| genbank/nr [blastx] | Showing best 60 hits recorded |
| Match: gi|38344416|emb|CAE02382.2| |
score: 49.68 |
e-value: 1.1e-05 |
Identity: 44.64% |
Span: 168bp (43.8%) |
Frame: 1 |
| OSJNBb0080H08.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344663|emb|CAE02325.2| |
score: 48.91 |
e-value: 1.8e-05 |
Identity: 36.07% |
Span: 183bp (47.7%) |
Frame: 1 |
| gi|38344663|emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344873|emb|CAE01299.2| |
score: 48.52 |
e-value: 2.4e-05 |
Identity: 34.43% |
Span: 183bp (47.7%) |
Frame: 1 |
| gi|38344873|emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37534848|ref|NP_921726.1| |
score: 48.52 |
e-value: 2.4e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|37534848|ref|NP_921726.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|31432370|gb|AAP54... |
| Match: gi|30089754|gb|AAP20858.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|30089754|gb|AAP20858.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34915334|ref|NP_919124.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34915334|ref|NP_919124.1| putative polyprotein from transposon TNT 1-94 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345215|emb|CAD40198.2| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| OSJNBb0043H09.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|12328467|dbj|BAB21127.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|12328467|dbj|BAB21127.1| putative retrotransposon RIRE1 poly protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22535567|dbj|BAC10742.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|22535567|dbj|BAC10742.1| putative gag and pol [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914500|ref|NP_918597.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34914500|ref|NP_918597.1| putative retrovirus-related pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|34900652|ref|NP_911672.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34900652|ref|NP_911672.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|34903244|ref|NP_912969.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34903244|ref|NP_912969.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6539553|dbj|BAA88170... |
| Match: gi|34913798|ref|NP_918246.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34913798|ref|NP_918246.1| putative polyprotein from transposon TNT 1-94 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|34899536|ref|NP_911114.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34899536|ref|NP_911114.1| OJ1606_D04.14 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345087|emb|CAD40925.2| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38345087|emb|CAD40925.2| OSJNBa0033G16.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34915142|ref|NP_918918.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34915142|ref|NP_918918.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|37718811|gb|AAR01682.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|37718811|gb|AAR01682.1| putative gag and pol protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346534|emb|CAE04541.2| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346634|emb|CAD40744.2| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344281|emb|CAE03764.2| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38344281|emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|20502803|gb|AAM22635.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 42.37% |
Span: 174bp (45.3%) |
Frame: 1 |
| gi|20502803|gb|AAM22635.1| Gag and Pol [Zea mays] |
| Match: gi|24431600|gb|AAN61480.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] |
| Match: gi|28876012|gb|AAO60021.1| |
score: 48.14 |
e-value: 3.1e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|28876012|gb|AAO60021.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914670|ref|NP_918682.1| |
score: 47.75 |
e-value: 4.1e-05 |
Identity: 36.36% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34914670|ref|NP_918682.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|38346883|emb|CAE03908.2| |
score: 47.75 |
e-value: 4.1e-05 |
Identity: 36.36% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38346883|emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34908846|ref|NP_915770.1| |
score: 47.37 |
e-value: 5.3e-05 |
Identity: 44.64% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34908846|ref|NP_915770.1| putative retrotransposon polyprotein [Oryza sativa (japonica cultivar-group)] gi|2014627... |
| Match: gi|14719283|gb|AAK73108.1| |
score: 47.37 |
e-value: 5.3e-05 |
Identity: 40% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|14719283|gb|AAK73108.1| Fourf gag/pol protein [Zea mays] |
| Match: gi|38344764|emb|CAE01581.2| |
score: 46.98 |
e-value: 7e-05 |
Identity: 38.18% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38344764|emb|CAE01581.2| OSJNBa0068L06.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|29027729|dbj|BAC65862.1| |
score: 46.59 |
e-value: 9.1e-05 |
Identity: 41.07% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|29027729|dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37533036|ref|NP_920820.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|37533036|ref|NP_920820.1| putative retrovirus-related pol polyprotein from transposon Tnt 1-94 [Oryza sativa (japo... |
| Match: gi|38345450|emb|CAD41016.2| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|38345450|emb|CAD41016.2| OSJNBa0042L16.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903138|ref|NP_912916.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34903138|ref|NP_912916.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6630696|dbj|BAA88542... |
| Match: gi|37536112|ref|NP_922358.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|37536112|ref|NP_922358.1| putative retrotransposon polyprotein [Oryza sativa (japonica cultivar-group)] gi|1378646... |
| Match: gi|34897040|ref|NP_909866.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34897040|ref|NP_909866.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|20303592|gb|AAM19019.1|... |
| Match: gi|34901104|ref|NP_911898.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34901104|ref|NP_911898.1| contains ESTs D22114(C10364),AU081502(C10364)~putative retrovirus-related Pol polyprotei... |
| Match: gi|37534878|ref|NP_921741.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|37534878|ref|NP_921741.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|31432391|gb|AAP54028.1|... |
| Match: gi|34897548|ref|NP_910120.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34897548|ref|NP_910120.1| OSJNBa0042L16.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344706|emb|CAE05248.2| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|38344706|emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33113964|gb|AAP94586.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 41.82% |
Span: 165bp (43.0%) |
Frame: 1 |
| putative retrotransposon RIRE1 poly protein [Zea mays] |
| Match: gi|37530614|ref|NP_919609.1| |
score: 46.21 |
e-value: 0.00012 |
Identity: 42.86% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|37530614|ref|NP_919609.1| putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] gi|169... |
| Match: gi|38344081|emb|CAE01741.2| |
score: 45.82 |
e-value: 0.00016 |
Identity: 41.07% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|38344081|emb|CAE01741.2| OSJNBb0056F09.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345069|emb|CAD39986.2| |
score: 45.44 |
e-value: 0.0002 |
Identity: 36.36% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|38345069|emb|CAD39986.2| OSJNBb0045P24.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34906176|ref|NP_914435.1| |
score: 44.28 |
e-value: 0.00045 |
Identity: 36.36% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|34906176|ref|NP_914435.1| putative retrovirous-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (jap... |
| Match: gi|37534818|ref|NP_921711.1| |
score: 44.28 |
e-value: 0.00045 |
Identity: 36.36% |
Span: 165bp (43.0%) |
Frame: 1 |
| gi|37534818|ref|NP_921711.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|31432355|gb|AAP53998.1|... |
| Match: gi|37532384|ref|NP_920494.1| |
score: 43.51 |
e-value: 0.00077 |
Identity: 39.29% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|37532384|ref|NP_920494.1| putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] gi|198... |
| Match: gi|34901584|ref|NP_912138.1| |
score: 43.13 |
e-value: 0.001 |
Identity: 41.07% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34901584|ref|NP_912138.1| P0571D04.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535602|ref|NP_922103.1| |
score: 43.13 |
e-value: 0.001 |
Identity: 41.07% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|37535602|ref|NP_922103.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|10140704|gb|AAG... |
| Match: gi|22758275|gb|AAN05503.1| |
score: 38.89 |
e-value: 0.019 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|22758275|gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34901650|ref|NP_912171.1| |
score: 38.89 |
e-value: 0.019 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|34901650|ref|NP_912171.1| P0640E12.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344019|emb|CAE03125.2| |
score: 38.51 |
e-value: 0.025 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|38344019|emb|CAE03125.2| OJ000114_01.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536916|ref|NP_922760.1| |
score: 38.51 |
e-value: 0.025 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|37536916|ref|NP_922760.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|12597892|gb|AAG... |
| Match: gi|34898374|ref|NP_910533.1| |
score: 38.51 |
e-value: 0.025 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|34898374|ref|NP_910533.1| EST D24315(R1718) corresponds to a region of the predicted gene.~Similar to Tobacco DNA ... |
| Match: gi|38345684|emb|CAE04330.2| |
score: 38.51 |
e-value: 0.025 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|38345684|emb|CAE04330.2| OSJNBb0016D16.21 [Oryza sativa (japonica cultivar-group)] gi|38346705|emb|CAE04855.2| OSJ... |
| Match: gi|20502996|gb|AAM22705.1| |
score: 38.51 |
e-value: 0.025 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|20502996|gb|AAM22705.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21742944|emb|CAD39834.1| |
score: 38.51 |
e-value: 0.025 |
Identity: 38.89% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|21742944|emb|CAD39834.1| OSJNBa0079F16.1 [Oryza sativa (japonica cultivar-group)] gi|38347123|emb|CAE05100.2| OSJN... |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 38.12 |
e-value: 0.032 |
Identity: 38.78% |
Span: 147bp (38.3%) |
Frame: 1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|34913956|ref|NP_918325.1| |
score: 38.12 |
e-value: 0.032 |
Identity: 41.07% |
Span: 168bp (43.8%) |
Frame: 1 |
| gi|34913956|ref|NP_918325.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|20161698|dbj|BA... |
| Match: gi|32488892|emb|CAE03643.1| |
score: 36.58 |
e-value: 0.094 |
Identity: 34.88% |
Span: 129bp (33.6%) |
Frame: 1 |
| gi|32488892|emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903254|ref|NP_912974.1| |
score: 36.58 |
e-value: 0.094 |
Identity: 37.04% |
Span: 162bp (42.2%) |
Frame: 1 |
| gi|34903254|ref|NP_912974.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6539558|dbj|BAA88175... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 36.58 |
e-value: 0.094 |
Identity: 34.88% |
Span: 129bp (33.6%) |
Frame: 1 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
|
| arabidopsis/peptide [blastx] | Showing best 16 hits recorded |
| Match: At4g16870.1 |
score: 35.81 |
e-value: 0.004 |
Identity: 38.78% |
Span: 147bp (38.3%) |
Frame: 1 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At4g02960.1 |
score: 35.42 |
e-value: 0.006 |
Identity: 38.78% |
Span: 147bp (38.3%) |
Frame: 1 |
| At4g02960.1 68411.m00365 polyprotein of LTR transposon -related similar to A. thaliana polyprotein, GenBank accession... |
| Match: At1g56675.1 |
score: 35.04 |
e-value: 0.007 |
Identity: 36.96% |
Span: 138bp (35.9%) |
Frame: 1 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At2g15650.1 |
score: 34.65 |
e-value: 0.009 |
Identity: 42.22% |
Span: 135bp (35.2%) |
Frame: 1 |
| At2g15650.1 68409.m01606 retroelement pol polyprotein -related |
| Match: At2g04820.1 |
score: 33.88 |
e-value: 0.016 |
Identity: 36.73% |
Span: 147bp (38.3%) |
Frame: 1 |
| At2g04820.1 68409.m00443 retroelement pol polyprotein -related |
| Match: At1g27285.1 |
score: 33.5 |
e-value: 0.021 |
Identity: 34.69% |
Span: 147bp (38.3%) |
Frame: 1 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At3g25450.1 |
score: 33.5 |
e-value: 0.021 |
Identity: 33.33% |
Span: 171bp (44.5%) |
Frame: 1 |
| At3g25450.1 68410.m02895 hypothetical protein contains similarity to retrovirus-related pol polyprotein from transpos... |
| Match: At1g44510.1 |
score: 33.11 |
e-value: 0.027 |
Identity: 36.73% |
Span: 147bp (38.3%) |
Frame: 1 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At1g59265.1 |
score: 32.73 |
e-value: 0.036 |
Identity: 34.69% |
Span: 147bp (38.3%) |
Frame: 1 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g58889.1 |
score: 32.73 |
e-value: 0.036 |
Identity: 34.69% |
Span: 147bp (38.3%) |
Frame: 1 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At2g07010.1 |
score: 32.73 |
e-value: 0.036 |
Identity: 31.82% |
Span: 132bp (34.4%) |
Frame: 1 |
| At2g07010.1 68409.m00716 retroelement pol polyprotein -related |
| Match: At2g05960.1 |
score: 32.73 |
e-value: 0.036 |
Identity: 34.78% |
Span: 138bp (35.9%) |
Frame: 1 |
| At2g05960.1 68409.m00578 retroelement pol polyprotein -related |
| Match: At1g60020.1 |
score: 32.34 |
e-value: 0.047 |
Identity: 32.65% |
Span: 147bp (38.3%) |
Frame: 1 |
| At1g60020.1 68408.m06198 polyprotein -related similar to polyprotein GI:2865437 from [Arabidopsis arenosa] |
| Match: At1g32590.1 |
score: 32.34 |
e-value: 0.047 |
Identity: 32.08% |
Span: 159bp (41.4%) |
Frame: 1 |
| At1g32590.1 68408.m03642 copia-type polyprotein -related similar to GI:6850900 from [Arabidopsis thaliana] |
| Match: At4g07840.1 |
score: 32.34 |
e-value: 0.047 |
Identity: 29.09% |
Span: 165bp (43.0%) |
Frame: 1 |
| At4g07840.1 68411.m01115 transposon protein -related |
| Match: At1g33817.1 |
score: 31.96 |
e-value: 0.061 |
Identity: 36.96% |
Span: 138bp (35.9%) |
Frame: 1 |
| At1g33817.1 68408.m03793 hypothetical protein similar C-term of gag-pol polyprotein GB:AAC64917 (Glycine max); contai... |
|
