All Stored BLAST annotations for SGN-U566372
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|11134656|sp|Q42877|RPB2_SOLLC score: 2303 e-value: 0 Identity: 99.92% Span: 3531bp (86.1%) Frame: 2
DNA-directed
Match: gi|68300812|gb|AAY89347.1| score: 2246 e-value: 0 Identity: 97.38% Span: 3525bp (85.9%) Frame: 2
RNA polymerase II second largest subunit [Petunia x hybrida]
Match: gi|70794966|gb|AAZ08457.1| score: 2232 e-value: 0 Identity: 96.26% Span: 3531bp (86.1%) Frame: 2
RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Match: gi|68300814|gb|AAY89348.1| score: 2208 e-value: 0 Identity: 94.6% Span: 3531bp (86.1%) Frame: 2
RNA polymerase II second largest subunit [Antirrhinum majus]
Match: gi|147841183|emb|CAN72948.1| score: 2198 e-value: 0 Identity: 94.64% Span: 3522bp (85.9%) Frame: 2
hypothetical
Match: gi|15234572|ref|NP_193902.1| score: 2189 e-value: 0 Identity: 94.72% Span: 3522bp (85.9%) Frame: 2
NRPB2; DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21542437|sp|P38420.2|RPB2_ARATH RecName: F...
Match: gi|16486|emb|CAA79528.1| score: 2183 e-value: 0 Identity: 94.55% Span: 3522bp (85.9%) Frame: 2
RNA polymerase II second largest subunit [Arabidopsis thaliana]
Match: gi|16488|emb|CAA79527.1| score: 2180 e-value: 0 Identity: 94.46% Span: 3522bp (85.9%) Frame: 2
RNA polymerase II second largest subunit [Arabidopsis thaliana]
Match: gi|157344351|emb|CAO69734.1| score: 2179 e-value: 0 Identity: 92.52% Span: 3522bp (85.9%) Frame: 2
unnamed
Match: gi|108710089|gb|ABF97884.1| score: 2136 e-value: 0 Identity: 93.12% Span: 3486bp (85.0%) Frame: 2
DNA-directed RNA polymerase II 135 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1...
Match: gi|70794968|gb|AAZ08458.1| score: 2098 e-value: 0 Identity: 89.26% Span: 3522bp (85.9%) Frame: 2
RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Match: gi|68300804|gb|AAY89344.1| score: 2091 e-value: 0 Identity: 90.03% Span: 3519bp (85.8%) Frame: 2
RNA polymerase II second largest subunit [Petunia x hybrida]
Match: gi|68300799|gb|AAY89342.1| score: 2081 e-value: 0 Identity: 89.94% Span: 3519bp (85.8%) Frame: 2
RNA polymerase II second largest subunit [Nicotiana sylvestris]
Match: gi|68300810|gb|AAY89346.1| score: 2081 e-value: 0 Identity: 98.7% Span: 3240bp (79.0%) Frame: 2
RNA polymerase II second largest subunit [Nicotiana sylvestris]
Match: gi|125587272|gb|EAZ27936.1| score: 2061 e-value: 0 Identity: 92.88% Span: 3372bp (82.2%) Frame: 2
hypothetical
Match: gi|168027816|ref|XP_001766425.1| score: 2060 e-value: 0 Identity: 89.18% Span: 3492bp (85.1%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162682334|gb|EDQ68753.1| predicted protein [Physcomitrella...
Match: gi|68300807|gb|AAY89345.1| score: 2058 e-value: 0 Identity: 88.33% Span: 3531bp (86.1%) Frame: 2
RNA polymerase II second largest subunit [Solanum lycopersicum]
Match: gi|68300802|gb|AAY89343.1| score: 2045 e-value: 0 Identity: 88.14% Span: 3492bp (85.1%) Frame: 2
RNA polymerase II second largest subunit [Antirrhinum majus]
Match: gi|70794970|gb|AAZ08459.1| score: 1778 e-value: 0 Identity: 95.48% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|68131844|gb|AAY85200.1| score: 1777 e-value: 0 Identity: 96.01% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|68131834|gb|AAY85195.1| score: 1774 e-value: 0 Identity: 95.9% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|68131914|gb|AAY85235.1| score: 1772 e-value: 0 Identity: 94.85% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|68131916|gb|AAY85236.1| score: 1769 e-value: 0 Identity: 94.64% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|70794972|gb|AAZ08460.1| score: 1763 e-value: 0 Identity: 94.11% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|68131842|gb|AAY85199.1| score: 1746 e-value: 0 Identity: 93.48% Span: 2853bp (69.6%) Frame: 2
RNA
Match: gi|70794974|gb|AAZ08461.1| score: 1742 e-value: 0 Identity: 94.38% Span: 2829bp (69.0%) Frame: 2
RNA
Match: gi|70794976|gb|AAZ08462.1| score: 1707 e-value: 0 Identity: 94.26% Span: 2769bp (67.5%) Frame: 2
RNA
Match: gi|145340678|ref|XP_001415447.1| score: 1673 e-value: 0 Identity: 72.76% Span: 3492bp (85.1%) Frame: 2
predicted
Match: gi|68131836|gb|AAY85196.1| score: 1659 e-value: 0 Identity: 93.5% Span: 2721bp (66.3%) Frame: 2
RNA
Match: gi|68300794|gb|AAY89340.1| score: 1615 e-value: 0 Identity: 94.85% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|68131824|gb|AAY85190.1| score: 1615 e-value: 0 Identity: 95.07% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|68131876|gb|AAY85216.1| score: 1610 e-value: 0 Identity: 94.27% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|66806179|ref|XP_636812.1| score: 1607 e-value: 0 Identity: 69.83% Span: 3492bp (85.1%) Frame: 2
gi|66806179|ref|XP_636812.1| RNA polymerase II core subunit [Dictyostelium discoideum] >gi|60465215|gb|EAL63310.1| RN...
Match: gi|68131850|gb|AAY85203.1| score: 1607 e-value: 0 Identity: 94.16% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|68131860|gb|AAY85208.1| score: 1604 e-value: 0 Identity: 94.05% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|68131878|gb|AAY85217.1| score: 1598 e-value: 0 Identity: 93.94% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|68131852|gb|AAY85204.1| score: 1597 e-value: 0 Identity: 94.04% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|68131890|gb|AAY85223.1| score: 1596 e-value: 0 Identity: 94.68% Span: 2595bp (63.3%) Frame: 2
RNA
Match: gi|68300792|gb|AAY89339.1| score: 1594 e-value: 0 Identity: 92.9% Span: 2619bp (63.8%) Frame: 2
RNA
Match: gi|219458224|ref|XP_002226834.1| score: 1538 e-value: 0 Identity: 67.06% Span: 3528bp (86.0%) Frame: 2
hypothetical
Match: gi|198418494|ref|XP_002128916.1| score: 1534 e-value: 0 Identity: 66.89% Span: 3522bp (85.9%) Frame: 2
PREDICTED:
Match: gi|73975079|ref|XP_861018.1| score: 1524 e-value: 0 Identity: 67.09% Span: 3504bp (85.4%) Frame: 2
gi|73975079|ref|XP_861018.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|156538773|ref|XP_001607902.1| score: 1524 e-value: 0 Identity: 66.61% Span: 3507bp (85.5%) Frame: 2
PREDICTED:
Match: gi|73975077|ref|XP_860990.1| score: 1523 e-value: 0 Identity: 66.81% Span: 3504bp (85.4%) Frame: 2
gi|73975077|ref|XP_860990.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|154707850|ref|NP_001092552.1| score: 1523 e-value: 0 Identity: 66.53% Span: 3504bp (85.4%) Frame: 2
DNA
Match: gi|73975073|ref|XP_860930.1| score: 1521 e-value: 0 Identity: 66.24% Span: 3504bp (85.4%) Frame: 2
gi|73975073|ref|XP_860930.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|73975069|ref|XP_860865.1| score: 1521 e-value: 0 Identity: 66.75% Span: 3504bp (85.4%) Frame: 2
gi|73975069|ref|XP_860865.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|73975075|ref|XP_860963.1| score: 1521 e-value: 0 Identity: 66.47% Span: 3504bp (85.4%) Frame: 2
gi|73975075|ref|XP_860963.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|194379208|dbj|BAG58155.1| score: 1521 e-value: 0 Identity: 66.44% Span: 3504bp (85.4%) Frame: 2
unnamed
Match: gi|194209129|ref|XP_001916826.1| score: 1521 e-value: 0 Identity: 66.53% Span: 3504bp (85.4%) Frame: 2
PREDICTED:
Match: gi|126331583|ref|XP_001362455.1| score: 1521 e-value: 0 Identity: 66.53% Span: 3504bp (85.4%) Frame: 2
PREDICTED:
Match: gi|73975071|ref|XP_860899.1| score: 1521 e-value: 0 Identity: 66.95% Span: 3504bp (85.4%) Frame: 2
gi|73975071|ref|XP_860899.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|4505941|ref|NP_000929.1| score: 1520 e-value: 0 Identity: 66.44% Span: 3504bp (85.4%) Frame: 2
gi|4505941|ref|NP_000929.1| DNA directed RNA polymerase II polypeptide B; polymerase (RNA) II (DNA directed) polypept...
Match: gi|109074756|ref|XP_001083325.1| score: 1520 e-value: 0 Identity: 66.44% Span: 3504bp (85.4%) Frame: 2
PREDICTED:
Match: gi|51702009|sp|Q8CFI7|RPB2_MOUSE score: 1519 e-value: 0 Identity: 66.36% Span: 3504bp (85.4%) Frame: 2
gi|51702009|sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RP...
Match: gi|24418911|ref|NP_722493.1| score: 1519 e-value: 0 Identity: 66.36% Span: 3504bp (85.4%) Frame: 2
gi|24418911|ref|NP_722493.1| polymerase (RNA) II (DNA directed) polypeptide B [Mus musculus] gi|23512288|gb|AAH38472....
Match: gi|57530101|ref|NP_001006448.1| score: 1516 e-value: 0 Identity: 66.27% Span: 3504bp (85.4%) Frame: 2
polymerase
Match: gi|73975065|ref|XP_860805.1| score: 1516 e-value: 0 Identity: 66.25% Span: 3504bp (85.4%) Frame: 2
gi|73975065|ref|XP_860805.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|73975067|ref|XP_860838.1| score: 1514 e-value: 0 Identity: 66.18% Span: 3504bp (85.4%) Frame: 2
gi|73975067|ref|XP_860838.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|156372267|ref|XP_001628960.1| score: 1513 e-value: 0 Identity: 66.18% Span: 3489bp (85.1%) Frame: 2
predicted
Match: gi|91090964|ref|XP_974653.1| score: 1512 e-value: 0 Identity: 65.88% Span: 3522bp (85.9%) Frame: 2
PREDICTED:
Match: gi|73975059|ref|XP_860708.1| score: 1506 e-value: 0 Identity: 66.3% Span: 3504bp (85.4%) Frame: 2
gi|73975059|ref|XP_860708.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|212509368|gb|EEB12775.1| score: 1505 e-value: 0 Identity: 65.34% Span: 3519bp (85.8%) Frame: 2
DNA-directed
Match: gi|158291888|ref|XP_313416.3| score: 1504 e-value: 0 Identity: 65.71% Span: 3531bp (86.1%) Frame: 2
AGAP003648-PA
Match: gi|170042980|ref|XP_001849183.1| score: 1503 e-value: 0 Identity: 65.6% Span: 3519bp (85.8%) Frame: 2
DNA-directed
Match: gi|70906409|gb|AAZ14928.1| score: 1497 e-value: 0 Identity: 63.97% Span: 3510bp (85.6%) Frame: 2
DNA-dependent
Match: gi|194745991|ref|XP_001955468.1| score: 1497 e-value: 0 Identity: 64.97% Span: 3525bp (85.9%) Frame: 2
GF16238
Match: gi|195446199|ref|XP_002070673.1| score: 1495 e-value: 0 Identity: 64.97% Span: 3525bp (85.9%) Frame: 2
GK12191
Match: gi|195145272|ref|XP_002013620.1| score: 1495 e-value: 0 Identity: 64.97% Span: 3525bp (85.9%) Frame: 2
GL24239
Match: gi|195109863|ref|XP_001999501.1| score: 1494 e-value: 0 Identity: 64.97% Span: 3525bp (85.9%) Frame: 2
GI23040
Match: gi|17136444|ref|NP_476706.1| score: 1493 e-value: 0 Identity: 64.89% Span: 3525bp (85.9%) Frame: 2
gi|17136444|ref|NP_476706.1| RNA polymerase II 140kD subunit CG3180-PA [Drosophila melanogaster] gi|12644108|sp|P0826...
Match: gi|73975063|ref|XP_860777.1| score: 1493 e-value: 0 Identity: 65.85% Span: 3504bp (85.4%) Frame: 2
gi|73975063|ref|XP_860777.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|194900689|ref|XP_001979888.1| score: 1493 e-value: 0 Identity: 64.89% Span: 3525bp (85.9%) Frame: 2
GG16840
Match: gi|195501705|ref|XP_002097907.1| score: 1493 e-value: 0 Identity: 64.89% Span: 3525bp (85.9%) Frame: 2
GE24221
Match: gi|195392246|ref|XP_002054770.1| score: 1493 e-value: 0 Identity: 65% Span: 3519bp (85.8%) Frame: 2
RNA
Match: gi|195064711|ref|XP_001996619.1| score: 1491 e-value: 0 Identity: 65% Span: 3519bp (85.8%) Frame: 2
GH19704
Match: gi|195570991|ref|XP_002103487.1| score: 1490 e-value: 0 Identity: 64.81% Span: 3525bp (85.9%) Frame: 2
GD18948
Match: gi|169844839|ref|XP_001829140.1| score: 1486 e-value: 0 Identity: 63% Span: 3522bp (85.9%) Frame: 2
hypothetical
Match: gi|213408763|ref|XP_002175152.1| score: 1481 e-value: 0 Identity: 63.06% Span: 3504bp (85.4%) Frame: 2
DNA-directed
Match: gi|219116262|ref|XP_002178926.1| score: 1473 e-value: 0 Identity: 63.2% Span: 3516bp (85.7%) Frame: 2
predicted
Match: gi|215510947|gb|EEC20400.1| score: 1471 e-value: 0 Identity: 64.89% Span: 3510bp (85.6%) Frame: 2
DNA-directed
Match: gi|63054498|ref|NP_593101.2| score: 1469 e-value: 0 Identity: 62.98% Span: 3504bp (85.4%) Frame: 2
gi|63054498|ref|NP_593101.2| hypothetical protein SPAC23G3.01 [Schizosaccharomyces pombe 972h-] >gi|19862286|sp|Q0206...
Match: gi|218554|dbj|BAA02600.1| score: 1468 e-value: 0 Identity: 62.98% Span: 3504bp (85.4%) Frame: 2
gi|218554|dbj|BAA02600.1| RNA polymerase II second largest subunit [Schizosaccharomyces pombe]
Match: gi|47208444|emb|CAF93098.1| score: 1465 e-value: 0 Identity: 62.61% Span: 3444bp (84.0%) Frame: 2
gi|47208444|emb|CAF93098.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|196009726|ref|XP_002114728.1| score: 1464 e-value: 0 Identity: 63.3% Span: 3531bp (86.1%) Frame: 2
DNA
Match: gi|17552304|ref|NP_498047.1| score: 1459 e-value: 0 Identity: 63.58% Span: 3522bp (85.9%) Frame: 2
gi|17552304|ref|NP_498047.1| RNA polymerase II subunit (3G33) [Caenorhabditis elegans] gi|2507348|sp|Q10578|RPB2_CAEE...
Match: gi|164660997|ref|XP_001731621.1| score: 1457 e-value: 0 Identity: 62.33% Span: 3486bp (85.0%) Frame: 2
hypothetical
Match: gi|170591608|ref|XP_001900562.1| score: 1456 e-value: 0 Identity: 62.94% Span: 3519bp (85.8%) Frame: 2
DNA-directed
Match: gi|157775493|ref|XP_001665812.1| score: 1456 e-value: 0 Identity: 63.85% Span: 3519bp (85.8%) Frame: 2
hypothetical
Match: gi|73975081|ref|XP_861044.1| score: 1453 e-value: 0 Identity: 67.64% Span: 3279bp (79.9%) Frame: 2
gi|73975081|ref|XP_861044.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase...
Match: gi|189528264|ref|XP_001920494.1| score: 1452 e-value: 0 Identity: 63.91% Span: 3522bp (85.9%) Frame: 2
PREDICTED:
Match: gi|114594588|ref|XP_001136218.1| score: 1451 e-value: 0 Identity: 67.55% Span: 3279bp (79.9%) Frame: 2
PREDICTED:
Match: gi|194378878|dbj|BAG57990.1| score: 1448 e-value: 0 Identity: 67.45% Span: 3279bp (79.9%) Frame: 2
unnamed
Match: gi|150951109|ref|XP_001387366.2| score: 1445 e-value: 0 Identity: 61.24% Span: 3525bp (85.9%) Frame: 2
DNA-dependent
Match: gi|116000401|emb|CAL50081.1| score: 1439 e-value: 0 Identity: 72.07% Span: 3054bp (74.5%) Frame: 2
DNA-directed
Match: gi|50549809|ref|XP_502376.1| score: 1438 e-value: 0 Identity: 61.7% Span: 3516bp (85.7%) Frame: 2
gi|50549809|ref|XP_502376.1| hypothetical protein [Yarrowia lipolytica] >gi|49648244|emb|CAG80564.1| unnamed protein ...
Match: gi|5514652|emb|CAA29180.2| score: 1433 e-value: 0 Identity: 64.99% Span: 3372bp (82.2%) Frame: 2
gi|5514652|emb|CAA29180.2| RNA polymerase [Drosophila melanogaster]
Match: gi|68475107|ref|XP_718439.1| score: 1431 e-value: 0 Identity: 60.49% Span: 3531bp (86.1%) Frame: 2
gi|68475107|ref|XP_718439.1| DNA-dependent RNA polymerase II [Candida albicans SC5314] >gi|68475648|ref|XP_718172.1| ...
Match: gi|6324725|ref|NP_014794.1| score: 1427 e-value: 0 Identity: 61.3% Span: 3510bp (85.6%) Frame: 2
gi|6324725|ref|NP_014794.1| second largest subunit of RNA polymerase II; Rpb2p [Saccharomyces cerevisiae] gi|2507349|...
Match: gi|194386684|dbj|BAG61152.1| score: 1425 e-value: 0 Identity: 68.03% Span: 3198bp (78.0%) Frame: 2
unnamed

153 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 7 hits recorded
Match: At4G21710.1 score: 2189 e-value: 0 Identity: 94.72% Span: 3522bp (85.9%) Frame: 2
Symbols: EMB1989, RPB2, NRPB2 | NRPB2 (EMBRYO DEFECTIVE 1989); DNA binding | chr4:11535696-11542212 REVERSE
Match: At5G45140.1 score: 663 e-value: 0 Identity: 36.29% Span: 3456bp (84.3%) Frame: 2
Symbols: NRPC2 | NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase | chr5:18264643-18274...
Match: At3G23780.1 score: 617 e-value: 2e-176 Identity: 35.07% Span: 3486bp (85.0%) Frame: 2
Symbols: DRD2, NRPD2, NRPD2a | NRPD2a (NUCLEAR RNA POLYMERASE D 2A); DNA binding / DNA-directed RNA polymerase | chr...
Match: At3G18090.1 score: 580 e-value: 3e-165 Identity: 35.9% Span: 3177bp (77.5%) Frame: 2
Symbols: NRPD2b | NRPD2b (nuclear RNA polymerase D 2b); DNA binding / DNA-directed RNA polymerase | chr3:6195329-620...
Match: At1G29940.1 score: 299 e-value: 1e-80 Identity: 35.89% Span: 1443bp (35.2%) Frame: 2
Symbols: NRPA2 | NRPA2 (nuclear RNA polymerase A 2); DNA-directed RNA polymerase | chr1:10479306-10486654 REVERSE
Match: AtCG00190.1 score: 147 e-value: 5e-35 Identity: 27.69% Span: 1026bp (25.0%) Frame: 2
Symbols: RPOB | Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a...
Match: At1G29940.1 score: 78.2 e-value: 4e-14 Identity: 21.86% Span: 1509bp (36.8%) Frame: 2
Symbols: NRPA2 | NRPA2 (nuclear RNA polymerase A 2); DNA-directed RNA polymerase | chr1:10479306-10486654 REVERSE

swissprot [blastx] Showing best 100 hits recorded
Match: Q42877 score: 2303 e-value: 0 Identity: 99.92% Span: 3531bp (86.1%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum GN=RPB2 PE=2 SV=1
Match: P38420 score: 2189 e-value: 0 Identity: 94.72% Span: 3522bp (85.9%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis thaliana GN=RPB135 PE=2 SV=2
Match: Q54J75 score: 1607 e-value: 0 Identity: 69.83% Span: 3492bp (85.1%) Frame: 2
DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1
Match: P30876 score: 1520 e-value: 0 Identity: 66.44% Span: 3504bp (85.4%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens GN=POLR2B PE=1 SV=1
Match: Q8CFI7 score: 1519 e-value: 0 Identity: 66.36% Span: 3504bp (85.4%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus GN=Polr2b PE=2 SV=2
Match: P08266 score: 1493 e-value: 0 Identity: 64.89% Span: 3525bp (85.9%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Drosophila melanogaster GN=RpII140 PE=2 SV=2
Match: Q02061 score: 1469 e-value: 0 Identity: 62.98% Span: 3504bp (85.4%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe GN=rpb2 PE=1 SV=2
Match: Q10578 score: 1459 e-value: 0 Identity: 63.58% Span: 3522bp (85.9%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Caenorhabditis elegans GN=rpb-2 PE=2 SV=2
Match: A5DHT2 score: 1436 e-value: 0 Identity: 60.8% Span: 3525bp (85.9%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Pichia guilliermondii GN=RPB2 PE=3 SV=3
Match: P08518 score: 1427 e-value: 0 Identity: 61.3% Span: 3510bp (85.6%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Saccharomyces cerevisiae GN=RPB2 PE=1 SV=2
Match: Q6FLD5 score: 1427 e-value: 0 Identity: 60.82% Span: 3528bp (86.0%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Candida glabrata GN=RPB2 PE=3 SV=1
Match: Q753Q4 score: 1418 e-value: 0 Identity: 60.86% Span: 3501bp (85.3%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Ashbya gossypii GN=RPB2 PE=3 SV=1
Match: Q8SR75 score: 1340 e-value: 0 Identity: 58.78% Span: 3477bp (84.8%) Frame: 2
DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi GN=RPB2 PE=3 SV=1
Match: P31814 score: 837 e-value: 0 Identity: 41.19% Span: 3471bp (84.6%) Frame: 2
DNA-directed RNA polymerase subunit B OS=Thermococcus celer GN=rpoB PE=3 SV=1
Match: P11513 score: 825 e-value: 0 Identity: 42.43% Span: 3462bp (84.4%) Frame: 2
DNA-directed RNA polymerase subunit B OS=Sulfolobus acidocaldarius GN=rpoB PE=3 SV=2
Match: Q10233 score: 729 e-value: 0 Identity: 38.82% Span: 3465bp (84.5%) Frame: 2
DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1
Match: Q03587 score: 723 e-value: 0 Identity: 37.06% Span: 3447bp (84.0%) Frame: 2
DNA-directed RNA polymerase subunit B OS=Thermoplasma acidophilum GN=rpoB PE=3 SV=1
Match: Q9NW08 score: 723 e-value: 0 Identity: 38.29% Span: 3465bp (84.5%) Frame: 2
DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens GN=POLR3B PE=1 SV=2
Match: P59470 score: 723 e-value: 0 Identity: 38.29% Span: 3465bp (84.5%) Frame: 2
DNA-directed RNA polymerase III subunit RPC2 OS=Mus musculus GN=Polr3b PE=2 SV=2
Match: P25167 score: 708 e-value: 0 Identity: 36.96% Span: 3459bp (84.3%) Frame: 2
DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila melanogaster GN=RpIII128 PE=1 SV=2
Match: P22276 score: 706 e-value: 0 Identity: 37.55% Span: 3516bp (85.7%) Frame: 2
DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2
Match: Q7T6X7 score: 696 e-value: 0 Identity: 37.56% Span: 3495bp (85.2%) Frame: 2
DNA-directed RNA polymerase subunit 2 OS=Acanthamoeba polyphaga mimivirus GN=RPO2 PE=1 SV=2
Match: O27124 score: 510 e-value: 3e-143 Identity: 44.93% Span: 1827bp (44.5%) Frame: 2
DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum GN=rpoB1 PE=3 SV=1
Match: P09845 score: 502 e-value: 6e-141 Identity: 45.02% Span: 1827bp (44.5%) Frame: 2
DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum (strain Winter) GN=rpoB1 PE=3 SV=2
Match: P15351 score: 468 e-value: 1e-130 Identity: 42.39% Span: 1821bp (44.4%) Frame: 2
DNA-directed RNA polymerase subunit B' OS=Halobacterium salinarium GN=rpoB1 PE=1 SV=3
Match: Q60181 score: 468 e-value: 2e-130 Identity: 44.39% Span: 1818bp (44.3%) Frame: 2
DNA-directed RNA polymerase subunit B' OS=Methanocaldococcus jannaschii GN=rpoB1 PE=3 SV=1
Match: O28392 score: 466 e-value: 5e-130 Identity: 43.54% Span: 1824bp (44.5%) Frame: 2
DNA-directed RNA polymerase subunit B' OS=Archaeoglobus fulgidus GN=rpoB1 PE=4 SV=1
Match: Q54IZ9 score: 451 e-value: 1e-125 Identity: 40.85% Span: 1959bp (47.8%) Frame: 2
DNA-directed RNA polymerase III subunit rpc2 OS=Dictyostelium discoideum GN=polr3b PE=3 SV=1
Match: P41557 score: 450 e-value: 4e-125 Identity: 42.44% Span: 1818bp (44.3%) Frame: 2
DNA-directed RNA polymerase subunit B' OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpoB1 PE=3 SV=2
Match: P42487 score: 432 e-value: 8e-120 Identity: 28.69% Span: 3414bp (83.2%) Frame: 2
DNA-directed RNA polymerase subunit 2 OS=African swine fever virus (strain BA71V) GN=EP1242L
Match: O74633 score: 377 e-value: 3e-103 Identity: 28.43% Span: 3294bp (80.3%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Neurospora crassa GN=acr-2 PE=1 SV=2
Match: O27123 score: 332 e-value: 1e-89 Identity: 35.35% Span: 1584bp (38.6%) Frame: 2
DNA-directed RNA polymerase subunit B'' OS=Methanobacterium thermoautotrophicum GN=rpoB2
Match: P09844 score: 326 e-value: 8e-88 Identity: 34.9% Span: 1602bp (39.1%) Frame: 2
DNA-directed RNA polymerase subunit B'' OS=Methanobacterium thermoautotrophicum (strain Winter) GN=rpoB2
Match: Q58444 score: 323 e-value: 7e-87 Identity: 35.39% Span: 1575bp (38.4%) Frame: 2
DNA-directed RNA polymerase subunit B'' OS=Methanocaldococcus jannaschii GN=rpoB2
Match: P41558 score: 322 e-value: 1e-86 Identity: 35.65% Span: 1575bp (38.4%) Frame: 2
DNA-directed RNA polymerase subunit B'' OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpoB2
Match: Q5REE8 score: 317 e-value: 5e-85 Identity: 38.17% Span: 1446bp (35.3%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Pongo abelii GN=POLR1B PE=2 SV=1
Match: Q9H9Y6 score: 317 e-value: 3e-85 Identity: 37.85% Span: 1446bp (35.3%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Homo sapiens GN=POLR1B PE=1 SV=2
Match: P70700 score: 316 e-value: 8e-85 Identity: 38.05% Span: 1446bp (35.3%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Mus musculus GN=Polr1b PE=2 SV=1
Match: O54888 score: 315 e-value: 2e-84 Identity: 39.26% Span: 1407bp (34.3%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Rattus norvegicus GN=Polr1b PE=1 SV=1
Match: P28365 score: 312 e-value: 1e-83 Identity: 37.72% Span: 1413bp (34.4%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Euplotes octocarinatus GN=RPA2 PE=3 SV=2
Match: Q54BM1 score: 308 e-value: 2e-82 Identity: 37.43% Span: 1452bp (35.4%) Frame: 2
DNA-directed RNA polymerase I subunit rpa2 OS=Dictyostelium discoideum GN=polr1b PE=3 SV=1
Match: Q9P7X8 score: 306 e-value: 5e-82 Identity: 40.4% Span: 1314bp (32.0%) Frame: 2
Probable DNA-directed RNA polymerase I subunit RPA2 OS=Schizosaccharomyces pombe GN=rpa2 PE=2 SV=2
Match: P22138 score: 300 e-value: 6e-80 Identity: 39.47% Span: 1320bp (32.2%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Saccharomyces cerevisiae GN=RPA2 PE=1 SV=1
Match: P20028 score: 293 e-value: 7e-78 Identity: 35.88% Span: 1467bp (35.8%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Drosophila melanogaster GN=RpI135 PE=2 SV=2
Match: P15352 score: 284 e-value: 3e-75 Identity: 34.05% Span: 1527bp (37.2%) Frame: 2
DNA-directed RNA polymerase subunit B'' OS=Halobacterium salinarium GN=rpoB2
Match: Q75DS1 score: 270 e-value: 5e-71 Identity: 38.3% Span: 1272bp (31.0%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Ashbya gossypii GN=RPA2 PE=3 SV=1
Match: Q54IZ9 score: 262 e-value: 1e-68 Identity: 31.63% Span: 1539bp (37.5%) Frame: 2
DNA-directed RNA polymerase III subunit rpc2 OS=Dictyostelium discoideum GN=polr3b PE=3 SV=1
Match: Q8JL90 score: 216 e-value: 1e-54 Identity: 26.36% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Ectromelia virus (strain Moscow) GN=RPO132
Match: O57230 score: 214 e-value: 3e-54 Identity: 26.33% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Vaccinia virus (strain Ankara) GN=RPO132
Match: Q9JF79 score: 214 e-value: 3e-54 Identity: 26.33% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Vaccinia virus (strain Tian Tan) GN=RPO132
Match: Q76ZP7 score: 214 e-value: 4e-54 Identity: 26.22% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Vaccinia virus (strain Western Reserve / WR) GN=RPO132
Match: P17474 score: 214 e-value: 3e-54 Identity: 26.33% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Cowpox virus (strain Brighton Red) GN=RPO132
Match: P33811 score: 214 e-value: 3e-54 Identity: 26.39% Span: 2616bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Variola virus GN=RPO132
Match: Q6RZF8 score: 214 e-value: 3e-54 Identity: 26.33% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Rabbitpox virus (strain Utrecht) GN=RPO132
Match: P68694 score: 214 e-value: 4e-54 Identity: 26.22% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Vaccinia virus (strain Copenhagen) GN=RPO132
Match: Q80DV1 score: 213 e-value: 7e-54 Identity: 26.12% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Cowpox virus (strain GRI-90 / Grishak) GN=RPO132
Match: Q775Q3 score: 212 e-value: 2e-53 Identity: 26.22% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Camelpox virus (strain CMS) GN=RPO132
Match: Q8V2N1 score: 212 e-value: 2e-53 Identity: 26.22% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Camelpox virus (strain M-96) GN=RPO132
Match: Q8V4V3 score: 209 e-value: 8e-53 Identity: 26.01% Span: 2619bp (63.8%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Monkeypox virus GN=RPO132
Match: Q9J544 score: 209 e-value: 1e-52 Identity: 27.92% Span: 2025bp (49.4%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide OS=Fowlpox virus GN=RPO132
Match: P16716 score: 209 e-value: 1e-52 Identity: 27.18% Span: 2037bp (49.7%) Frame: 2
DNA-directed RNA polymerase 132 kDa polypeptide (Fragment) OS=Sheeppox virus (strain KS-1) GN=RPO132
Match: Q03V60 score: 195 e-value: 2e-48 Identity: 34.43% Span: 1041bp (25.4%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 5...
Match: Q18CF1 score: 194 e-value: 5e-48 Identity: 30.46% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Clostridium difficile (strain 630) GN=rpoB
Match: P47767 score: 193 e-value: 8e-48 Identity: 32.39% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Spiroplasma citri GN=rpoB
Match: A5VLL4 score: 192 e-value: 1e-47 Identity: 33.24% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus reuteri (strain ATCC 23272 / DSM 20016 / F275) GN=rpoB
Match: Q88XZ3 score: 191 e-value: 4e-47 Identity: 33.61% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus plantarum GN=rpoB
Match: Q6F0L7 score: 190 e-value: 5e-47 Identity: 33.24% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Mesoplasma florum GN=rpoB
Match: A5N4N9 score: 189 e-value: 1e-46 Identity: 29.16% Span: 1197bp (29.2%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rpoB
Match: Q04E85 score: 189 e-value: 1e-46 Identity: 32.87% Span: 1026bp (25.0%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=rpoB
Match: Q03EA9 score: 188 e-value: 3e-46 Identity: 32.58% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpoB
Match: Q6MRX6 score: 188 e-value: 2e-46 Identity: 34.35% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Mycoplasma mycoides subsp. mycoides SC GN=rpoB
Match: Q2ST48 score: 188 e-value: 3e-46 Identity: 34.35% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 273...
Match: Q04C22 score: 187 e-value: 4e-46 Identity: 33.15% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rpoB
Match: Q1GBM5 score: 187 e-value: 4e-46 Identity: 33.15% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 2008...
Match: Q3A9Q7 score: 187 e-value: 6e-46 Identity: 29.81% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rpoB
Match: Q38UQ2 score: 187 e-value: 6e-46 Identity: 32.49% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rpoB
Match: Q250P0 score: 186 e-value: 1e-45 Identity: 29.09% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Desulfitobacterium hafniense (strain Y51) GN=rpoB
Match: Q03PU9 score: 186 e-value: 7e-46 Identity: 33.33% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpoB
Match: A3DIZ4 score: 186 e-value: 7e-46 Identity: 32.11% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rpoB
Match: A9NEL7 score: 186 e-value: 1e-45 Identity: 32.12% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Acholeplasma laidlawii (strain PG-8A) GN=rpoB
Match: Q74L95 score: 185 e-value: 2e-45 Identity: 32.58% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus johnsonii GN=rpoB
Match: A6TWJ0 score: 185 e-value: 2e-45 Identity: 29.02% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=rpoB
Match: Q046D2 score: 185 e-value: 2e-45 Identity: 32.58% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rpoB
Match: Q1WVA5 score: 185 e-value: 2e-45 Identity: 32.58% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rpoB
Match: Q2RFN9 score: 184 e-value: 4e-45 Identity: 28.85% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Moorella thermoacetica (strain ATCC 39073) GN=rpoB
Match: A8MLD2 score: 184 e-value: 5e-45 Identity: 28.3% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=rpoB
Match: Q661M9 score: 184 e-value: 4e-45 Identity: 31.3% Span: 1023bp (24.9%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Borrelia garinii GN=rpoB
Match: Q5FM97 score: 183 e-value: 8e-45 Identity: 32.3% Span: 1017bp (24.8%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Lactobacillus acidophilus GN=rpoB
Match: Q67JT3 score: 183 e-value: 6e-45 Identity: 30.12% Span: 1197bp (29.2%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Symbiobacterium thermophilum GN=rpoB
Match: A4XI30 score: 183 e-value: 6e-45 Identity: 29.74% Span: 1200bp (29.3%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rpoB
Match: A0PXT8 score: 183 e-value: 8e-45 Identity: 28.95% Span: 1206bp (29.4%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Clostridium novyi (strain NT) GN=rpoB
Match: Q890N4 score: 182 e-value: 1e-44 Identity: 28.92% Span: 1197bp (29.2%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Clostridium tetani GN=rpoB
Match: Q54BM1 score: 133 e-value: 7e-30 Identity: 25.92% Span: 1539bp (37.5%) Frame: 2
DNA-directed RNA polymerase I subunit rpa2 OS=Dictyostelium discoideum GN=polr1b PE=3 SV=1
Match: Q75DS1 score: 120 e-value: 6e-26 Identity: 25.85% Span: 1320bp (32.2%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Ashbya gossypii GN=RPA2 PE=3 SV=1
Match: P22138 score: 108 e-value: 3e-22 Identity: 22.44% Span: 1419bp (34.6%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Saccharomyces cerevisiae GN=RPA2 PE=1 SV=1
Match: P28365 score: 107 e-value: 7e-22 Identity: 25.57% Span: 1512bp (36.9%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Euplotes octocarinatus GN=RPA2 PE=3 SV=2
Match: Q9P7X8 score: 102 e-value: 2e-20 Identity: 24.15% Span: 1335bp (32.5%) Frame: 2
Probable DNA-directed RNA polymerase I subunit RPA2 OS=Schizosaccharomyces pombe GN=rpa2 PE=2 SV=2
Match: Q2RFN9 score: 91.3 e-value: 4e-17 Identity: 24.62% Span: 1515bp (36.9%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Moorella thermoacetica (strain ATCC 39073) GN=rpoB
Match: Q3A9Q7 score: 90.1 e-value: 9e-17 Identity: 25% Span: 1476bp (36.0%) Frame: 2
DNA-directed RNA polymerase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rpoB
Match: P20028 score: 87.8 e-value: 5e-16 Identity: 22.99% Span: 1485bp (36.2%) Frame: 2
DNA-directed RNA polymerase I subunit RPA2 OS=Drosophila melanogaster GN=RpI135 PE=2 SV=2

159 lower scoring hits censored -- only 100 best hits are stored.