| arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
| Match: At5G51080.2 |
score: 92.8 |
e-value: 7e-23 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| nuclease | chr5:20786248-20787901 REVERSE |
| Match: At5G51080.1 |
score: 92.8 |
e-value: 7e-23 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| RNase H domain-containing protein | chr5:20786248-20787901 REVERSE |
| Match: At5G51080.3 |
score: 92.8 |
e-value: 7e-23 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| nuclease | chr5:20786248-20787712 REVERSE |
| Match: At1G24090.1 |
score: 85.1 |
e-value: 1e-20 |
Identity: 48.89% |
Span: 261bp (55.8%) |
Frame: 1 |
| RNase H domain-containing protein | chr1:8520823-8524679 FORWARD |
| Match: At3G01410.1 |
score: 77.4 |
e-value: 1e-14 |
Identity: 46.84% |
Span: 237bp (50.6%) |
Frame: 1 |
| RNase H domain-containing protein | chr3:153657-155446 REVERSE |
| Match: At1G24090.1 |
score: 32.7 |
e-value: 1e-20 |
Identity: 51.16% |
Span: 129bp (27.6%) |
Frame: 3 |
| RNase H domain-containing protein | chr1:8520823-8524679 FORWARD |
| Match: At5G51080.1 |
score: 32.7 |
e-value: 7e-23 |
Identity: 52.5% |
Span: 120bp (25.6%) |
Frame: 3 |
| RNase H domain-containing protein | chr5:20786248-20787901 REVERSE |
| Match: At5G51080.2 |
score: 32.7 |
e-value: 7e-23 |
Identity: 52.5% |
Span: 120bp (25.6%) |
Frame: 3 |
| nuclease | chr5:20786248-20787901 REVERSE |
| Match: At5G51080.3 |
score: 32.7 |
e-value: 7e-23 |
Identity: 52.5% |
Span: 120bp (25.6%) |
Frame: 3 |
| nuclease | chr5:20786248-20787712 REVERSE |
|
| 1 lower scoring hits censored -- only 9 best hits are stored. |
| genbank/nr [blastx] | Showing best 34 hits recorded |
| Match: gi|8843844|dbj|BAA97370.1| |
score: 92.8 |
e-value: 5e-21 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|79330550|ref|NP_001032054.1| |
score: 92.8 |
e-value: 5e-21 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| RNase H domain-containing protein [Arabidopsis thaliana] >gi222424272|dbj|BAH20093.1| AT5G51080 [Arabidopsis thaliana] |
| Match: gi|30695999|ref|NP_199921.2| |
score: 92.8 |
e-value: 5e-21 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| RNase H domain-containing protein [Arabidopsis thaliana] >gi79330542|ref|NP_001032053.1| RNase H domain-containing pr... |
| Match: gi|50941653|ref|XP_480354.1| |
score: 90.1 |
e-value: 1e-16 |
Identity: 50.57% |
Span: 261bp (55.8%) |
Frame: 1 |
| gi|50941653|ref|XP_480354.1| putative RNase H domain-containing protein [Oryza sativa (japonica cultivar-group)] >gi|... |
| Match: gi|78708782|gb|ABB47757.1| |
score: 89.4 |
e-value: 2e-16 |
Identity: 52.44% |
Span: 246bp (52.6%) |
Frame: 1 |
| gi|78708782|gb|ABB47757.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa (japonica cultivar-gr... |
| Match: gi|37535044|ref|NP_921824.1| |
score: 89.4 |
e-value: 2e-16 |
Identity: 52.44% |
Span: 246bp (52.6%) |
Frame: 1 |
| gi|37535044|ref|NP_921824.1| putative RNase [Oryza sativa (japonica cultivar-group)] gi|14140290|gb|AAK54296.1| putat... |
| Match: gi|15221666|ref|NP_173819.1| |
score: 85.1 |
e-value: 1e-18 |
Identity: 48.89% |
Span: 261bp (55.8%) |
Frame: 1 |
| RNase H domain-containing protein [Arabidopsis thaliana] |
| Match: gi|9369399|gb|AAF87147.1| |
score: 77.8 |
e-value: 3e-16 |
Identity: 40.37% |
Span: 261bp (55.8%) |
Frame: 1 |
| gi|9369399|gb|AAF87147.1| T23E23.24 [Arabidopsis thaliana] |
| Match: gi|6692261|gb|AAF24611.1| |
score: 77.4 |
e-value: 9e-13 |
Identity: 46.84% |
Span: 237bp (50.6%) |
Frame: 1 |
| gi|6692261|gb|AAF24611.1| putative RNase H [Arabidopsis thaliana] |
| Match: gi|51970934|dbj|BAD44159.1| |
score: 77.4 |
e-value: 9e-13 |
Identity: 46.84% |
Span: 237bp (50.6%) |
Frame: 1 |
| putative |
| Match: gi|30678332|ref|NP_186790.2| |
score: 77.4 |
e-value: 9e-13 |
Identity: 46.84% |
Span: 237bp (50.6%) |
Frame: 1 |
| RNase H domain-containing protein [Arabidopsis thaliana] >gi145331720|ref|NP_001078087.1| RNase H domain-containing p... |
| Match: gi|92892965|gb|ABE91479.1| |
score: 62.8 |
e-value: 2e-08 |
Identity: 60% |
Span: 135bp (28.8%) |
Frame: 1 |
| conserved |
| Match: gi|92892964|gb|ABE91478.1| |
score: 60.1 |
e-value: 2e-07 |
Identity: 64.44% |
Span: 135bp (28.8%) |
Frame: 1 |
| Ribonuclease |
| Match: gi|89343393|ref|ZP_01195614.1| |
score: 56.6 |
e-value: 2e-06 |
Identity: 40% |
Span: 210bp (44.9%) |
Frame: 1 |
| Phosphoglycerate/bisphosphoglycerate |
| Match: gi|90204713|ref|ZP_01207355.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 44.44% |
Span: 189bp (40.4%) |
Frame: 1 |
| Phosphoglycerate/bisphosphoglycerate |
| Match: gi|92915503|ref|ZP_01284126.1| |
score: 55.5 |
e-value: 4e-06 |
Identity: 37.14% |
Span: 210bp (44.9%) |
Frame: 1 |
| Phosphoglycerate/bisphosphoglycerate |
| Match: gi|108800308|ref|YP_640505.1| |
score: 55.5 |
e-value: 4e-06 |
Identity: 37.14% |
Span: 210bp (44.9%) |
Frame: 1 |
| Phosphoglycerate |
| Match: gi|111018194|ref|YP_701166.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 43.06% |
Span: 216bp (46.2%) |
Frame: 1 |
| probable |
| Match: gi|94967119|ref|YP_589167.1| |
score: 54.7 |
e-value: 7e-06 |
Identity: 36.71% |
Span: 237bp (50.6%) |
Frame: 1 |
| ribonuclease |
| Match: gi|23493975|dbj|BAC18943.1| |
score: 53.9 |
e-value: 1e-05 |
Identity: 35.29% |
Span: 255bp (54.5%) |
Frame: 1 |
| conserved |
| Match: gi|41326416|emb|CAF20578.1| |
score: 52.4 |
e-value: 3e-05 |
Identity: 44.07% |
Span: 177bp (37.8%) |
Frame: 1 |
| Ribonuclease |
| Match: gi|54015116|dbj|BAD56486.1| |
score: 52 |
e-value: 4e-05 |
Identity: 42.42% |
Span: 198bp (42.3%) |
Frame: 1 |
| putative |
| Match: gi|40538963|gb|AAR87220.1| |
score: 52 |
e-value: 4e-05 |
Identity: 33.33% |
Span: 243bp (51.9%) |
Frame: 1 |
| gi|40538963|gb|AAR87220.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|77551564|gb|ABA94361.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 32.89% |
Span: 228bp (48.7%) |
Frame: 1 |
| gi|77551564|gb|ABA94361.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa (japonica cultivar-gr... |
| Match: gi|78708485|gb|ABB47460.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 32.5% |
Span: 240bp (51.3%) |
Frame: 1 |
| gi|78708485|gb|ABB47460.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa (japonica cultivar-gr... |
| Match: gi|13881979|gb|AAK46573.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 40% |
Span: 210bp (44.9%) |
Frame: 1 |
| phosphoglycerate |
| Match: gi|108460761|gb|ABF85946.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 33.8% |
Span: 213bp (45.5%) |
Frame: 1 |
| ribonuclease |
| Match: gi|37530352|ref|NP_919478.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 29.67% |
Span: 270bp (57.7%) |
Frame: 1 |
| gi|37530352|ref|NP_919478.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|19551096|gb|AAL91... |
| Match: gi|37533868|ref|NP_921236.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 32.5% |
Span: 240bp (51.3%) |
Frame: 1 |
| gi|37533868|ref|NP_921236.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|13129430|gb|AAK13... |
| Match: gi|8843844|dbj|BAA97370.1| |
score: 32.7 |
e-value: 5e-21 |
Identity: 52.5% |
Span: 120bp (25.6%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|79330550|ref|NP_001032054.1| |
score: 32.7 |
e-value: 5e-21 |
Identity: 52.5% |
Span: 120bp (25.6%) |
Frame: 3 |
| RNase H domain-containing protein [Arabidopsis thaliana] >gi222424272|dbj|BAH20093.1| AT5G51080 [Arabidopsis thaliana] |
| Match: gi|15221666|ref|NP_173819.1| |
score: 32.7 |
e-value: 1e-18 |
Identity: 51.16% |
Span: 129bp (27.6%) |
Frame: 3 |
| RNase H domain-containing protein [Arabidopsis thaliana] |
| Match: gi|30695999|ref|NP_199921.2| |
score: 32.7 |
e-value: 5e-21 |
Identity: 52.5% |
Span: 120bp (25.6%) |
Frame: 3 |
| RNase H domain-containing protein [Arabidopsis thaliana] >gi79330542|ref|NP_001032053.1| RNase H domain-containing pr... |
| Match: gi|9369399|gb|AAF87147.1| |
score: 31.6 |
e-value: 3e-16 |
Identity: 55.26% |
Span: 114bp (24.4%) |
Frame: 3 |
| gi|9369399|gb|AAF87147.1| T23E23.24 [Arabidopsis thaliana] |
|
| 210 lower scoring hits censored -- only 34 best hits are stored. |
