| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|77552372|gb|ABA95169.1| |
score: 145.6 |
e-value: 2.9e-34 |
Identity: 88.31% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|77552372|gb|ABA95169.1| small nuclear ribonucleoprotein f, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50252055|dbj|BAD27986.1| |
score: 145.6 |
e-value: 2.9e-34 |
Identity: 88.31% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|50252055|dbj|BAD27986.1| putative small nuclear ribonucleoprotein polypeptide F [Oryza sativa (japonica cultivar-g... |
| Match: gi|7269922|emb|CAB81015.1| |
score: 142.9 |
e-value: 1.9e-33 |
Identity: 85.71% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|7269922|emb|CAB81015.1| snRNP Sm protein F-like [Arabidopsis thaliana] >gi|5730132|emb|CAB52466.1| snRNP Sm protei... |
| Match: gi|77552373|gb|ABA95170.1| |
score: 142.1 |
e-value: 3.2e-33 |
Identity: 88% |
Span: 225bp (52.3%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|74353864|gb|AAI02193.1| |
score: 131.7 |
e-value: 4.4e-30 |
Identity: 71.08% |
Span: 249bp (57.9%) |
Frame: 1 |
| gi|74353864|gb|AAI02193.1| Unknown (protein for IMAGE:7943169) [Bos taurus] |
| Match: gi|62652156|ref|XP_345815.2| |
score: 131.7 |
e-value: 4.4e-30 |
Identity: 77.63% |
Span: 228bp (53.0%) |
Frame: 1 |
| gi|62652156|ref|XP_345815.2| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|50728518|ref|XP_416157.1| |
score: 130.6 |
e-value: 9.7e-30 |
Identity: 70.59% |
Span: 255bp (59.3%) |
Frame: 1 |
| gi|50728518|ref|XP_416157.1| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|33876795|gb|AAH02505.2| |
score: 130.2 |
e-value: 1.3e-29 |
Identity: 70.59% |
Span: 255bp (59.3%) |
Frame: 1 |
| gi|33876795|gb|AAH02505.2| SNRPF protein [Homo sapiens] |
| Match: gi|55638675|ref|XP_509281.1| |
score: 130.2 |
e-value: 1.3e-29 |
Identity: 70.59% |
Span: 255bp (59.3%) |
Frame: 1 |
| gi|55638675|ref|XP_509281.1| PREDICTED: similar to SNRPF protein [Pan troglodytes] |
| Match: gi|39645845|gb|AAH63397.1| |
score: 130.2 |
e-value: 1.3e-29 |
Identity: 70.59% |
Span: 255bp (59.3%) |
Frame: 1 |
| gi|39645845|gb|AAH63397.1| Unknown (protein for IMAGE:5176590) [Homo sapiens] |
| Match: gi|41946811|gb|AAH66015.1| |
score: 129.8 |
e-value: 1.7e-29 |
Identity: 75.32% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|41946811|gb|AAH66015.1| Unknown (protein for IMAGE:5715059) [Mus musculus] |
| Match: gi|73978207|ref|XP_539726.2| |
score: 129.8 |
e-value: 1.7e-29 |
Identity: 75.32% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|73978207|ref|XP_539726.2| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|495021|gb|AAA28445.1| |
score: 129.4 |
e-value: 2.2e-29 |
Identity: 78.67% |
Span: 225bp (52.3%) |
Frame: 1 |
| gi|495021|gb|AAA28445.1| membrane-associated protein |
| Match: gi|48145619|emb|CAG33032.1| |
score: 129.4 |
e-value: 2.2e-29 |
Identity: 78.38% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|48145619|emb|CAG33032.1| SNRPF [Homo sapiens] |
| Match: gi|49900002|gb|AAH77006.1| |
score: 129.4 |
e-value: 2.2e-29 |
Identity: 78.38% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|49900002|gb|AAH77006.1| MGC89662 protein [Xenopus tropicalis] >gi|4507131|ref|NP_003086.1| small nuclear ribonucle... |
| Match: gi|22024001|ref|NP_523708.2| |
score: 129.4 |
e-value: 2.2e-29 |
Identity: 78.67% |
Span: 225bp (52.3%) |
Frame: 1 |
| gi|22024001|ref|NP_523708.2| Developmental embryonic B CG16792-PA [Drosophila melanogaster] gi|29337191|sp|Q24297|RUX... |
| Match: gi|72168562|ref|XP_796806.1| |
score: 129.4 |
e-value: 2.2e-29 |
Identity: 70.45% |
Span: 261bp (60.7%) |
Frame: 1 |
| gi|72168562|ref|XP_796806.1| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|38079111|ref|XP_357414.1| |
score: 128.6 |
e-value: 3.7e-29 |
Identity: 74.03% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|38079111|ref|XP_357414.1| similar to SNRPF protein [Mus musculus] |
| Match: gi|42415804|gb|AAS15770.1| |
score: 128.6 |
e-value: 3.7e-29 |
Identity: 79.45% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|42415804|gb|AAS15770.1| DebB [Drosophila simulans] |
| Match: gi|49619143|gb|AAT68156.1| |
score: 128.6 |
e-value: 3.7e-29 |
Identity: 77.03% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|49619143|gb|AAT68156.1| small nuclear ribonucleoprotein F [Danio rerio] >gi|51468014|ref|NP_001003881.1| small nuc... |
| Match: gi|47218337|emb|CAG04169.1| |
score: 128.6 |
e-value: 3.7e-29 |
Identity: 75% |
Span: 228bp (53.0%) |
Frame: 1 |
| gi|47218337|emb|CAG04169.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|74189295|dbj|BAE22683.1| |
score: 128.3 |
e-value: 4.8e-29 |
Identity: 77.03% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|74189295|dbj|BAE22683.1| unnamed protein product [Mus musculus] |
| Match: gi|30177439|gb|EAA07677.2| |
score: 126.3 |
e-value: 1.8e-28 |
Identity: 75.34% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|30177439|gb|EAA07677.2| ENSANGP00000002801 [Anopheles gambiae str. PEST] >gi|31212897|ref|XP_312266.1| ENSANGP0000... |
| Match: gi|39589637|emb|CAE66872.1| |
score: 123.6 |
e-value: 1.2e-27 |
Identity: 79.73% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|39589637|emb|CAE66872.1| Hypothetical protein CBG12250 [Caenorhabditis briggsae] |
| Match: gi|289767|gb|AAA28212.1| |
score: 120.2 |
e-value: 1.3e-26 |
Identity: 77.33% |
Span: 225bp (52.3%) |
Frame: 1 |
| gi|289767|gb|AAA28212.1| Small nuclear ribonucleoprotein protein 5 [Caenorhabditis elegans] >gi|17557029|ref|NP_49870... |
| Match: gi|3560134|emb|CAA20721.1| |
score: 110.5 |
e-value: 1e-23 |
Identity: 71.23% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|3560134|emb|CAA20721.1| SPBC4F6.01 [Schizosaccharomyces pombe] >gi|3130040|emb|CAA19017.1| SPBC3E7.14 [Schizosacch... |
| Match: gi|27704896|ref|XP_230870.1| |
score: 109.4 |
e-value: 2.3e-23 |
Identity: 67.61% |
Span: 213bp (49.5%) |
Frame: 1 |
| gi|27704896|ref|XP_230870.1| similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) [Ratt... |
| Match: gi|57226412|gb|AAW42872.1| |
score: 106.7 |
e-value: 1.5e-22 |
Identity: 68.49% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|57226412|gb|AAW42872.1| mRNA processing-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] ... |
| Match: gi|60691036|gb|AAX30542.1| |
score: 106.3 |
e-value: 2e-22 |
Identity: 72.06% |
Span: 204bp (47.4%) |
Frame: 1 |
| gi|60691036|gb|AAX30542.1| SJCHGC04779 protein [Schistosoma japonicum] |
| Match: gi|76618925|ref|XP_872090.1| |
score: 100.5 |
e-value: 1.1e-20 |
Identity: 56.18% |
Span: 249bp (57.9%) |
Frame: 1 |
| gi|76618925|ref|XP_872090.1| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|39943768|ref|XP_361421.1| |
score: 97.83 |
e-value: 7e-20 |
Identity: 61.33% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|39943768|ref|XP_361421.1| hypothetical protein MG03895.4 [Magnaporthe grisea 70-15] |
| Match: gi|65305358|emb|CAI73683.1| |
score: 96.29 |
e-value: 2e-19 |
Identity: 66.2% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|65305358|emb|CAI73683.1| small nuclear ribonucleoprotein f, putative [Theileria annulata] |
| Match: gi|68352860|gb|EAN33620.1| |
score: 96.29 |
e-value: 2e-19 |
Identity: 66.2% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|68352860|gb|EAN33620.1| small nuclear ribonucleoprotein F, putative [Theileria parva] >gi|71032523|ref|XP_765903.1... |
| Match: gi|42546114|gb|EAA68957.1| |
score: 95.52 |
e-value: 3.5e-19 |
Identity: 58.67% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|42546114|gb|EAA68957.1| hypothetical protein FG01381.1 [Gibberella zeae PH-1] |
| Match: gi|66815943|ref|XP_641988.1| |
score: 94.36 |
e-value: 7.7e-19 |
Identity: 64.29% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|66815943|ref|XP_641988.1| hypothetical protein DDB0206218 [Dictyostelium discoideum] >gi|60470031|gb|EAL68012.1| h... |
| Match: gi|7800974|emb|CAB91372.1| |
score: 93.2 |
e-value: 1.7e-18 |
Identity: 60% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|7800974|emb|CAB91372.1| related to snRNP protein SMX3 [Neurospora crassa] >gi|30580500|sp|Q9P5Z8|RUXF_NEUCR Probab... |
| Match: gi|62318628|dbj|BAD95080.1| |
score: 92.82 |
e-value: 2.2e-18 |
Identity: 86% |
Span: 150bp (34.9%) |
Frame: 1 |
| gi|62318628|dbj|BAD95080.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|50543240|ref|XP_499786.1| |
score: 91.66 |
e-value: 5e-18 |
Identity: 64.29% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|50543240|ref|XP_499786.1| hypothetical protein [Yarrowia lipolytica] >gi|49645651|emb|CAG83711.1| unnamed protein ... |
| Match: gi|67476154|ref|XP_653680.1| |
score: 89.35 |
e-value: 2.5e-17 |
Identity: 64.06% |
Span: 192bp (44.7%) |
Frame: 1 |
| gi|67476154|ref|XP_653680.1| small nuclear ribonucleoprotein F, putative [Entamoeba histolytica HM-1:IMSS] >gi|564706... |
| Match: gi|23496205|gb|AAN35864.1| |
score: 88.2 |
e-value: 5.5e-17 |
Identity: 58.21% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|23496205|gb|AAN35864.1| small nuclear ribonucleoprotein F, putative [Plasmodium falciparum 3D7] >gi|23508471|ref|N... |
| Match: gi|6325440|ref|NP_015508.1| |
score: 87.43 |
e-value: 9.4e-17 |
Identity: 59.49% |
Span: 234bp (54.4%) |
Frame: 1 |
| gi|6325440|ref|NP_015508.1| Sm or Sm-like snRNP protein; Smx3p [Saccharomyces cerevisiae] gi|1711405|sp|P54999|RUXF_Y... |
| Match: gi|27574149|pdb|1N9R|G |
score: 87.43 |
e-value: 9.4e-17 |
Identity: 59.49% |
Span: 234bp (54.4%) |
Frame: 1 |
| gi|27574149|pdb|1N9R|G Chain G, Crystal Structure Of A Heptameric Ring Complex Of Yeast Smf In Spacegroup P4122 >gi|2... |
| Match: gi|50288725|ref|XP_446792.1| |
score: 86.66 |
e-value: 1.6e-16 |
Identity: 55.71% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|50288725|ref|XP_446792.1| unnamed protein product [Candida glabrata] >gi|49526100|emb|CAG59719.1| unnamed protein ... |
| Match: gi|70931673|ref|XP_737485.1| |
score: 85.11 |
e-value: 4.7e-16 |
Identity: 61.29% |
Span: 186bp (43.3%) |
Frame: 1 |
| gi|70931673|ref|XP_737485.1| small nuclear ribonucleoprotein F, putative [Plasmodium chabaudi] >gi|68068315|ref|XP_67... |
| Match: gi|27574163|pdb|1N9S|N |
score: 83.57 |
e-value: 1.4e-15 |
Identity: 58.23% |
Span: 234bp (54.4%) |
Frame: 1 |
| gi|27574163|pdb|1N9S|N Chain N, Crystal Structure Of Yeast Smf In Spacegroup P43212 >gi|27574162|pdb|1N9S|M Chain M, ... |
| Match: gi|50308333|ref|XP_454168.1| |
score: 80.49 |
e-value: 1.2e-14 |
Identity: 57.14% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|50308333|ref|XP_454168.1| unnamed protein product [Kluyveromyces lactis] >gi|49643303|emb|CAG99255.1| unnamed prot... |
| Match: gi|49655404|emb|CAG87972.1| |
score: 77.8 |
e-value: 7.5e-14 |
Identity: 55.41% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|49655404|emb|CAG87972.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50422347|ref|XP_459736.1| unna... |
| Match: gi|67901238|ref|XP_680875.1| |
score: 73.94 |
e-value: 1.1e-12 |
Identity: 55.56% |
Span: 186bp (43.3%) |
Frame: 1 |
| gi|67901238|ref|XP_680875.1| hypothetical protein AN7606.2 [Aspergillus nidulans FGSC A4] >gi|40742996|gb|EAA62186.1|... |
| Match: gi|62665115|ref|XP_574220.1| |
score: 72.4 |
e-value: 3.1e-12 |
Identity: 43.75% |
Span: 240bp (55.8%) |
Frame: 1 |
| gi|62665115|ref|XP_574220.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) [Rattus no... |
| Match: gi|11602707|emb|CAC18540.1| |
score: 71.25 |
e-value: 7e-12 |
Identity: 50% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|11602707|emb|CAC18540.1| putative U6-snRNA-associated protein [Echinococcus multilocularis] |
| Match: gi|13812032|ref|NP_113163.1| |
score: 70.48 |
e-value: 1.2e-11 |
Identity: 50% |
Span: 204bp (47.4%) |
Frame: 1 |
| gi|13812032|ref|NP_113163.1| small nuclear ribonucleoprotein F [Guillardia theta] gi|25329696|pir||C90130 small nucle... |
| Match: gi|60687576|gb|AAX30121.1| |
score: 70.09 |
e-value: 1.6e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|60687576|gb|AAX30121.1| putative U6-snRNA-associated protein [Schistosoma japonicum] |
| Match: gi|14916400|gb|AAK73913.1| |
score: 69.71 |
e-value: 2e-11 |
Identity: 49.25% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|14916400|gb|AAK73913.1| Lsm sm-like protein protein 6 [Caenorhabditis elegans] >gi|17510579|ref|NP_490883.1| LSM S... |
| Match: gi|50908869|ref|XP_465923.1| |
score: 69.71 |
e-value: 2e-11 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|50908869|ref|XP_465923.1| putative Sm protein F [Oryza sativa (japonica cultivar-group)] >gi|48716974|dbj|BAD23667... |
| Match: gi|5901998|ref|NP_009011.1| |
score: 69.71 |
e-value: 2e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| U6 snRNA-associated Sm-like protein LSm6 [Homo sapiens] >gi113865835|ref|NP_084421.1| U6 snRNA-associated Sm-like pro... |
| Match: gi|39589389|emb|CAE74418.1| |
score: 69.71 |
e-value: 2e-11 |
Identity: 49.25% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|39589389|emb|CAE74418.1| Hypothetical protein CBG22150 [Caenorhabditis briggsae] |
| Match: gi|50746299|ref|XP_420431.1| |
score: 69.71 |
e-value: 2e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|50746299|ref|XP_420431.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) [Gallus ga... |
| Match: gi|73978282|ref|XP_855162.1| |
score: 69.71 |
e-value: 2e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Canis familiaris] |
| Match: gi|21554327|gb|AAM63434.1| |
score: 68.94 |
e-value: 3.5e-11 |
Identity: 46.38% |
Span: 207bp (48.1%) |
Frame: 1 |
| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] |
| Match: gi|7019675|emb|CAB75800.1| |
score: 68.94 |
e-value: 3.5e-11 |
Identity: 46.38% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|7019675|emb|CAB75800.1| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] >gi|28394039|gb|AAO42427.1| put... |
| Match: gi|30725284|gb|AAP37664.1| |
score: 68.94 |
e-value: 3.5e-11 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|30725284|gb|AAP37664.1| At2g43810 [Arabidopsis thaliana] >gi|2281089|gb|AAB64025.1| putative small nuclear ribonuc... |
| Match: gi|72032500|ref|XP_799246.1| |
score: 68.55 |
e-value: 4.5e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|72032500|ref|XP_799246.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Strongylocentrotus purpu... |
| Match: gi|71651762|ref|XP_814552.1| |
score: 68.55 |
e-value: 4.5e-11 |
Identity: 54.29% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|71651762|ref|XP_814552.1| small nuclear ribonucleoprotein Sm-F, putative [Trypanosoma cruzi] >gi|71649985|ref|XP_8... |
| Match: gi|55238130|gb|EAA11294.2| |
score: 68.17 |
e-value: 5.9e-11 |
Identity: 49.21% |
Span: 189bp (44.0%) |
Frame: 1 |
| gi|55238130|gb|EAA11294.2| ENSANGP00000021121 [Anopheles gambiae str. PEST] >gi|58387098|ref|XP_315329.2| ENSANGP0000... |
| Match: gi|44983228|gb|AAS52410.1| |
score: 68.17 |
e-value: 5.9e-11 |
Identity: 48.57% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|44983228|gb|AAS52410.1| AEL274Cp [Ashbya gossypii ATCC 10895] >gi|45190332|ref|NP_984586.1| AEL274Cp [Eremothecium... |
| Match: gi|47217355|emb|CAG11060.1| |
score: 68.17 |
e-value: 5.9e-11 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|47217355|emb|CAG11060.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|66853523|gb|EAL93847.1| |
score: 67.78 |
e-value: 7.7e-11 |
Identity: 48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|66853523|gb|EAL93847.1| small nuclear ribonucleoprotein SmF, putative [Aspergillus fumigatus Af293] >gi|71002408|r... |
| Match: gi|48735113|gb|AAH72549.1| |
score: 67.78 |
e-value: 7.7e-11 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|48735113|gb|AAH72549.1| Unknown (protein for MGC:92379) [Danio rerio] |
| Match: gi|5832405|emb|CAB54975.1| |
score: 67.4 |
e-value: 1e-10 |
Identity: 46.27% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|5832405|emb|CAB54975.1| SPAC2F3.17c [Schizosaccharomyces pombe] >gi|19115292|ref|NP_594380.1| hypothetical protein... |
| Match: gi|20861373|ref|XP_134104.1| |
score: 66.63 |
e-value: 1.7e-10 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|20861373|ref|XP_134104.1| RIKEN cDNA 2410088K19 [Mus musculus] |
| Match: gi|24656550|ref|NP_611528.1| |
score: 66.63 |
e-value: 1.7e-10 |
Identity: 49.21% |
Span: 189bp (44.0%) |
Frame: 1 |
| gi|24656550|ref|NP_611528.1| CG9344-PA [Drosophila melanogaster] gi|7291213|gb|AAF46645.1| CG9344-PA [Drosophila mela... |
| Match: gi|70906031|gb|AAZ14670.1| |
score: 66.24 |
e-value: 2.2e-10 |
Identity: 52.24% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|70906031|gb|AAZ14670.1| sm-f snRNP core complex protein, putative [Leishmania major strain Friedlin] >gi|72549482|... |
| Match: gi|67624411|ref|XP_668488.1| |
score: 65.85 |
e-value: 2.9e-10 |
Identity: 43.66% |
Span: 213bp (49.5%) |
Frame: 1 |
| gi|67624411|ref|XP_668488.1| Sm protein F [Cryptosporidium hominis] >gi|54659686|gb|EAL38252.1| Sm protein F [Cryptos... |
| Match: gi|46229796|gb|EAK90614.1| |
score: 65.85 |
e-value: 2.9e-10 |
Identity: 43.66% |
Span: 213bp (49.5%) |
Frame: 1 |
| gi|46229796|gb|EAK90614.1| small nuclear ribonucleo protein [Cryptosporidium parvum] |
| Match: gi|70831481|gb|EAN76986.1| |
score: 65.47 |
e-value: 3.8e-10 |
Identity: 54.29% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|70831481|gb|EAN76986.1| small nuclear ribonucleoprotein Sm-F [Trypanosoma brucei] >gi|71745372|ref|XP_827316.1| sm... |
| Match: gi|23619200|ref|NP_705162.1| |
score: 63.54 |
e-value: 1.5e-09 |
Identity: 42.86% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|23619200|ref|NP_705162.1| u6 snRNA-associated sm-like protein, putative [Plasmodium falciparum 3D7] gi|23615407|em... |
| Match: gi|63579085|ref|XP_488137.2| |
score: 62.77 |
e-value: 2.5e-09 |
Identity: 45.31% |
Span: 192bp (44.7%) |
Frame: 1 |
| gi|63579085|ref|XP_488137.2| PREDICTED: similar to Sm protein F [Mus musculus] |
| Match: gi|34879731|ref|XP_344138.1| |
score: 62.77 |
e-value: 2.5e-09 |
Identity: 45.31% |
Span: 192bp (44.7%) |
Frame: 1 |
| gi|34879731|ref|XP_344138.1| similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) [Rattus norvegicus] |
| Match: gi|42545628|gb|EAA68471.1| |
score: 62.77 |
e-value: 2.5e-09 |
Identity: 47.69% |
Span: 195bp (45.3%) |
Frame: 1 |
| gi|42545628|gb|EAA68471.1| hypothetical protein FG00458.1 [Gibberella zeae PH-1] |
| Match: gi|55623294|ref|XP_517469.1| |
score: 62.39 |
e-value: 3.2e-09 |
Identity: 45.16% |
Span: 186bp (43.3%) |
Frame: 1 |
| gi|55623294|ref|XP_517469.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) [Pan trogl... |
| Match: gi|66848155|gb|EAL88484.1| |
score: 60.46 |
e-value: 1.2e-08 |
Identity: 46.15% |
Span: 195bp (45.3%) |
Frame: 1 |
| gi|66848155|gb|EAL88484.1| U6 snRNA-associated Sm-like protein LSm6, putative [Aspergillus fumigatus Af293] >gi|70991... |
| Match: gi|70951963|ref|XP_745182.1| |
score: 60.46 |
e-value: 1.2e-08 |
Identity: 41.43% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|70951963|ref|XP_745182.1| u6 snRNA-associated sm-like protein, putative [Plasmodium chabaudi] >gi|56525424|emb|CAH... |
| Match: gi|68074967|ref|XP_679400.1| |
score: 60.46 |
e-value: 1.2e-08 |
Identity: 41.43% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|68074967|ref|XP_679400.1| u6 snRNA-associated sm-like protein, putative [Plasmodium berghei] >gi|56500140|emb|CAH9... |
| Match: gi|23483747|gb|EAA19315.1| |
score: 60.46 |
e-value: 1.2e-08 |
Identity: 41.43% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|23483747|gb|EAA19315.1| probable u6 snRNA-associated sm-like protein lsm6 [Plasmodium yoelii yoelii] |
| Match: gi|66819863|ref|XP_643590.1| |
score: 60.08 |
e-value: 1.6e-08 |
Identity: 44.78% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|66819863|ref|XP_643590.1| hypothetical protein DDB0202447 [Dictyostelium discoideum] >gi|60471654|gb|EAL69610.1| h... |
| Match: gi|2621731|gb|AAB85154.1| |
score: 60.08 |
e-value: 1.6e-08 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|2621731|gb|AAB85154.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] >gi|15678676|ref|NP... |
| Match: gi|20150516|pdb|1JRI|N |
score: 60.08 |
e-value: 1.6e-08 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|20150516|pdb|1JRI|N Chain N, The Crystal Structure Of An Sm-Like Archaeal Protein With Two Heptamers In The Asymme... |
| Match: gi|29726422|pdb|1LOJ|N |
score: 60.08 |
e-value: 1.6e-08 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|29726422|pdb|1LOJ|N Chain N, Crystal Structure Of A Methanobacterial Sm-Like Archaeal Protein (Smap1) Bound To Uri... |
| Match: gi|29726345|pdb|1JBM|G |
score: 60.08 |
e-value: 1.6e-08 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|29726345|pdb|1JBM|G Chain G, Heptameric Crystal Structure Of Mth649, An Sm-Like Archaeal Protein From Methanobacte... |
| Match: gi|27573935|pdb|1MGQ|G |
score: 60.08 |
e-value: 1.6e-08 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|27573935|pdb|1MGQ|G Chain G, Crystal Structure Of A Heptameric Sm-Like Protein From Methanobacterium Thermoautotro... |
| Match: gi|68135130|ref|ZP_00543408.1| |
score: 59.31 |
e-value: 2.7e-08 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|68135130|ref|ZP_00543408.1| Small nuclear ribonucleoprotein (Sm protein) [Methanosarcina barkeri str. fusaro] >gi|... |
| Match: gi|19068798|emb|CAD25266.1| |
score: 57.77 |
e-value: 8e-08 |
Identity: 43.75% |
Span: 192bp (44.7%) |
Frame: 1 |
| gi|19068798|emb|CAD25266.1| SMALL NUCLEAR RIBONUCLEOPROTEIN F [Encephalitozoon cuniculi GB-M1] >gi|19074156|ref|NP_58... |
| Match: gi|68353470|gb|EAN34230.1| |
score: 57.77 |
e-value: 8e-08 |
Identity: 40% |
Span: 210bp (48.8%) |
Frame: 1 |
| gi|68353470|gb|EAN34230.1| U6 small nuclear ribonucleoprotein, putative [Theileria parva] >gi|71033743|ref|XP_766513.... |
| Match: gi|67624211|ref|XP_668388.1| |
score: 57.38 |
e-value: 1e-07 |
Identity: 58.7% |
Span: 138bp (32.1%) |
Frame: 1 |
| gi|67624211|ref|XP_668388.1| hypothetical protein Chro.10304 [Cryptosporidium hominis] >gi|54659578|gb|EAL38148.1| hy... |
| Match: gi|21226441|ref|NP_632363.1| |
score: 57 |
e-value: 1.4e-07 |
Identity: 43.94% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|21226441|ref|NP_632363.1| putative snRNP Sm-like protein [Methanosarcina mazei Goe1] gi|30173324|sp|Q8PZZ9|RUXX_ME... |
| Match: gi|39941580|ref|XP_360327.1| |
score: 55.84 |
e-value: 3e-07 |
Identity: 46.03% |
Span: 189bp (44.0%) |
Frame: 1 |
| gi|39941580|ref|XP_360327.1| hypothetical protein MG05701.4 [Magnaporthe grisea 70-15] |
| Match: gi|57230795|gb|AAW47104.1| |
score: 55.84 |
e-value: 3e-07 |
Identity: 41.79% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|57230795|gb|AAW47104.1| u6 snRNA-associated sm-like protein lsm6, putative [Cryptococcus neoformans var. neoforman... |
| Match: gi|19917220|gb|AAM06566.1| |
score: 55.84 |
e-value: 3e-07 |
Identity: 42.42% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|19917220|gb|AAM06566.1| Sm protein [Methanosarcina acetivorans str. C2A] >gi|20092011|ref|NP_618086.1| Sm protein ... |
| Match: gi|11498481|ref|NP_069709.1| |
score: 54.68 |
e-value: 6.8e-07 |
Identity: 37.84% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|11498481|ref|NP_069709.1| snRNP, putative [Archaeoglobus fulgidus DSM 4304] gi|6094214|sp|O29386|RUXX_ARCFU Putati... |
| Match: gi|75756273|gb|ABA27168.1| |
score: 54.68 |
e-value: 6.8e-07 |
Identity: 41.27% |
Span: 186bp (43.3%) |
Frame: 1 |
| gi|75756273|gb|ABA27168.1| mRNA splicing factor snRNP-F [Bigelowiella natans] |
|
| 8 lower scoring hits censored -- only 100 best hits are stored. |
