| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255544928|ref|XP_002513525.1| |
score: 209 |
e-value: 1e-52 |
Identity: 75.91% |
Span: 408bp (99.8%) |
Frame: 3 |
| nucleic acid binding protein, putative [Ricinus communis] >gi223547433|gb|EEF48928.1| nucleic acid binding protein, p... |
| Match: gi|270228374|emb|CBI17184.1| |
score: 206 |
e-value: 5e-52 |
Identity: 74.47% |
Span: 399bp (97.6%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225436555|ref|XP_002274487.1| |
score: 206 |
e-value: 5e-52 |
Identity: 74.47% |
Span: 399bp (97.6%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224104191|ref|XP_002313352.1| |
score: 206 |
e-value: 9e-52 |
Identity: 74.26% |
Span: 408bp (99.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa] |
| Match: gi|147807899|emb|CAN62156.1| |
score: 206 |
e-value: 9e-52 |
Identity: 73.43% |
Span: 399bp (97.6%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|270241393|emb|CBI28616.1| |
score: 201 |
e-value: 2e-50 |
Identity: 71.22% |
Span: 405bp (99.0%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225449941|ref|XP_002270421.1| |
score: 201 |
e-value: 2e-50 |
Identity: 71.22% |
Span: 405bp (99.0%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147770113|emb|CAN69883.1| |
score: 201 |
e-value: 2e-50 |
Identity: 71.22% |
Span: 405bp (99.0%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|224072821|ref|XP_002303898.1| |
score: 197 |
e-value: 4e-49 |
Identity: 68.84% |
Span: 405bp (99.0%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222841330|gb|EEE78877.1| predicted protein [Populus trichocarpa] |
| Match: gi|38230504|gb|AAR14273.1| |
score: 192 |
e-value: 8e-48 |
Identity: 68.12% |
Span: 405bp (99.0%) |
Frame: 3 |
| predicted protein [Populus tremula x Populus alba] |
| Match: gi|255544930|ref|XP_002513526.1| |
score: 191 |
e-value: 2e-47 |
Identity: 68.35% |
Span: 399bp (97.6%) |
Frame: 3 |
| nucleic acid binding protein, putative [Ricinus communis] >gi223547434|gb|EEF48929.1| nucleic acid binding protein, p... |
| Match: gi|224054502|ref|XP_002298292.1| |
score: 184 |
e-value: 3e-45 |
Identity: 74.38% |
Span: 363bp (88.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa] |
| Match: gi|224114163|ref|XP_002332416.1| |
score: 174 |
e-value: 2e-42 |
Identity: 70.94% |
Span: 348bp (85.1%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222832369|gb|EEE70846.1| predicted protein [Populus trichocarpa] |
| Match: gi|224054504|ref|XP_002298293.1| |
score: 172 |
e-value: 9e-42 |
Identity: 63.12% |
Span: 408bp (99.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222845551|gb|EEE83098.1| predicted protein [Populus trichocarpa] |
| Match: gi|14586374|emb|CAC42905.1| |
score: 171 |
e-value: 3e-41 |
Identity: 61.7% |
Span: 402bp (98.3%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|229621704|sp|Q94CJ8.2|C3H55_ARATH |
score: 171 |
e-value: 3e-41 |
Identity: 61.7% |
Span: 402bp (98.3%) |
Frame: 3 |
| RecName: Full=Zinc finger CCCH domain-containing protein 55; Short=AtC3H55 |
| Match: gi|240256278|ref|NP_568277.5| |
score: 171 |
e-value: 3e-41 |
Identity: 61.7% |
Span: 402bp (98.3%) |
Frame: 3 |
| nucleic acid binding / nucleotide binding / zinc ion binding [Arabidopsis thaliana] >gi26453236|dbj|BAC43691.1| unkno... |
| Match: gi|222637701|gb|EEE67833.1| |
score: 164 |
e-value: 3e-39 |
Identity: 62.96% |
Span: 381bp (93.2%) |
Frame: 3 |
| hypothetical protein OsJ_25610 [Oryza sativa Japonica Group] |
| Match: gi|125559631|gb|EAZ05167.1| |
score: 164 |
e-value: 3e-39 |
Identity: 62.96% |
Span: 381bp (93.2%) |
Frame: 3 |
| hypothetical protein OsI_27364 [Oryza sativa Indica Group] |
| Match: gi|33146675|dbj|BAC80021.1| |
score: 164 |
e-value: 3e-39 |
Identity: 62.96% |
Span: 381bp (93.2%) |
Frame: 3 |
| putative DAZ associated protein 1 [Oryza sativa Japonica Group] |
| Match: gi|115474123|ref|NP_001060660.1| |
score: 163 |
e-value: 5e-39 |
Identity: 62.22% |
Span: 381bp (93.2%) |
Frame: 3 |
| Os07g0682400 [Oryza sativa (japonica cultivar-group)] >gi122166929|sp|Q0D3J9.1|C3H53_ORYSJ RecName: Full=Zinc finger ... |
| Match: gi|240255377|ref|NP_188747.5| |
score: 162 |
e-value: 1e-38 |
Identity: 63.78% |
Span: 381bp (93.2%) |
Frame: 3 |
| RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|79313317|ref|NP_001030738.1| |
score: 162 |
e-value: 1e-38 |
Identity: 63.78% |
Span: 381bp (93.2%) |
Frame: 3 |
| RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|11994270|dbj|BAB01453.1| |
score: 162 |
e-value: 1e-38 |
Identity: 63.78% |
Span: 381bp (93.2%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|115452803|ref|NP_001050002.1| |
score: 156 |
e-value: 6e-37 |
Identity: 60.74% |
Span: 381bp (93.2%) |
Frame: 3 |
| Os03g0328900 [Oryza sativa (japonica cultivar-group)] >gi108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H type f... |
|
| 48 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At5G12440.1 |
score: 171 |
e-value: 2e-43 |
Identity: 61.7% |
Span: 402bp (98.3%) |
Frame: 3 |
| zinc finger (CCCH-type) family protein | chr5:4035892-4038311 REVERSE |
| Match: At3G21100.2 |
score: 162 |
e-value: 6e-41 |
Identity: 63.78% |
Span: 381bp (93.2%) |
Frame: 3 |
| RNA binding | chr3:7399168-7401876 FORWARD |
| Match: At3G21100.1 |
score: 162 |
e-value: 6e-41 |
Identity: 63.78% |
Span: 381bp (93.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:7399168-7401876 FORWARD |
| Match: At3G51950.2 |
score: 141 |
e-value: 1e-34 |
Identity: 59.12% |
Span: 399bp (97.6%) |
Frame: 3 |
| RNA binding | chr3:19289222-19291385 REVERSE |
| Match: At3G51950.1 |
score: 141 |
e-value: 1e-34 |
Identity: 59.12% |
Span: 399bp (97.6%) |
Frame: 3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19289222-19291385 REV... |
| Match: At1G51520.1 |
score: 135 |
e-value: 6e-33 |
Identity: 60.33% |
Span: 360bp (88.0%) |
Frame: 3 |
| nucleic acid binding / nucleotide binding | chr1:19110457-19112201 FORWARD |
| Match: At1G51520.2 |
score: 134 |
e-value: 1e-32 |
Identity: 62.07% |
Span: 345bp (84.4%) |
Frame: 3 |
| nucleic acid binding | chr1:19110457-19112761 FORWARD |
| Match: At3G63450.2 |
score: 128 |
e-value: 1e-30 |
Identity: 56.92% |
Span: 384bp (93.9%) |
Frame: 3 |
| RNA binding | chr3:23438166-23439839 REVERSE |
| Match: At3G63450.1 |
score: 128 |
e-value: 1e-30 |
Identity: 56.92% |
Span: 384bp (93.9%) |
Frame: 3 |
| RNA binding | chr3:23438166-23439839 REVERSE |
| Match: At2G05160.1 |
score: 84.3 |
e-value: 2e-17 |
Identity: 74.51% |
Span: 153bp (37.4%) |
Frame: 3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr2:1859008-1860928 REVERSE |
|
| swissprot [blastx] | Showing best 8 hits recorded |
| Match: Q94CJ8 |
score: 171 |
e-value: 2e-42 |
Identity: 61.7% |
Span: 402bp (98.3%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana GN=At5g12440 PE=2 SV=2 |
| Match: Q0D3J9 |
score: 163 |
e-value: 3e-40 |
Identity: 62.22% |
Span: 381bp (93.2%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica GN=Os07g0682400 PE=2 SV=1 |
| Match: Q10M00 |
score: 156 |
e-value: 3e-38 |
Identity: 60.74% |
Span: 381bp (93.2%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 PE=2 SV=2 |
| Match: Q10LZ9 |
score: 151 |
e-value: 1e-36 |
Identity: 60.74% |
Span: 381bp (93.2%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica GN=Os03g0329200 PE=2 SV=1 |
| Match: Q9SV09 |
score: 141 |
e-value: 1e-33 |
Identity: 59.12% |
Span: 399bp (97.6%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana GN=At3g51950 PE=1 SV=1 |
| Match: Q9SJ41 |
score: 84.3 |
e-value: 2e-16 |
Identity: 74.51% |
Span: 153bp (37.4%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana GN=At2g05160 PE=2 SV=1 |
| Match: Q6ZK57 |
score: 79.7 |
e-value: 5e-15 |
Identity: 65.45% |
Span: 165bp (40.3%) |
Frame: 3 |
| Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica GN=Os08g0126700 PE=2 SV=2 |
| Match: Q84ZT0 |
score: 76.6 |
e-value: 4e-14 |
Identity: 68% |
Span: 150bp (36.7%) |
Frame: 3 |
| Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica GN=Os07g0583300 PE=4 SV=1 |
|