| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224069248|ref|XP_002326311.1| |
score: 144 |
e-value: 3e-33 |
Identity: 95.77% |
Span: 213bp (41.3%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi224071453|ref|XP_002303467.1| predicted protein [Populus trichocarpa] >gi|... |
| Match: gi|225425585|ref|XP_002263065.1| |
score: 141 |
e-value: 2e-32 |
Identity: 94.37% |
Span: 213bp (41.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270241334|emb|CBI28558.1| unnamed protein product [Vitis vinifera] |
| Match: gi|2833375|sp|Q39290.1|RPAB5_BRANA |
score: 141 |
e-value: 2e-32 |
Identity: 92.96% |
Span: 213bp (41.3%) |
Frame: 2 |
| RecName: Full=DNA-directed RNA polymerases I, II, and III subunit RPABC5; Short=RNA polymerases I, II, and III subuni... |
| Match: gi|226528766|ref|NP_001148175.1| |
score: 140 |
e-value: 5e-32 |
Identity: 90.41% |
Span: 219bp (42.4%) |
Frame: 2 |
| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays] >gi224030055|gb|ACN34103.1| unknown [Zea mays] |
| Match: gi|30682258|ref|NP_849640.1| |
score: 140 |
e-value: 5e-32 |
Identity: 91.55% |
Span: 213bp (41.3%) |
Frame: 2 |
| NRPB10; DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21537033|gb|AAM61374.1| RNA polymerase II... |
| Match: gi|116778557|gb|ABK20909.1| |
score: 139 |
e-value: 9e-32 |
Identity: 94.2% |
Span: 207bp (40.1%) |
Frame: 2 |
| unknown [Picea sitchensis] >gi116781551|gb|ABK22149.1| unknown [Picea sitchensis] >gi|116789545|gb|ABK25286.1| unknow... |
| Match: gi|102139964|gb|ABF70104.1| |
score: 139 |
e-value: 9e-32 |
Identity: 94.2% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] |
| Match: gi|115484555|ref|NP_001067421.1| |
score: 139 |
e-value: 1e-31 |
Identity: 89.19% |
Span: 222bp (43.0%) |
Frame: 2 |
| Os11g0194800 [Oryza sativa (japonica cultivar-group)] >gi62733950|gb|AAX96059.1| dna-directed rna polymerase ii 8.2 k... |
| Match: gi|115487650|ref|NP_001066312.1| |
score: 139 |
e-value: 2e-31 |
Identity: 94.2% |
Span: 207bp (40.1%) |
Frame: 2 |
| Os12g0180400 [Oryza sativa (japonica cultivar-group)] >gi113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa Japonic... |
| Match: gi|255631340|gb|ACU16037.1| |
score: 138 |
e-value: 2e-31 |
Identity: 90.14% |
Span: 213bp (41.3%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|226506188|ref|NP_001152395.1| |
score: 138 |
e-value: 2e-31 |
Identity: 91.55% |
Span: 213bp (41.3%) |
Frame: 2 |
| LOC100286035 [Zea mays] >gi195655855|gb|ACG47395.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays] |
| Match: gi|168033365|ref|XP_001769186.1| |
score: 138 |
e-value: 2e-31 |
Identity: 90.14% |
Span: 213bp (41.3%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162679612|gb|EDQ66058.1| predicted protein [Physcomitrella... |
| Match: gi|15220572|ref|NP_176363.1| |
score: 138 |
e-value: 2e-31 |
Identity: 91.3% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerase II, putative (RPB10) [Arabidopsis thaliana] >gi11134747|sp|Q9SYA6.1|RPAB5_ARATH RecName: ... |
| Match: gi|226510500|ref|NP_001149707.1| |
score: 138 |
e-value: 3e-31 |
Identity: 91.55% |
Span: 213bp (41.3%) |
Frame: 2 |
| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays] >gi242082992|ref|XP_002441921.1| hypothetical protein S... |
| Match: gi|255583986|ref|XP_002532739.1| |
score: 135 |
e-value: 1e-30 |
Identity: 86.84% |
Span: 213bp (41.3%) |
Frame: 2 |
| DNA-directed RNA polymerase II, subunit n, putative [Ricinus communis] >gi223527516|gb|EEF29641.1| DNA-directed RNA p... |
| Match: gi|222615665|gb|EEE51797.1| |
score: 134 |
e-value: 4e-30 |
Identity: 87.84% |
Span: 222bp (43.0%) |
Frame: 2 |
| hypothetical protein OsJ_33258 [Oryza sativa Japonica Group] |
| Match: gi|255086357|ref|XP_002509145.1| |
score: 129 |
e-value: 1e-28 |
Identity: 86.96% |
Span: 207bp (40.1%) |
Frame: 2 |
| predicted protein [Micromonas sp. RCC299] >gi226524423|gb|ACO70403.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|226456938|gb|EEH54238.1| |
score: 129 |
e-value: 1e-28 |
Identity: 84.51% |
Span: 213bp (41.3%) |
Frame: 2 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|242067755|ref|XP_002449154.1| |
score: 128 |
e-value: 2e-28 |
Identity: 84.51% |
Span: 213bp (41.3%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_05g005840 [Sorghum bicolor] >gi241934997|gb|EES08142.1| hypothetical protein SORBIDRA... |
| Match: gi|226505876|ref|NP_001151378.1| |
score: 127 |
e-value: 4e-28 |
Identity: 93.65% |
Span: 189bp (36.6%) |
Frame: 2 |
| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays] >gi195646300|gb|ACG42618.1| DNA-directed RNA polymerase... |
| Match: gi|159470673|ref|XP_001693481.1| |
score: 125 |
e-value: 1e-27 |
Identity: 85.29% |
Span: 204bp (39.5%) |
Frame: 2 |
| DNA-directed RNA polymerases I/II/III subunit [Chlamydomonas reinhardtii] >gi158282984|gb|EDP08735.1| DNA-directed RN... |
| Match: gi|145352128|ref|XP_001420409.1| |
score: 125 |
e-value: 2e-27 |
Identity: 86.57% |
Span: 201bp (39.0%) |
Frame: 2 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144580643|gb|ABO98702.1| predicted protein [Ostreococcus luci... |
| Match: gi|219115427|ref|XP_002178509.1| |
score: 123 |
e-value: 9e-27 |
Identity: 87.5% |
Span: 192bp (37.2%) |
Frame: 2 |
| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi217410244|gb|EEC50174.1| predicted protein [Phaeodactylu... |
| Match: gi|260826958|ref|XP_002608432.1| |
score: 122 |
e-value: 2e-26 |
Identity: 82.35% |
Span: 204bp (39.5%) |
Frame: 2 |
| hypothetical protein BRAFLDRAFT_283143 [Branchiostoma floridae] >gi229293783|gb|EEN64442.1| hypothetical protein BRAF... |
| Match: gi|195452198|ref|XP_002073255.1| |
score: 121 |
e-value: 3e-26 |
Identity: 83.58% |
Span: 201bp (39.0%) |
Frame: 2 |
| GK14032 [Drosophila willistoni] >gi194169340|gb|EDW84241.1| GK14032 [Drosophila willistoni] |
|
| 147 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G11475.1 |
score: 140 |
e-value: 4e-34 |
Identity: 91.55% |
Span: 213bp (41.3%) |
Frame: 2 |
| DNA-directed RNA polymerase II, putative | chr1:3862520-3863805 FORWARD |
| Match: At1G61700.1 |
score: 138 |
e-value: 2e-33 |
Identity: 91.3% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerase II, putative (RPB10) | chr1:22790770-22791777 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q39290 |
score: 141 |
e-value: 2e-33 |
Identity: 92.96% |
Span: 213bp (41.3%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Brassica napus PE=3 SV=1 |
| Match: Q9SYA6 |
score: 138 |
e-value: 2e-32 |
Identity: 91.3% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Arabidopsis thaliana GN=At1g61700 PE=2 SV=1 |
| Match: P62876 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (39.0%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Mus musculus GN=Polr2l PE=2 SV=1 |
| Match: P62875 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (39.0%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Homo sapiens GN=POLR2L PE=1 SV=1 |
| Match: Q9VC49 |
score: 120 |
e-value: 6e-27 |
Identity: 82.09% |
Span: 201bp (39.0%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Drosophila melanogaster GN=Rpb10 PE=1 SV=1 |
| Match: Q55AB6 |
score: 120 |
e-value: 6e-27 |
Identity: 86.15% |
Span: 195bp (37.8%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit rpabc5 OS=Dictyostelium discoideum GN=polr2l PE=3 SV=1 |
| Match: Q6QN04 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (39.0%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Chinchilla lanigera GN=POLR2L PE=3 SV=1 |
| Match: Q32P78 |
score: 120 |
e-value: 6e-27 |
Identity: 80.6% |
Span: 201bp (39.0%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Bos taurus GN=POLR2L PE=3 SV=1 |
| Match: Q9GR61 |
score: 117 |
e-value: 5e-26 |
Identity: 77.61% |
Span: 201bp (39.0%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Caenorhabditis elegans GN=Y37E3.3 PE=2 SV=1 |
| Match: O13877 |
score: 110 |
e-value: 5e-24 |
Identity: 72.46% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Schizosaccharomyces pombe GN=rpb10 PE=1 SV=2 |
| Match: P22139 |
score: 102 |
e-value: 1e-21 |
Identity: 67.14% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Saccharomyces cerevisiae GN=RPB10 PE=1 SV=2 |
| Match: Q75BV8 |
score: 100 |
e-value: 6e-21 |
Identity: 64.29% |
Span: 207bp (40.1%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Ashbya gossypii GN=RPB10 PE=3 SV=1 |
| Match: Q8SRS6 |
score: 84 |
e-value: 5e-16 |
Identity: 51.52% |
Span: 198bp (38.4%) |
Frame: 2 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Encephalitozoon cuniculi GN=RPB10 PE=3 SV=1 |
| Match: Q8TVB4 |
score: 80.1 |
e-value: 7e-15 |
Identity: 53.97% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Methanopyrus kandleri GN=rpoN PE=3 SV=1 |
| Match: A4YIM8 |
score: 79 |
e-value: 1e-14 |
Identity: 54.84% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpoN PE=3 SV=1 |
| Match: Q96YW4 |
score: 78.6 |
e-value: 2e-14 |
Identity: 50% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus tokodaii GN=rpoN PE=3 SV=1 |
| Match: O59298 |
score: 77.4 |
e-value: 4e-14 |
Identity: 56.45% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus horikoshii GN=rpoN PE=3 SV=2 |
| Match: Q980Z8 |
score: 77 |
e-value: 6e-14 |
Identity: 48.39% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus solfataricus GN=rpoN PE=1 SV=1 |
| Match: P60292 |
score: 77 |
e-value: 6e-14 |
Identity: 54.84% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus furiosus GN=rpoN PE=3 SV=1 |
| Match: P60291 |
score: 77 |
e-value: 6e-14 |
Identity: 54.84% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Pyrococcus abyssi GN=rpoN PE=3 SV=1 |
| Match: C3N8S2 |
score: 75.9 |
e-value: 1e-13 |
Identity: 46.77% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpoN PE=3 SV=1 |
| Match: C3NMP6 |
score: 75.9 |
e-value: 1e-13 |
Identity: 46.77% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpoN PE=3 SV=1 |
| Match: C3MZ09 |
score: 75.9 |
e-value: 1e-13 |
Identity: 46.77% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpoN PE=3 SV=1 |
| Match: C3MJQ1 |
score: 75.9 |
e-value: 1e-13 |
Identity: 46.77% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpoN PE=3 SV=1 |
| Match: C4KJ97 |
score: 75.9 |
e-value: 1e-13 |
Identity: 46.77% |
Span: 186bp (36.0%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit N OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpoN PE=3 SV=1 |
|
| 22 lower scoring hits censored -- only 25 best hits are stored. |
