55310.1 |
score: 41.2 |
e-value: 0.0001 |
Identity: 31.4% |
Span: 234bp (73.4%) |
Frame: 2 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At1G55310.2 |
score: 41.2 |
e-value: 0.0001 |
Identity: 31.4% |
Span: 234bp (73.4%) |
Frame: 2 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
|
| 77 lower scoring hits censored -- only 31 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|18412169|ref|NP_567120.1| |
score: 138 |
e-value: 7e-32 |
Identity: 76.83% |
Span: 246bp (77.1%) |
Frame: 2 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|6899884|emb|CAB71893.1| |
score: 138 |
e-value: 7e-32 |
Identity: 76.83% |
Span: 246bp (77.1%) |
Frame: 2 |
| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana] |
| Match: gi|1707366|emb|CAA67798.1| |
score: 137 |
e-value: 2e-31 |
Identity: 75.61% |
Span: 246bp (77.1%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|47680295|gb|AAT37131.1| |
score: 124 |
e-value: 1e-27 |
Identity: 69.14% |
Span: 243bp (76.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor 1 [Zea mays] >gi47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [... |
| Match: gi|50921405|ref|XP_471063.1| |
score: 122 |
e-value: 5e-27 |
Identity: 69.14% |
Span: 243bp (76.2%) |
Frame: 2 |
| gi|50921405|ref|XP_471063.1| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] >gi|38344865|emb|CAE01291.2| OS... |
| Match: gi|47680305|gb|AAT37136.1| |
score: 119 |
e-value: 4e-26 |
Identity: 65.43% |
Span: 243bp (76.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor 2 [Zea mays] >gi47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 118 |
e-value: 1e-25 |
Identity: 66.67% |
Span: 243bp (76.2%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|47680309|gb|AAT37138.1| |
score: 113 |
e-value: 3e-24 |
Identity: 68.49% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays] >gi|47680375|gb|AAT37129.1| ar... |
| Match: gi|50904881|ref|XP_463929.1| |
score: 112 |
e-value: 4e-24 |
Identity: 69.74% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|50904881|ref|XP_463929.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa (japonica cultivar-gro... |
| Match: gi|1707370|emb|CAA67799.1| |
score: 110 |
e-value: 2e-23 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 110 |
e-value: 2e-23 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 110 |
e-value: 2e-23 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|7269400|emb|CAB81360.1| |
score: 110 |
e-value: 3e-23 |
Identity: 66.67% |
Span: 225bp (70.5%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 109 |
e-value: 3e-23 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|1667582|gb|AAB18813.1| |
score: 108 |
e-value: 1e-22 |
Identity: 65.79% |
Span: 228bp (71.5%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|41323931|gb|AAS00039.1| |
score: 106 |
e-value: 4e-22 |
Identity: 63.16% |
Span: 228bp (71.5%) |
Frame: 2 |
| splicing factor-like protein [Vitis riparia] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 74.3 |
e-value: 2e-12 |
Identity: 47.67% |
Span: 246bp (77.1%) |
Frame: 2 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|11527011|gb|AAG36874.1| |
score: 74.3 |
e-value: 2e-12 |
Identity: 47.67% |
Span: 246bp (77.1%) |
Frame: 2 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|39583259|emb|CAE60051.1| |
score: 73.2 |
e-value: 4e-12 |
Identity: 48.15% |
Span: 231bp (72.4%) |
Frame: 2 |
| gi|39583259|emb|CAE60051.1| Hypothetical protein CBG03563 [Caenorhabditis briggsae] |
| Match: gi|50939903|ref|XP_479479.1| |
score: 72 |
e-value: 8e-12 |
Identity: 52.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|50939903|ref|XP_479479.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] >gi|33146... |
| Match: gi|42571257|ref|NP_973702.1| |
score: 71.6 |
e-value: 1e-11 |
Identity: 64.81% |
Span: 153bp (48.0%) |
Frame: 2 |
| gi|42571257|ref|NP_973702.1| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] |
| Match: gi|39582979|emb|CAE73044.1| |
score: 71.6 |
e-value: 1e-11 |
Identity: 47.37% |
Span: 213bp (66.8%) |
Frame: 2 |
| gi|39582979|emb|CAE73044.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae] |
| Match: gi|55792397|gb|AAV65309.1| |
score: 71.2 |
e-value: 1e-11 |
Identity: 51.25% |
Span: 225bp (70.5%) |
Frame: 2 |
| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|68037673|gb|AAY84884.1| |
score: 70.9 |
e-value: 2e-11 |
Identity: 51.25% |
Span: 225bp (70.5%) |
Frame: 2 |
| alternative splicing regulator [Triticum aestivum] |
| Match: gi|5815239|gb|AAD52613.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana] |
| Match: gi|52140010|gb|AAU29332.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 50% |
Span: 231bp (72.4%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays] |
| Match: gi|5815235|gb|AAD52609.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|5815235|gb|AAD52609.1| splicing factor SR1 [Arabidopsis thaliana] |
| Match: gi|52140013|gb|AAU29334.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 50% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays] |
| Match: gi|52140009|gb|AAU29331.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 50% |
Span: 231bp (72.4%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays] |
| Match: gi|5815237|gb|AAD52611.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana] |
| Match: gi|2443473|gb|AAB71386.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] |
| Match: gi|30678398|ref|NP_563665.3| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| SR1; |
| Match: gi|30678395|ref|NP_850934.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|30678395|ref|NP_850934.1| pre-mRNA splicing factor SF2 (SR1 protein) [Arabidopsis thaliana] gi|22135918|gb|AAM9154... |
| Match: gi|52140015|gb|AAU29336.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 50% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays] |
| Match: gi|5815238|gb|AAD52612.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana] |
| Match: gi|52140012|gb|AAU29333.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 50% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays] |
| Match: gi|5815236|gb|AAD52610.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana] |
| Match: gi|166844|gb|AAA32856.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|166844|gb|AAA32856.1| ribonucleoprotein >gi|1582992|prf||2119375A Ser/Arg-rich protein |
| Match: gi|30679143|ref|NP_567235.3| |
score: 66.6 |
e-value: 3e-10 |
Identity: 45.88% |
Span: 240bp (75.2%) |
Frame: 2 |
| gi|30679143|ref|NP_567235.3| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] |
| Match: gi|30679138|ref|NP_849537.1| |
score: 66.6 |
e-value: 3e-10 |
Identity: 45.88% |
Span: 240bp (75.2%) |
Frame: 2 |
| gi|30679138|ref|NP_849537.1| arginine/serine-rich splicing factor (atSRp34), putative [Arabidopsis thaliana] gi|26451... |
| Match: gi|7269003|emb|CAB80736.1| |
score: 66.6 |
e-value: 3e-10 |
Identity: 45.88% |
Span: 240bp (75.2%) |
Frame: 2 |
| gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana] >gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana] |
| Match: gi|71996546|ref|NP_495308.3| |
score: 65.9 |
e-value: 6e-10 |
Identity: 45.95% |
Span: 222bp (69.6%) |
Frame: 2 |
| SR |
| Match: gi|54291866|gb|AAV32234.1| |
score: 65.9 |
e-value: 6e-10 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|71996532|ref|NP_495309.3| |
score: 65.9 |
e-value: 6e-10 |
Identity: 45.95% |
Span: 222bp (69.6%) |
Frame: 2 |
| SR |
| Match: gi|71996524|ref|NP_495307.3| |
score: 65.9 |
e-value: 6e-10 |
Identity: 45.95% |
Span: 222bp (69.6%) |
Frame: 2 |
| SR |
| Match: gi|51854465|gb|AAU10844.1| |
score: 65.9 |
e-value: 6e-10 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|52140006|gb|AAU29329.1| |
score: 65.5 |
e-value: 7e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] |
| Match: gi|108708089|gb|ABF95884.1| |
score: 65.5 |
e-value: 7e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi215692748|dbj|BAG88168.... |
| Match: gi|52140005|gb|AAU29328.1| |
score: 65.5 |
e-value: 7e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays] |
| Match: gi|108708090|gb|ABF95885.1| |
score: 65.5 |
e-value: 7e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|52140007|gb|AAU29330.1| |
score: 65.5 |
e-value: 7e-10 |
Identity: 47.5% |
Span: 225bp (70.5%) |
Frame: 2 |
| gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays] |
| Match: gi|39597103|emb|CAE59330.1| |
score: 65.1 |
e-value: 1e-09 |
Identity: 45.95% |
Span: 222bp (69.6%) |
Frame: 2 |
| gi|39597103|emb|CAE59330.1| Hypothetical protein CBG02672 [Caenorhabditis briggsae] |
| Match: gi|51971529|dbj|BAD44429.1| |
score: 65.1 |
e-value: 1e-09 |
Identity: 46.15% |
Span: 234bp (73.4%) |
Frame: 2 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|9843663|emb|CAC03605.1| |
score: 64.7 |
e-value: 1e-09 |
Identity: 46.15% |
Span: 234bp (73.4%) |
Frame: 2 |
| splicing factor RSZ33 [Arabidopsis thaliana] |
| Match: gi|30687109|ref|NP_850280.1| |
score: 64.7 |
e-value: 1e-09 |
Identity: 46.15% |
Span: 234bp (73.4%) |
Frame: 2 |
| RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi18252179|gb|AAL61922.1|... |
| Match: gi|91094955|ref|XP_969451.1| |
score: 63.9 |
e-value: 2e-09 |
Identity: 46.48% |
Span: 213bp (66.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|7446338|pir||T16953 |
score: 63.9 |
e-value: 2e-09 |
Identity: 44.59% |
Span: 222bp (69.6%) |
Frame: 2 |
| gi|7446338|pir||T16953 hypothetical protein T28D9.2 - Caenorhabditis elegans |
| Match: gi|12836310|dbj|BAB23599.1| |
score: 63.5 |
e-value: 3e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus] |
| Match: gi|56270156|gb|AAH87121.1| |
score: 63.5 |
e-value: 3e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| Similar |
| Match: gi|30693839|ref|NP_190918.3| |
score: 63.5 |
e-value: 3e-09 |
Identity: 45.57% |
Span: 237bp (74.3%) |
Frame: 2 |
| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] >gi9795142|emb|CAB67657.2| splicing factor-like protei... |
| Match: gi|74226809|dbj|BAE27050.1| |
score: 63.5 |
e-value: 3e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus] |
| Match: gi|74228832|dbj|BAE21902.1| |
score: 63.5 |
e-value: 3e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus] >gi|74197209|dbj|BAE35148.1| unnamed protein produ... |
| Match: gi|31543689|ref|NP_080775.2| |
score: 63.5 |
e-value: 3e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|31543689|ref|NP_080775.2| arginine/serine-rich splicing factor 6 [Mus musculus] gi|15080592|gb|AAH12039.1| Splicin... |
| Match: gi|6759507|emb|CAB69816.1| |
score: 63.2 |
e-value: 4e-09 |
Identity: 60.87% |
Span: 138bp (43.3%) |
Frame: 2 |
| gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis] |
| Match: gi|4972267|emb|CAB43961.1| |
score: 62.8 |
e-value: 5e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|4972267|emb|CAB43961.1| dJ862K6.2.2 (splicing factor, arginine/serine-rich 6 (SRP55-2)(isoform 2)) [Homo sapiens] |
| Match: gi|30584231|gb|AAP36364.1| |
score: 62.8 |
e-value: 5e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic construct] |
| Match: gi|20127499|ref|NP_006266.2| |
score: 62.8 |
e-value: 5e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|20127499|ref|NP_006266.2| arginine/serine-rich splicing factor 6; splicing factor, arginine/serine-rich, 55 kDa; p... |
| Match: gi|62087532|dbj|BAD92213.1| |
score: 62.8 |
e-value: 5e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens] |
| Match: gi|78369222|ref|NP_001030349.1| |
score: 62.4 |
e-value: 6e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|78369222|ref|NP_001030349.1| hypothetical protein LOC507828 [Bos taurus] >gi|77567850|gb|AAI07554.1| Unknown (prot... |
| Match: gi|79582138|ref|NP_683288.2| |
score: 62.4 |
e-value: 6e-09 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775271|emb|CAB42558.1| SF2/ASF-like splicing modul... |
| Match: gi|3249109|gb|AAC24092.1| |
score: 62.4 |
e-value: 6e-09 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit gbM72709 from Homo sapiens. ESTs gb|T42588 and gb... |
| Match: gi|42561847|ref|NP_172386.3| |
score: 62.4 |
e-value: 6e-09 |
Identity: 48.75% |
Span: 225bp (70.5%) |
Frame: 2 |
| SF2/ASF-like splicing modulator (SRP30) [Arabidopsis thaliana] >gi4775270|emb|CAB42557.1| SF2/ASF-like splicing modul... |
| Match: gi|53133810|emb|CAG32234.1| |
score: 62 |
e-value: 8e-09 |
Identity: 39.47% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|53133810|emb|CAG32234.1| hypothetical protein [Gallus gallus] >gi|71895047|ref|NP_001026014.1| arginine/serine-ric... |
| Match: gi|47220462|emb|CAG03242.1| |
score: 61.6 |
e-value: 1e-08 |
Identity: 38.16% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|34894608|ref|NP_908629.1| |
score: 61.2 |
e-value: 1e-08 |
Identity: 48.78% |
Span: 231bp (72.4%) |
Frame: 2 |
| gi|34894608|ref|NP_908629.1| putative pre-mRNA splicing factor SF2 [Oryza sativa (japonica cultivar-group)] gi|201614... |
| Match: gi|108877724|gb|EAT41949.1| |
score: 61.2 |
e-value: 1e-08 |
Identity: 42.67% |
Span: 213bp (66.8%) |
Frame: 2 |
| arginine/serine-rich |
| Match: gi|55240069|gb|EAL40334.1| |
score: 61.2 |
e-value: 1e-08 |
Identity: 42.67% |
Span: 213bp (66.8%) |
Frame: 2 |
| gi|55240069|gb|EAL40334.1| ENSANGP00000027996 [Anopheles gambiae str. PEST] >gi|57923042|ref|XP_558031.1| ENSANGP0000... |
| Match: gi|55240068|gb|EAA09889.2| |
score: 61.2 |
e-value: 1e-08 |
Identity: 42.67% |
Span: 213bp (66.8%) |
Frame: 2 |
| gi|55240068|gb|EAA09889.2| ENSANGP00000020592 [Anopheles gambiae str. PEST] >gi|58386082|ref|XP_314469.2| ENSANGP0000... |
| Match: gi|54639204|gb|EAL28606.1| |
score: 61.2 |
e-value: 1e-08 |
Identity: 42.67% |
Span: 213bp (66.8%) |
Frame: 2 |
| gi|54639204|gb|EAL28606.1| GA20008-PA [Drosophila pseudoobscura] |
| Match: gi|21358097|ref|NP_652611.1| |
score: 61.2 |
e-value: 1e-08 |
Identity: 42.67% |
Span: 213bp (66.8%) |
Frame: 2 |
| gi|21358097|ref|NP_652611.1| CG6987-PA [Drosophila melanogaster] gi|7243684|gb|AAF43413.1| SR family splicing factor ... |
| Match: gi|1049088|gb|AAA93073.1| |
score: 60.8 |
e-value: 2e-08 |
Identity: 38.16% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|1049088|gb|AAA93073.1| SRp55-1 |
| Match: gi|1049086|gb|AAA93072.1| |
score: 60.8 |
e-value: 2e-08 |
Identity: 38.16% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|1049086|gb|AAA93072.1| SRp55-3 |
| Match: gi|1049084|gb|AAA93071.1| |
score: 60.8 |
e-value: 2e-08 |
Identity: 38.16% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|1049084|gb|AAA93071.1| SRp55-2 |
| Match: gi|67471778|ref|XP_651801.1| |
score: 60.5 |
e-value: 2e-08 |
Identity: 37.5% |
Span: 216bp (67.7%) |
Frame: 2 |
| splicing |
| Match: gi|56388745|gb|AAH87684.1| |
score: 60.5 |
e-value: 2e-08 |
Identity: 42.31% |
Span: 219bp (68.7%) |
Frame: 2 |
| Splicing |
| Match: gi|52140014|gb|AAU29335.1| |
score: 60.1 |
e-value: 3e-08 |
Identity: 45.35% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays] |
| Match: gi|6561944|emb|CAB62448.1| |
score: 60.1 |
e-value: 3e-08 |
Identity: 43.02% |
Span: 243bp (76.2%) |
Frame: 2 |
| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana] |
| Match: gi|55770401|ref|XP_550191.1| |
score: 60.1 |
e-value: 3e-08 |
Identity: 47.89% |
Span: 213bp (66.8%) |
Frame: 2 |
| gi|55770401|ref|XP_550191.1| putative splicing factor [Oryza sativa (japonica cultivar-group)] >gi|54290784|dbj|BAD61... |
| Match: gi|12324445|gb|AAG52185.1| |
score: 60.1 |
e-value: 3e-08 |
Identity: 43.02% |
Span: 243bp (76.2%) |
Frame: 2 |
| gi|12324445|gb|AAG52185.1| putative splicing factor; 53460-55514 [Arabidopsis thaliana] |
| Match: gi|33416587|gb|AAH55511.1| |
score: 60.1 |
e-value: 3e-08 |
Identity: 43.59% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|33416587|gb|AAH55511.1| Unknown (protein for MGC:66146) [Danio rerio] |
| Match: gi|91085405|ref|XP_967263.1| |
score: 60.1 |
e-value: 3e-08 |
Identity: 42.67% |
Span: 213bp (66.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|42565781|ref|NP_190512.3| |
score: 60.1 |
e-value: 3e-08 |
Identity: 43.02% |
Span: 243bp (76.2%) |
Frame: 2 |
| SRp34a (Ser/Arg-rich protein 34a); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi... |
| Match: gi|76573323|gb|ABA46766.1| |
score: 59.7 |
e-value: 4e-08 |
Identity: 45% |
Span: 225bp (70.5%) |
Frame: 2 |
| pre-mRNA splicing factor-like protein [Solanum tuberosum] |
| Match: gi|76638495|ref|XP_586968.2| |
score: 59.7 |
e-value: 4e-08 |
Identity: 40.66% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|76638495|ref|XP_586968.2| PREDICTED: similar to splicing factor, arginine/serine rich 9 (predicted) isoform 1 [Bos... |
| Match: gi|28422195|gb|AAH44265.1| |
score: 59.7 |
e-value: 4e-08 |
Identity: 38.16% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis] |
| Match: gi|56758822|gb|AAW27551.1| |
score: 59.7 |
e-value: 4e-08 |
Identity: 45.21% |
Span: 201bp (63.0%) |
Frame: 2 |
| gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum] |
| Match: gi|47680311|gb|AAT37139.1| |
score: 59.7 |
e-value: 4e-08 |
Identity: 59.52% |
Span: 126bp (39.5%) |
Frame: 2 |
| gi|47680311|gb|AAT37139.1| arginine/serine-rich splicing factor 2 variant 3 [Zea mays] >gi|47680376|gb|AAT37130.1| ar... |
| Match: gi|27503247|gb|AAH42354.1| |
score: 59.3 |
e-value: 5e-08 |
Identity: 43.59% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|27503247|gb|AAH42354.1| Similar to splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing ... |
| Match: gi|28436899|gb|AAH46668.1| |
score: 59.3 |
e-value: 5e-08 |
Identity: 36.84% |
Span: 228bp (71.5%) |
Frame: 2 |
| gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis] |
| Match: gi|45708738|gb|AAH33785.1| |
score: 59.3 |
e-value: 5e-08 |
Identity: 43.59% |
Span: 219bp (68.7%) |
Frame: 2 |
| gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens] |
|
| 160 lower scoring hits censored -- only 100 best hits are stored. |
