| genbank/nr [blastx] | Showing best 87 hits recorded |
| Match: gi|2119045|pir||S59117 |
score: 115.9 |
e-value: 1.2e-25 |
Identity: 97.37% |
Span: 228bp (64.6%) |
Frame: 1 |
| gi|2119045|pir||S59117 small nuclear ribonucleoprotein U1A - potato gi|1050840|emb|CAA90282.1| U1snRNP-specific prote... |
| Match: gi|34897622|ref|NP_910157.1| |
score: 98.6 |
e-value: 2e-20 |
Identity: 85.53% |
Span: 228bp (64.6%) |
Frame: 1 |
| gi|34897622|ref|NP_910157.1| putative small nuclear ribonucleoprotein U1A [Oryza sativa] gi|14595706|gb|AAK70905.1| p... |
| Match: gi|31240911|ref|XP_320869.1| |
score: 91.28 |
e-value: 3.2e-18 |
Identity: 72% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|31240911|ref|XP_320869.1| ENSANGP00000019197 [Anopheles gambiae] gi|21288097|gb|EAA00418.1| ENSANGP00000019197 [An... |
| Match: gi|1431699|pdb|1URN|A |
score: 90.51 |
e-value: 5.5e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|1431699|pdb|1URN|A Chain A, U1aRNA COMPLEX gi|1431701|pdb|1URN|B Chain B, U1aRNA COMPLEX gi|1431703|pdb|1URN|C Cha... |
| Match: gi|2982060|pdb|1AUD|A |
score: 90.51 |
e-value: 5.5e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|2982060|pdb|1AUD|A Chain A, U1a-Utrrna, Nmr, 31 Structures |
| Match: gi|7546344|pdb|1DZ5|A |
score: 90.51 |
e-value: 5.5e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|7546344|pdb|1DZ5|A Chain A, The Nmr Structure Of The 38kda U1a Protein-Pie Rna Complex Reveals The Basis Of Cooper... |
| Match: gi|22219383|pdb|1M5K|C |
score: 90.51 |
e-value: 5.5e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|22219383|pdb|1M5K|C Chain C, Crystal Structure Of A Hairpin Ribozyme In The Catalytically-Active Conformation gi|2... |
| Match: gi|15226631|ref|NP_182280.1| |
score: 90.12 |
e-value: 7.1e-18 |
Identity: 77.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| U1A (SPLICEOSOMAL PROTEIN U1A); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi105... |
| Match: gi|1633231|pdb|1FHT| |
score: 89.74 |
e-value: 9.3e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|1633231|pdb|1FHT| Rna-Binding Domain Of The U1a Spliceosomal Protein U1a117, Nmr, 43 Structures |
| Match: gi|34855379|ref|XP_214845.2| |
score: 89.74 |
e-value: 9.3e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|34855379|ref|XP_214845.2| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Rattus norvegicus] |
| Match: gi|33357758|pdb|1OIA|A |
score: 89.74 |
e-value: 9.3e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|33357758|pdb|1OIA|A Chain A, U1a Rnp Domain 1-95 gi|33357759|pdb|1OIA|B Chain B, U1a Rnp Domain 1-95 |
| Match: gi|4759156|ref|NP_004587.1| |
score: 89.74 |
e-value: 9.3e-18 |
Identity: 76% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein polypeptide A [Homo sapiens] gi|134092|sp|P09012|RU1A_HUM... |
| Match: gi|1173326|sp|P45429|RU1A_XENLA |
score: 87.81 |
e-value: 3.5e-17 |
Identity: 74.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|1173326|sp|P45429|RU1A_XENLA U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) gi|345608|pir||S30564 small... |
| Match: gi|27924189|gb|AAH44979.1| |
score: 87.81 |
e-value: 3.5e-17 |
Identity: 74.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis] |
| Match: gi|17737284|ref|NP_511045.1| |
score: 87.43 |
e-value: 4.6e-17 |
Identity: 75.68% |
Span: 222bp (62.9%) |
Frame: 1 |
| gi|17737284|ref|NP_511045.1| sans fille CG4528-PA [Drosophila melanogaster] gi|1173325|sp|P43332|RU1A_DROME U1 small ... |
| Match: gi|25294325|pir||C86204 |
score: 87.04 |
e-value: 6e-17 |
Identity: 70.18% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|25294325|pir||C86204 hypothetical protein [imported] - Arabidopsis thaliana gi|8954049|gb|AAF82223.1| Strong simil... |
| Match: gi|30679892|ref|NP_850936.1| |
score: 87.04 |
e-value: 6e-17 |
Identity: 70.18% |
Span: 171bp (48.4%) |
Frame: 1 |
| small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana] >gi23296313|gb|... |
| Match: gi|543325|pir||S42114 |
score: 87.04 |
e-value: 6e-17 |
Identity: 73.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|543325|pir||S42114 small nuclear ribonucleoprotein U1A - mouse gi|349004|gb|AAC37611.1| small nuclear RNA gi|13096... |
| Match: gi|31980689|ref|NP_056597.2| |
score: 87.04 |
e-value: 6e-17 |
Identity: 73.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein polypeptide A; protein A of the U1 small nuclear RNA; U1... |
| Match: gi|30679897|ref|NP_172177.3| |
score: 87.04 |
e-value: 6e-17 |
Identity: 70.18% |
Span: 171bp (48.4%) |
Frame: 1 |
| small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana] |
| Match: gi|19347861|gb|AAL85989.1| |
score: 87.04 |
e-value: 6e-17 |
Identity: 70.18% |
Span: 171bp (48.4%) |
Frame: 1 |
| putative spliceosomal protein (U2B) [Arabidopsis thaliana] |
| Match: gi|37748043|gb|AAH59527.1| |
score: 86.66 |
e-value: 7.9e-17 |
Identity: 68% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|37748043|gb|AAH59527.1| Unknown (protein for IMAGE:4201535) [Danio rerio] |
| Match: gi|6730009|pdb|1DRZ|A |
score: 86.27 |
e-value: 1e-16 |
Identity: 73.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|6730009|pdb|1DRZ|A Chain A, U1a Spliceosomal ProteinHEPATITIS DELTA VIRUS GENOMIC Ribozyme Complex |
| Match: gi|6137598|pdb|1CX0|A |
score: 86.27 |
e-value: 1e-16 |
Identity: 73.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|6137598|pdb|1CX0|A Chain A, Hepatitis Delta Virus Ribozyme |
| Match: gi|38073622|ref|XP_138180.3| |
score: 84.73 |
e-value: 3e-16 |
Identity: 73.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|38073622|ref|XP_138180.3| similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|421960|pir||S34448 |
score: 84.73 |
e-value: 3e-16 |
Identity: 68% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|421960|pir||S34448 small nuclear ribonucleoprotein U2B'' - potato gi|169589|gb|AAA33847.1| spliceosomal protein |
| Match: gi|3659937|pdb|1A9N|B |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|3659937|pdb|1A9N|B Chain B, U2 B''A'RNA TERNARY COMPLEX gi|3659938|pdb|1A9N|D Chain D, U2 B''A'RNA TERNARY COMPLEX |
| Match: gi|12836810|dbj|BAB23823.1| |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|12836810|dbj|BAB23823.1| unnamed protein product [Mus musculus] |
| Match: gi|27692318|gb|AAH08311.1| |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|27692318|gb|AAH08311.1| Similar to small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens] |
| Match: gi|23956110|ref|NP_067310.1| |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B [Mus musculus] gi|12847289|dbj|BAB27510.1| unnamed ... |
| Match: gi|34858820|ref|XP_342529.1| |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|34858820|ref|XP_342529.1| similar to U2 small nuclear ribonucleoprotein B [Rattus norvegicus] |
| Match: gi|4507123|ref|NP_003083.1| |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|4507123|ref|NP_003083.1| small nuclear ribonucleoprotein polypeptide B''; U2 small nuclear ribonucleoprotein B'' [... |
| Match: gi|12850013|dbj|BAB28565.1| |
score: 83.96 |
e-value: 5.1e-16 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus] |
| Match: gi|15227729|ref|NP_180585.1| |
score: 83.19 |
e-value: 8.7e-16 |
Identity: 66.67% |
Span: 171bp (48.4%) |
Frame: 1 |
| U2B'' (U2 small nuclear ribonucleoprotein B); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis th... |
| Match: gi|38093549|ref|XP_358059.1| |
score: 81.65 |
e-value: 2.5e-15 |
Identity: 70.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|38093549|ref|XP_358059.1| similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|38090057|ref|XP_356179.1| |
score: 81.65 |
e-value: 2.5e-15 |
Identity: 69.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|38090057|ref|XP_356179.1| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Mus musculus] |
| Match: gi|17541322|ref|NP_500505.1| |
score: 81.26 |
e-value: 3.3e-15 |
Identity: 66.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|17541322|ref|NP_500505.1| small nuclear ribonucleoprotein (rnp-3) [Caenorhabditis elegans] gi|7505521|pir||T29388 ... |
| Match: gi|21593001|gb|AAM64950.1| |
score: 80.49 |
e-value: 5.7e-15 |
Identity: 64.91% |
Span: 171bp (48.4%) |
Frame: 1 |
| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana] |
| Match: gi|38093673|ref|XP_111314.2| |
score: 78.57 |
e-value: 2.2e-14 |
Identity: 69.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|38093673|ref|XP_111314.2| similar to GLE1-like, RNA export mediator; GLE1 (yeast homolog)-like, RNA export mediato... |
| Match: gi|38073944|ref|XP_354725.1| |
score: 78.57 |
e-value: 2.2e-14 |
Identity: 69.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|38073944|ref|XP_354725.1| similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|17541324|ref|NP_500504.1| |
score: 70.48 |
e-value: 5.9e-12 |
Identity: 57.89% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|17541324|ref|NP_500504.1| small nuclear ribonucleoprotein (rnp-2) [Caenorhabditis elegans] gi|15055398|gb|AAA98032... |
| Match: gi|38093624|ref|XP_358084.1| |
score: 66.63 |
e-value: 8.5e-11 |
Identity: 58.82% |
Span: 153bp (43.3%) |
Frame: 1 |
| gi|38093624|ref|XP_358084.1| similar to small nuclear RNA [Mus musculus] |
| Match: gi|38081798|ref|XP_354985.1| |
score: 63.16 |
e-value: 9.4e-10 |
Identity: 62.67% |
Span: 225bp (63.7%) |
Frame: 1 |
| gi|38081798|ref|XP_354985.1| similar to small nuclear RNA [Mus musculus] |
| Match: gi|19113216|ref|NP_596424.1| |
score: 62 |
e-value: 2.1e-09 |
Identity: 48.21% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|19113216|ref|NP_596424.1| Small nuclear ribonucleoprotein [Schizosaccharomyces pombe] gi|7493412|pir||T40479 small... |
| Match: gi|7505522|pir||T29387 |
score: 57.77 |
e-value: 3.9e-08 |
Identity: 52.63% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|7505522|pir||T29387 hypothetical protein K08D10.4 - Caenorhabditis elegans |
| Match: gi|38111102|gb|EAA56730.1| |
score: 57.77 |
e-value: 3.9e-08 |
Identity: 42.86% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|38111102|gb|EAA56730.1| hypothetical protein MG07085.4 [Magnaporthe grisea 70-15] |
| Match: gi|32416524|ref|XP_328740.1| |
score: 55.45 |
e-value: 2e-07 |
Identity: 42.59% |
Span: 162bp (45.9%) |
Frame: 1 |
| gi|32416524|ref|XP_328740.1| hypothetical protein [Neurospora crassa] gi|28924315|gb|EAA33468.1| hypothetical protein... |
| Match: gi|38103960|gb|EAA50592.1| |
score: 53.14 |
e-value: 9.7e-07 |
Identity: 35.09% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|38103960|gb|EAA50592.1| hypothetical protein MG04351.4 [Magnaporthe grisea 70-15] |
| Match: gi|23481350|gb|EAA17655.1| |
score: 52.76 |
e-value: 1.3e-06 |
Identity: 39.29% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|23481350|gb|EAA17655.1| u1 small nuclear ribonucleoprotein a [Plasmodium yoelii yoelii] |
| Match: gi|32418980|ref|XP_329968.1| |
score: 52.76 |
e-value: 1.3e-06 |
Identity: 37.5% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|32418980|ref|XP_329968.1| hypothetical protein [Neurospora crassa] gi|28926050|gb|EAA35039.1| hypothetical protein... |
| Match: gi|19112345|ref|NP_595553.1| |
score: 50.83 |
e-value: 4.8e-06 |
Identity: 40.35% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|19112345|ref|NP_595553.1| spliceosomal protein [Schizosaccharomyces pombe] gi|2257544|dbj|BAA21437.1| spliceosomal... |
| Match: gi|19112363|ref|NP_595571.1| |
score: 50.83 |
e-value: 4.8e-06 |
Identity: 40.35% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|19112363|ref|NP_595571.1| U2 b'-like spliceosomal protein; similar to S. cerevisiae MSL1; U2 snRNA-associated prot... |
| Match: gi|23619006|ref|NP_704968.1| |
score: 46.98 |
e-value: 6.9e-05 |
Identity: 35.71% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|23619006|ref|NP_704968.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium falciparum 3D7] gi|23615213|e... |
| Match: gi|37595358|gb|AAQ94565.1| |
score: 46.98 |
e-value: 6.9e-05 |
Identity: 44.07% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio] |
| Match: gi|29436819|gb|AAH49509.1| |
score: 45.44 |
e-value: 0.0002 |
Identity: 42.37% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|29436819|gb|AAH49509.1| Unknown (protein for MGC:56625) [Danio rerio] |
| Match: gi|32398796|emb|CAD98506.1| |
score: 45.05 |
e-value: 0.00026 |
Identity: 39.19% |
Span: 222bp (62.9%) |
Frame: 1 |
| gi|32398796|emb|CAD98506.1| U1 snrnp, possible [Cryptosporidium parvum] |
| Match: gi|23485600|gb|EAA20485.1| |
score: 43.13 |
e-value: 0.001 |
Identity: 34.55% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|34881706|ref|XP_229192.2| |
score: 40.82 |
e-value: 0.005 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|34881706|ref|XP_229192.2| similar to heterogeneous nuclear ribonucleoprotein G - human [Rattus norvegicus] |
| Match: gi|5579009|emb|CAB51361.1| |
score: 40.82 |
e-value: 0.005 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus] |
| Match: gi|4504451|ref|NP_002130.1| |
score: 40.82 |
e-value: 0.005 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|4504451|ref|NP_002130.1| RNA binding motif protein, X chromosome [Homo sapiens] gi|3256007|emb|CAA80599.1| hnRNP G... |
| Match: gi|23503093|sp|P38159|ROG_HUMAN |
score: 40.82 |
e-value: 0.005 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|23503093|sp|P38159|ROG_HUMAN Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA binding motif protein, X chr... |
| Match: gi|6755296|ref|NP_035382.1| |
score: 40.82 |
e-value: 0.005 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|6755296|ref|NP_035382.1| RNA binding motif protein, X chromosome [Mus musculus] gi|5579011|emb|CAB51362.1| heterog... |
| Match: gi|542850|pir||S41766 |
score: 40.82 |
e-value: 0.005 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human |
| Match: gi|15030328|gb|AAH11441.1| |
score: 40.43 |
e-value: 0.006 |
Identity: 36.67% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|15030328|gb|AAH11441.1| RNA binding motif protein, X chromosome retrogene [Mus musculus] gi|26334797|dbj|BAC31099.... |
| Match: gi|4104336|gb|AAD01997.1| |
score: 40.05 |
e-value: 0.008 |
Identity: 36.67% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii] |
| Match: gi|34303937|ref|NP_689798.1| |
score: 39.66 |
e-value: 0.011 |
Identity: 37.93% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|34303937|ref|NP_689798.1| RNA binding motif protein, Y-linked, family 1 [Homo sapiens] gi|20987385|gb|AAH30018.1| ... |
| Match: gi|631384|pir||B49418 |
score: 39.66 |
e-value: 0.011 |
Identity: 37.93% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|631384|pir||B49418 spermatogenesis factor AZF (clone MK29) - human |
| Match: gi|4379044|emb|CAA53660.1| |
score: 39.66 |
e-value: 0.011 |
Identity: 37.93% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|4379044|emb|CAA53660.1| YRRM2 [Homo sapiens] |
| Match: gi|10880789|gb|AAG24388.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 34.48% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|10880789|gb|AAG24388.1| PP239 protein [Homo sapiens] |
| Match: gi|1033165|gb|AAC16917.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 37.93% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|1033165|gb|AAC16917.1| Y-chromosome RNA recognition motif protein [Homo sapiens] |
| Match: gi|34925229|sp|Q86U06|RNP4_HUMAN |
score: 39.28 |
e-value: 0.014 |
Identity: 34.48% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|34925229|sp|Q86U06|RNP4_HUMAN RNA-binding region containing protein 4 (Splicing factor SF2) (PP239) gi|28071058|em... |
| Match: gi|21361702|ref|NP_060577.2| |
score: 39.28 |
e-value: 0.014 |
Identity: 34.48% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|21361702|ref|NP_060577.2| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] gi|12803481|gb|AAH02566.1| RN... |
| Match: gi|18848317|gb|AAH24208.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 34.48% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|18848317|gb|AAH24208.1| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] |
| Match: gi|7022544|dbj|BAA91638.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 34.48% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens] |
| Match: gi|21361809|ref|NP_062556.2| |
score: 39.28 |
e-value: 0.014 |
Identity: 36.67% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|21361809|ref|NP_062556.2| hypothetical protein 669 [Homo sapiens] gi|15277908|gb|AAH12942.1| Hypothetical protein ... |
| Match: gi|4826974|ref|NP_005049.1| |
score: 39.28 |
e-value: 0.014 |
Identity: 37.93% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|4826974|ref|NP_005049.1| RNA binding motif protein, Y-linked, family 1, member A1; RNA binding motif protein 1; RN... |
| Match: gi|4098582|gb|AAD00328.1| |
score: 38.89 |
e-value: 0.019 |
Identity: 35.59% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura] |
| Match: gi|34851585|ref|XP_226369.2| |
score: 38.89 |
e-value: 0.019 |
Identity: 35% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|34851585|ref|XP_226369.2| similar to heterogeneous nuclear ribonucleoprotein G - human [Rattus norvegicus] |
| Match: gi|19913534|gb|AAH26077.1| |
score: 38.12 |
e-value: 0.032 |
Identity: 39.29% |
Span: 162bp (45.9%) |
Frame: 1 |
| gi|19913534|gb|AAH26077.1| MGC26641 protein [Homo sapiens] |
| Match: gi|37540338|ref|XP_291312.2| |
score: 38.12 |
e-value: 0.032 |
Identity: 38.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|37540338|ref|XP_291312.2| similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA binding motif protei... |
| Match: gi|23487965|gb|EAA21186.1| |
score: 37.74 |
e-value: 0.042 |
Identity: 36.21% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related [Plasmodium yoelii yoelii] |
| Match: gi|8927581|gb|AAF82129.1| |
score: 37.35 |
e-value: 0.055 |
Identity: 37.29% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|8927581|gb|AAF82129.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo sapiens] |
| Match: gi|6677685|ref|NP_033059.1| |
score: 37.35 |
e-value: 0.055 |
Identity: 33.33% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|6677685|ref|NP_033059.1| RNA binding motif protein, X chromosome retrogene; hnRNP G [Mus musculus] gi|3914804|sp|O... |
| Match: gi|37541318|ref|XP_089909.3| |
score: 37.35 |
e-value: 0.055 |
Identity: 31.58% |
Span: 171bp (48.4%) |
Frame: 1 |
| gi|37541318|ref|XP_089909.3| similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA binding motif protei... |
| Match: gi|23613861|ref|NP_704882.1| |
score: 36.96 |
e-value: 0.072 |
Identity: 30.91% |
Span: 165bp (46.7%) |
Frame: 1 |
| gi|23613861|ref|NP_704882.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium falciparum 3D7] gi|2350524... |
| Match: gi|35505506|gb|AAH57796.1| |
score: 36.58 |
e-value: 0.094 |
Identity: 37.29% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|35505506|gb|AAH57796.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo sapiens] |
| Match: gi|8850217|ref|NP_055284.2| |
score: 36.58 |
e-value: 0.094 |
Identity: 37.29% |
Span: 168bp (47.6%) |
Frame: 1 |
| gi|8850217|ref|NP_055284.2| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo sapiens] gi|8576316|gb|A... |
|
| arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
| Match: At2g47580.1 |
score: 90.12 |
e-value: 1.9e-19 |
Identity: 77.33% |
Span: 225bp (63.7%) |
Frame: 1 |
| At2g47580.1 68409.m05362 small nuclear ribonucleoprotein (spliceosomal protein) U1A identical to GB:Z49991 U1snRNP-sp... |
| Match: At1g06960.1 |
score: 87.04 |
e-value: 1.6e-18 |
Identity: 70.18% |
Span: 171bp (48.4%) |
Frame: 1 |
| At1g06960.1 68408.m09157 small nuclear ribonucleoprotein U2B (spliceosomal protein), putative non-consensus splice do... |
| Match: At1g06960.2 |
score: 87.04 |
e-value: 1.6e-18 |
Identity: 70.18% |
Span: 171bp (48.4%) |
Frame: 1 |
| At1g06960.2 68408.m09158 small nuclear ribonucleoprotein U2B (spliceosomal protein), putative non-consensus splice do... |
| Match: At2g30260.1 |
score: 83.19 |
e-value: 2.3e-17 |
Identity: 66.67% |
Span: 171bp (48.4%) |
Frame: 1 |
| At2g30260.1 68409.m03337 small nuclear ribonucleoprotein U2B (spliceosomal protein), putative similar to spliceosomal... |
| Match: At4g12630.1 |
score: 32.73 |
e-value: 0.036 |
Identity: 38.46% |
Span: 156bp (44.2%) |
Frame: 1 |
| At4g12630.1 68411.m01802 RNA recognition motif (RRM) - containing protein similar to serine/arginine rich protein SF2... |
| Match: At3g47120.1 |
score: 31.96 |
e-value: 0.061 |
Identity: 39.58% |
Span: 135bp (38.2%) |
Frame: 1 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g12190.1 |
score: 31.57 |
e-value: 0.079 |
Identity: 30.43% |
Span: 138bp (39.1%) |
Frame: 1 |
| At5g12190.1 68412.m01323 RNA recognition motif (RRM) - containing protein similar to SP|P52298 20 kDa nuclear cap bin... |
| Match: At5g07290.1 |
score: 31.57 |
e-value: 0.079 |
Identity: 29.09% |
Span: 165bp (46.7%) |
Frame: 1 |
| At5g07290.1 68412.m00769 Meiosis protein mei2-related Mei2-like protein - Arabidopsis thaliana, EMBL:D86122 |
| Match: At1g09230.1 |
score: 31.57 |
e-value: 0.079 |
Identity: 47.06% |
Span: 102bp (28.9%) |
Frame: 1 |
| At1g09230.1 68408.m00923 RNA recognition motif (RRM) - containing protein contains INTERPRO:IPR000504 RNA-binding reg... |
|
