| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|55976440|sp|Q6QNU4|DDB1_SOLLC |
score: 2126 |
e-value: 0 |
Identity: 100% |
Span: 3270bp (93.0%) |
Frame: 2 |
| RecName: |
| Match: gi|55976392|sp|Q6E7D1|DDB1_SOLCE |
score: 2120 |
e-value: 0 |
Identity: 99.54% |
Span: 3270bp (93.0%) |
Frame: 2 |
| RecName: |
| Match: gi|157350411|emb|CAO40391.1| |
score: 1993 |
e-value: 0 |
Identity: 92.84% |
Span: 3270bp (93.0%) |
Frame: 2 |
| unnamed |
| Match: gi|15235577|ref|NP_192451.1| |
score: 1924 |
e-value: 0 |
Identity: 88.81% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DDB1A (DAMAGED DNA BINDING PROTEIN 1A); DNA binding / protein binding [Arabidopsis thaliana] >gi55976605|sp|Q9M0V3.1|... |
| Match: gi|186511557|ref|NP_001118940.1| |
score: 1867 |
e-value: 0 |
Identity: 86.88% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DDB1A (DAMAGED DNA BINDING PROTEIN 1A); DNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|15233515|ref|NP_193842.1| |
score: 1858 |
e-value: 0 |
Identity: 85.69% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA binding / protein binding [Arabidopsis thaliana] >gi73620956|sp|... |
| Match: gi|62318656|dbj|BAD95136.1| |
score: 1856 |
e-value: 0 |
Identity: 85.6% |
Span: 3270bp (93.0%) |
Frame: 2 |
| UV-damaged DNA-binding protein- like [Arabidopsis thaliana] |
| Match: gi|115465791|ref|NP_001056495.1| |
score: 1808 |
e-value: 0 |
Identity: 82.95% |
Span: 3270bp (93.0%) |
Frame: 2 |
| Os05g0592400 [Oryza sativa (japonica cultivar-group)] >gi48475231|gb|AAT44300.1| putative DNA damage binding protein ... |
| Match: gi|12082087|dbj|BAB20761.1| |
score: 1802 |
e-value: 0 |
Identity: 82.68% |
Span: 3270bp (93.0%) |
Frame: 2 |
| UV-damaged DNA binding protein [Oryza sativa Japonica Group] |
| Match: gi|2911067|emb|CAA17529.1| |
score: 1797 |
e-value: 0 |
Identity: 82.97% |
Span: 3270bp (93.0%) |
Frame: 2 |
| UV-damaged DNA-binding protein-like [Arabidopsis thaliana] >gi7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-... |
| Match: gi|218197365|gb|EEC79792.1| |
score: 1774 |
e-value: 0 |
Identity: 81.79% |
Span: 3270bp (93.0%) |
Frame: 2 |
| hypothetical protein OsI_21216 [Oryza sativa Indica Group] |
| Match: gi|168066745|ref|XP_001785293.1| |
score: 1742 |
e-value: 0 |
Identity: 80.48% |
Span: 3270bp (93.0%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162663100|gb|EDQ49884.1| predicted protein [Physcomitrella... |
| Match: gi|168047617|ref|XP_001776266.1| |
score: 1716 |
e-value: 0 |
Identity: 79.29% |
Span: 3270bp (93.0%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162672361|gb|EDQ58899.1| predicted protein [Physcomitrella... |
| Match: gi|125595421|gb|EAZ35480.1| |
score: 1636 |
e-value: 0 |
Identity: 78.46% |
Span: 3111bp (88.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|110741229|dbj|BAF02165.1| |
score: 1260 |
e-value: 0 |
Identity: 86.83% |
Span: 2187bp (62.2%) |
Frame: 2 |
| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana] |
| Match: gi|145351726|ref|XP_001420218.1| |
score: 1143 |
e-value: 0 |
Identity: 55% |
Span: 3288bp (93.5%) |
Frame: 2 |
| predicted |
| Match: gi|219444719|ref|XP_002220120.1| |
score: 1136 |
e-value: 0 |
Identity: 52.82% |
Span: 3261bp (92.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|219475021|ref|XP_002234889.1| |
score: 1134 |
e-value: 0 |
Identity: 52.37% |
Span: 3261bp (92.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|147906138|ref|NP_001083624.1| |
score: 1127 |
e-value: 0 |
Identity: 52.71% |
Span: 3261bp (92.7%) |
Frame: 2 |
| damage-specific DNA binding protein 1, 127kDa [Xenopus laevis] >gi82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA d... |
| Match: gi|149062405|gb|EDM12828.1| |
score: 1123 |
e-value: 0 |
Identity: 52.36% |
Span: 3261bp (92.7%) |
Frame: 2 |
| damage-specific DNA binding protein 1 [Rattus norvegicus] |
| Match: gi|45383688|ref|NP_989547.1| |
score: 1123 |
e-value: 0 |
Identity: 52.44% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|45383688|ref|NP_989547.1| damage-specific DNA binding protein 1, 127kDa [Gallus gallus] >gi|28375613|dbj|BAC56999.... |
| Match: gi|73983859|ref|XP_533275.2| |
score: 1123 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|73983859|ref|XP_533275.2| PREDICTED: similar to DNA damage binding protein 1 (Damage-specific DNA binding protein ... |
| Match: gi|7657011|ref|NP_056550.1| |
score: 1122 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|7657011|ref|NP_056550.1| damage specific DNA binding protein 1; damage specific DNA binding protein 1 (127 kDa); D... |
| Match: gi|149725200|ref|XP_001502072.1| |
score: 1122 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|122692537|ref|NP_001073731.1| |
score: 1122 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|74215029|dbj|BAE33503.1| |
score: 1121 |
e-value: 0 |
Identity: 52.18% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus] |
| Match: gi|74138855|dbj|BAE27231.1| |
score: 1120 |
e-value: 0 |
Identity: 52.18% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus] |
| Match: gi|148529014|ref|NP_001914.3| |
score: 1120 |
e-value: 0 |
Identity: 52.18% |
Span: 3261bp (92.7%) |
Frame: 2 |
| damage-specific |
| Match: gi|197097564|ref|NP_001126613.1| |
score: 1119 |
e-value: 0 |
Identity: 52.09% |
Span: 3261bp (92.7%) |
Frame: 2 |
| damage-specific |
| Match: gi|418316|sp|P33194|DDB1_CERAE |
score: 1118 |
e-value: 0 |
Identity: 52.09% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|418316|sp|P33194|DDB1_CERAE DNA damage binding protein 1 (Damage-specific DNA binding protein 1) (DDB p127 subunit... |
| Match: gi|5353754|gb|AAD42230.1|AF159853_1 |
score: 1118 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| damage-specific |
| Match: gi|90108797|pdb|2B5L|A |
score: 1118 |
e-value: 0 |
Identity: 52.22% |
Span: 3261bp (92.7%) |
Frame: 2 |
| Chain |
| Match: gi|2632123|emb|CAA05770.1| |
score: 1116 |
e-value: 0 |
Identity: 52.01% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens] |
| Match: gi|74178494|dbj|BAE32502.1| |
score: 1112 |
e-value: 0 |
Identity: 52.09% |
Span: 3261bp (92.7%) |
Frame: 2 |
| gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus] |
| Match: gi|109105941|ref|XP_001082958.1| |
score: 1111 |
e-value: 0 |
Identity: 52.87% |
Span: 3195bp (90.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|215496735|gb|EEC06375.1| |
score: 1108 |
e-value: 0 |
Identity: 51.08% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA |
| Match: gi|81868411|sp|Q9ESW0|DDB1_RAT |
score: 1108 |
e-value: 0 |
Identity: 51.48% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA |
| Match: gi|119594342|gb|EAW73936.1| |
score: 1107 |
e-value: 0 |
Identity: 51.82% |
Span: 3261bp (92.7%) |
Frame: 2 |
| damage-specific |
| Match: gi|114637852|ref|XP_508472.2| |
score: 1102 |
e-value: 0 |
Identity: 51.99% |
Span: 3216bp (91.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|156389050|ref|XP_001634805.1| |
score: 1099 |
e-value: 0 |
Identity: 51.59% |
Span: 3258bp (92.6%) |
Frame: 2 |
| predicted |
| Match: gi|212510165|gb|EEB13380.1| |
score: 1070 |
e-value: 0 |
Identity: 49.09% |
Span: 3258bp (92.6%) |
Frame: 2 |
| DNA |
| Match: gi|91087281|ref|XP_975549.1| |
score: 1065 |
e-value: 0 |
Identity: 48.83% |
Span: 3261bp (92.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|119594339|gb|EAW73933.1| |
score: 1062 |
e-value: 0 |
Identity: 52.6% |
Span: 3081bp (87.6%) |
Frame: 2 |
| damage-specific |
| Match: gi|116060244|emb|CAL56303.1| |
score: 1056 |
e-value: 0 |
Identity: 55.21% |
Span: 3081bp (87.6%) |
Frame: 2 |
| putative |
| Match: gi|58383228|ref|XP_312466.2| |
score: 1045 |
e-value: 0 |
Identity: 48.29% |
Span: 3258bp (92.6%) |
Frame: 2 |
| ENSANGP00000003051 |
| Match: gi|157128864|ref|XP_001655231.1| |
score: 1041 |
e-value: 0 |
Identity: 47.86% |
Span: 3258bp (92.6%) |
Frame: 2 |
| DNA |
| Match: gi|170057515|ref|XP_001864517.1| |
score: 1037 |
e-value: 0 |
Identity: 47.95% |
Span: 3258bp (92.6%) |
Frame: 2 |
| conserved |
| Match: gi|159489018|ref|XP_001702494.1| |
score: 1035 |
e-value: 0 |
Identity: 49.48% |
Span: 3192bp (90.7%) |
Frame: 2 |
| UV-damaged |
| Match: gi|156545998|ref|XP_001607743.1| |
score: 1034 |
e-value: 0 |
Identity: 48.51% |
Span: 3258bp (92.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|66509028|ref|XP_396048.2| |
score: 1031 |
e-value: 0 |
Identity: 48.82% |
Span: 3258bp (92.6%) |
Frame: 2 |
| gi|66509028|ref|XP_396048.2| PREDICTED: similar to ENSANGP00000003051 [Apis mellifera] |
| Match: gi|198432471|ref|XP_002129229.1| |
score: 1025 |
e-value: 0 |
Identity: 48.65% |
Span: 3258bp (92.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|198432469|ref|XP_002129207.1| |
score: 1024 |
e-value: 0 |
Identity: 48.45% |
Span: 3258bp (92.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|193644722|ref|XP_001942922.1| |
score: 1014 |
e-value: 0 |
Identity: 46.64% |
Span: 3255bp (92.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|194901554|ref|XP_001980317.1| |
score: 988 |
e-value: 0 |
Identity: 47.39% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GG19434 |
| Match: gi|195500686|ref|XP_002097479.1| |
score: 985 |
e-value: 0 |
Identity: 47.13% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GE26244 |
| Match: gi|21357503|ref|NP_650257.1| |
score: 984 |
e-value: 0 |
Identity: 47.22% |
Span: 3258bp (92.6%) |
Frame: 2 |
| gi|21357503|ref|NP_650257.1| CG7769-PA [Drosophila melanogaster] gi|4928452|gb|AAD33592.1| damage-specific DNA bindin... |
| Match: gi|195329354|ref|XP_002031376.1| |
score: 982 |
e-value: 0 |
Identity: 47.3% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GM24084 |
| Match: gi|16197726|emb|CAC94909.1| |
score: 981 |
e-value: 0 |
Identity: 52.37% |
Span: 2829bp (80.4%) |
Frame: 2 |
| gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus] |
| Match: gi|195449948|ref|XP_002072297.1| |
score: 981 |
e-value: 0 |
Identity: 47.13% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GK22405 |
| Match: gi|195145844|ref|XP_002013900.1| |
score: 979 |
e-value: 0 |
Identity: 47.13% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GL24391 |
| Match: gi|125774475|ref|XP_001358496.1| |
score: 979 |
e-value: 0 |
Identity: 47.13% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GA20574-PA |
| Match: gi|194741158|ref|XP_001953056.1| |
score: 978 |
e-value: 0 |
Identity: 46.7% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GF17579 |
| Match: gi|195571247|ref|XP_002103615.1| |
score: 978 |
e-value: 0 |
Identity: 47.3% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GD18880 |
| Match: gi|148709424|gb|EDL41370.1| |
score: 966 |
e-value: 0 |
Identity: 52.57% |
Span: 2778bp (79.0%) |
Frame: 2 |
| damage |
| Match: gi|195395112|ref|XP_002056180.1| |
score: 964 |
e-value: 0 |
Identity: 46.17% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GJ10363 |
| Match: gi|195108657|ref|XP_001998909.1| |
score: 960 |
e-value: 0 |
Identity: 46.17% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GI23368 |
| Match: gi|195037449|ref|XP_001990173.1| |
score: 956 |
e-value: 0 |
Identity: 45.83% |
Span: 3258bp (92.6%) |
Frame: 2 |
| GH18378 |
| Match: gi|166240328|ref|XP_637896.2| |
score: 944 |
e-value: 0 |
Identity: 44.05% |
Span: 3252bp (92.4%) |
Frame: 2 |
| UV-damaged |
| Match: gi|195996153|ref|XP_002107945.1| |
score: 929 |
e-value: 0 |
Identity: 44.78% |
Span: 3258bp (92.6%) |
Frame: 2 |
| hypothetical |
| Match: gi|157128866|ref|XP_001655232.1| |
score: 906 |
e-value: 0 |
Identity: 48.37% |
Span: 2811bp (79.9%) |
Frame: 2 |
| DNA |
| Match: gi|1399512|gb|AAC47162.1| |
score: 887 |
e-value: 0 |
Identity: 43.46% |
Span: 3114bp (88.5%) |
Frame: 2 |
| repE |
| Match: gi|41055225|ref|NP_956920.1| |
score: 873 |
e-value: 0 |
Identity: 52.11% |
Span: 2550bp (72.5%) |
Frame: 2 |
| gi|41055225|ref|NP_956920.1| hypothetical protein MGC63840 [Danio rerio] >gi|34784892|gb|AAH56837.1| Hypothetical pro... |
| Match: gi|119594340|gb|EAW73934.1| |
score: 865 |
e-value: 0 |
Identity: 50.75% |
Span: 2619bp (74.4%) |
Frame: 2 |
| damage-specific |
| Match: gi|194389106|dbj|BAG61570.1| |
score: 852 |
e-value: 0 |
Identity: 50.82% |
Span: 2580bp (73.3%) |
Frame: 2 |
| unnamed |
| Match: gi|119594343|gb|EAW73937.1| |
score: 843 |
e-value: 0 |
Identity: 51.52% |
Span: 2499bp (71.0%) |
Frame: 2 |
| damage-specific |
| Match: gi|47230701|emb|CAF99894.1| |
score: 835 |
e-value: 0 |
Identity: 47.3% |
Span: 2853bp (81.1%) |
Frame: 2 |
| gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|194381178|dbj|BAG64157.1| |
score: 692 |
e-value: 0 |
Identity: 49.73% |
Span: 2097bp (59.6%) |
Frame: 2 |
| unnamed |
| Match: gi|193676418|ref|XP_001945395.1| |
score: 667 |
e-value: 0 |
Identity: 37.36% |
Span: 2982bp (84.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|17541566|ref|NP_502299.1| |
score: 606 |
e-value: 4e-171 |
Identity: 33.65% |
Span: 3258bp (92.6%) |
Frame: 2 |
| gi|17541566|ref|NP_502299.1| CPSF A subunit C-terminal (125.7 kD) (4M880) [Caenorhabditis elegans] gi|7506084|pir||T2... |
| Match: gi|157755611|ref|XP_001670149.1| |
score: 600 |
e-value: 2e-169 |
Identity: 33.88% |
Span: 3258bp (92.6%) |
Frame: 2 |
| Hypothetical |
| Match: gi|219125301|ref|XP_002182922.1| |
score: 588 |
e-value: 1e-165 |
Identity: 34.63% |
Span: 3222bp (91.6%) |
Frame: 2 |
| damage-specific |
| Match: gi|115721646|ref|XP_001197016.1| |
score: 538 |
e-value: 1e-150 |
Identity: 50.27% |
Span: 1533bp (43.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|74208347|dbj|BAE26370.1| |
score: 524 |
e-value: 3e-146 |
Identity: 51% |
Span: 1500bp (42.6%) |
Frame: 2 |
| gi|74208347|dbj|BAE26370.1| unnamed protein product [Mus musculus] |
| Match: gi|18377609|gb|AAL66955.1| |
score: 488 |
e-value: 2e-135 |
Identity: 89.3% |
Span: 813bp (23.1%) |
Frame: 2 |
| gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana] |
| Match: gi|167517245|ref|XP_001742963.1| |
score: 474 |
e-value: 3e-131 |
Identity: 29.62% |
Span: 3210bp (91.2%) |
Frame: 2 |
| hypothetical protein [Monosiga brevicollis MX1] >gi163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1] |
| Match: gi|189205943|ref|XP_001939306.1| |
score: 467 |
e-value: 4e-129 |
Identity: 29.06% |
Span: 3255bp (92.5%) |
Frame: 2 |
| DNA |
| Match: gi|170589357|ref|XP_001899440.1| |
score: 463 |
e-value: 4e-128 |
Identity: 39.14% |
Span: 1767bp (50.2%) |
Frame: 2 |
| CPSF |
| Match: gi|169611218|ref|XP_001799027.1| |
score: 463 |
e-value: 4e-128 |
Identity: 29.43% |
Span: 3195bp (90.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|218717557|gb|EED16978.1| |
score: 453 |
e-value: 6e-125 |
Identity: 30.86% |
Span: 3255bp (92.5%) |
Frame: 2 |
| UV-damaged |
| Match: gi|212539802|ref|XP_002150056.1| |
score: 444 |
e-value: 3e-122 |
Identity: 30.22% |
Span: 3255bp (92.5%) |
Frame: 2 |
| UV-damaged |
| Match: gi|169773185|ref|XP_001821061.1| |
score: 441 |
e-value: 3e-121 |
Identity: 30.05% |
Span: 3255bp (92.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|70992271|ref|XP_750984.1| |
score: 437 |
e-value: 3e-120 |
Identity: 29.41% |
Span: 3255bp (92.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|121699866|ref|XP_001268198.1| |
score: 435 |
e-value: 1e-119 |
Identity: 29.33% |
Span: 3255bp (92.5%) |
Frame: 2 |
| UV-damaged |
| Match: gi|115397303|ref|XP_001214243.1| |
score: 432 |
e-value: 8e-119 |
Identity: 29.14% |
Span: 3258bp (92.6%) |
Frame: 2 |
| conserved |
| Match: gi|119471789|ref|XP_001258220.1| |
score: 432 |
e-value: 1e-118 |
Identity: 29.65% |
Span: 3255bp (92.5%) |
Frame: 2 |
| UV-damaged |
| Match: gi|145240507|ref|XP_001392900.1| |
score: 417 |
e-value: 5e-114 |
Identity: 28.68% |
Span: 3252bp (92.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|211590785|emb|CAP96985.1| |
score: 415 |
e-value: 2e-113 |
Identity: 28.51% |
Span: 3255bp (92.5%) |
Frame: 2 |
| Pc21g20880 |
| Match: gi|67516629|ref|XP_658200.1| |
score: 415 |
e-value: 1e-113 |
Identity: 28.6% |
Span: 3258bp (92.6%) |
Frame: 2 |
| hypothetical |
| Match: gi|194389106|dbj|BAG61570.1| |
score: 104 |
e-value: 5e-20 |
Identity: 48.18% |
Span: 309bp (8.8%) |
Frame: 2 |
| unnamed |
| Match: gi|194381178|dbj|BAG64157.1| |
score: 99.8 |
e-value: 2e-18 |
Identity: 56.1% |
Span: 246bp (7.0%) |
Frame: 2 |
| unnamed |
|
| 158 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At4G05420.1 |
score: 1924 |
e-value: 0 |
Identity: 88.81% |
Span: 3270bp (93.0%) |
Frame: 2 |
| Symbols: DDB1A | DDB1A (UV-damaged DNA-binding protein 1A); DNA binding | chr4:2746285-2752660 FORWARD |
| Match: At4G21100.1 |
score: 1858 |
e-value: 0 |
Identity: 85.69% |
Span: 3270bp (93.0%) |
Frame: 2 |
| Symbols: DDB1B | DDB1B (DAMAGED DNA BINDING PROTEIN 1 B) | chr4:11258927-11265320 REVERSE |
| Match: At3G55220.1 |
score: 233 |
e-value: 6e-61 |
Identity: 23% |
Span: 3240bp (92.1%) |
Frame: 2 |
| splicing factor, putative | chr3:20478093-20481921 REVERSE |
| Match: At3G55200.1 |
score: 233 |
e-value: 6e-61 |
Identity: 23% |
Span: 3240bp (92.1%) |
Frame: 2 |
| splicing factor, putative | chr3:20471510-20475338 FORWARD |
| Match: At3G11960.1 |
score: 114 |
e-value: 5e-25 |
Identity: 21.94% |
Span: 1515bp (43.1%) |
Frame: 2 |
| cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein | chr3:3786437... |
| Match: At3G11960.2 |
score: 114 |
e-value: 5e-25 |
Identity: 21.94% |
Span: 1515bp (43.1%) |
Frame: 2 |
| cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein | chr3:3786437... |
| Match: At5G51660.1 |
score: 74.3 |
e-value: 5e-13 |
Identity: 26.45% |
Span: 786bp (22.3%) |
Frame: 2 |
| cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein | chr5:2099747... |
|
| swissprot [blastx] | Showing best 39 hits recorded |
| Match: Q6QNU4 |
score: 2126 |
e-value: 0 |
Identity: 100% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1 |
| Match: Q6E7D1 |
score: 2120 |
e-value: 0 |
Identity: 99.54% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1 |
| Match: Q9M0V3 |
score: 1924 |
e-value: 0 |
Identity: 88.81% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1 |
| Match: O49552 |
score: 1858 |
e-value: 0 |
Identity: 85.69% |
Span: 3270bp (93.0%) |
Frame: 2 |
| DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=1 SV=2 |
| Match: Q805F9 |
score: 1123 |
e-value: 0 |
Identity: 52.44% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1 |
| Match: A1A4K3 |
score: 1122 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Bos taurus GN=DDB1 PE=2 SV=1 |
| Match: Q3U1J4 |
score: 1122 |
e-value: 0 |
Identity: 52.27% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Mus musculus GN=Ddb1 PE=1 SV=2 |
| Match: Q16531 |
score: 1120 |
e-value: 0 |
Identity: 52.18% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1 |
| Match: Q5R649 |
score: 1119 |
e-value: 0 |
Identity: 52.09% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1 |
| Match: P33194 |
score: 1118 |
e-value: 0 |
Identity: 52.09% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Cercopithecus aethiops GN=DDB1 PE=1 SV=1 |
| Match: Q9ESW0 |
score: 1108 |
e-value: 0 |
Identity: 51.48% |
Span: 3261bp (92.7%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Rattus norvegicus GN=Ddb1 PE=2 SV=1 |
| Match: O13807 |
score: 400 |
e-value: 4e-110 |
Identity: 26.72% |
Span: 3255bp (92.5%) |
Frame: 2 |
| DNA damage-binding protein 1 OS=Schizosaccharomyces pombe GN=ddb1 PE=1 SV=1 |
| Match: Q54SA7 |
score: 242 |
e-value: 1e-62 |
Identity: 21.94% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Probable splicing factor 3B subunit 3 OS=Dictyostelium discoideum GN=sf3b3 PE=3 SV=1 |
| Match: Q4WLI5 |
score: 219 |
e-value: 9e-56 |
Identity: 23.96% |
Span: 3246bp (92.3%) |
Frame: 2 |
| Pre-mRNA-splicing factor rse1 OS=Aspergillus fumigatus GN=rse1 PE=3 SV=1 |
| Match: Q1LVE8 |
score: 216 |
e-value: 1e-54 |
Identity: 21.69% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Splicing factor 3B subunit 3 OS=Danio rerio GN=sf3b3 PE=2 SV=1 |
| Match: Q15393 |
score: 210 |
e-value: 5e-53 |
Identity: 21.77% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Splicing factor 3B subunit 3 OS=Homo sapiens GN=SF3B3 PE=1 SV=4 |
| Match: Q921M3 |
score: 210 |
e-value: 5e-53 |
Identity: 21.77% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Splicing factor 3B subunit 3 OS=Mus musculus GN=Sf3b3 PE=2 SV=1 |
| Match: A0JN52 |
score: 210 |
e-value: 5e-53 |
Identity: 21.77% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Splicing factor 3B subunit 3 OS=Bos taurus GN=SF3B3 PE=2 SV=1 |
| Match: Q5RBI5 |
score: 209 |
e-value: 7e-53 |
Identity: 21.77% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Splicing factor 3B subunit 3 OS=Pongo abelii GN=SF3B3 PE=2 SV=1 |
| Match: Q52E49 |
score: 207 |
e-value: 3e-52 |
Identity: 24.07% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Pre-mRNA-splicing factor RSE1 OS=Magnaporthe grisea GN=RSE1 PE=3 SV=2 |
| Match: Q7RYR4 |
score: 207 |
e-value: 3e-52 |
Identity: 24.24% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Pre-mRNA-splicing factor rse-1 OS=Neurospora crassa GN=rse-1 PE=3 SV=2 |
| Match: Q9UTT2 |
score: 206 |
e-value: 8e-52 |
Identity: 22.63% |
Span: 3252bp (92.4%) |
Frame: 2 |
| Pre-mRNA-splicing factor rse1 OS=Schizosaccharomyces pombe GN=prp12 PE=1 SV=1 |
| Match: Q5B1X8 |
score: 203 |
e-value: 6e-51 |
Identity: 23.4% |
Span: 3234bp (91.9%) |
Frame: 2 |
| Pre-mRNA-splicing factor rse1 OS=Emericella nidulans GN=rse1 PE=3 SV=1 |
| Match: Q5KP25 |
score: 190 |
e-value: 6e-47 |
Identity: 23.74% |
Span: 3237bp (92.0%) |
Frame: 2 |
| Pre-mRNA-splicing factor RSE1 OS=Cryptococcus neoformans GN=RSE1 PE=3 SV=1 |
| Match: Q4PGM6 |
score: 174 |
e-value: 4e-42 |
Identity: 22.08% |
Span: 3243bp (92.2%) |
Frame: 2 |
| Pre-mRNA-splicing factor RSE1 OS=Ustilago maydis GN=RSE1 PE=3 SV=1 |
| Match: Q6BYK1 |
score: 138 |
e-value: 3e-31 |
Identity: 21.06% |
Span: 3255bp (92.5%) |
Frame: 2 |
| Pre-mRNA-splicing factor RSE1 OS=Debaryomyces hansenii GN=RSE1 PE=3 SV=2 |
| Match: Q5A7S5 |
score: 109 |
e-value: 1e-22 |
Identity: 20.13% |
Span: 3255bp (92.5%) |
Frame: 2 |
| Pre-mRNA-splicing factor RSE1 OS=Candida albicans GN=RSE1 PE=3 SV=1 |
| Match: Q9EPU4 |
score: 94 |
e-value: 5e-18 |
Identity: 23.28% |
Span: 1260bp (35.8%) |
Frame: 2 |
| Cleavage and polyadenylation specificity factor subunit 1 OS=Mus musculus GN=Cpsf1 PE=1 SV=1 |
| Match: Q10570 |
score: 93.2 |
e-value: 9e-18 |
Identity: 23.79% |
Span: 1260bp (35.8%) |
Frame: 2 |
| Cleavage and polyadenylation specificity factor subunit 1 OS=Homo sapiens GN=CPSF1 PE=1 SV=2 |
| Match: Q9V726 |
score: 93.2 |
e-value: 9e-18 |
Identity: 23.85% |
Span: 1152bp (32.7%) |
Frame: 2 |
| Cleavage and polyadenylation specificity factor subunit 1 OS=Drosophila melanogaster GN=Cpsf160 PE=1 SV=1 |
| Match: Q10569 |
score: 91.7 |
e-value: 3e-17 |
Identity: 23.08% |
Span: 1260bp (35.8%) |
Frame: 2 |
| Cleavage and polyadenylation specificity factor subunit 1 OS=Bos taurus GN=CPSF1 PE=1 SV=1 |
| Match: Q7XWP1 |
score: 89 |
e-value: 2e-16 |
Identity: 23.93% |
Span: 999bp (28.4%) |
Frame: 2 |
| Probable cleavage and polyadenylation specificity factor subunit 1 OS=Oryza sativa subsp. japonica GN=Os04g0252200 PE... |
| Match: Q4WCL1 |
score: 83.2 |
e-value: 1e-14 |
Identity: 22.25% |
Span: 1143bp (32.5%) |
Frame: 2 |
| Protein cft1 OS=Aspergillus fumigatus GN=cft1 PE=3 SV=2 |
| Match: Q9N4C2 |
score: 82.4 |
e-value: 2e-14 |
Identity: 23.96% |
Span: 894bp (25.4%) |
Frame: 2 |
| Probable cleavage and polyadenylation specificity factor subunit 1 OS=Caenorhabditis elegans GN=Y76B12C.7 |
| Match: A1DB13 |
score: 82.4 |
e-value: 2e-14 |
Identity: 22.07% |
Span: 1143bp (32.5%) |
Frame: 2 |
| Protein cft1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=cft1 |
| Match: A1C3U1 |
score: 81.3 |
e-value: 4e-14 |
Identity: 22.48% |
Span: 1137bp (32.3%) |
Frame: 2 |
| Protein cft1 OS=Aspergillus clavatus GN=cft1 |
| Match: Q5BDG7 |
score: 79.3 |
e-value: 1e-13 |
Identity: 20.64% |
Span: 1146bp (32.6%) |
Frame: 2 |
| Protein cft1 OS=Emericella nidulans GN=cft1 |
| Match: A2R919 |
score: 76.3 |
e-value: 1e-12 |
Identity: 20.54% |
Span: 1146bp (32.6%) |
Frame: 2 |
| Protein cft1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cft1 |
| Match: Q9FGR0 |
score: 74.3 |
e-value: 4e-12 |
Identity: 26.45% |
Span: 786bp (22.3%) |
Frame: 2 |
| Cleavage and polyadenylation specificity factor subunit 1 OS=Arabidopsis thaliana GN=CPSF160 PE=1 SV=2 |
|
