| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|51989474|gb|AAU21243.1| |
score: 146 |
e-value: 9e-34 |
Identity: 96% |
Span: 225bp (55.7%) |
Frame: -1 |
| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] |
| Match: gi|224133496|ref|XP_002321582.1| |
score: 131 |
e-value: 2e-29 |
Identity: 86.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222868578|gb|EEF05709.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|255540733|ref|XP_002511431.1| |
score: 131 |
e-value: 3e-29 |
Identity: 85.14% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA-dependent RNA polymerase, putative [Ricinus communis] >gi223550546|gb|EEF52033.1| RNA-dependent RNA polymerase, p... |
| Match: gi|225457089|ref|XP_002280099.1| |
score: 131 |
e-value: 3e-29 |
Identity: 84% |
Span: 225bp (55.7%) |
Frame: -1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270226328|emb|CBI15062.1| unnamed protein product [Vitis vinifera] |
| Match: gi|15237051|ref|NP_192851.1| |
score: 121 |
e-value: 3e-26 |
Identity: 77.33% |
Span: 225bp (55.7%) |
Frame: -1 |
| RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase [Arabidopsis thaliana] >gi3600048|gb|AAC35535.1| s... |
| Match: gi|222629015|gb|EEE61147.1| |
score: 120 |
e-value: 7e-26 |
Identity: 78.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| hypothetical protein OsJ_15104 [Oryza sativa Japonica Group] |
| Match: gi|125548642|gb|EAY94464.1| |
score: 120 |
e-value: 7e-26 |
Identity: 78.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| hypothetical protein OsI_16234 [Oryza sativa Indica Group] |
| Match: gi|115458854|ref|NP_001053027.1| |
score: 120 |
e-value: 7e-26 |
Identity: 78.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| Os04g0465700 [Oryza sativa (japonica cultivar-group)] >gi113564598|dbj|BAF14941.1| Os04g0465700 [Oryza sativa Japonic... |
| Match: gi|75327281|sp|Q7XM31.1|RDR2_ORYSJ |
score: 120 |
e-value: 7e-26 |
Identity: 78.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| RecName: Full=Probable RNA-dependent RNA polymerase 2; Short=OsRDR2 >gi32492169|emb|CAE04828.1| OSJNBb0048E02.13 [Ory... |
| Match: gi|238015130|gb|ACR38600.1| |
score: 114 |
e-value: 3e-24 |
Identity: 74.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| unknown [Zea mays] |
| Match: gi|89473792|gb|ABD72708.1| |
score: 114 |
e-value: 3e-24 |
Identity: 74.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| RNA-dependent RNA polymerase [Zea mays] |
| Match: gi|242073398|ref|XP_002446635.1| |
score: 111 |
e-value: 2e-23 |
Identity: 73.33% |
Span: 225bp (55.7%) |
Frame: -1 |
| hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor] >gi241937818|gb|EES10963.1| hypothetical protein SORBIDRA... |
| Match: gi|242053113|ref|XP_002455702.1| |
score: 99.4 |
e-value: 1e-19 |
Identity: 66.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| hypothetical protein SORBIDRAFT_03g022060 [Sorghum bicolor] >gi241927677|gb|EES00822.1| hypothetical protein SORBIDRA... |
| Match: gi|224111420|ref|XP_002315849.1| |
score: 93.6 |
e-value: 7e-18 |
Identity: 55.41% |
Span: 222bp (55.0%) |
Frame: -1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222864889|gb|EEF02020.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|146762448|gb|ABQ45352.1| |
score: 91.7 |
e-value: 3e-17 |
Identity: 56.16% |
Span: 219bp (54.2%) |
Frame: -1 |
| RNA-dependent RNA polymerase [Gossypium hirsutum] |
| Match: gi|4138282|emb|CAA09697.1| |
score: 91.7 |
e-value: 3e-17 |
Identity: 55.41% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA-directed RNA polymerase [Nicotiana tabacum] |
| Match: gi|157152684|gb|ABV24845.1| |
score: 91.3 |
e-value: 3e-17 |
Identity: 54.05% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA-dependent RNA polymerase [Nicotiana glutinosa] >gi209420668|gb|ACI46982.1| RNA-dependent RNA polymerase [Nicotian... |
| Match: gi|4138343|emb|CAA09896.1| |
score: 90.5 |
e-value: 6e-17 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA-directed RNA polymerase [Petunia x hybrida] |
| Match: gi|113205257|gb|AAT38687.2| |
score: 89.7 |
e-value: 1e-16 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA-directed RNA polymerase, putative [Solanum demissum] |
| Match: gi|4038592|emb|CAA71421.1| |
score: 89.7 |
e-value: 1e-16 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA-directed RNA polymerase [Solanum lycopersicum] |
| Match: gi|90823307|gb|ABE01124.1| |
score: 89 |
e-value: 2e-16 |
Identity: 54.79% |
Span: 219bp (54.2%) |
Frame: -1 |
| RNA-dependent RNA polymerase [Gossypium hirsutum] |
| Match: gi|142942402|gb|ABO92977.1| |
score: 89 |
e-value: 2e-16 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| putative RNA-dependent RNA-polymerase [Solanum tuberosum] |
| Match: gi|113205271|gb|AAT38699.2| |
score: 89 |
e-value: 2e-16 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA dependent RNA polymerase family protein [Solanum demissum] |
| Match: gi|113205254|gb|ABI34311.1| |
score: 89 |
e-value: 2e-16 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| RNA dependent RNA polymerase family protein [Solanum demissum] |
| Match: gi|224099569|ref|XP_002311535.1| |
score: 87.8 |
e-value: 4e-16 |
Identity: 52.7% |
Span: 222bp (55.0%) |
Frame: -1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222851355|gb|EEE88902.1| rna-dependent RNA polymerase [Populus ... |
|
| 38 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At4G11130.1 |
score: 121 |
e-value: 2e-28 |
Identity: 77.33% |
Span: 225bp (55.7%) |
Frame: -1 |
| Symbols: RDR2 | RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase | chr4:6780518-6784386 FORWARD |
| Match: At1G14790.1 |
score: 81.6 |
e-value: 1e-16 |
Identity: 49.32% |
Span: 219bp (54.2%) |
Frame: -1 |
| Symbols: ATRDRP1, RDR1 | RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding | ... |
|
| swissprot [blastx] | Showing best 3 hits recorded |
| Match: Q7XM31 |
score: 120 |
e-value: 3e-27 |
Identity: 78.67% |
Span: 225bp (55.7%) |
Frame: -1 |
| Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1 |
| Match: Q0DXS3 |
score: 77.4 |
e-value: 3e-14 |
Identity: 49.28% |
Span: 207bp (51.2%) |
Frame: -1 |
| Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2 |
| Match: Q8LHH9 |
score: 66.6 |
e-value: 4e-11 |
Identity: 47.3% |
Span: 222bp (55.0%) |
Frame: -1 |
| Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1 |
|
