All Stored BLAST annotations for SGN-U334359
arabidopsis/peptide [blastx] Showing best 74 hits recorded
Match: At2G44710.1 score: 121 e-value: 1e-38 Identity: 40.43% Span: 558bp (173.8%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:18439977-18443704 FORWARD
Match: At4G00830.1 score: 90.5 e-value: 7e-23 Identity: 30.94% Span: 495bp (154.2%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr4:352782-354965 FORWARD
Match: At4G00830.2 score: 90.5 e-value: 7e-23 Identity: 30.94% Span: 495bp (154.2%) Frame: 3
RNA binding | chr4:352782-354965 FORWARD
Match: At3G52660.1 score: 83.2 e-value: 2e-16 Identity: 35.19% Span: 456bp (142.1%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:19533576-19535713 FORWARD
Match: At3G52660.2 score: 83.2 e-value: 2e-16 Identity: 35.19% Span: 456bp (142.1%) Frame: 3
RNA binding | chr3:19533576-19535713 FORWARD
Match: At2G44710.1 score: 57 e-value: 1e-38 Identity: 50.91% Span: 162bp (50.5%) Frame: 2
RNA recognition motif (RRM)-containing protein | chr2:18439977-18443704 FORWARD
Match: At1G49760.1 score: 55.1 e-value: 7e-08 Identity: 36.76% Span: 204bp (63.6%) Frame: 3
Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234...
Match: At3G13224.1 score: 52.4 e-value: 5e-07 Identity: 29.25% Span: 315bp (98.1%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD
Match: At3G13224.2 score: 52.4 e-value: 5e-07 Identity: 29.25% Span: 315bp (98.1%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD
Match: At3G47120.1 score: 52.4 e-value: 5e-07 Identity: 31.4% Span: 243bp (75.7%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:17362319-17363754 REVERSE
Match: At1G78260.1 score: 52.4 e-value: 5e-07 Identity: 34.29% Span: 210bp (65.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:29452210-29455074 FORWARD
Match: At1G78260.2 score: 52.4 e-value: 5e-07 Identity: 34.29% Span: 210bp (65.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:29452210-29454139 FORWARD
Match: At1G22330.1 score: 51.6 e-value: 8e-07 Identity: 34.29% Span: 210bp (65.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:7886682-7887571 FORWARD
Match: At2G46780.1 score: 51.2 e-value: 1e-06 Identity: 35.71% Span: 210bp (65.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:19236586-19238017 FORWARD
Match: At3G20930.1 score: 50.8 e-value: 1e-06 Identity: 29.03% Span: 279bp (86.9%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr3:7331745-7333755 FORWARD
Match: At5G04280.1 score: 50.8 e-value: 1e-06 Identity: 31.67% Span: 180bp (56.1%) Frame: 3
glycine-rich RNA-binding protein | chr5:1192462-1195414 FORWARD
Match: At1G74230.1 score: 49.7 e-value: 3e-06 Identity: 34.29% Span: 210bp (65.4%) Frame: 3
Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD
Match: At4G39260.3 score: 49.7 e-value: 3e-06 Identity: 32.39% Span: 213bp (66.4%) Frame: 3
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);...
Match: At4G39260.2 score: 49.7 e-value: 3e-06 Identity: 32.39% Span: 213bp (66.4%) Frame: 3
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);...
Match: At4G39260.1 score: 49.7 e-value: 3e-06 Identity: 32.39% Span: 213bp (66.4%) Frame: 3
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);...
Match: At1G17640.1 score: 49.7 e-value: 3e-06 Identity: 27.5% Span: 345bp (107.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE
Match: At4G16280.2 score: 49.3 e-value: 4e-06 Identity: 32.81% Span: 192bp (59.8%) Frame: 3
Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE
Match: At4G16280.3 score: 49.3 e-value: 4e-06 Identity: 32.81% Span: 192bp (59.8%) Frame: 3
Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE
Match: At5G06210.1 score: 49.3 e-value: 4e-06 Identity: 30.43% Span: 207bp (64.5%) Frame: 3
RNA-binding protein, putative | chr5:1878498-1879516 FORWARD
Match: At5G61030.1 score: 48.9 e-value: 5e-06 Identity: 31.88% Span: 207bp (64.5%) Frame: 3
Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD
Match: At2G37510.1 score: 48.9 e-value: 5e-06 Identity: 37.31% Span: 201bp (62.6%) Frame: 3
RNA-binding protein, putative | chr2:15750190-15751582 REVERSE
Match: At3G18610.1 score: 48.9 e-value: 5e-06 Identity: 24.07% Span: 474bp (147.7%) Frame: 3
Symbols: ATRANGAP1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding | chr3:6404276-6407828 REVERSE
Match: At3G23830.2 score: 48.1 e-value: 9e-06 Identity: 30% Span: 210bp (65.4%) Frame: 3
Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE
Match: At3G56860.3 score: 48.1 e-value: 9e-06 Identity: 23.84% Span: 453bp (141.1%) Frame: 3
Symbols: UBA2A | UBA2A; RNA binding | chr3:21061687-21063123 REVERSE
Match: At5G50250.1 score: 48.1 e-value: 9e-06 Identity: 23.89% Span: 483bp (150.5%) Frame: 3
31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p...
Match: At3G23830.1 score: 48.1 e-value: 9e-06 Identity: 30% Span: 210bp (65.4%) Frame: 3
Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin...
Match: At3G52380.1 score: 48.1 e-value: 9e-06 Identity: 23.53% Span: 342bp (106.5%) Frame: 3
Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD
Match: At3G56860.2 score: 48.1 e-value: 9e-06 Identity: 23.84% Span: 453bp (141.1%) Frame: 3
Symbols: UBA2A | UBA2A; AU-specific RNA binding / RNA binding | chr3:21061687-21063123 REVERSE
Match: At3G56860.1 score: 48.1 e-value: 9e-06 Identity: 23.84% Span: 453bp (141.1%) Frame: 3
Symbols: UBA2A | UBA2A; RNA binding | chr3:21061687-21063123 REVERSE
Match: At4G13850.1 score: 47.8 e-value: 1e-05 Identity: 30.43% Span: 207bp (64.5%) Frame: 3
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ...
Match: At1G76460.1 score: 47.8 e-value: 1e-05 Identity: 35.71% Span: 210bp (65.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:28691826-28693400 REVERSE
Match: At1G71800.1 score: 47.8 e-value: 1e-05 Identity: 33.33% Span: 207bp (64.5%) Frame: 3
cleavage stimulation factor, putative | chr1:27003268-27005512 FORWARD
Match: At4G13850.2 score: 47.8 e-value: 1e-05 Identity: 30.43% Span: 207bp (64.5%) Frame: 3
Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD
Match: At1G60000.1 score: 46.6 e-value: 3e-05 Identity: 24.21% Span: 507bp (157.9%) Frame: 3
29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE
Match: At1G49600.1 score: 46.6 e-value: 3e-05 Identity: 39.71% Span: 204bp (63.6%) Frame: 3
Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE...
Match: At2G41060.1 score: 46.6 e-value: 3e-05 Identity: 25.86% Span: 456bp (142.1%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:17134216-17135571 FORWARD
Match: At1G53720.1 score: 46.6 e-value: 3e-05 Identity: 26.55% Span: 339bp (105.6%) Frame: 3
Symbols: ATCYP59, CYP59 | ATCYP59/CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding / peptidyl-prolyl cis-t...
Match: At4G39260.4 score: 46.2 e-value: 3e-05 Identity: 33.33% Span: 189bp (58.9%) Frame: 3
Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);...
Match: At1G20880.1 score: 45.8 e-value: 4e-05 Identity: 34.29% Span: 210bp (65.4%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr1:7262868-7264823 REVERSE
Match: At4G27000.1 score: 45.8 e-value: 4e-05 Identity: 32.63% Span: 282bp (87.9%) Frame: 3
RNA-binding protein 45 (RBP45), putative | chr4:13554989-13557769 REVERSE
Match: At2G16260.1 score: 45.8 e-value: 4e-05 Identity: 32.39% Span: 213bp (66.4%) Frame: 3
| Symbol: None | glycine-rich RNA-binding protein, putative, similar to Glycine-rich RNA-binding protein from {Daucus...
Match: At2G18510.1 score: 45.8 e-value: 4e-05 Identity: 30.67% Span: 225bp (70.1%) Frame: 3
Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE
Match: At2G23350.1 score: 45.4 e-value: 6e-05 Identity: 30.88% Span: 204bp (63.6%) Frame: 3
Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121...
Match: At5G40490.1 score: 45.4 e-value: 6e-05 Identity: 23.28% Span: 339bp (105.6%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD
Match: At5G54580.1 score: 45.4 e-value: 6e-05 Identity: 32.84% Span: 201bp (62.6%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:22188558-22189882 FORWARD
Match: At3G19130.1 score: 45.4 e-value: 6e-05 Identity: 38.24% Span: 204bp (63.6%) Frame: 3
Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE
Match: At2G22100.1 score: 45.4 e-value: 6e-05 Identity: 26.23% Span: 345bp (107.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:9399477-9400625 REVERSE
Match: At2G21440.1 score: 45.4 e-value: 6e-05 Identity: 34.57% Span: 243bp (75.7%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr2:9180792-9186145 REVERSE
Match: At1G58470.1 score: 45.4 e-value: 6e-05 Identity: 30.38% Span: 225bp (70.1%) Frame: 3
Symbols: RBP1, XF41, ATRBP1 | ATRBP1 (RNA-BINDING PROTEIN 1); RNA binding | chr1:21731039-21732204 FORWARD
Match: At5G53680.1 score: 45.1 e-value: 7e-05 Identity: 31.88% Span: 207bp (64.5%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:21815608-21816335 FORWARD
Match: At3G06970.1 score: 45.1 e-value: 7e-05 Identity: 33.33% Span: 216bp (67.3%) Frame: 3
RNA binding | chr3:2199659-2201156 REVERSE
Match: At2G33410.1 score: 45.1 e-value: 7e-05 Identity: 33.33% Span: 180bp (56.1%) Frame: 3
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr2:14163161-14164511 FORWARD
Match: At5G19350.1 score: 45.1 e-value: 7e-05 Identity: 39.34% Span: 180bp (56.1%) Frame: 3
RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD
Match: At5G55550.3 score: 45.1 e-value: 7e-05 Identity: 32.79% Span: 183bp (57.0%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE
Match: At5G55550.1 score: 45.1 e-value: 7e-05 Identity: 32.79% Span: 183bp (57.0%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE
Match: At5G55550.2 score: 45.1 e-value: 7e-05 Identity: 32.79% Span: 183bp (57.0%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE
Match: At2G43370.1 score: 45.1 e-value: 7e-05 Identity: 27.94% Span: 204bp (63.6%) Frame: 3
U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18020508-18022453 FORWARD
Match: At4G16280.3 score: 44.7 e-value: 0.0001 Identity: 32.84% Span: 201bp (62.6%) Frame: 3
Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE
Match: At4G13860.1 score: 44.7 e-value: 0.0001 Identity: 28.99% Span: 207bp (64.5%) Frame: 3
glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD
Match: At4G16280.2 score: 44.7 e-value: 0.0001 Identity: 32.84% Span: 201bp (62.6%) Frame: 3
Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE
Match: At1G48920.1 score: 44.7 e-value: 0.0001 Identity: 26.19% Span: 378bp (117.8%) Frame: 3
Symbols: ATNUC-L1, PARL1 | nucleolin, putative | chr1:18101854-18105090 FORWARD
Match: At3G07810.1 score: 44.3 e-value: 0.0001 Identity: 31.75% Span: 189bp (58.9%) Frame: 3
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD
Match: At3G07810.2 score: 44.3 e-value: 0.0001 Identity: 31.75% Span: 189bp (58.9%) Frame: 3
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD
Match: At5G19960.1 score: 44.3 e-value: 0.0001 Identity: 35.29% Span: 204bp (63.6%) Frame: 3
RNA recognition motif (RRM)-containing protein | chr5:6744031-6746135 FORWARD
Match: At2G21690.1 score: 44.3 e-value: 0.0001 Identity: 32.39% Span: 213bp (66.4%) Frame: 3
RNA-binding protein, putative | chr2:9277194-9277677 REVERSE
Match: At1G71770.1 score: 44.3 e-value: 0.0001 Identity: 32.1% Span: 243bp (75.7%) Frame: 3
Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE
Match: At4G14300.1 score: 44.3 e-value: 0.0001 Identity: 32.76% Span: 174bp (54.2%) Frame: 3
heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr4:8231175-8232781 FORWARD
Match: At4G00830.1 score: 35 e-value: 7e-23 Identity: 30.56% Span: 213bp (66.4%) Frame: 2
RNA recognition motif (RRM)-containing protein | chr4:352782-354965 FORWARD
Match: At4G00830.2 score: 35 e-value: 7e-23 Identity: 30.56% Span: 213bp (66.4%) Frame: 2
RNA binding | chr4:352782-354965 FORWARD

112 lower scoring hits censored -- only 74 best hits are stored.
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|92888348|gb|ABE89366.1| score: 150 e-value: 7e-35 Identity: 37.89% Span: 732bp (228.0%) Frame: 3
RNA
Match: gi|50927259|ref|XP_473377.1| score: 122 e-value: 4e-36 Identity: 39.78% Span: 525bp (163.6%) Frame: 3
gi|50927259|ref|XP_473377.1| OSJNBb0103I08.18 [Oryza sativa (japonica cultivar-group)] >gi|38345949|emb|CAE04337.2| O...
Match: gi|110740397|dbj|BAF02093.1| score: 121 e-value: 1e-36 Identity: 40.43% Span: 558bp (173.8%) Frame: 3
hypothetical protein [Arabidopsis thaliana]
Match: gi|30689808|ref|NP_850422.1| score: 121 e-value: 1e-36 Identity: 40.43% Span: 558bp (173.8%) Frame: 3
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20147226|gb|AAM10328.1| At2g44720/F16B22.21 ...
Match: gi|37359248|gb|AAN77868.1| score: 114 e-value: 1e-23 Identity: 40.76% Span: 468bp (145.8%) Frame: 3
putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
Match: gi|3341691|gb|AAC27473.1| score: 110 e-value: 3e-24 Identity: 40.11% Span: 540bp (168.2%) Frame: 3
putative heterogeneous nuclear ribonucleoprotein [Arabidopsis thaliana]
Match: gi|18411454|ref|NP_567192.1| score: 90.5 e-value: 6e-21 Identity: 30.94% Span: 495bp (154.2%) Frame: 3
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition...
Match: gi|108862166|gb|ABG21876.1| score: 84.3 e-value: 2e-17 Identity: 33.53% Span: 486bp (151.4%) Frame: 3
RNA
Match: gi|29371361|gb|AAO72701.1| score: 84.3 e-value: 2e-17 Identity: 33.53% Span: 486bp (151.4%) Frame: 3
putative RNA-binding protein [Oryza sativa Japonica Group]
Match: gi|15231284|ref|NP_190834.1| score: 83.2 e-value: 2e-14 Identity: 35.19% Span: 456bp (142.1%) Frame: 3
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79314840|ref|NP_001030849.1| RNA recognition...
Match: gi|92897076|gb|ABE93532.1| score: 82 e-value: 1e-17 Identity: 30% Span: 456bp (142.1%) Frame: 3
RNA-binding
Match: gi|108863978|gb|ABA91387.2| score: 79.7 e-value: 4e-16 Identity: 35.33% Span: 429bp (133.6%) Frame: 3
RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)]
Match: gi|50934673|ref|XP_476864.1| score: 78.6 e-value: 9e-17 Identity: 40.54% Span: 318bp (99.1%) Frame: 3
gi|50934673|ref|XP_476864.1| putative RRM RNA binding protein NSAP1 [Oryza sativa (japonica cultivar-group)] >gi|3439...
Match: gi|87241499|gb|ABD33357.1| score: 77 e-value: 4e-13 Identity: 32.1% Span: 447bp (139.3%) Frame: 3
RNA-binding
Match: gi|7267422|emb|CAB80892.1| score: 76.3 e-value: 4e-16 Identity: 27.51% Span: 483bp (150.5%) Frame: 3
gi|7267422|emb|CAB80892.1| putative protein [Arabidopsis thaliana] >gi|2252863|gb|AAB62861.1| similar to nucleolin pr...
Match: gi|50936809|ref|XP_477932.1| score: 75.1 e-value: 2e-18 Identity: 33.1% Span: 399bp (124.3%) Frame: 3
gi|50936809|ref|XP_477932.1| water-stress protein-like protein [Oryza sativa (japonica cultivar-group)] >gi|34395354|...
Match: gi|6321599|ref|NP_011675.1| score: 74.7 e-value: 7e-12 Identity: 26.82% Span: 537bp (167.3%) Frame: 3
gi|6321599|ref|NP_011675.1| nuclear localization sequence binding protein; Nsr1p [Saccharomyces cerevisiae] gi|128576...
Match: gi|77549578|gb|ABA92375.1| score: 68.9 e-value: 4e-10 Identity: 40.51% Span: 231bp (72.0%) Frame: 3
gi|77549578|gb|ABA92375.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ...
Match: gi|68473894|ref|XP_719050.1| score: 64.7 e-value: 7e-09 Identity: 25.26% Span: 477bp (148.6%) Frame: 3
putative
Match: gi|78707790|gb|ABB46765.1| score: 62.8 e-value: 3e-08 Identity: 36.71% Span: 231bp (72.0%) Frame: 3
gi|78707790|gb|ABB46765.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ...
Match: gi|37531112|ref|NP_919858.1| score: 62.8 e-value: 3e-08 Identity: 36.71% Span: 231bp (72.0%) Frame: 3
gi|37531112|ref|NP_919858.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|18425248|gb|AAL...
Match: gi|49525136|emb|CAG58749.1| score: 62 e-value: 6e-10 Identity: 22.35% Span: 537bp (167.3%) Frame: 3
unnamed
Match: gi|51860098|gb|AAU11302.1| score: 60.8 e-value: 1e-07 Identity: 33.71% Span: 267bp (83.2%) Frame: 3
RNA-binding
Match: gi|51872093|gb|AAU12170.1| score: 60.8 e-value: 1e-07 Identity: 33.71% Span: 267bp (83.2%) Frame: 3
AUF1-like
Match: gi|50906419|ref|XP_464698.1| score: 60.1 e-value: 2e-07 Identity: 27.83% Span: 345bp (107.5%) Frame: 3
gi|50906419|ref|XP_464698.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa (japonica cultivar-grou...
Match: gi|50906421|ref|XP_464699.1| score: 60.1 e-value: 2e-07 Identity: 27.83% Span: 345bp (107.5%) Frame: 3
gi|50906421|ref|XP_464699.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa (japonica cultivar-grou...
Match: gi|65304188|emb|CAI76567.1| score: 60.1 e-value: 2e-07 Identity: 22.44% Span: 426bp (132.7%) Frame: 3
RNA
Match: gi|83273889|ref|XP_729596.1| score: 59.7 e-value: 2e-07 Identity: 30.26% Span: 432bp (134.6%) Frame: 3
peptidyl
Match: gi|71029064|ref|XP_764175.1| score: 58.9 e-value: 4e-07 Identity: 27.27% Span: 297bp (92.5%) Frame: 3
hypothetical
Match: gi|90307348|gb|EAS36979.1| score: 58.5 e-value: 5e-07 Identity: 22.81% Span: 480bp (149.5%) Frame: 3
hypothetical
Match: gi|398327|emb|CAA81127.1| score: 58.5 e-value: 5e-07 Identity: 39.71% Span: 204bp (63.6%) Frame: 3
gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Match: gi|37531426|ref|NP_920015.1| score: 58.5 e-value: 5e-07 Identity: 30.57% Span: 465bp (144.9%) Frame: 3
gi|37531426|ref|NP_920015.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|22655766|gb|AAN04183.1|...
Match: gi|68063587|ref|XP_673789.1| score: 58.2 e-value: 6e-07 Identity: 29.61% Span: 432bp (134.6%) Frame: 3
hypothetical
Match: gi|49652564|emb|CAG84877.1| score: 58.2 e-value: 1e-09 Identity: 24.4% Span: 549bp (171.0%) Frame: 3
gi|49652564|emb|CAG84877.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50409715|ref|XP_456900.1| unna...
Match: gi|82621124|gb|ABB86250.1| score: 57.8 e-value: 8e-07 Identity: 27.66% Span: 399bp (124.3%) Frame: 3
RNA-binding protein AKIP1-like [Solanum tuberosum]
Match: gi|50555934|ref|XP_505375.1| score: 57 e-value: 1e-06 Identity: 26.95% Span: 483bp (150.5%) Frame: 3
hypothetical
Match: gi|30689808|ref|NP_850422.1| score: 57 e-value: 1e-36 Identity: 50.91% Span: 162bp (50.5%) Frame: 2
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20147226|gb|AAM10328.1| At2g44720/F16B22.21 ...
Match: gi|71029664|ref|XP_764475.1| score: 57 e-value: 1e-06 Identity: 37.8% Span: 246bp (76.6%) Frame: 3
hypothetical
Match: gi|110740397|dbj|BAF02093.1| score: 57 e-value: 1e-36 Identity: 50.91% Span: 162bp (50.5%) Frame: 2
hypothetical protein [Arabidopsis thaliana]
Match: gi|53793315|dbj|BAD54536.1| score: 56.6 e-value: 2e-06 Identity: 26.96% Span: 345bp (107.5%) Frame: 3
putative
Match: gi|44982692|gb|AAS51955.1| score: 56.6 e-value: 2e-06 Identity: 27.74% Span: 462bp (143.9%) Frame: 3
ADR035Cp
Match: gi|51261513|gb|AAH80105.1| score: 56.6 e-value: 2e-06 Identity: 25.89% Span: 336bp (104.7%) Frame: 3
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Match: gi|39795756|gb|AAH64164.1| score: 56.6 e-value: 2e-06 Identity: 25.89% Span: 336bp (104.7%) Frame: 3
gi|39795756|gb|AAH64164.1| MGC75625 protein [Xenopus tropicalis]
Match: gi|89272716|emb|CAJ83609.1| score: 56.6 e-value: 2e-06 Identity: 25.89% Span: 336bp (104.7%) Frame: 3
TIA1
Match: gi|50305507|ref|XP_452713.1| score: 56.2 e-value: 6e-09 Identity: 23.03% Span: 495bp (154.2%) Frame: 3
unnamed
Match: gi|44984635|gb|AAS53478.1| score: 56.2 e-value: 1e-07 Identity: 25.16% Span: 474bp (147.7%) Frame: 3
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895] >gi|45198625|ref|NP_985654.1| AFR107Wp [Eremothecium...
Match: gi|61885935|ref|XP_613340.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|61885935|ref|XP_613340.1| PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein isoform...
Match: gi|109074073|ref|XP_001094782.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
PREDICTED:
Match: gi|109074069|ref|XP_001094904.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
PREDICTED:
Match: gi|15488668|gb|AAH13481.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
CDNA
Match: gi|50416510|gb|AAH77169.1| score: 55.8 e-value: 3e-06 Identity: 25.89% Span: 336bp (104.7%) Frame: 3
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Match: gi|47209668|emb|CAF95095.1| score: 55.8 e-value: 3e-06 Identity: 36.49% Span: 222bp (69.2%) Frame: 3
gi|47209668|emb|CAF95095.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|50924107|ref|XP_472414.1| score: 55.8 e-value: 3e-06 Identity: 36.76% Span: 204bp (63.6%) Frame: 3
gi|50924107|ref|XP_472414.1| OJ000126_13.13 [Oryza sativa (japonica cultivar-group)] >gi|38346331|emb|CAE02067.2| OJ0...
Match: gi|20450941|gb|AAM21973.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|20450941|gb|AAM21973.1| RNA-binding protein [Homo sapiens]
Match: gi|55727108|emb|CAH90310.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|55727108|emb|CAH90310.1| hypothetical protein [Pongo pygmaeus]
Match: gi|74216343|dbj|BAE25115.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|74216343|dbj|BAE25115.1| unnamed protein product [Mus musculus]
Match: gi|55622410|ref|XP_517160.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|55622410|ref|XP_517160.1| PREDICTED: similar to RNA-binding protein [Pan troglodytes]
Match: gi|51859195|gb|AAH81995.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
Hypothetical
Match: gi|55732443|emb|CAH92922.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|55732443|emb|CAH92922.1| hypothetical protein [Pongo pygmaeus]
Match: gi|76619734|ref|XP_877193.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|76619734|ref|XP_877193.1| PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein isoform...
Match: gi|26330794|dbj|BAC29127.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
unnamed
Match: gi|109074067|ref|XP_001095581.1| score: 55.8 e-value: 3e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
PREDICTED:
Match: gi|16215606|emb|CAC95018.1| score: 55.8 e-value: 3e-06 Identity: 25.89% Span: 336bp (104.7%) Frame: 3
gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Match: gi|5441611|emb|CAB46854.1| score: 55.5 e-value: 4e-06 Identity: 37.84% Span: 222bp (69.2%) Frame: 3
gi|5441611|emb|CAB46854.1| hypothetical protein [Canis familiaris]
Match: gi|68354364|ref|XP_691446.1| score: 55.5 e-value: 4e-06 Identity: 36.99% Span: 219bp (68.2%) Frame: 3
gi|68354364|ref|XP_691446.1| PREDICTED: similar to CG17838-PE, isoform E [Danio rerio]
Match: gi|108744011|gb|ABG02278.1| score: 55.5 e-value: 4e-06 Identity: 36.23% Span: 207bp (64.5%) Frame: 3
heterogeneous
Match: gi|34903096|ref|NP_912895.1| score: 55.5 e-value: 4e-06 Identity: 28.09% Span: 522bp (162.6%) Frame: 3
gi|34903096|ref|NP_912895.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6815067|dbj|BAA90354...
Match: gi|109071951|ref|XP_001089067.1| score: 55.5 e-value: 4e-06 Identity: 27.66% Span: 384bp (119.6%) Frame: 3
PREDICTED:
Match: gi|39585450|emb|CAE70533.1| score: 55.5 e-value: 4e-06 Identity: 43.48% Span: 207bp (64.5%) Frame: 3
gi|39585450|emb|CAE70533.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Match: gi|62088002|dbj|BAD92448.1| score: 55.1 e-value: 5e-06 Identity: 25% Span: 336bp (104.7%) Frame: 3
gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Match: gi|62702267|gb|AAX93193.1| score: 55.1 e-value: 5e-06 Identity: 25% Span: 336bp (104.7%) Frame: 3
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
Match: gi|18402769|ref|NP_564554.1| score: 55.1 e-value: 5e-06 Identity: 36.76% Span: 204bp (63.6%) Frame: 3
PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A...
Match: gi|67521766|ref|XP_658944.1| score: 55.1 e-value: 5e-06 Identity: 30% Span: 408bp (127.1%) Frame: 3
gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4] >gi|40746367|gb|EAA65523.1|...
Match: gi|17531965|ref|NP_495121.1| score: 55.1 e-value: 5e-06 Identity: 36.99% Span: 219bp (68.2%) Frame: 3
gi|17531965|ref|NP_495121.1| tia-1 family member (45.2 kD) (2G2) [Caenorhabditis elegans] gi|14573833|gb|AAK68191.1| ...
Match: gi|55596662|ref|XP_515531.1| score: 55.1 e-value: 5e-06 Identity: 25% Span: 336bp (104.7%) Frame: 3
gi|55596662|ref|XP_515531.1| PREDICTED: similar to TIA1 protein [Pan troglodytes] >gi|16198525|gb|AAH15944.1| TIA1 pr...
Match: gi|71896513|ref|NP_001025523.1| score: 55.1 e-value: 5e-06 Identity: 34.91% Span: 309bp (96.3%) Frame: 3
gi|71896513|ref|NP_001025523.1| AUF1 [Xenopus tropicalis] >gi|52355236|gb|AAU44811.1| AUF1 [Xenopus tropicalis]
Match: gi|32564504|ref|NP_495123.2| score: 55.1 e-value: 5e-06 Identity: 36.99% Span: 219bp (68.2%) Frame: 3
gi|32564504|ref|NP_495123.2| RNA-binding region RNP-1 family member (33.9 kD) (2G2) [Caenorhabditis elegans] gi|24636...
Match: gi|32564506|ref|NP_871980.1| score: 55.1 e-value: 5e-06 Identity: 36.99% Span: 219bp (68.2%) Frame: 3
gi|32564506|ref|NP_871980.1| tia-1 (32.6 kD) (2G2) [Caenorhabditis elegans] gi|24636191|gb|AAN63457.1| Hypothetical p...
Match: gi|50548145|ref|XP_501542.1| score: 55.1 e-value: 5e-06 Identity: 35.37% Span: 246bp (76.6%) Frame: 3
hypothetical
Match: gi|3874057|emb|CAB01717.1| score: 55.1 e-value: 5e-06 Identity: 43.48% Span: 207bp (64.5%) Frame: 3
gi|3874057|emb|CAB01717.1| Hypothetical protein C07A4.1 [Caenorhabditis elegans] >gi|17550216|ref|NP_509705.1| C07A4....
Match: gi|17531963|ref|NP_495120.1| score: 55.1 e-value: 5e-06 Identity: 36.99% Span: 219bp (68.2%) Frame: 3
gi|17531963|ref|NP_495120.1| RNA-binding region RNP-1 family member (41.6 kD) (2G2) [Caenorhabditis elegans] gi|14573...
Match: gi|111056352|gb|EAT77472.1| score: 53.9 e-value: 2e-07 Identity: 25.62% Span: 480bp (149.5%) Frame: 3
hypothetical
Match: gi|50927259|ref|XP_473377.1| score: 53.5 e-value: 4e-36 Identity: 50.98% Span: 153bp (47.7%) Frame: 2
gi|50927259|ref|XP_473377.1| OSJNBb0103I08.18 [Oryza sativa (japonica cultivar-group)] >gi|38345949|emb|CAE04337.2| O...
Match: gi|47213373|emb|CAF90992.1| score: 53.5 e-value: 4e-06 Identity: 36.99% Span: 219bp (68.2%) Frame: 3
gi|47213373|emb|CAF90992.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|50936809|ref|XP_477932.1| score: 42 e-value: 2e-18 Identity: 35.94% Span: 189bp (58.9%) Frame: 2
gi|50936809|ref|XP_477932.1| water-stress protein-like protein [Oryza sativa (japonica cultivar-group)] >gi|34395354|...
Match: gi|18411454|ref|NP_567192.1| score: 35 e-value: 6e-21 Identity: 30.56% Span: 213bp (66.4%) Frame: 2
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi79324963|ref|NP_001031566.1| RNA recognition...
Match: gi|7267422|emb|CAB80892.1| score: 32.7 e-value: 4e-16 Identity: 30% Span: 207bp (64.5%) Frame: 2
gi|7267422|emb|CAB80892.1| putative protein [Arabidopsis thaliana] >gi|2252863|gb|AAB62861.1| similar to nucleolin pr...
Match: gi|50934673|ref|XP_476864.1| score: 32.7 e-value: 9e-17 Identity: 38% Span: 147bp (45.8%) Frame: 2
gi|50934673|ref|XP_476864.1| putative RRM RNA binding protein NSAP1 [Oryza sativa (japonica cultivar-group)] >gi|3439...
Match: gi|92897076|gb|ABE93532.1| score: 32.3 e-value: 1e-17 Identity: 29.17% Span: 213bp (66.4%) Frame: 2
RNA-binding
Match: gi|108863978|gb|ABA91387.2| score: 29.3 e-value: 4e-16 Identity: 19.44% Span: 216bp (67.3%) Frame: 2
RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)]
Match: gi|49652564|emb|CAG84877.1| score: 28.9 e-value: 1e-09 Identity: 26.98% Span: 186bp (57.9%) Frame: 2
gi|49652564|emb|CAG84877.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50409715|ref|XP_456900.1| unna...
Match: gi|108862166|gb|ABG21876.1| score: 28.9 e-value: 2e-17 Identity: 19.44% Span: 216bp (67.3%) Frame: 2
RNA
Match: gi|29371361|gb|AAO72701.1| score: 28.9 e-value: 2e-17 Identity: 19.44% Span: 216bp (67.3%) Frame: 2
putative RNA-binding protein [Oryza sativa Japonica Group]
Match: gi|50305507|ref|XP_452713.1| score: 28.5 e-value: 6e-09 Identity: 29.69% Span: 186bp (57.9%) Frame: 2
unnamed
Match: gi|3341691|gb|AAC27473.1| score: 26.2 e-value: 3e-24 Identity: 33.33% Span: 150bp (46.7%) Frame: 2
putative heterogeneous nuclear ribonucleoprotein [Arabidopsis thaliana]
Match: gi|49525136|emb|CAG58749.1| score: 26.2 e-value: 6e-10 Identity: 26.56% Span: 186bp (57.9%) Frame: 2
unnamed
Match: gi|111056352|gb|EAT77472.1| score: 25.8 e-value: 2e-07 Identity: 31.48% Span: 153bp (47.7%) Frame: 2
hypothetical
Match: gi|44984635|gb|AAS53478.1| score: 24.3 e-value: 1e-07 Identity: 23.21% Span: 168bp (52.3%) Frame: 2
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895] >gi|45198625|ref|NP_985654.1| AFR107Wp [Eremothecium...
Match: gi|87241499|gb|ABD33357.1| score: 21.9 e-value: 4e-13 Identity: 21.24% Span: 276bp (86.0%) Frame: 2
RNA-binding
Match: gi|47213373|emb|CAF90992.1| score: 21.6 e-value: 4e-06 Identity: 23.88% Span: 192bp (59.8%) Frame: 2
gi|47213373|emb|CAF90992.1| unnamed protein product [Tetraodon nigroviridis]

223 lower scoring hits censored -- only 100 best hits are stored.