| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|37535012|ref|NP_921808.1| |
score: 229.2 |
e-value: 1.9e-59 |
Identity: 81.16% |
Span: 393bp (78.9%) |
Frame: 1 |
| gi|37535012|ref|NP_921808.1| putative spliceosomal protein [Oryza sativa (japonica cultivar-group)] gi|31432465|gb|AA... |
| Match: gi|21593441|gb|AAM65408.1| |
score: 226.5 |
e-value: 1.2e-58 |
Identity: 83.72% |
Span: 387bp (77.7%) |
Frame: 1 |
| putative spliceosome associated protein [Arabidopsis thaliana] |
| Match: gi|15224186|ref|NP_179441.1| |
score: 226.5 |
e-value: 1.2e-58 |
Identity: 83.72% |
Span: 387bp (77.7%) |
Frame: 1 |
| emb2444 (embryo defective 2444); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi42... |
| Match: gi|14334958|gb|AAK59656.1| |
score: 226.5 |
e-value: 1.2e-58 |
Identity: 83.72% |
Span: 387bp (77.7%) |
Frame: 1 |
| putative spliceosome associated protein [Arabidopsis thaliana] |
| Match: gi|22325678|ref|NP_179061.2| |
score: 201.1 |
e-value: 5.4e-51 |
Identity: 75.97% |
Span: 387bp (77.7%) |
Frame: 1 |
| gi|22325678|ref|NP_179061.2| pre-mRNA splicing factor SF3b, putative [Arabidopsis thaliana] |
| Match: gi|24119253|ref|NP_705947.1| |
score: 197.6 |
e-value: 6e-50 |
Identity: 69.17% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|24119253|ref|NP_705947.1| splicing factor 3b, subunit 4 [Danio rerio] gi|20977551|gb|AAM28203.1| splicing factor 3... |
| Match: gi|34193906|gb|AAH56532.1| |
score: 197.6 |
e-value: 6e-50 |
Identity: 69.17% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio] |
| Match: gi|28374170|gb|AAH45264.1| |
score: 197.2 |
e-value: 7.8e-50 |
Identity: 74.79% |
Span: 357bp (71.7%) |
Frame: 1 |
| gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis] |
| Match: gi|23346437|ref|NP_694693.1| |
score: 196.4 |
e-value: 1.3e-49 |
Identity: 67.67% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|23346437|ref|NP_694693.1| splicing factor 3b, subunit 4; splicing factor 3b, subunit 4, 49kD; spliceosome associat... |
| Match: gi|34858075|ref|XP_238245.2| |
score: 196.4 |
e-value: 1.3e-49 |
Identity: 67.67% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|34858075|ref|XP_238245.2| similar to Sf3b4 protein [Rattus norvegicus] |
| Match: gi|5032069|ref|NP_005841.1| |
score: 196.4 |
e-value: 1.3e-49 |
Identity: 67.67% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|5032069|ref|NP_005841.1| splicing factor 3b, subunit 4; spliceosome-associated protein (U2 snRNP); spliceosomal pr... |
| Match: gi|25411571|pir||E84518 |
score: 194.5 |
e-value: 5.1e-49 |
Identity: 74.62% |
Span: 387bp (77.7%) |
Frame: 1 |
| gi|25411571|pir||E84518 probable spliceosome associated protein [imported] - Arabidopsis thaliana gi|4263832|gb|AAD15... |
| Match: gi|31242307|ref|XP_321584.1| |
score: 184.5 |
e-value: 5.3e-46 |
Identity: 71.19% |
Span: 354bp (71.1%) |
Frame: 1 |
| gi|31242307|ref|XP_321584.1| ENSANGP00000011587 [Anopheles gambiae] gi|21288546|gb|EAA00839.1| ENSANGP00000011587 [An... |
| Match: gi|17530817|ref|NP_511058.1| |
score: 184.1 |
e-value: 6.9e-46 |
Identity: 65.41% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|17530817|ref|NP_511058.1| Spliceosomal protein on the X CG3780-PA [Drosophila melanogaster] gi|7290689|gb|AAF46136... |
| Match: gi|1279382|emb|CAA65831.1| |
score: 184.1 |
e-value: 6.9e-46 |
Identity: 65.41% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster] |
| Match: gi|1002380|gb|AAC47514.1| |
score: 178.3 |
e-value: 3.8e-44 |
Identity: 62.32% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein |
| Match: gi|6434257|emb|CAB60993.1| |
score: 178.3 |
e-value: 3.8e-44 |
Identity: 62.32% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|6434257|emb|CAB60993.1| C. elegans SAP-49 protein (corresponding sequence C08B11.5) [Caenorhabditis elegans] |
| Match: gi|1176668|sp|Q09442|YP85_CAEEL |
score: 178.3 |
e-value: 3.8e-44 |
Identity: 62.32% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|1176668|sp|Q09442|YP85_CAEEL Hypothetical RNA-binding protein C08B11.5 in chromosome II gi|7495645|pir||T19069 hyp... |
| Match: gi|7446344|pir||JC5437 |
score: 174.1 |
e-value: 7.1e-43 |
Identity: 60.87% |
Span: 399bp (80.1%) |
Frame: 1 |
| gi|7446344|pir||JC5437 spliceosome-associated protein 49 - Caenorhabditis elegans |
| Match: gi|26399889|sp|O14102|SP49_SCHPO |
score: 139 |
e-value: 2.5e-32 |
Identity: 50% |
Span: 381bp (76.5%) |
Frame: 1 |
| gi|26399889|sp|O14102|SP49_SCHPO Spliceosome-associated protein 49 |
| Match: gi|32405818|ref|XP_323522.1| |
score: 131.7 |
e-value: 4e-30 |
Identity: 63% |
Span: 300bp (60.2%) |
Frame: 1 |
| gi|32405818|ref|XP_323522.1| hypothetical protein [Neurospora crassa] gi|11595719|emb|CAC18197.1| probable spliceosom... |
| Match: gi|38103529|gb|EAA50214.1| |
score: 130.6 |
e-value: 9e-30 |
Identity: 62% |
Span: 300bp (60.2%) |
Frame: 1 |
| gi|38103529|gb|EAA50214.1| hypothetical protein MG03973.4 [Magnaporthe grisea 70-15] |
| Match: gi|23509415|ref|NP_702082.1| |
score: 129.4 |
e-value: 2e-29 |
Identity: 59.41% |
Span: 303bp (60.8%) |
Frame: 1 |
| gi|23509415|ref|NP_702082.1| spliceosome-associated protein, putative [Plasmodium falciparum 3D7] gi|23497260|gb|AAN3... |
| Match: gi|23485610|gb|EAA20492.1| |
score: 127.5 |
e-value: 7.6e-29 |
Identity: 58.25% |
Span: 309bp (62.0%) |
Frame: 1 |
| gi|23485610|gb|EAA20492.1| splicing factor 3b subunit 4 [Plasmodium yoelii yoelii] |
| Match: gi|7522539|pir||T38618 |
score: 120.2 |
e-value: 1.2e-26 |
Identity: 47.14% |
Span: 351bp (70.5%) |
Frame: 1 |
| gi|7522539|pir||T38618 probable splicosome associated RNA binding protein - fission yeast (Schizosaccharomyces pombe)... |
| Match: gi|32399025|emb|CAD98265.1| |
score: 109.4 |
e-value: 2.1e-23 |
Identity: 48.04% |
Span: 306bp (61.4%) |
Frame: 1 |
| gi|32399025|emb|CAD98265.1| splicing factor, probable [Cryptosporidium parvum] |
| Match: gi|7270986|emb|CAB77630.1| |
score: 103.6 |
e-value: 1.2e-21 |
Identity: 51.92% |
Span: 303bp (60.8%) |
Frame: 1 |
| gi|7270986|emb|CAB77630.1| spliceosome-associated essential protein [Candida albicans] |
| Match: gi|15221031|ref|NP_175810.1| |
score: 80.11 |
e-value: 1.4e-14 |
Identity: 39.25% |
Span: 318bp (63.9%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U5... |
| Match: gi|30695647|ref|NP_849806.1| |
score: 78.57 |
e-value: 4.1e-14 |
Identity: 38.18% |
Span: 318bp (63.9%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|10801574|dbj|BAB16700.1| |
score: 74.71 |
e-value: 5.9e-13 |
Identity: 38.3% |
Span: 279bp (56.0%) |
Frame: 1 |
| gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori] |
| Match: gi|38141765|dbj|BAD00701.1| |
score: 74.71 |
e-value: 5.9e-13 |
Identity: 38.3% |
Span: 279bp (56.0%) |
Frame: 1 |
| gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori] |
| Match: gi|15231783|ref|NP_188026.1| |
score: 74.71 |
e-value: 5.9e-13 |
Identity: 43.53% |
Span: 255bp (51.2%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi9294635|dbj|BAB02974.1| RNA binding protein nucleo... |
| Match: gi|21593280|gb|AAM65229.1| |
score: 74.71 |
e-value: 5.9e-13 |
Identity: 43.53% |
Span: 255bp (51.2%) |
Frame: 1 |
| oligouridylate binding protein, putative [Arabidopsis thaliana] |
| Match: gi|480602|pir||S37085 |
score: 73.17 |
e-value: 1.7e-12 |
Identity: 39.29% |
Span: 252bp (50.6%) |
Frame: 1 |
| gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anemia phyllitidis) gi|398327|emb|CAA81127.1| poly(A)-mRN... |
| Match: gi|173421|gb|AAA35320.1| |
score: 73.17 |
e-value: 1.7e-12 |
Identity: 46.05% |
Span: 228bp (45.8%) |
Frame: 1 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|19114289|ref|NP_593377.1| |
score: 73.17 |
e-value: 1.7e-12 |
Identity: 46.05% |
Span: 228bp (45.8%) |
Frame: 1 |
| gi|19114289|ref|NP_593377.1| polyadenylate-binding protein [Schizosaccharomyces pombe] gi|3123239|sp|P31209|PABP_SCHP... |
| Match: gi|15822705|gb|AAL07519.1| |
score: 72.79 |
e-value: 2.2e-12 |
Identity: 45.88% |
Span: 255bp (51.2%) |
Frame: 1 |
| RNA-binding protein precursor [Solanum tuberosum] |
| Match: gi|18402769|ref|NP_564554.1| |
score: 72.4 |
e-value: 2.9e-12 |
Identity: 40.45% |
Span: 258bp (51.8%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|9930616|gb|AAG02117.1| |
score: 71.63 |
e-value: 5e-12 |
Identity: 34.41% |
Span: 279bp (56.0%) |
Frame: 1 |
| gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|6321013|ref|NP_011092.1| |
score: 71.63 |
e-value: 5e-12 |
Identity: 48% |
Span: 225bp (45.2%) |
Frame: 1 |
| gi|6321013|ref|NP_011092.1| Poly(A) binding protein, cytoplasmic and nuclear; Pab1p [Saccharomyces cerevisiae] gi|417... |
| Match: gi|23237933|dbj|BAC16506.1| |
score: 71.63 |
e-value: 5e-12 |
Identity: 35.92% |
Span: 309bp (62.0%) |
Frame: 1 |
| gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|172092|gb|AAA34838.1| |
score: 71.63 |
e-value: 5e-12 |
Identity: 48% |
Span: 225bp (45.2%) |
Frame: 1 |
| gi|172092|gb|AAA34838.1| polyadenylate-binding protein |
| Match: gi|7439965|pir||T00768 |
score: 71.63 |
e-value: 5e-12 |
Identity: 34.41% |
Span: 279bp (56.0%) |
Frame: 1 |
| gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - Arabidopsis thaliana gi|3287682|gb|AAC25510.1| Strong... |
| Match: gi|15219945|ref|NP_173690.1| |
score: 71.63 |
e-value: 5e-12 |
Identity: 34.41% |
Span: 279bp (56.0%) |
Frame: 1 |
| gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PABP3) [Arabidopsis thaliana] gi|12643628|sp|O64380|PAB... |
| Match: gi|7439967|pir||T06979 |
score: 70.48 |
e-value: 1.1e-11 |
Identity: 39.33% |
Span: 267bp (53.6%) |
Frame: 1 |
| gi|7439967|pir||T06979 polyadenylate-binding protein - wheat gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triti... |
| Match: gi|18394471|ref|NP_564018.1| |
score: 70.09 |
e-value: 1.4e-11 |
Identity: 32.17% |
Span: 345bp (69.3%) |
Frame: 1 |
| UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding [Arabidopsis thaliana] >gi9665134|gb|AAF97318.1|AC0078... |
| Match: gi|27690704|ref|XP_227127.1| |
score: 70.09 |
e-value: 1.4e-11 |
Identity: 41.94% |
Span: 276bp (55.4%) |
Frame: 1 |
| gi|27690704|ref|XP_227127.1| similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducib... |
| Match: gi|19114289|ref|NP_593377.1| |
score: 64.31 |
e-value: 7.9e-10 |
Identity: 40% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|19114289|ref|NP_593377.1| polyadenylate-binding protein [Schizosaccharomyces pombe] gi|3123239|sp|P31209|PABP_SCHP... |
| Match: gi|173421|gb|AAA35320.1| |
score: 64.31 |
e-value: 7.9e-10 |
Identity: 40% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|9930616|gb|AAG02117.1| |
score: 63.54 |
e-value: 1.4e-09 |
Identity: 33.33% |
Span: 387bp (77.7%) |
Frame: 1 |
| gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|15219945|ref|NP_173690.1| |
score: 63.54 |
e-value: 1.4e-09 |
Identity: 33.33% |
Span: 387bp (77.7%) |
Frame: 1 |
| gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PABP3) [Arabidopsis thaliana] gi|12643628|sp|O64380|PAB... |
| Match: gi|7439965|pir||T00768 |
score: 63.16 |
e-value: 1.8e-09 |
Identity: 37.65% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - Arabidopsis thaliana gi|3287682|gb|AAC25510.1| Strong... |
| Match: gi|18402769|ref|NP_564554.1| |
score: 62.39 |
e-value: 3e-09 |
Identity: 32.2% |
Span: 354bp (71.1%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|480602|pir||S37085 |
score: 61.23 |
e-value: 6.7e-09 |
Identity: 28.81% |
Span: 351bp (70.5%) |
Frame: 1 |
| gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anemia phyllitidis) gi|398327|emb|CAA81127.1| poly(A)-mRN... |
| Match: gi|172092|gb|AAA34838.1| |
score: 61.23 |
e-value: 6.7e-09 |
Identity: 37.65% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|172092|gb|AAA34838.1| polyadenylate-binding protein |
| Match: gi|6321013|ref|NP_011092.1| |
score: 61.23 |
e-value: 6.7e-09 |
Identity: 37.65% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|6321013|ref|NP_011092.1| Poly(A) binding protein, cytoplasmic and nuclear; Pab1p [Saccharomyces cerevisiae] gi|417... |
| Match: gi|7439965|pir||T00768 |
score: 59.69 |
e-value: 2e-08 |
Identity: 40% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - Arabidopsis thaliana gi|3287682|gb|AAC25510.1| Strong... |
| Match: gi|15219945|ref|NP_173690.1| |
score: 59.69 |
e-value: 2e-08 |
Identity: 40% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PABP3) [Arabidopsis thaliana] gi|12643628|sp|O64380|PAB... |
| Match: gi|9930616|gb|AAG02117.1| |
score: 59.69 |
e-value: 2e-08 |
Identity: 40% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|7439967|pir||T06979 |
score: 59.31 |
e-value: 2.5e-08 |
Identity: 37.21% |
Span: 258bp (51.8%) |
Frame: 1 |
| gi|7439967|pir||T06979 polyadenylate-binding protein - wheat gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triti... |
| Match: gi|480602|pir||S37085 |
score: 56.61 |
e-value: 1.7e-07 |
Identity: 34.15% |
Span: 246bp (49.4%) |
Frame: 1 |
| gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anemia phyllitidis) gi|398327|emb|CAA81127.1| poly(A)-mRN... |
| Match: gi|18402769|ref|NP_564554.1| |
score: 53.53 |
e-value: 1.4e-06 |
Identity: 36.14% |
Span: 249bp (50.0%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|172092|gb|AAA34838.1| |
score: 51.6 |
e-value: 5.3e-06 |
Identity: 40.62% |
Span: 192bp (38.6%) |
Frame: 1 |
| gi|172092|gb|AAA34838.1| polyadenylate-binding protein |
| Match: gi|37535012|ref|NP_921808.1| |
score: 51.6 |
e-value: 5.3e-06 |
Identity: 38.46% |
Span: 234bp (47.0%) |
Frame: 1 |
| gi|37535012|ref|NP_921808.1| putative spliceosomal protein [Oryza sativa (japonica cultivar-group)] gi|31432465|gb|AA... |
| Match: gi|6321013|ref|NP_011092.1| |
score: 51.6 |
e-value: 5.3e-06 |
Identity: 40.62% |
Span: 192bp (38.6%) |
Frame: 1 |
| gi|6321013|ref|NP_011092.1| Poly(A) binding protein, cytoplasmic and nuclear; Pab1p [Saccharomyces cerevisiae] gi|417... |
| Match: gi|19114289|ref|NP_593377.1| |
score: 50.06 |
e-value: 1.5e-05 |
Identity: 24.56% |
Span: 342bp (68.7%) |
Frame: 1 |
| gi|19114289|ref|NP_593377.1| polyadenylate-binding protein [Schizosaccharomyces pombe] gi|3123239|sp|P31209|PABP_SCHP... |
| Match: gi|173421|gb|AAA35320.1| |
score: 50.06 |
e-value: 1.5e-05 |
Identity: 24.56% |
Span: 342bp (68.7%) |
Frame: 1 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|6321013|ref|NP_011092.1| |
score: 48.91 |
e-value: 3.4e-05 |
Identity: 30.12% |
Span: 249bp (50.0%) |
Frame: 1 |
| gi|6321013|ref|NP_011092.1| Poly(A) binding protein, cytoplasmic and nuclear; Pab1p [Saccharomyces cerevisiae] gi|417... |
| Match: gi|32399025|emb|CAD98265.1| |
score: 48.91 |
e-value: 3.4e-05 |
Identity: 41.1% |
Span: 219bp (44.0%) |
Frame: 1 |
| gi|32399025|emb|CAD98265.1| splicing factor, probable [Cryptosporidium parvum] |
| Match: gi|172092|gb|AAA34838.1| |
score: 48.91 |
e-value: 3.4e-05 |
Identity: 30.12% |
Span: 249bp (50.0%) |
Frame: 1 |
| gi|172092|gb|AAA34838.1| polyadenylate-binding protein |
| Match: gi|19114289|ref|NP_593377.1| |
score: 48.14 |
e-value: 5.9e-05 |
Identity: 28.24% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|19114289|ref|NP_593377.1| polyadenylate-binding protein [Schizosaccharomyces pombe] gi|3123239|sp|P31209|PABP_SCHP... |
| Match: gi|173421|gb|AAA35320.1| |
score: 48.14 |
e-value: 5.9e-05 |
Identity: 28.24% |
Span: 255bp (51.2%) |
Frame: 1 |
| gi|173421|gb|AAA35320.1| poly(A)-binding protein |
| Match: gi|18402769|ref|NP_564554.1| |
score: 47.75 |
e-value: 7.7e-05 |
Identity: 32.91% |
Span: 237bp (47.6%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|21593280|gb|AAM65229.1| |
score: 47.75 |
e-value: 7.7e-05 |
Identity: 36.47% |
Span: 249bp (50.0%) |
Frame: 1 |
| oligouridylate binding protein, putative [Arabidopsis thaliana] |
| Match: gi|15231783|ref|NP_188026.1| |
score: 47.75 |
e-value: 7.7e-05 |
Identity: 36.47% |
Span: 249bp (50.0%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi9294635|dbj|BAB02974.1| RNA binding protein nucleo... |
| Match: gi|15221031|ref|NP_175810.1| |
score: 47.37 |
e-value: 0.0001 |
Identity: 34.12% |
Span: 249bp (50.0%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U5... |
| Match: gi|30695647|ref|NP_849806.1| |
score: 47.37 |
e-value: 0.0001 |
Identity: 34.12% |
Span: 249bp (50.0%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|480602|pir||S37085 |
score: 46.59 |
e-value: 0.00017 |
Identity: 31.33% |
Span: 249bp (50.0%) |
Frame: 1 |
| gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anemia phyllitidis) gi|398327|emb|CAA81127.1| poly(A)-mRN... |
| Match: gi|7439967|pir||T06979 |
score: 46.59 |
e-value: 0.00017 |
Identity: 32.53% |
Span: 249bp (50.0%) |
Frame: 1 |
| gi|7439967|pir||T06979 polyadenylate-binding protein - wheat gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triti... |
| Match: gi|7439967|pir||T06979 |
score: 46.21 |
e-value: 0.00022 |
Identity: 30.34% |
Span: 267bp (53.6%) |
Frame: 1 |
| gi|7439967|pir||T06979 polyadenylate-binding protein - wheat gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triti... |
| Match: gi|21593280|gb|AAM65229.1| |
score: 46.21 |
e-value: 0.00022 |
Identity: 31.46% |
Span: 267bp (53.6%) |
Frame: 1 |
| oligouridylate binding protein, putative [Arabidopsis thaliana] |
| Match: gi|15231783|ref|NP_188026.1| |
score: 46.21 |
e-value: 0.00022 |
Identity: 31.46% |
Span: 267bp (53.6%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi9294635|dbj|BAB02974.1| RNA binding protein nucleo... |
| Match: gi|1002380|gb|AAC47514.1| |
score: 45.44 |
e-value: 0.00038 |
Identity: 34.62% |
Span: 234bp (47.0%) |
Frame: 1 |
| gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein |
| Match: gi|6434257|emb|CAB60993.1| |
score: 45.44 |
e-value: 0.00038 |
Identity: 34.62% |
Span: 234bp (47.0%) |
Frame: 1 |
| gi|6434257|emb|CAB60993.1| C. elegans SAP-49 protein (corresponding sequence C08B11.5) [Caenorhabditis elegans] |
| Match: gi|38103529|gb|EAA50214.1| |
score: 45.44 |
e-value: 0.00038 |
Identity: 32.05% |
Span: 234bp (47.0%) |
Frame: 1 |
| gi|38103529|gb|EAA50214.1| hypothetical protein MG03973.4 [Magnaporthe grisea 70-15] |
| Match: gi|7446344|pir||JC5437 |
score: 45.44 |
e-value: 0.00038 |
Identity: 34.62% |
Span: 234bp (47.0%) |
Frame: 1 |
| gi|7446344|pir||JC5437 spliceosome-associated protein 49 - Caenorhabditis elegans |
| Match: gi|1176668|sp|Q09442|YP85_CAEEL |
score: 45.44 |
e-value: 0.00038 |
Identity: 34.62% |
Span: 234bp (47.0%) |
Frame: 1 |
| gi|1176668|sp|Q09442|YP85_CAEEL Hypothetical RNA-binding protein C08B11.5 in chromosome II gi|7495645|pir||T19069 hyp... |
| Match: gi|10801574|dbj|BAB16700.1| |
score: 44.67 |
e-value: 0.00065 |
Identity: 33.7% |
Span: 258bp (51.8%) |
Frame: 1 |
| gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori] |
| Match: gi|38141765|dbj|BAD00701.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 33.7% |
Span: 258bp (51.8%) |
Frame: 1 |
| gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori] |
| Match: gi|18394471|ref|NP_564018.1| |
score: 43.13 |
e-value: 0.002 |
Identity: 30.34% |
Span: 267bp (53.6%) |
Frame: 1 |
| UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding [Arabidopsis thaliana] >gi9665134|gb|AAF97318.1|AC0078... |
| Match: gi|7270986|emb|CAB77630.1| |
score: 41.2 |
e-value: 0.007 |
Identity: 31.34% |
Span: 201bp (40.4%) |
Frame: 1 |
| gi|7270986|emb|CAB77630.1| spliceosome-associated essential protein [Candida albicans] |
| Match: gi|18394471|ref|NP_564018.1| |
score: 40.82 |
e-value: 0.009 |
Identity: 31.76% |
Span: 249bp (50.0%) |
Frame: 1 |
| UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding [Arabidopsis thaliana] >gi9665134|gb|AAF97318.1|AC0078... |
| Match: gi|23509415|ref|NP_702082.1| |
score: 40.82 |
e-value: 0.009 |
Identity: 41.18% |
Span: 153bp (30.7%) |
Frame: 1 |
| gi|23509415|ref|NP_702082.1| spliceosome-associated protein, putative [Plasmodium falciparum 3D7] gi|23497260|gb|AAN3... |
| Match: gi|30695647|ref|NP_849806.1| |
score: 40.43 |
e-value: 0.012 |
Identity: 26.97% |
Span: 267bp (53.6%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|15221031|ref|NP_175810.1| |
score: 40.43 |
e-value: 0.012 |
Identity: 26.97% |
Span: 267bp (53.6%) |
Frame: 1 |
| oligouridylate-binding protein, putative [Arabidopsis thaliana] >gi4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U5... |
| Match: gi|23485610|gb|EAA20492.1| |
score: 40.05 |
e-value: 0.016 |
Identity: 41.18% |
Span: 153bp (30.7%) |
Frame: 1 |
| gi|23485610|gb|EAA20492.1| splicing factor 3b subunit 4 [Plasmodium yoelii yoelii] |
| Match: gi|7439965|pir||T00768 |
score: 40.05 |
e-value: 0.016 |
Identity: 33.33% |
Span: 225bp (45.2%) |
Frame: 1 |
| gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - Arabidopsis thaliana gi|3287682|gb|AAC25510.1| Strong... |
| Match: gi|9930616|gb|AAG02117.1| |
score: 40.05 |
e-value: 0.016 |
Identity: 33.33% |
Span: 225bp (45.2%) |
Frame: 1 |
| gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|15219945|ref|NP_173690.1| |
score: 40.05 |
e-value: 0.016 |
Identity: 33.33% |
Span: 225bp (45.2%) |
Frame: 1 |
| gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PABP3) [Arabidopsis thaliana] gi|12643628|sp|O64380|PAB... |
| Match: gi|23237933|dbj|BAC16506.1| |
score: 38.51 |
e-value: 0.047 |
Identity: 26.97% |
Span: 267bp (53.6%) |
Frame: 1 |
| gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa (japonica cultivar-group)] |
|
| 476 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At2g18510.1 |
score: 226.5 |
e-value: 5.1e-60 |
Identity: 83.72% |
Span: 387bp (77.7%) |
Frame: 1 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At2g14550.1 |
score: 201.1 |
e-value: 2.3e-52 |
Identity: 75.97% |
Span: 387bp (77.7%) |
Frame: 1 |
| At2g14550.1 68409.m01472 pre-mRNA splicing factor SF3b, putative non-consensus splice donor TA at exon 5 |
| Match: At1g54080.1 |
score: 80.11 |
e-value: 5.9e-16 |
Identity: 39.25% |
Span: 318bp (63.9%) |
Frame: 1 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At1g54080.2 |
score: 78.57 |
e-value: 1.7e-15 |
Identity: 38.18% |
Span: 318bp (63.9%) |
Frame: 1 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g14100.1 |
score: 74.71 |
e-value: 2.5e-14 |
Identity: 43.53% |
Span: 255bp (51.2%) |
Frame: 1 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At1g49760.1 |
score: 72.4 |
e-value: 1.2e-13 |
Identity: 40.45% |
Span: 258bp (51.8%) |
Frame: 1 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At1g22760.1 |
score: 71.63 |
e-value: 2.1e-13 |
Identity: 34.41% |
Span: 279bp (56.0%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At1g17370.1 |
score: 70.09 |
e-value: 6.1e-13 |
Identity: 32.17% |
Span: 345bp (69.3%) |
Frame: 1 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At3g19130.1 |
score: 67.78 |
e-value: 3e-12 |
Identity: 30.58% |
Span: 363bp (72.9%) |
Frame: 1 |
| At3g19130.1 68410.m02193 RNA-binding protein, putative similar to RNA Binding Protein 47 [Nicotiana plumbaginifolia] ... |
| Match: At2g23350.1 |
score: 66.24 |
e-value: 8.9e-12 |
Identity: 43.37% |
Span: 249bp (50.0%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At1g71770.1 |
score: 65.85 |
e-value: 1.2e-11 |
Identity: 36.14% |
Span: 249bp (50.0%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At5g61030.1 |
score: 65.47 |
e-value: 1.5e-11 |
Identity: 37.65% |
Span: 255bp (51.2%) |
Frame: 1 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At5g47320.1 |
score: 64.31 |
e-value: 3.4e-11 |
Identity: 41.25% |
Span: 240bp (48.2%) |
Frame: 1 |
| At5g47320.1 68412.m05259 40S ribosomal protein S19, mitochondrial precursor |
| Match: At2g21660.2 |
score: 63.93 |
e-value: 4.4e-11 |
Identity: 43.9% |
Span: 246bp (49.4%) |
Frame: 1 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.1 |
score: 63.93 |
e-value: 4.4e-11 |
Identity: 43.9% |
Span: 246bp (49.4%) |
Frame: 1 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At1g22760.1 |
score: 63.54 |
e-value: 5.7e-11 |
Identity: 33.33% |
Span: 387bp (77.7%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At4g13860.1 |
score: 62.77 |
e-value: 9.8e-11 |
Identity: 38.96% |
Span: 231bp (46.4%) |
Frame: 1 |
| At4g13860.1 68411.m01943 RNA recognition motif (RRM) - containing protein similar to glycine-rich RNA binding protein... |
| Match: At3g23830.2 |
score: 62.39 |
e-value: 1.3e-10 |
Identity: 38.82% |
Span: 255bp (51.2%) |
Frame: 1 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At1g49760.1 |
score: 62.39 |
e-value: 1.3e-10 |
Identity: 32.2% |
Span: 354bp (71.1%) |
Frame: 1 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At5g19350.1 |
score: 62.39 |
e-value: 1.3e-10 |
Identity: 36.9% |
Span: 252bp (50.6%) |
Frame: 1 |
| At5g19350.1 68412.m02111 RNA binding protein 45 (RBP45), putative NULL |
| Match: At5g04280.1 |
score: 62.39 |
e-value: 1.3e-10 |
Identity: 39.18% |
Span: 285bp (57.2%) |
Frame: 1 |
| At5g04280.1 68412.m00390 glycine-rich RNA-binding protein |
| Match: At4g03110.1 |
score: 62.39 |
e-value: 1.3e-10 |
Identity: 39.22% |
Span: 306bp (61.4%) |
Frame: 1 |
| At4g03110.1 68411.m00381 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At3g23830.1 |
score: 62.39 |
e-value: 1.3e-10 |
Identity: 38.82% |
Span: 255bp (51.2%) |
Frame: 1 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At4g13850.1 |
score: 62 |
e-value: 1.7e-10 |
Identity: 38.46% |
Span: 273bp (54.8%) |
Frame: 1 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g13850.2 |
score: 62 |
e-value: 1.7e-10 |
Identity: 38.46% |
Span: 273bp (54.8%) |
Frame: 1 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At5g51300.1 |
score: 62 |
e-value: 1.7e-10 |
Identity: 31.2% |
Span: 366bp (73.5%) |
Frame: 1 |
| At5g51300.1 68412.m07948 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At5g51300.2 |
score: 62 |
e-value: 1.7e-10 |
Identity: 31.2% |
Span: 366bp (73.5%) |
Frame: 1 |
| At5g51300.2 68412.m07949 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At1g18630.1 |
score: 61.62 |
e-value: 2.2e-10 |
Identity: 41.33% |
Span: 225bp (45.2%) |
Frame: 1 |
| At1g18630.1 68408.m02096 glycine-rich RNA-binding protein, putative similar to glycine-rich RNA-binding protein from ... |
| Match: At2g23350.1 |
score: 61.23 |
e-value: 2.8e-10 |
Identity: 30% |
Span: 360bp (72.3%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At4g39260.2 |
score: 60.46 |
e-value: 4.9e-10 |
Identity: 43.9% |
Span: 246bp (49.4%) |
Frame: 1 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.3 |
score: 60.46 |
e-value: 4.9e-10 |
Identity: 43.9% |
Span: 246bp (49.4%) |
Frame: 1 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.1 |
score: 60.46 |
e-value: 4.9e-10 |
Identity: 43.9% |
Span: 246bp (49.4%) |
Frame: 1 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g34110.1 |
score: 60.08 |
e-value: 6.3e-10 |
Identity: 34.48% |
Span: 261bp (52.4%) |
Frame: 1 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At1g03457.1 |
score: 59.69 |
e-value: 8.3e-10 |
Identity: 44.74% |
Span: 228bp (45.8%) |
Frame: 1 |
| At1g03457.1 68408.m00292 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At1g49600.1 |
score: 59.69 |
e-value: 8.3e-10 |
Identity: 33.33% |
Span: 273bp (54.8%) |
Frame: 1 |
| At1g49600.1 68408.m05095 RNA binding protein 47 (RBP47), putative similar to DNA binding protein ACBF GB:U90212 GI:18... |
| Match: At1g22760.1 |
score: 59.69 |
e-value: 8.3e-10 |
Identity: 40% |
Span: 255bp (51.2%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At4g24770.1 |
score: 58.92 |
e-value: 1.4e-09 |
Identity: 43.04% |
Span: 237bp (47.6%) |
Frame: 1 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g47490.1 |
score: 58.54 |
e-value: 1.8e-09 |
Identity: 34.52% |
Span: 252bp (50.6%) |
Frame: 1 |
| At1g47490.1 68408.m04830 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At1g71770.1 |
score: 58.15 |
e-value: 2.4e-09 |
Identity: 33.33% |
Span: 354bp (71.1%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At2g37220.1 |
score: 58.15 |
e-value: 2.4e-09 |
Identity: 41.77% |
Span: 237bp (47.6%) |
Frame: 1 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At2g23350.1 |
score: 58.15 |
e-value: 2.4e-09 |
Identity: 34.09% |
Span: 264bp (53.0%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At3g53460.2 |
score: 57.77 |
e-value: 3.1e-09 |
Identity: 37.93% |
Span: 261bp (52.4%) |
Frame: 1 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 57.77 |
e-value: 3.1e-09 |
Identity: 37.93% |
Span: 261bp (52.4%) |
Frame: 1 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g08000.1 |
score: 57.38 |
e-value: 4.1e-09 |
Identity: 38.27% |
Span: 243bp (48.8%) |
Frame: 1 |
| At3g08000.1 68410.m00882 RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:158... |
| Match: At4g27000.1 |
score: 57.38 |
e-value: 4.1e-09 |
Identity: 36.71% |
Span: 237bp (47.6%) |
Frame: 1 |
| At4g27000.1 68411.m03536 RNA binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g... |
| Match: At1g47500.1 |
score: 57.38 |
e-value: 4.1e-09 |
Identity: 34.52% |
Span: 252bp (50.6%) |
Frame: 1 |
| At1g47500.1 68408.m04832 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At5g06210.1 |
score: 57.38 |
e-value: 4.1e-09 |
Identity: 37.5% |
Span: 288bp (57.8%) |
Frame: 1 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At3g26420.1 |
score: 57 |
e-value: 5.4e-09 |
Identity: 40% |
Span: 252bp (50.6%) |
Frame: 1 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At5g50250.1 |
score: 56.61 |
e-value: 7e-09 |
Identity: 41.77% |
Span: 237bp (47.6%) |
Frame: 1 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At4g24770.1 |
score: 55.84 |
e-value: 1.2e-08 |
Identity: 36.54% |
Span: 303bp (60.8%) |
Frame: 1 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g74230.1 |
score: 55.84 |
e-value: 1.2e-08 |
Identity: 39.51% |
Span: 243bp (48.8%) |
Frame: 1 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At1g60650.1 |
score: 55.45 |
e-value: 1.6e-08 |
Identity: 39.51% |
Span: 243bp (48.8%) |
Frame: 1 |
| At1g60650.1 68408.m08723 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At5g54900.1 |
score: 55.45 |
e-value: 1.6e-08 |
Identity: 35% |
Span: 240bp (48.2%) |
Frame: 1 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At1g60650.2 |
score: 55.45 |
e-value: 1.6e-08 |
Identity: 39.51% |
Span: 243bp (48.8%) |
Frame: 1 |
| At1g60650.2 68408.m08724 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At4g16280.3 |
score: 55.07 |
e-value: 2e-08 |
Identity: 36.7% |
Span: 318bp (63.9%) |
Frame: 1 |
| At4g16280.3 68411.m02248 Flowering time control protein (FCA) four alternative splice variants, one splicing isoform ... |
| Match: At4g16280.2 |
score: 55.07 |
e-value: 2e-08 |
Identity: 36.7% |
Span: 318bp (63.9%) |
Frame: 1 |
| At4g16280.2 68411.m02247 Flowering time control protein (FCA) four alternative splice variants, one splicing isoform ... |
| Match: At2g36660.1 |
score: 54.68 |
e-value: 2.7e-08 |
Identity: 37.5% |
Span: 240bp (48.2%) |
Frame: 1 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At5g50250.1 |
score: 53.91 |
e-value: 4.5e-08 |
Identity: 34.48% |
Span: 261bp (52.4%) |
Frame: 1 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g13690.1 |
score: 53.91 |
e-value: 4.5e-08 |
Identity: 30.48% |
Span: 315bp (63.3%) |
Frame: 1 |
| At1g13690.1 68408.m01457 AtE1 protein annotation temporarily based on supporting cDNA gi|1498063|gb|U64825.1|ATU64825 |
| Match: At1g01080.1 |
score: 53.91 |
e-value: 4.5e-08 |
Identity: 30.77% |
Span: 312bp (62.7%) |
Frame: 1 |
| At1g01080.1 68408.m00008 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to 33 KDA... |
| Match: At1g34140.1 |
score: 53.53 |
e-value: 5.9e-08 |
Identity: 36.14% |
Span: 249bp (50.0%) |
Frame: 1 |
| At1g34140.1 68408.m03841 polyadenylate-binding protein (poly(A)-binding protein), putative non-consensus splice donor... |
| Match: At1g49760.1 |
score: 53.53 |
e-value: 5.9e-08 |
Identity: 36.14% |
Span: 249bp (50.0%) |
Frame: 1 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At2g16260.1 |
score: 53.53 |
e-value: 5.9e-08 |
Identity: 43.66% |
Span: 213bp (42.8%) |
Frame: 1 |
| At2g16260.1 68409.m01674 glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from ... |
| Match: At1g71770.1 |
score: 53.14 |
e-value: 7.8e-08 |
Identity: 36.47% |
Span: 255bp (51.2%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At3g52150.1 |
score: 52.76 |
e-value: 1e-07 |
Identity: 40.79% |
Span: 228bp (45.8%) |
Frame: 1 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At5g40490.1 |
score: 52.37 |
e-value: 1.3e-07 |
Identity: 35.87% |
Span: 276bp (55.4%) |
Frame: 1 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At3g46020.1 |
score: 51.99 |
e-value: 1.7e-07 |
Identity: 35% |
Span: 240bp (48.2%) |
Frame: 1 |
| At3g46020.1 68410.m04612 RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RN... |
| Match: At5g64200.2 |
score: 51.6 |
e-value: 2.3e-07 |
Identity: 31.53% |
Span: 321bp (64.5%) |
Frame: 1 |
| At5g64200.2 68412.m08081 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At1g34140.1 |
score: 50.83 |
e-value: 3.8e-07 |
Identity: 43.24% |
Span: 222bp (44.6%) |
Frame: 1 |
| At1g34140.1 68408.m03841 polyadenylate-binding protein (poly(A)-binding protein), putative non-consensus splice donor... |
| Match: At2g36660.1 |
score: 50.45 |
e-value: 5e-07 |
Identity: 31.53% |
Span: 309bp (62.0%) |
Frame: 1 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At2g36660.1 |
score: 48.91 |
e-value: 1.5e-06 |
Identity: 37.5% |
Span: 240bp (48.2%) |
Frame: 1 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At2g36660.1 |
score: 48.91 |
e-value: 1.5e-06 |
Identity: 32.93% |
Span: 246bp (49.4%) |
Frame: 1 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At1g34140.1 |
score: 48.14 |
e-value: 2.5e-06 |
Identity: 34.09% |
Span: 264bp (53.0%) |
Frame: 1 |
| At1g34140.1 68408.m03841 polyadenylate-binding protein (poly(A)-binding protein), putative non-consensus splice donor... |
| Match: At4g34110.1 |
score: 48.14 |
e-value: 2.5e-06 |
Identity: 31.33% |
Span: 249bp (50.0%) |
Frame: 1 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At1g49760.1 |
score: 47.75 |
e-value: 3.3e-06 |
Identity: 32.91% |
Span: 237bp (47.6%) |
Frame: 1 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At2g37220.1 |
score: 47.75 |
e-value: 3.3e-06 |
Identity: 39.19% |
Span: 222bp (44.6%) |
Frame: 1 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g14100.1 |
score: 47.75 |
e-value: 3.3e-06 |
Identity: 36.47% |
Span: 249bp (50.0%) |
Frame: 1 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At1g54080.1 |
score: 47.37 |
e-value: 4.3e-06 |
Identity: 34.12% |
Span: 249bp (50.0%) |
Frame: 1 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At1g54080.2 |
score: 47.37 |
e-value: 4.3e-06 |
Identity: 34.12% |
Span: 249bp (50.0%) |
Frame: 1 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At2g23350.1 |
score: 46.98 |
e-value: 5.6e-06 |
Identity: 32.53% |
Span: 249bp (50.0%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At3g14100.1 |
score: 46.21 |
e-value: 9.5e-06 |
Identity: 31.46% |
Span: 267bp (53.6%) |
Frame: 1 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At3g19130.1 |
score: 44.67 |
e-value: 2.8e-05 |
Identity: 33.77% |
Span: 231bp (46.4%) |
Frame: 1 |
| At3g19130.1 68410.m02193 RNA-binding protein, putative similar to RNA Binding Protein 47 [Nicotiana plumbaginifolia] ... |
| Match: At3g53460.1 |
score: 44.28 |
e-value: 3.6e-05 |
Identity: 36.49% |
Span: 222bp (44.6%) |
Frame: 1 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.2 |
score: 44.28 |
e-value: 3.6e-05 |
Identity: 36.49% |
Span: 222bp (44.6%) |
Frame: 1 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At1g01080.1 |
score: 44.28 |
e-value: 3.6e-05 |
Identity: 35.44% |
Span: 237bp (47.6%) |
Frame: 1 |
| At1g01080.1 68408.m00008 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to 33 KDA... |
| Match: At1g47500.1 |
score: 43.51 |
e-value: 6.1e-05 |
Identity: 27.91% |
Span: 255bp (51.2%) |
Frame: 1 |
| At1g47500.1 68408.m04832 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At1g17370.1 |
score: 43.13 |
e-value: 8e-05 |
Identity: 30.34% |
Span: 267bp (53.6%) |
Frame: 1 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At1g03457.1 |
score: 43.13 |
e-value: 8e-05 |
Identity: 30.47% |
Span: 375bp (75.3%) |
Frame: 1 |
| At1g03457.1 68408.m00292 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At1g47490.1 |
score: 43.13 |
e-value: 8e-05 |
Identity: 22.95% |
Span: 351bp (70.5%) |
Frame: 1 |
| At1g47490.1 68408.m04830 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At1g17370.1 |
score: 40.82 |
e-value: 0.0004 |
Identity: 31.76% |
Span: 249bp (50.0%) |
Frame: 1 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At4g03110.1 |
score: 40.82 |
e-value: 0.0004 |
Identity: 29.07% |
Span: 258bp (51.8%) |
Frame: 1 |
| At4g03110.1 68411.m00381 RNA-binding protein, putative similar to Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-bi... |
| Match: At3g52150.1 |
score: 40.82 |
e-value: 0.0004 |
Identity: 29.49% |
Span: 234bp (47.0%) |
Frame: 1 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At1g54080.1 |
score: 40.43 |
e-value: 0.00052 |
Identity: 26.97% |
Span: 267bp (53.6%) |
Frame: 1 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At1g49600.1 |
score: 40.43 |
e-value: 0.00052 |
Identity: 32.47% |
Span: 231bp (46.4%) |
Frame: 1 |
| At1g49600.1 68408.m05095 RNA binding protein 47 (RBP47), putative similar to DNA binding protein ACBF GB:U90212 GI:18... |
| Match: At1g54080.2 |
score: 40.43 |
e-value: 0.00052 |
Identity: 26.97% |
Span: 267bp (53.6%) |
Frame: 1 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At1g22760.1 |
score: 40.05 |
e-value: 0.00068 |
Identity: 33.33% |
Span: 225bp (45.2%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At1g71770.1 |
score: 39.28 |
e-value: 0.001 |
Identity: 30.67% |
Span: 225bp (45.2%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At1g47500.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 26.97% |
Span: 267bp (53.6%) |
Frame: 1 |
| At1g47500.1 68408.m04832 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At5g40490.1 |
score: 36.96 |
e-value: 0.006 |
Identity: 32.2% |
Span: 177bp (35.5%) |
Frame: 1 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At1g47490.1 |
score: 36.96 |
e-value: 0.006 |
Identity: 25.84% |
Span: 267bp (53.6%) |
Frame: 1 |
| At1g47490.1 68408.m04830 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
|
| 111 lower scoring hits censored -- only 100 best hits are stored. |
