| genbank/nr [blastx] | Showing best 56 hits recorded |
| Match: gi|18401257|ref|NP_566559.1| |
score: 148.3 |
e-value: 2.3e-35 |
Identity: 67.29% |
Span: 321bp (99.1%) |
Frame: 1 |
| APUM24 (Arabidopsis Pumilio 24); RNA binding / binding [Arabidopsis thaliana] >gi7939573|dbj|BAA95774.1| unnamed prot... |
| Match: gi|34897258|ref|NP_909975.1| |
score: 123.2 |
e-value: 7.9e-28 |
Identity: 57.41% |
Span: 324bp (100.0%) |
Frame: 1 |
| gi|34897258|ref|NP_909975.1| unknown protein [Oryza sativa (japonica cultivar-group)] gi|28372668|gb|AAO39852.1| unkn... |
| Match: gi|34785334|gb|AAH16137.2| |
score: 65.47 |
e-value: 2e-10 |
Identity: 33.02% |
Span: 318bp (98.1%) |
Frame: 1 |
| gi|34785334|gb|AAH16137.2| XTP5 protein [Homo sapiens] |
| Match: gi|33620773|ref|NP_055693.3| |
score: 64.7 |
e-value: 3.4e-10 |
Identity: 35.05% |
Span: 291bp (89.8%) |
Frame: 1 |
| gi|33620773|ref|NP_055693.3| minor histocompatibility antigen HA-8; protein 5 transactivated by hepatitis B virus X a... |
| Match: gi|29126213|ref|NP_803425.1| |
score: 64.7 |
e-value: 3.4e-10 |
Identity: 32.08% |
Span: 318bp (98.1%) |
Frame: 1 |
| gi|29126213|ref|NP_803425.1| DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed [Mus musculus] gi|2634153... |
| Match: gi|29337231|sp|Q15397|K020_HUMAN |
score: 64.7 |
e-value: 3.4e-10 |
Identity: 35.05% |
Span: 291bp (89.8%) |
Frame: 1 |
| gi|29337231|sp|Q15397|K020_HUMAN Protein KIAA0020 |
| Match: gi|34862110|ref|XP_215276.2| |
score: 63.93 |
e-value: 5.7e-10 |
Identity: 34.02% |
Span: 291bp (89.8%) |
Frame: 1 |
| gi|34862110|ref|XP_215276.2| similar to DNA segment, Chr 19, Brigham & Womens Genetics 1357 expressed [Rattus norvegi... |
| Match: gi|19076064|ref|NP_588564.1| |
score: 55.45 |
e-value: 2e-07 |
Identity: 24.75% |
Span: 300bp (92.6%) |
Frame: 1 |
| gi|19076064|ref|NP_588564.1| conserved hypothetical protein [Schizosaccharomyces pombe] gi|7490383|pir||T41690 conser... |
| Match: gi|32423269|ref|XP_332072.1| |
score: 55.45 |
e-value: 2e-07 |
Identity: 33.33% |
Span: 267bp (82.4%) |
Frame: 1 |
| gi|32423269|ref|XP_332072.1| hypothetical protein [Neurospora crassa] gi|28925565|gb|EAA34590.1| hypothetical protein... |
| Match: gi|17538003|ref|NP_496178.1| |
score: 53.53 |
e-value: 7.7e-07 |
Identity: 30.77% |
Span: 306bp (94.4%) |
Frame: 1 |
| gi|17538003|ref|NP_496178.1| XTP5 (87.0 kD) (2K391) [Caenorhabditis elegans] gi|1176902|sp|Q09622|YS83_CAEEL Hypothet... |
| Match: gi|29250184|gb|EAA41682.1| |
score: 49.29 |
e-value: 1.5e-05 |
Identity: 27.91% |
Span: 258bp (79.6%) |
Frame: 1 |
| gi|29250184|gb|EAA41682.1| GLP_385_40373_42721 [Giardia lamblia ATCC 50803] |
| Match: gi|31209255|ref|XP_313594.1| |
score: 46.98 |
e-value: 7.2e-05 |
Identity: 25.93% |
Span: 321bp (99.1%) |
Frame: 1 |
| gi|31209255|ref|XP_313594.1| ENSANGP00000013373 [Anopheles gambiae] gi|21297041|gb|EAA09186.1| ENSANGP00000013373 [An... |
| Match: gi|8071634|gb|AAF71823.1| |
score: 43.9 |
e-value: 0.00061 |
Identity: 25% |
Span: 288bp (88.9%) |
Frame: 1 |
| gi|8071634|gb|AAF71823.1| pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] |
| Match: gi|18416639|ref|NP_567733.1| |
score: 42.74 |
e-value: 0.001 |
Identity: 27.63% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|18416639|ref|NP_567733.1| pumilio-related protein [Arabidopsis thaliana] gi|13430772|gb|AAK26008.1| putative pumil... |
| Match: gi|20465637|gb|AAM20149.1| |
score: 41.97 |
e-value: 0.002 |
Identity: 24% |
Span: 300bp (92.6%) |
Frame: 1 |
| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|15227051|ref|NP_180482.1| |
score: 41.97 |
e-value: 0.002 |
Identity: 24% |
Span: 300bp (92.6%) |
Frame: 1 |
| APUM2 (Arabidopsis Pumilio 2); RNA binding / binding [Arabidopsis thaliana] >gi3980413|gb|AAC95216.1| putative pumili... |
| Match: gi|8071634|gb|AAF71823.1| |
score: 40.82 |
e-value: 0.005 |
Identity: 26.09% |
Span: 258bp (79.6%) |
Frame: 1 |
| gi|8071634|gb|AAF71823.1| pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] |
| Match: gi|423994|pir||A46221 |
score: 40.05 |
e-value: 0.009 |
Identity: 21.05% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|423994|pir||A46221 abdominal segment formation protein pumilio - fruit fly (Drosophila melanogaster) gi|158191|gb... |
| Match: gi|24645268|ref|NP_731316.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 21.05% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|24645268|ref|NP_731316.1| pumilio CG9755-PB [Drosophila melanogaster] gi|7299139|gb|AAF54338.1| CG9755-PB [Drosoph... |
| Match: gi|28573153|ref|NP_788604.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 21.05% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|28573153|ref|NP_788604.1| pumilio CG9755-PE [Drosophila melanogaster] gi|25013093|gb|AAN71644.1| SD07661p [Drosoph... |
| Match: gi|24645262|ref|NP_731314.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 21.05% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|24645262|ref|NP_731314.1| pumilio CG9755-PA [Drosophila melanogaster] gi|24645264|ref|NP_524285.2| pumilio CG9755-... |
| Match: gi|33589344|gb|AAQ22439.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 21.05% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster] |
| Match: gi|8394|emb|CAA44474.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 21.05% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster] |
| Match: gi|13507678|ref|NP_109648.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|13507678|ref|NP_109648.1| pumilio 2 [Mus musculus] gi|11139702|gb|AAG31805.1| Pumilio 2 [Mus musculus] |
| Match: gi|27692665|gb|AAH41773.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus] |
| Match: gi|25146578|ref|NP_495523.2| |
score: 39.28 |
e-value: 0.015 |
Identity: 22.5% |
Span: 240bp (74.1%) |
Frame: 1 |
| gi|25146578|ref|NP_495523.2| PUmilio and FBF family member (puf-8) [Caenorhabditis elegans] gi|16259231|gb|AAC46676.2... |
| Match: gi|18999365|gb|AAH24218.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|18999365|gb|AAH24218.1| Unknown (protein for MGC:11163) [Homo sapiens] |
| Match: gi|7496737|pir||T15717 |
score: 39.28 |
e-value: 0.015 |
Identity: 22.5% |
Span: 240bp (74.1%) |
Frame: 1 |
| gi|7496737|pir||T15717 hypothetical protein C30G12.7 - Caenorhabditis elegans |
| Match: gi|15489333|gb|AAH13765.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|15489333|gb|AAH13765.1| Pum2 protein [Mus musculus] |
| Match: gi|13491168|ref|NP_056132.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens] gi|11139704|gb|AAG31806.1| Pumilio 2 [Homo sapiens] gi|... |
| Match: gi|34863115|ref|XP_216661.2| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|34863115|ref|XP_216661.2| similar to PUM1 [Rattus norvegicus] |
| Match: gi|13919630|gb|AAK21966.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus] |
| Match: gi|28972107|dbj|BAC65507.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus] |
| Match: gi|17224452|gb|AAL36981.1| |
score: 39.28 |
e-value: 0.015 |
Identity: 27.91% |
Span: 237bp (73.1%) |
Frame: 1 |
| gi|17224452|gb|AAL36981.1| translational repressor pumilio [Homo sapiens] |
| Match: gi|34863115|ref|XP_216661.2| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|34863115|ref|XP_216661.2| similar to PUM1 [Rattus norvegicus] |
| Match: gi|27692665|gb|AAH41773.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus] |
| Match: gi|13507678|ref|NP_109648.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|13507678|ref|NP_109648.1| pumilio 2 [Mus musculus] gi|11139702|gb|AAG31805.1| Pumilio 2 [Mus musculus] |
| Match: gi|13491168|ref|NP_056132.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens] gi|11139704|gb|AAG31806.1| Pumilio 2 [Homo sapiens] gi|... |
| Match: gi|13919630|gb|AAK21966.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus] |
| Match: gi|15489333|gb|AAH13765.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|15489333|gb|AAH13765.1| Pum2 protein [Mus musculus] |
| Match: gi|28972107|dbj|BAC65507.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus] |
| Match: gi|18999365|gb|AAH24218.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|18999365|gb|AAH24218.1| Unknown (protein for MGC:11163) [Homo sapiens] |
| Match: gi|17224452|gb|AAL36981.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 18.42% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|17224452|gb|AAL36981.1| translational repressor pumilio [Homo sapiens] |
| Match: gi|15218430|ref|NP_177376.1| |
score: 38.89 |
e-value: 0.02 |
Identity: 27.59% |
Span: 261bp (80.6%) |
Frame: 1 |
| APUM23 (Arabidopsis Pumilio 23); RNA binding / binding [Arabidopsis thaliana] >gi12323652|gb|AAG51785.1|AC067754_1 un... |
| Match: gi|7484786|pir||T04242 |
score: 38.51 |
e-value: 0.026 |
Identity: 29.33% |
Span: 225bp (69.4%) |
Frame: 1 |
| gi|7484786|pir||T04242 abdominal segment formation protein pumilio homolog F14M19.160 - Arabidopsis thaliana gi|45393... |
| Match: gi|6322450|ref|NP_012524.1| |
score: 38.12 |
e-value: 0.034 |
Identity: 19.77% |
Span: 258bp (79.6%) |
Frame: 1 |
| gi|6322450|ref|NP_012524.1| Protein required for cell viability; Yjl010cp [Saccharomyces cerevisiae] gi|1352954|sp|P4... |
| Match: gi|32411147|ref|XP_326054.1| |
score: 37.74 |
e-value: 0.044 |
Identity: 21.21% |
Span: 297bp (91.7%) |
Frame: 1 |
| gi|32411147|ref|XP_326054.1| hypothetical protein [Neurospora crassa] gi|28924559|gb|EAA33679.1| hypothetical protein... |
| Match: gi|14277944|pdb|1IB2|A |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain gi|23200484|pdb|1M8Z|A Chain A, Crysta... |
| Match: gi|29748037|gb|AAH50747.1| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus] |
| Match: gi|13491166|ref|NP_055491.1| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|13491166|ref|NP_055491.1| pumilio homolog 1 [Homo sapiens] gi|11139706|gb|AAG31807.1| Pumilio 1 [Homo sapiens] gi|... |
| Match: gi|29165749|gb|AAH48174.1| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|29165749|gb|AAH48174.1| Pumilio 1 [Mus musculus] |
| Match: gi|13507676|ref|NP_109647.1| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|13507676|ref|NP_109647.1| pumilio 1 [Mus musculus] gi|11991652|gb|AAG42319.1| pumilio 1 [Mus musculus] |
| Match: gi|6681354|dbj|BAA07895.2| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|6681354|dbj|BAA07895.2| KIAA0099 protein [Homo sapiens] |
| Match: gi|28972067|dbj|BAC65487.1| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus] |
| Match: gi|34871681|ref|XP_342929.1| |
score: 37.35 |
e-value: 0.057 |
Identity: 17.11% |
Span: 228bp (70.4%) |
Frame: 1 |
| gi|34871681|ref|XP_342929.1| similar to mKIAA0099 protein [Rattus norvegicus] |
| Match: gi|32410985|ref|XP_325973.1| |
score: 36.58 |
e-value: 0.098 |
Identity: 27.14% |
Span: 210bp (64.8%) |
Frame: 1 |
| gi|32410985|ref|XP_325973.1| hypothetical protein [Neurospora crassa] gi|28921438|gb|EAA30744.1| hypothetical protein... |
|
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At3g16810.1 |
score: 148.3 |
e-value: 6e-37 |
Identity: 67.29% |
Span: 321bp (99.1%) |
Frame: 1 |
| At3g16810.1 68410.m01933 expressed protein contains Pfam profile:PF00806 Pumilio-family RNA binding domains |
| Match: At4g25880.1 |
score: 42.74 |
e-value: 3.5e-05 |
Identity: 27.63% |
Span: 228bp (70.4%) |
Frame: 1 |
| At4g25880.1 68411.m03388 pumilio-related protein abdominal segment formation protein pumilio - fruitfly, PIR2:A46221 |
| Match: At2g29190.1 |
score: 41.97 |
e-value: 6e-05 |
Identity: 24% |
Span: 300bp (92.6%) |
Frame: 1 |
| At2g29190.1 68409.m03212 pumilio-family RNA-binding protein, putative |
| Match: At1g72320.2 |
score: 38.89 |
e-value: 0.00051 |
Identity: 27.59% |
Span: 261bp (80.6%) |
Frame: 1 |
| At1g72320.2 68408.m09079 pumilio-family RNA-binding protein, putative contains Pfam profile: PF00806 Pumilio-family R... |
| Match: At1g72320.1 |
score: 38.89 |
e-value: 0.00051 |
Identity: 27.59% |
Span: 261bp (80.6%) |
Frame: 1 |
| At1g72320.1 68408.m09078 pumilio-family RNA-binding protein, putative contains Pfam profile: PF00806 Pumilio-family R... |
| Match: At4g25880.1 |
score: 35.42 |
e-value: 0.006 |
Identity: 30% |
Span: 150bp (46.3%) |
Frame: 1 |
| At4g25880.1 68411.m03388 pumilio-related protein abdominal segment formation protein pumilio - fruitfly, PIR2:A46221 |
| Match: At1g22240.1 |
score: 33.11 |
e-value: 0.028 |
Identity: 21.92% |
Span: 219bp (67.6%) |
Frame: 1 |
| At1g22240.1 68408.m02515 pumilio-family RNA-binding protein, putative contains Pfam profile: PF00806 pumilio-family R... |
|
