| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|2194136|gb|AAB61111.1| |
score: 99 |
e-value: 1e-20 |
Identity: 39.57% |
Span: 387bp (89.6%) |
Frame: 1 |
| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gbU12626) [Arabidopsis thaliana] |
| Match: gi|2245104|emb|CAB10526.1| |
score: 94 |
e-value: 7e-20 |
Identity: 40.34% |
Span: 354bp (81.9%) |
Frame: 1 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268497|emb|CAB78748.1| retrotransposon like protein [Arabidop... |
| Match: gi|2244802|emb|CAB10225.1| |
score: 93.6 |
e-value: 9e-18 |
Identity: 38.93% |
Span: 438bp (101.4%) |
Frame: 1 |
| retrovirus-related |
| Match: gi|111183162|gb|ABH07899.1| |
score: 92 |
e-value: 3e-17 |
Identity: 46.91% |
Span: 243bp (56.2%) |
Frame: 1 |
| putative polyprotein [Solanum lycopersicum] |
| Match: gi|9989054|gb|AAG10817.1| |
score: 92 |
e-value: 3e-17 |
Identity: 40.91% |
Span: 327bp (75.7%) |
Frame: 1 |
| gi|9989054|gb|AAG10817.1| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|48210027|gb|AAT40538.1| |
score: 91.3 |
e-value: 5e-17 |
Identity: 45.35% |
Span: 258bp (59.7%) |
Frame: 1 |
| gi|48210027|gb|AAT40538.1| hypothetical protein PGEC407.4 [Solanum demissum] |
| Match: gi|9954746|gb|AAG09097.1| |
score: 91.3 |
e-value: 4e-20 |
Identity: 44.33% |
Span: 285bp (66.0%) |
Frame: 1 |
| gi|9954746|gb|AAG09097.1| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|4572668|gb|AAD23883.1| |
score: 90.5 |
e-value: 2e-18 |
Identity: 49.45% |
Span: 270bp (62.5%) |
Frame: 1 |
| gi|4572668|gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|2462935|emb|CAA72989.1| |
score: 90.1 |
e-value: 1e-17 |
Identity: 51.22% |
Span: 243bp (56.2%) |
Frame: 1 |
| unnamed protein product [Brassica oleracea var. acephala] |
| Match: gi|53793721|gb|AAU93584.1| |
score: 90.1 |
e-value: 1e-19 |
Identity: 31.65% |
Span: 360bp (83.3%) |
Frame: 1 |
| putative |
| Match: gi|72384410|gb|AAZ67526.1| |
score: 89.7 |
e-value: 1e-16 |
Identity: 39.13% |
Span: 342bp (79.2%) |
Frame: 1 |
| gi|72384410|gb|AAZ67526.1| 4D11_12 [Brassica rapa subsp. pekinensis] |
| Match: gi|8778880|gb|AAF79879.1| |
score: 89 |
e-value: 2e-16 |
Identity: 37.04% |
Span: 375bp (86.8%) |
Frame: 1 |
| gi|8778880|gb|AAF79879.1| T7N9.5 [Arabidopsis thaliana] |
| Match: gi|7267379|emb|CAB77940.1| |
score: 89 |
e-value: 2e-17 |
Identity: 50.59% |
Span: 252bp (58.3%) |
Frame: 1 |
| gi|7267379|emb|CAB77940.1| putative polyprotein [Arabidopsis thaliana] >gi|4325355|gb|AAD17352.1| contains similarity... |
| Match: gi|5306246|gb|AAD41979.1| |
score: 88.6 |
e-value: 3e-16 |
Identity: 48.78% |
Span: 243bp (56.2%) |
Frame: 1 |
| gi|5306246|gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|66841324|dbj|BAD99220.1| |
score: 87.4 |
e-value: 1e-17 |
Identity: 52.5% |
Span: 237bp (54.9%) |
Frame: 1 |
| polypeptide with an integrase domain [Petunia x hybrida] |
| Match: gi|92873349|gb|ABE81813.1| |
score: 87 |
e-value: 7e-16 |
Identity: 50.6% |
Span: 246bp (56.9%) |
Frame: 1 |
| Integrase, |
| Match: gi|2642431|gb|AAB87099.1| |
score: 86.7 |
e-value: 1e-15 |
Identity: 39.32% |
Span: 333bp (77.1%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|9759493|dbj|BAB10743.1| |
score: 85.9 |
e-value: 2e-17 |
Identity: 45.05% |
Span: 270bp (62.5%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|12322504|gb|AAG51258.1| |
score: 85.9 |
e-value: 8e-18 |
Identity: 42.39% |
Span: 273bp (63.2%) |
Frame: 1 |
| gi|12322504|gb|AAG51258.1| Ty1/copia-element polyprotein [Arabidopsis thaliana] |
| Match: gi|48209880|gb|AAT40486.1| |
score: 85.5 |
e-value: 3e-15 |
Identity: 38.21% |
Span: 360bp (83.3%) |
Frame: 1 |
| putative polyprotein [Solanum demissum] |
| Match: gi|12321355|gb|AAG50751.1| |
score: 85.1 |
e-value: 4e-17 |
Identity: 47.13% |
Span: 258bp (59.7%) |
Frame: 1 |
| gi|12321355|gb|AAG50751.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|7269049|emb|CAB79159.1| |
score: 85.1 |
e-value: 4e-17 |
Identity: 45.05% |
Span: 270bp (62.5%) |
Frame: 1 |
| gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana] >gi|2961349|emb|CAA18107.1| LTR re... |
| Match: gi|12039328|gb|AAG46116.1| |
score: 84.7 |
e-value: 4e-15 |
Identity: 40.38% |
Span: 309bp (71.5%) |
Frame: 1 |
| gi|12039328|gb|AAG46116.1| putative copia-like retrotransposon polyprotein [Oryza sativa] |
| Match: gi|37536522|ref|NP_922563.1| |
score: 84.7 |
e-value: 4e-15 |
Identity: 40.38% |
Span: 309bp (71.5%) |
Frame: 1 |
| gi|37536522|ref|NP_922563.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|13310887|gb|AAG... |
| Match: gi|110289497|gb|ABB47941.2| |
score: 84.7 |
e-value: 4e-15 |
Identity: 40.38% |
Span: 309bp (71.5%) |
Frame: 1 |
| retrotransposon |
| Match: gi|4678197|gb|AAD26943.1| |
score: 84.3 |
e-value: 6e-15 |
Identity: 47.56% |
Span: 243bp (56.2%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|37530764|ref|NP_919684.1| |
score: 84.3 |
e-value: 6e-15 |
Identity: 40.78% |
Span: 306bp (70.8%) |
Frame: 1 |
| gi|37530764|ref|NP_919684.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|20042923|gb|... |
| Match: gi|8777581|dbj|BAA97099.1| |
score: 83.2 |
e-value: 1e-14 |
Identity: 39.84% |
Span: 351bp (81.2%) |
Frame: 1 |
| gi|8777581|dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|4586028|gb|AAD25646.1| |
score: 83.2 |
e-value: 1e-14 |
Identity: 37.5% |
Span: 357bp (82.6%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|92886481|gb|ABE88348.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 42.11% |
Span: 282bp (65.3%) |
Frame: 1 |
| Zinc |
| Match: gi|34910174|ref|NP_916434.1| |
score: 81.6 |
e-value: 4e-14 |
Identity: 44.58% |
Span: 246bp (56.9%) |
Frame: 1 |
| gi|34910174|ref|NP_916434.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|20160996|dbj|BA... |
| Match: gi|92888950|gb|ABE89622.1| |
score: 81.3 |
e-value: 5e-14 |
Identity: 35% |
Span: 333bp (77.1%) |
Frame: 1 |
| Integrase, |
| Match: gi|4581110|gb|AAD24600.1| |
score: 80.9 |
e-value: 7e-16 |
Identity: 45.45% |
Span: 273bp (63.2%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|92872326|gb|ABE80999.1| |
score: 79.7 |
e-value: 1e-15 |
Identity: 45.45% |
Span: 255bp (59.0%) |
Frame: 1 |
| Integrase, |
| Match: gi|92872938|gb|ABE81467.1| |
score: 79.7 |
e-value: 1e-13 |
Identity: 46.25% |
Span: 237bp (54.9%) |
Frame: 1 |
| Integrase, |
| Match: gi|3513747|gb|AAC33963.1| |
score: 79.7 |
e-value: 2e-15 |
Identity: 46.43% |
Span: 249bp (57.6%) |
Frame: 1 |
| gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis th... |
| Match: gi|7767664|gb|AAF69161.1| |
score: 79.7 |
e-value: 1e-13 |
Identity: 34.43% |
Span: 363bp (84.0%) |
Frame: 1 |
| gi|7767664|gb|AAF69161.1| F27F5.19 [Arabidopsis thaliana] |
| Match: gi|3650035|gb|AAC61290.1| |
score: 79.7 |
e-value: 1e-13 |
Identity: 36.67% |
Span: 357bp (82.6%) |
Frame: 1 |
| putative |
| Match: gi|92870292|gb|ABE79611.1| |
score: 79 |
e-value: 2e-13 |
Identity: 37.19% |
Span: 342bp (79.2%) |
Frame: 1 |
| Integrase, |
| Match: gi|4309765|gb|AAD15534.1| |
score: 78.2 |
e-value: 4e-13 |
Identity: 48.65% |
Span: 219bp (50.7%) |
Frame: 1 |
| gi|4309765|gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 77.8 |
e-value: 2e-16 |
Identity: 44.94% |
Span: 264bp (61.1%) |
Frame: 1 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|4388829|gb|AAD19784.1| |
score: 77.4 |
e-value: 4e-15 |
Identity: 31.47% |
Span: 426bp (98.6%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|553073|gb|AAA33448.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 36.36% |
Span: 327bp (75.7%) |
Frame: 1 |
| gi|553073|gb|AAA33448.1| reverse transcriptase |
| Match: gi|13876509|gb|AAK43485.1| |
score: 76.6 |
e-value: 9e-15 |
Identity: 36.7% |
Span: 324bp (75.0%) |
Frame: 1 |
| gi|13876509|gb|AAK43485.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|92898247|gb|ABE94113.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 41.44% |
Span: 327bp (75.7%) |
Frame: 1 |
| Polynucleotidyl |
| Match: gi|283051|pir||S27768 |
score: 76.6 |
e-value: 1e-12 |
Identity: 36.36% |
Span: 327bp (75.7%) |
Frame: 1 |
| gi|283051|pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon (fragment) |
| Match: gi|7523691|gb|AAF63130.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 41.94% |
Span: 276bp (63.9%) |
Frame: 1 |
| Hypothetical |
| Match: gi|49657699|emb|CAG90515.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 29.11% |
Span: 411bp (95.1%) |
Frame: 1 |
| unnamed |
| Match: gi|5302802|emb|CAB46043.1| |
score: 76.3 |
e-value: 4e-14 |
Identity: 40.38% |
Span: 285bp (66.0%) |
Frame: 1 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268438|emb|CAB80958.1| retrotransposon like protein [Arabidop... |
| Match: gi|92886086|gb|ABE88096.1| |
score: 75.5 |
e-value: 1e-12 |
Identity: 42.05% |
Span: 261bp (60.4%) |
Frame: 1 |
| Integrase, |
| Match: gi|92869834|gb|ABE79324.1| |
score: 75.1 |
e-value: 4e-13 |
Identity: 43.02% |
Span: 255bp (59.0%) |
Frame: 1 |
| conserved |
| Match: gi|33113978|gb|AAP94600.1| |
score: 75.1 |
e-value: 2e-13 |
Identity: 29.14% |
Span: 414bp (95.8%) |
Frame: 1 |
| gi|33113978|gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] |
| Match: gi|18254413|gb|AAL66754.1| |
score: 75.1 |
e-value: 2e-13 |
Identity: 29.14% |
Span: 414bp (95.8%) |
Frame: 1 |
| gi|18254413|gb|AAL66754.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] |
| Match: gi|71834719|gb|AAZ41811.1| |
score: 74.7 |
e-value: 1e-13 |
Identity: 40.91% |
Span: 261bp (60.4%) |
Frame: 1 |
| gi|71834719|gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis] |
| Match: gi|3779026|gb|AAC67205.1| |
score: 74.7 |
e-value: 2e-13 |
Identity: 40.22% |
Span: 273bp (63.2%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 74.7 |
e-value: 2e-13 |
Identity: 40.22% |
Span: 273bp (63.2%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|51038185|gb|AAT93988.1| |
score: 74.3 |
e-value: 6e-13 |
Identity: 35.78% |
Span: 324bp (75.0%) |
Frame: 1 |
| gi|51038185|gb|AAT93988.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|92894615|gb|ABE92313.1| |
score: 73.2 |
e-value: 1e-12 |
Identity: 30.34% |
Span: 429bp (99.3%) |
Frame: 1 |
| Integrase, |
| Match: gi|77548398|gb|ABA91195.1| |
score: 72.8 |
e-value: 2e-12 |
Identity: 34.34% |
Span: 294bp (68.1%) |
Frame: 1 |
| gi|77548398|gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa (japonica cultivar-gr... |
| Match: gi|92884350|gb|ABE87332.1| |
score: 71.6 |
e-value: 5e-13 |
Identity: 32.59% |
Span: 396bp (91.7%) |
Frame: 1 |
| Zinc |
| Match: gi|50928351|ref|XP_473703.1| |
score: 70.9 |
e-value: 1e-12 |
Identity: 43.24% |
Span: 222bp (51.4%) |
Frame: 1 |
| OSJNBb0016D16.22 |
| Match: gi|50924492|ref|XP_472606.1| |
score: 70.9 |
e-value: 1e-12 |
Identity: 43.24% |
Span: 222bp (51.4%) |
Frame: 1 |
| OJ000114_01.9 |
| Match: gi|22758275|gb|AAN05503.1| |
score: 70.9 |
e-value: 1e-12 |
Identity: 43.24% |
Span: 222bp (51.4%) |
Frame: 1 |
| gi|22758275|gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536916|ref|NP_922760.1| |
score: 70.9 |
e-value: 1e-12 |
Identity: 43.24% |
Span: 222bp (51.4%) |
Frame: 1 |
| gi|37536916|ref|NP_922760.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|12597892|gb|AAG... |
| Match: gi|9802525|gb|AAF99727.1| |
score: 70.5 |
e-value: 2e-12 |
Identity: 39.36% |
Span: 279bp (64.6%) |
Frame: 1 |
| gi|9802525|gb|AAF99727.1| F17L21.7 [Arabidopsis thaliana] |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 32 |
e-value: 2e-16 |
Identity: 82.35% |
Span: 51bp (11.8%) |
Frame: 2 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|9954746|gb|AAG09097.1| |
score: 30.8 |
e-value: 4e-20 |
Identity: 40.91% |
Span: 132bp (30.6%) |
Frame: 2 |
| gi|9954746|gb|AAG09097.1| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|53793721|gb|AAU93584.1| |
score: 30.4 |
e-value: 1e-19 |
Identity: 47.22% |
Span: 108bp (25.0%) |
Frame: 2 |
| putative |
| Match: gi|12322504|gb|AAG51258.1| |
score: 28.5 |
e-value: 8e-18 |
Identity: 75% |
Span: 48bp (11.1%) |
Frame: 2 |
| gi|12322504|gb|AAG51258.1| Ty1/copia-element polyprotein [Arabidopsis thaliana] |
| Match: gi|4388829|gb|AAD19784.1| |
score: 27.7 |
e-value: 4e-15 |
Identity: 68.75% |
Span: 48bp (11.1%) |
Frame: 2 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|2245104|emb|CAB10526.1| |
score: 27.3 |
e-value: 7e-20 |
Identity: 53.57% |
Span: 84bp (19.4%) |
Frame: 2 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268497|emb|CAB78748.1| retrotransposon like protein [Arabidop... |
| Match: gi|13876509|gb|AAK43485.1| |
score: 27.3 |
e-value: 9e-15 |
Identity: 85.71% |
Span: 42bp (9.7%) |
Frame: 2 |
| gi|13876509|gb|AAK43485.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|92872326|gb|ABE80999.1| |
score: 26.9 |
e-value: 1e-15 |
Identity: 42.86% |
Span: 105bp (24.3%) |
Frame: 2 |
| Integrase, |
| Match: gi|9759493|dbj|BAB10743.1| |
score: 26.9 |
e-value: 2e-17 |
Identity: 42.86% |
Span: 105bp (24.3%) |
Frame: 2 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|12321355|gb|AAG50751.1| |
score: 26.9 |
e-value: 4e-17 |
Identity: 42.86% |
Span: 105bp (24.3%) |
Frame: 2 |
| gi|12321355|gb|AAG50751.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|7269049|emb|CAB79159.1| |
score: 26.9 |
e-value: 4e-17 |
Identity: 42.86% |
Span: 105bp (24.3%) |
Frame: 2 |
| gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana] >gi|2961349|emb|CAA18107.1| LTR re... |
| Match: gi|4581110|gb|AAD24600.1| |
score: 26.9 |
e-value: 7e-16 |
Identity: 70.59% |
Span: 51bp (11.8%) |
Frame: 2 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|3513747|gb|AAC33963.1| |
score: 26.6 |
e-value: 2e-15 |
Identity: 42.86% |
Span: 84bp (19.4%) |
Frame: 2 |
| gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis th... |
| Match: gi|92884350|gb|ABE87332.1| |
score: 26.6 |
e-value: 5e-13 |
Identity: 66.67% |
Span: 45bp (10.4%) |
Frame: 2 |
| Zinc |
| Match: gi|66841324|dbj|BAD99220.1| |
score: 26.2 |
e-value: 1e-17 |
Identity: 68.75% |
Span: 48bp (11.1%) |
Frame: 2 |
| polypeptide with an integrase domain [Petunia x hybrida] |
| Match: gi|22758275|gb|AAN05503.1| |
score: 25.8 |
e-value: 1e-12 |
Identity: 62.5% |
Span: 48bp (11.1%) |
Frame: 2 |
| gi|22758275|gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536916|ref|NP_922760.1| |
score: 25.8 |
e-value: 1e-12 |
Identity: 62.5% |
Span: 48bp (11.1%) |
Frame: 2 |
| gi|37536916|ref|NP_922760.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|12597892|gb|AAG... |
| Match: gi|4572668|gb|AAD23883.1| |
score: 25.8 |
e-value: 2e-18 |
Identity: 68.75% |
Span: 48bp (11.1%) |
Frame: 2 |
| gi|4572668|gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|50924492|ref|XP_472606.1| |
score: 25.8 |
e-value: 1e-12 |
Identity: 62.5% |
Span: 48bp (11.1%) |
Frame: 2 |
| OJ000114_01.9 |
| Match: gi|50928351|ref|XP_473703.1| |
score: 25.8 |
e-value: 1e-12 |
Identity: 62.5% |
Span: 48bp (11.1%) |
Frame: 2 |
| OSJNBb0016D16.22 |
| Match: gi|5302802|emb|CAB46043.1| |
score: 25.4 |
e-value: 4e-14 |
Identity: 84.62% |
Span: 39bp (9.0%) |
Frame: 2 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268438|emb|CAB80958.1| retrotransposon like protein [Arabidop... |
| Match: gi|71834719|gb|AAZ41811.1| |
score: 25.4 |
e-value: 1e-13 |
Identity: 71.43% |
Span: 42bp (9.7%) |
Frame: 2 |
| gi|71834719|gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis] |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 25 |
e-value: 2e-13 |
Identity: 62.5% |
Span: 48bp (11.1%) |
Frame: 2 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|3779026|gb|AAC67205.1| |
score: 25 |
e-value: 2e-13 |
Identity: 62.5% |
Span: 48bp (11.1%) |
Frame: 2 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|2194136|gb|AAB61111.1| |
score: 24.6 |
e-value: 1e-20 |
Identity: 60% |
Span: 45bp (10.4%) |
Frame: 2 |
| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gbU12626) [Arabidopsis thaliana] |
| Match: gi|18254413|gb|AAL66754.1| |
score: 24.3 |
e-value: 2e-13 |
Identity: 76.92% |
Span: 39bp (9.0%) |
Frame: 2 |
| gi|18254413|gb|AAL66754.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] |
| Match: gi|33113978|gb|AAP94600.1| |
score: 24.3 |
e-value: 2e-13 |
Identity: 76.92% |
Span: 39bp (9.0%) |
Frame: 2 |
| gi|33113978|gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] |
| Match: gi|2462935|emb|CAA72989.1| |
score: 23.9 |
e-value: 1e-17 |
Identity: 39.29% |
Span: 84bp (19.4%) |
Frame: 2 |
| unnamed protein product [Brassica oleracea var. acephala] |
| Match: gi|7267379|emb|CAB77940.1| |
score: 23.9 |
e-value: 2e-17 |
Identity: 44.83% |
Span: 87bp (20.1%) |
Frame: 2 |
| gi|7267379|emb|CAB77940.1| putative polyprotein [Arabidopsis thaliana] >gi|4325355|gb|AAD17352.1| contains similarity... |
| Match: gi|77548398|gb|ABA91195.1| |
score: 23.5 |
e-value: 2e-12 |
Identity: 52.94% |
Span: 51bp (11.8%) |
Frame: 2 |
| gi|77548398|gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa (japonica cultivar-gr... |
| Match: gi|51038185|gb|AAT93988.1| |
score: 23.5 |
e-value: 6e-13 |
Identity: 52.94% |
Span: 51bp (11.8%) |
Frame: 2 |
| gi|51038185|gb|AAT93988.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|92894615|gb|ABE92313.1| |
score: 23.5 |
e-value: 1e-12 |
Identity: 60% |
Span: 45bp (10.4%) |
Frame: 2 |
| Integrase, |
| Match: gi|92869834|gb|ABE79324.1| |
score: 23.5 |
e-value: 4e-13 |
Identity: 46.43% |
Span: 84bp (19.4%) |
Frame: 2 |
| conserved |
| Match: gi|92886086|gb|ABE88096.1| |
score: 21.6 |
e-value: 1e-12 |
Identity: 66.67% |
Span: 36bp (8.3%) |
Frame: 2 |
| Integrase, |
| Match: gi|92873349|gb|ABE81813.1| |
score: 20.8 |
e-value: 7e-16 |
Identity: 37.93% |
Span: 87bp (20.1%) |
Frame: 2 |
| Integrase, |
|
| 244 lower scoring hits censored -- only 100 best hits are stored. |
