| genbank/nr [blastx] | Showing best 21 hits recorded |
| Match: gi|15233167|ref|NP_191721.1| |
score: 92.05 |
e-value: 3.2e-18 |
Identity: 70.77% |
Span: 195bp (40.6%) |
Frame: 1 |
| RRP41; 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] >gi186511299|ref|NP_001118878.1| RRP41; 3'-5'-exorib... |
| Match: gi|14520826|ref|NP_126301.1| |
score: 47.37 |
e-value: 9.1e-05 |
Identity: 48.15% |
Span: 162bp (33.8%) |
Frame: 1 |
| gi|14520826|ref|NP_126301.1| ribonuclease PH [Pyrococcus abyssi] gi|29337010|sp|Q9V119|ECX1_PYRAB Probable exosome co... |
| Match: gi|15678710|ref|NP_275826.1| |
score: 47.37 |
e-value: 9.1e-05 |
Identity: 46.15% |
Span: 156bp (32.5%) |
Frame: 1 |
| gi|15678710|ref|NP_275826.1| ribonuclease PH [Methanothermobacter thermautotrophicus] gi|29336573|sp|O26779|ECX1_METT... |
| Match: gi|14591333|ref|NP_143411.1| |
score: 45.82 |
e-value: 0.00026 |
Identity: 46.3% |
Span: 162bp (33.8%) |
Frame: 1 |
| gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyrococcus horikoshii] gi|29336584|sp|O59223|ECX1_PYRHO Pro... |
| Match: gi|18977940|ref|NP_579297.1| |
score: 45.44 |
e-value: 0.00034 |
Identity: 46.3% |
Span: 162bp (33.8%) |
Frame: 1 |
| gi|18977940|ref|NP_579297.1| ribonuclease ph [Pyrococcus furiosus DSM 3638] gi|29336822|sp|Q8U0L9|ECX1_PYRFU Probable... |
| Match: gi|20093819|ref|NP_613666.1| |
score: 45.05 |
e-value: 0.00045 |
Identity: 42.59% |
Span: 162bp (33.8%) |
Frame: 1 |
| gi|20093819|ref|NP_613666.1| Predicted exosome subunit, RNase PH [Methanopyrus kandleri AV19] gi|29336819|sp|Q8TYC1|E... |
| Match: gi|1945337|emb|CAA97223.1| |
score: 41.59 |
e-value: 0.005 |
Identity: 35.71% |
Span: 168bp (35.0%) |
Frame: 1 |
| gi|1945337|emb|CAA97223.1| unnamed protein product [Saccharomyces cerevisiae] |
| Match: gi|37747963|gb|AAH59525.1| |
score: 41.59 |
e-value: 0.005 |
Identity: 32.79% |
Span: 159bp (33.1%) |
Frame: 1 |
| gi|37747963|gb|AAH59525.1| Putative exosome complex exonuclease RRP41 [Danio rerio] |
| Match: gi|31240059|ref|XP_320443.1| |
score: 41.59 |
e-value: 0.005 |
Identity: 27.54% |
Span: 207bp (43.1%) |
Frame: 1 |
| gi|31240059|ref|XP_320443.1| ENSANGP00000017010 [Anopheles gambiae] gi|31240071|ref|XP_320449.1| ENSANGP00000009222 [... |
| Match: gi|6321634|ref|NP_011711.1| |
score: 41.59 |
e-value: 0.005 |
Identity: 35.71% |
Span: 168bp (35.0%) |
Frame: 1 |
| gi|6321634|ref|NP_011711.1| superkiller; ExtraCellular Mutant; Ribosomal RNA Processing; Ski6p [Saccharomyces cerevis... |
| Match: gi|23484066|gb|EAA19527.1| |
score: 40.82 |
e-value: 0.008 |
Identity: 31.03% |
Span: 174bp (36.2%) |
Frame: 1 |
| gi|23484066|gb|EAA19527.1| exonuclease RRP41, putative [Plasmodium yoelii yoelii] |
| Match: gi|24584046|ref|NP_609618.2| |
score: 39.66 |
e-value: 0.019 |
Identity: 32.76% |
Span: 162bp (33.8%) |
Frame: 1 |
| gi|24584046|ref|NP_609618.2| CG15481-PA [Drosophila melanogaster] gi|7298022|gb|AAF53263.1| CG15481-PA [Drosophila me... |
| Match: gi|18313178|ref|NP_559845.1| |
score: 39.28 |
e-value: 0.025 |
Identity: 33.33% |
Span: 198bp (41.2%) |
Frame: 1 |
| gi|18313178|ref|NP_559845.1| 3' exoribonuclease family protein [Pyrobaculum aerophilum] gi|29336868|sp|Q8ZVM9|ECX1_PY... |
| Match: gi|34866849|ref|XP_216949.2| |
score: 39.28 |
e-value: 0.025 |
Identity: 27.27% |
Span: 198bp (41.2%) |
Frame: 1 |
| gi|34866849|ref|XP_216949.2| similar to putative exosome complex exonuclease RRP41 [Rattus norvegicus] |
| Match: gi|33411774|emb|CAD58792.1| |
score: 38.89 |
e-value: 0.032 |
Identity: 27.27% |
Span: 198bp (41.2%) |
Frame: 1 |
| gi|33411774|emb|CAD58792.1| putative exosome complex exonuclease RRP41 [Bos taurus] |
| Match: gi|9506689|ref|NP_061910.1| |
score: 38.89 |
e-value: 0.032 |
Identity: 27.27% |
Span: 198bp (41.2%) |
Frame: 1 |
| gi|9506689|ref|NP_061910.1| exosome complex exonuclease RRP41; exosome component Rrp41; ribosomal RNA-processing prot... |
| Match: gi|29611663|ref|NP_780608.1| |
score: 38.89 |
e-value: 0.032 |
Identity: 25.76% |
Span: 198bp (41.2%) |
Frame: 1 |
| gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [Mus musculus] gi|21759405|sp|Q921I9|RR41_MOUSE Exosom... |
| Match: gi|23509478|ref|NP_702145.1| |
score: 38.51 |
e-value: 0.042 |
Identity: 27.42% |
Span: 186bp (38.8%) |
Frame: 1 |
| gi|23509478|ref|NP_702145.1| exosome complex exonuclease rrp41, putative [Plasmodium falciparum 3D7] gi|23497324|gb|A... |
| Match: gi|15897636|ref|NP_342241.1| |
score: 38.51 |
e-value: 0.042 |
Identity: 34.62% |
Span: 156bp (32.5%) |
Frame: 1 |
| gi|15897636|ref|NP_342241.1| Ribonuclease PH (rph) [Sulfolobus solfataricus] gi|29337007|sp|Q9UXC2|ECX1_SULSO Probabl... |
| Match: gi|16082286|ref|NP_394747.1| |
score: 38.12 |
e-value: 0.055 |
Identity: 31.25% |
Span: 192bp (40.0%) |
Frame: 1 |
| gi|16082286|ref|NP_394747.1| RNase PH (yeast SIK6) related protein [Thermoplasma acidophilum] gi|29336949|sp|Q9HIP2|E... |
| Match: gi|13541138|ref|NP_110826.1| |
score: 37.35 |
e-value: 0.094 |
Identity: 33.96% |
Span: 159bp (33.1%) |
Frame: 1 |
| gi|13541138|ref|NP_110826.1| RNase PH [Thermoplasma volcanium] gi|29336899|sp|Q97BZ5|ECX1_THEVO Probable exosome comp... |
|
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At3g61620.1 |
score: 92.05 |
e-value: 1.4e-19 |
Identity: 70.77% |
Span: 195bp (40.6%) |
Frame: 1 |
| At3g61620.1 68410.m06380 exonuclease RRP41 |
|
