| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|421960|pir||S34448 |
score: 227.6 |
e-value: 7.3e-59 |
Identity: 98.69% |
Span: 459bp (88.6%) |
Frame: 2 |
| gi|421960|pir||S34448 small nuclear ribonucleoprotein U2B'' - potato gi|169589|gb|AAA33847.1| spliceosomal protein |
| Match: gi|15227729|ref|NP_180585.1| |
score: 162.5 |
e-value: 2.9e-39 |
Identity: 65.79% |
Span: 453bp (87.5%) |
Frame: 2 |
| U2B'' (U2 small nuclear ribonucleoprotein B); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis th... |
| Match: gi|21593001|gb|AAM64950.1| |
score: 157.9 |
e-value: 7.1e-38 |
Identity: 64.47% |
Span: 453bp (87.5%) |
Frame: 2 |
| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana] |
| Match: gi|19347861|gb|AAL85989.1| |
score: 157.5 |
e-value: 9.3e-38 |
Identity: 83.17% |
Span: 303bp (58.5%) |
Frame: 2 |
| putative spliceosomal protein (U2B) [Arabidopsis thaliana] |
| Match: gi|30679892|ref|NP_850936.1| |
score: 157.1 |
e-value: 1.2e-37 |
Identity: 84.16% |
Span: 303bp (58.5%) |
Frame: 2 |
| small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana] >gi23296313|gb|... |
| Match: gi|25294325|pir||C86204 |
score: 157.1 |
e-value: 1.2e-37 |
Identity: 84.16% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|25294325|pir||C86204 hypothetical protein [imported] - Arabidopsis thaliana gi|8954049|gb|AAF82223.1| Strong simil... |
| Match: gi|30679897|ref|NP_172177.3| |
score: 157.1 |
e-value: 1.2e-37 |
Identity: 84.16% |
Span: 303bp (58.5%) |
Frame: 2 |
| small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana] |
| Match: gi|2119045|pir||S59117 |
score: 123.2 |
e-value: 1.9e-27 |
Identity: 67.35% |
Span: 294bp (56.8%) |
Frame: 2 |
| gi|2119045|pir||S59117 small nuclear ribonucleoprotein U1A - potato gi|1050840|emb|CAA90282.1| U1snRNP-specific prote... |
| Match: gi|47211375|emb|CAF89828.1| |
score: 121.3 |
e-value: 7.4e-27 |
Identity: 71.13% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|37748043|gb|AAH59527.1| |
score: 120.9 |
e-value: 9.7e-27 |
Identity: 66.34% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|37748043|gb|AAH59527.1| Unknown (protein for IMAGE:4201535) [Danio rerio] |
| Match: gi|48139036|ref|XP_393440.1| |
score: 119 |
e-value: 3.7e-26 |
Identity: 69.07% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|48139036|ref|XP_393440.1| similar to ENSANGP00000019197 [Apis mellifera] |
| Match: gi|31240911|ref|XP_320869.1| |
score: 118.6 |
e-value: 4.8e-26 |
Identity: 61.9% |
Span: 315bp (60.8%) |
Frame: 2 |
| gi|31240911|ref|XP_320869.1| ENSANGP00000019197 [Anopheles gambiae] gi|21288097|gb|EAA00418.1| ENSANGP00000019197 [An... |
| Match: gi|4507123|ref|NP_003083.1| |
score: 116.7 |
e-value: 1.8e-25 |
Identity: 53.9% |
Span: 423bp (81.7%) |
Frame: 2 |
| gi|4507123|ref|NP_003083.1| small nuclear ribonucleoprotein polypeptide B''; U2 small nuclear ribonucleoprotein B'' [... |
| Match: gi|12836810|dbj|BAB23823.1| |
score: 116.3 |
e-value: 2.4e-25 |
Identity: 67.01% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|12836810|dbj|BAB23823.1| unnamed protein product [Mus musculus] |
| Match: gi|27692318|gb|AAH08311.1| |
score: 116.3 |
e-value: 2.4e-25 |
Identity: 67.01% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|27692318|gb|AAH08311.1| Similar to small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens] |
| Match: gi|23956110|ref|NP_067310.1| |
score: 116.3 |
e-value: 2.4e-25 |
Identity: 67.01% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B [Mus musculus] gi|12847289|dbj|BAB27510.1| unnamed ... |
| Match: gi|34858820|ref|XP_342529.1| |
score: 116.3 |
e-value: 2.4e-25 |
Identity: 67.01% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|34858820|ref|XP_342529.1| similar to U2 small nuclear ribonucleoprotein B [Rattus norvegicus] |
| Match: gi|12850013|dbj|BAB28565.1| |
score: 116.3 |
e-value: 2.4e-25 |
Identity: 67.01% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus] |
| Match: gi|17737284|ref|NP_511045.1| |
score: 114.4 |
e-value: 9e-25 |
Identity: 69.15% |
Span: 282bp (54.4%) |
Frame: 2 |
| gi|17737284|ref|NP_511045.1| sans fille CG4528-PA [Drosophila melanogaster] gi|1173325|sp|P43332|RU1A_DROME U1 small ... |
| Match: gi|3659937|pdb|1A9N|B |
score: 113.2 |
e-value: 2e-24 |
Identity: 67.37% |
Span: 285bp (55.0%) |
Frame: 2 |
| gi|3659937|pdb|1A9N|B Chain B, U2 B''A'RNA TERNARY COMPLEX gi|3659938|pdb|1A9N|D Chain D, U2 B''A'RNA TERNARY COMPLEX |
| Match: gi|47225009|emb|CAF97424.1| |
score: 110.2 |
e-value: 1.7e-23 |
Identity: 62.38% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|34897622|ref|NP_910157.1| |
score: 110.2 |
e-value: 1.7e-23 |
Identity: 64.21% |
Span: 285bp (55.0%) |
Frame: 2 |
| gi|34897622|ref|NP_910157.1| putative small nuclear ribonucleoprotein U1A [Oryza sativa] gi|14595706|gb|AAK70905.1| p... |
| Match: gi|4759156|ref|NP_004587.1| |
score: 110.2 |
e-value: 1.7e-23 |
Identity: 61.39% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein polypeptide A [Homo sapiens] gi|134092|sp|P09012|RU1A_HUM... |
| Match: gi|38641409|gb|AAR26269.1| |
score: 110.2 |
e-value: 1.7e-23 |
Identity: 61.39% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus] |
| Match: gi|34855379|ref|XP_214845.2| |
score: 110.2 |
e-value: 1.7e-23 |
Identity: 61.39% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|34855379|ref|XP_214845.2| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Rattus norvegicus] |
| Match: gi|1633231|pdb|1FHT| |
score: 109.8 |
e-value: 2.2e-23 |
Identity: 64.89% |
Span: 282bp (54.4%) |
Frame: 2 |
| gi|1633231|pdb|1FHT| Rna-Binding Domain Of The U1a Spliceosomal Protein U1a117, Nmr, 43 Structures |
| Match: gi|41017904|sp|Q62189|RU1A_MOUSE |
score: 109.8 |
e-value: 2.2e-23 |
Identity: 66.67% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|41017904|sp|Q62189|RU1A_MOUSE U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A) >gi|5... |
| Match: gi|31980689|ref|NP_056597.2| |
score: 109.8 |
e-value: 2.2e-23 |
Identity: 66.67% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein polypeptide A; protein A of the U1 small nuclear RNA; U1... |
| Match: gi|15226631|ref|NP_182280.1| |
score: 109 |
e-value: 3.8e-23 |
Identity: 62.89% |
Span: 291bp (56.2%) |
Frame: 2 |
| U1A (SPLICEOSOMAL PROTEIN U1A); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi105... |
| Match: gi|1173326|sp|P45429|RU1A_XENLA |
score: 107.8 |
e-value: 8.5e-23 |
Identity: 60.82% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|1173326|sp|P45429|RU1A_XENLA U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) gi|345608|pir||S30564 small... |
| Match: gi|27924189|gb|AAH44979.1| |
score: 107.8 |
e-value: 8.5e-23 |
Identity: 60.82% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis] |
| Match: gi|41054443|ref|NP_955965.1| |
score: 107.5 |
e-value: 1.1e-22 |
Identity: 50.35% |
Span: 423bp (81.7%) |
Frame: 2 |
| gi|41054443|ref|NP_955965.1| Unknown (protein for MGC:77810); wu:fc19d01 [Danio rerio] >gi|39850066|gb|AAH64308.1| Un... |
| Match: gi|2982060|pdb|1AUD|A |
score: 106.3 |
e-value: 2.5e-22 |
Identity: 62.77% |
Span: 282bp (54.4%) |
Frame: 2 |
| gi|2982060|pdb|1AUD|A Chain A, U1a-Utrrna, Nmr, 31 Structures |
| Match: gi|7546344|pdb|1DZ5|A |
score: 106.3 |
e-value: 2.5e-22 |
Identity: 62.77% |
Span: 282bp (54.4%) |
Frame: 2 |
| gi|7546344|pdb|1DZ5|A Chain A, The Nmr Structure Of The 38kda U1a Protein-Pie Rna Complex Reveals The Basis Of Cooper... |
| Match: gi|22219383|pdb|1M5K|C |
score: 105.5 |
e-value: 4.2e-22 |
Identity: 60% |
Span: 300bp (57.9%) |
Frame: 2 |
| gi|22219383|pdb|1M5K|C Chain C, Crystal Structure Of A Hairpin Ribozyme In The Catalytically-Active Conformation gi|2... |
| Match: gi|38073622|ref|XP_138180.3| |
score: 104.8 |
e-value: 7.2e-22 |
Identity: 64.52% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|38073622|ref|XP_138180.3| similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|39585996|emb|CAE68287.1| |
score: 104 |
e-value: 1.2e-21 |
Identity: 58.76% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|39585996|emb|CAE68287.1| Hypothetical protein CBG13972 [Caenorhabditis briggsae] |
| Match: gi|38093549|ref|XP_358059.1| |
score: 103.6 |
e-value: 1.6e-21 |
Identity: 64.52% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|38093549|ref|XP_358059.1| similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|33357758|pdb|1OIA|A |
score: 102.8 |
e-value: 2.7e-21 |
Identity: 62.11% |
Span: 285bp (55.0%) |
Frame: 2 |
| gi|33357758|pdb|1OIA|A Chain A, U1a Rnp Domain 1-95 gi|33357759|pdb|1OIA|B Chain B, U1a Rnp Domain 1-95 |
| Match: gi|17541322|ref|NP_500505.1| |
score: 102.1 |
e-value: 4.6e-21 |
Identity: 58.76% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|17541322|ref|NP_500505.1| small nuclear ribonucleoprotein (rnp-3) [Caenorhabditis elegans] gi|7505521|pir||T29388 ... |
| Match: gi|38090057|ref|XP_356179.1| |
score: 101.3 |
e-value: 7.9e-21 |
Identity: 57.43% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|38090057|ref|XP_356179.1| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Mus musculus] |
| Match: gi|1431699|pdb|1URN|A |
score: 100.9 |
e-value: 1e-20 |
Identity: 64.04% |
Span: 267bp (51.5%) |
Frame: 2 |
| gi|1431699|pdb|1URN|A Chain A, U1aRNA COMPLEX gi|1431701|pdb|1URN|B Chain B, U1aRNA COMPLEX gi|1431703|pdb|1URN|C Cha... |
| Match: gi|38073944|ref|XP_354725.1| |
score: 98.98 |
e-value: 3.9e-20 |
Identity: 62.37% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|38073944|ref|XP_354725.1| similar to U2 small nuclear ribonucleoprotein B [Mus musculus] |
| Match: gi|38093673|ref|XP_111314.2| |
score: 98.98 |
e-value: 3.9e-20 |
Identity: 62.37% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|38093673|ref|XP_111314.2| similar to GLE1-like, RNA export mediator; GLE1 (yeast homolog)-like, RNA export mediato... |
| Match: gi|6730009|pdb|1DRZ|A |
score: 95.52 |
e-value: 4.3e-19 |
Identity: 60.44% |
Span: 273bp (52.7%) |
Frame: 2 |
| gi|6730009|pdb|1DRZ|A Chain A, U1a Spliceosomal ProteinHEPATITIS DELTA VIRUS GENOMIC Ribozyme Complex |
| Match: gi|6137598|pdb|1CX0|A |
score: 95.13 |
e-value: 5.7e-19 |
Identity: 61.8% |
Span: 267bp (51.5%) |
Frame: 2 |
| gi|6137598|pdb|1CX0|A Chain A, Hepatitis Delta Virus Ribozyme |
| Match: gi|17541324|ref|NP_500504.1| |
score: 90.12 |
e-value: 1.8e-17 |
Identity: 50.52% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|17541324|ref|NP_500504.1| small nuclear ribonucleoprotein (rnp-2) [Caenorhabditis elegans] gi|15055398|gb|AAA98032... |
| Match: gi|39585995|emb|CAE68286.1| |
score: 89.74 |
e-value: 2.4e-17 |
Identity: 48.45% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|39585995|emb|CAE68286.1| Hypothetical protein CBG13971 [Caenorhabditis briggsae] |
| Match: gi|38103960|gb|EAA50592.1| |
score: 87.04 |
e-value: 1.5e-16 |
Identity: 42.86% |
Span: 288bp (55.6%) |
Frame: 2 |
| gi|38103960|gb|EAA50592.1| hypothetical protein MG04351.4 [Magnaporthe grisea 70-15] |
| Match: gi|38081798|ref|XP_354985.1| |
score: 83.96 |
e-value: 1.3e-15 |
Identity: 58.06% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|38081798|ref|XP_354985.1| similar to small nuclear RNA [Mus musculus] |
| Match: gi|32418980|ref|XP_329968.1| |
score: 83.57 |
e-value: 1.7e-15 |
Identity: 44.21% |
Span: 282bp (54.4%) |
Frame: 2 |
| gi|32418980|ref|XP_329968.1| hypothetical protein [Neurospora crassa] gi|28926050|gb|EAA35039.1| hypothetical protein... |
| Match: gi|19113216|ref|NP_596424.1| |
score: 82.42 |
e-value: 3.8e-15 |
Identity: 48.35% |
Span: 273bp (52.7%) |
Frame: 2 |
| gi|19113216|ref|NP_596424.1| Small nuclear ribonucleoprotein [Schizosaccharomyces pombe] gi|7493412|pir||T40479 small... |
| Match: gi|38093624|ref|XP_358084.1| |
score: 82.03 |
e-value: 5e-15 |
Identity: 55.07% |
Span: 207bp (40.0%) |
Frame: 2 |
| gi|38093624|ref|XP_358084.1| similar to small nuclear RNA [Mus musculus] |
| Match: gi|23485600|gb|EAA20485.1| |
score: 82.03 |
e-value: 5e-15 |
Identity: 45.36% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|19112345|ref|NP_595553.1| |
score: 80.88 |
e-value: 1.1e-14 |
Identity: 54.65% |
Span: 258bp (49.8%) |
Frame: 2 |
| gi|19112345|ref|NP_595553.1| spliceosomal protein [Schizosaccharomyces pombe] gi|2257544|dbj|BAA21437.1| spliceosomal... |
| Match: gi|19112363|ref|NP_595571.1| |
score: 80.88 |
e-value: 1.1e-14 |
Identity: 54.65% |
Span: 258bp (49.8%) |
Frame: 2 |
| gi|19112363|ref|NP_595571.1| U2 b'-like spliceosomal protein; similar to S. cerevisiae MSL1; U2 snRNA-associated prot... |
| Match: gi|7505522|pir||T29387 |
score: 77.8 |
e-value: 9.4e-14 |
Identity: 47.42% |
Span: 291bp (56.2%) |
Frame: 2 |
| gi|7505522|pir||T29387 hypothetical protein K08D10.4 - Caenorhabditis elegans |
| Match: gi|49084028|ref|XP_404246.1| |
score: 77.41 |
e-value: 1.2e-13 |
Identity: 43.16% |
Span: 285bp (55.0%) |
Frame: 2 |
| gi|49084028|ref|XP_404246.1| hypothetical protein AN0109.2 [Aspergillus nidulans FGSC A4] >gi|40746131|gb|EAA65287.1|... |
| Match: gi|23481350|gb|EAA17655.1| |
score: 75.48 |
e-value: 4.7e-13 |
Identity: 42.73% |
Span: 324bp (62.5%) |
Frame: 2 |
| gi|23481350|gb|EAA17655.1| u1 small nuclear ribonucleoprotein a [Plasmodium yoelii yoelii] |
| Match: gi|23613861|ref|NP_704882.1| |
score: 73.56 |
e-value: 1.8e-12 |
Identity: 43.56% |
Span: 303bp (58.5%) |
Frame: 2 |
| gi|23613861|ref|NP_704882.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium falciparum 3D7] gi|2350524... |
| Match: gi|23619006|ref|NP_704968.1| |
score: 71.63 |
e-value: 6.7e-12 |
Identity: 42.71% |
Span: 288bp (55.6%) |
Frame: 2 |
| gi|23619006|ref|NP_704968.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium falciparum 3D7] gi|23615213|e... |
| Match: gi|38111102|gb|EAA56730.1| |
score: 69.71 |
e-value: 2.6e-11 |
Identity: 41.94% |
Span: 279bp (53.9%) |
Frame: 2 |
| gi|38111102|gb|EAA56730.1| hypothetical protein MG07085.4 [Magnaporthe grisea 70-15] |
| Match: gi|40950383|gb|AAR97825.1| |
score: 68.55 |
e-value: 5.7e-11 |
Identity: 65.22% |
Span: 138bp (26.6%) |
Frame: 2 |
| gi|40950383|gb|AAR97825.1| sans fille [Drosophila mojavensis] >gi|40950385|gb|AAR97826.1| sans fille [Drosophila moja... |
| Match: gi|40950435|gb|AAR97851.1| |
score: 68.55 |
e-value: 5.7e-11 |
Identity: 65.22% |
Span: 138bp (26.6%) |
Frame: 2 |
| gi|40950435|gb|AAR97851.1| sans fille [Drosophila navojoa] >gi|40950437|gb|AAR97852.1| sans fille [Drosophila navojoa... |
| Match: gi|40950451|gb|AAR97859.1| |
score: 68.17 |
e-value: 7.4e-11 |
Identity: 66.67% |
Span: 135bp (26.1%) |
Frame: 2 |
| gi|40950451|gb|AAR97859.1| sans fille [Drosophila arizonae] |
| Match: gi|49079014|ref|XP_403200.1| |
score: 67.78 |
e-value: 9.7e-11 |
Identity: 44.44% |
Span: 213bp (41.1%) |
Frame: 2 |
| gi|49079014|ref|XP_403200.1| hypothetical protein UM05585.1 [Ustilago maydis 521] >gi|46101218|gb|EAK86451.1| hypothe... |
| Match: gi|40950461|gb|AAR97864.1| |
score: 67.4 |
e-value: 1.3e-10 |
Identity: 63.04% |
Span: 138bp (26.6%) |
Frame: 2 |
| gi|40950461|gb|AAR97864.1| sans fille [Drosophila parisiena] >gi|40950463|gb|AAR97865.1| sans fille [Drosophila paris... |
| Match: gi|46116888|ref|XP_384462.1| |
score: 62.77 |
e-value: 3.1e-09 |
Identity: 37.78% |
Span: 270bp (52.1%) |
Frame: 2 |
| gi|46116888|ref|XP_384462.1| hypothetical protein FG04286.1 [Gibberella zeae PH-1] >gi|42550769|gb|EAA73612.1| hypoth... |
| Match: gi|32416524|ref|XP_328740.1| |
score: 60.46 |
e-value: 1.6e-08 |
Identity: 42.35% |
Span: 255bp (49.2%) |
Frame: 2 |
| gi|32416524|ref|XP_328740.1| hypothetical protein [Neurospora crassa] gi|28924315|gb|EAA33468.1| hypothetical protein... |
| Match: gi|49096912|ref|XP_409916.1| |
score: 59.69 |
e-value: 2.6e-08 |
Identity: 50.98% |
Span: 153bp (29.5%) |
Frame: 2 |
| gi|49096912|ref|XP_409916.1| hypothetical protein AN5779.2 [Aspergillus nidulans FGSC A4] >gi|40743682|gb|EAA62872.1|... |
| Match: gi|49068266|ref|XP_398422.1| |
score: 59.31 |
e-value: 3.5e-08 |
Identity: 44.21% |
Span: 270bp (52.1%) |
Frame: 2 |
| gi|49068266|ref|XP_398422.1| hypothetical protein UM00807.1 [Ustilago maydis 521] >gi|46095668|gb|EAK80901.1| hypothe... |
| Match: gi|45184845|ref|NP_982563.1| |
score: 59.31 |
e-value: 3.5e-08 |
Identity: 44.94% |
Span: 261bp (50.4%) |
Frame: 2 |
| gi|45184845|ref|NP_982563.1| AAR022Wp [Eremothecium gossypii] >gi|44980454|gb|AAS50387.1| AAR022Wp [Eremothecium goss... |
| Match: gi|46438288|gb|EAK97621.1| |
score: 58.15 |
e-value: 7.7e-08 |
Identity: 43.18% |
Span: 264bp (51.0%) |
Frame: 2 |
| gi|46438288|gb|EAK97621.1| hypothetical protein CaO19.7375 [Candida albicans SC5314] |
| Match: gi|46445270|gb|EAL04539.1| |
score: 54.68 |
e-value: 8.5e-07 |
Identity: 35.45% |
Span: 330bp (63.7%) |
Frame: 2 |
| gi|46445270|gb|EAL04539.1| hypothetical protein CaO19.12210 [Candida albicans SC5314] |
| Match: gi|46445468|gb|EAL04736.1| |
score: 53.53 |
e-value: 1.9e-06 |
Identity: 36.96% |
Span: 276bp (53.3%) |
Frame: 2 |
| gi|46445468|gb|EAL04736.1| hypothetical protein CaO19.4748 [Candida albicans SC5314] |
| Match: gi|32398796|emb|CAD98506.1| |
score: 45.44 |
e-value: 0.00052 |
Identity: 32.95% |
Span: 264bp (51.0%) |
Frame: 2 |
| gi|32398796|emb|CAD98506.1| U1 snrnp, possible [Cryptosporidium parvum] |
| Match: gi|46229837|gb|EAK90655.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 38.82% |
Span: 255bp (49.2%) |
Frame: 2 |
| gi|46229837|gb|EAK90655.1| U1 small nuclear ribonucleoprotein A, rrm domain [Cryptosporidium parvum] |
| Match: gi|23619158|ref|NP_705120.1| |
score: 41.97 |
e-value: 0.006 |
Identity: 36.36% |
Span: 189bp (36.5%) |
Frame: 2 |
| gi|23619158|ref|NP_705120.1| cyclophilin, putative [Plasmodium falciparum 3D7] gi|23615365|emb|CAD52356.1| cyclophili... |
| Match: gi|40950447|gb|AAR97857.1| |
score: 40.43 |
e-value: 0.017 |
Identity: 70.83% |
Span: 72bp (13.9%) |
Frame: 2 |
| gi|40950447|gb|AAR97857.1| sans fille [Drosophila arizonae] |
| Match: gi|47682580|gb|AAH70649.1| |
score: 40.05 |
e-value: 0.022 |
Identity: 29.85% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|47682580|gb|AAH70649.1| Unknown (protein for MGC:82187) [Xenopus laevis] |
| Match: gi|29251400|gb|EAA42882.1| |
score: 40.05 |
e-value: 0.022 |
Identity: 29.85% |
Span: 195bp (37.6%) |
Frame: 2 |
| gi|29251400|gb|EAA42882.1| GLP_574_154581_155147 [Giardia lamblia ATCC 50803] |
| Match: gi|6322199|ref|NP_012274.1| |
score: 39.66 |
e-value: 0.028 |
Identity: 29.63% |
Span: 243bp (46.9%) |
Frame: 2 |
| gi|6322199|ref|NP_012274.1| involved in splicing; Msl1p [Saccharomyces cerevisiae] gi|731910|sp|P40567|YIS9_YEAST Hyp... |
| Match: gi|37595358|gb|AAQ94565.1| |
score: 39.28 |
e-value: 0.037 |
Identity: 32.79% |
Span: 174bp (33.6%) |
Frame: 2 |
| gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio] |
| Match: gi|47218419|emb|CAG12690.1| |
score: 39.28 |
e-value: 0.037 |
Identity: 31.37% |
Span: 153bp (29.5%) |
Frame: 2 |
| gi|47218419|emb|CAG12690.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|47212427|emb|CAF93583.1| |
score: 39.28 |
e-value: 0.037 |
Identity: 27.27% |
Span: 189bp (36.5%) |
Frame: 2 |
| gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|15030328|gb|AAH11441.1| |
score: 38.51 |
e-value: 0.063 |
Identity: 32.84% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|15030328|gb|AAH11441.1| RNA binding motif protein, X chromosome retrogene [Mus musculus] gi|26334797|dbj|BAC31099.... |
| Match: gi|542850|pir||S41766 |
score: 38.12 |
e-value: 0.082 |
Identity: 31.34% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human |
| Match: gi|18848317|gb|AAH24208.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 28.57% |
Span: 180bp (34.7%) |
Frame: 2 |
| gi|18848317|gb|AAH24208.1| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] |
| Match: gi|10880789|gb|AAG24388.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 28.57% |
Span: 180bp (34.7%) |
Frame: 2 |
| gi|10880789|gb|AAG24388.1| PP239 protein [Homo sapiens] |
| Match: gi|7022544|dbj|BAA91638.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 28.57% |
Span: 180bp (34.7%) |
Frame: 2 |
| gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens] |
| Match: gi|21314767|ref|NP_149105.2| |
score: 38.12 |
e-value: 0.082 |
Identity: 26.67% |
Span: 261bp (50.4%) |
Frame: 2 |
| gi|21314767|ref|NP_149105.2| MADP-1 protein [Homo sapiens] gi|18490399|gb|AAH22543.1| MADP-1 protein [Homo sapiens] |
| Match: gi|14211667|dbj|BAB56132.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 26.67% |
Span: 261bp (50.4%) |
Frame: 2 |
| gi|14211667|dbj|BAB56132.1| MADP-1 protein [Homo sapiens] |
| Match: gi|34881706|ref|XP_229192.2| |
score: 38.12 |
e-value: 0.082 |
Identity: 31.34% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|34881706|ref|XP_229192.2| similar to heterogeneous nuclear ribonucleoprotein G - human [Rattus norvegicus] |
| Match: gi|47086837|ref|NP_997763.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 32.79% |
Span: 174bp (33.6%) |
Frame: 2 |
| gi|47086837|ref|NP_997763.1| RNA binding motif protein, X-linked [Danio rerio] >gi|29436819|gb|AAH49509.1| Rbmx prote... |
| Match: gi|21361702|ref|NP_060577.2| |
score: 38.12 |
e-value: 0.082 |
Identity: 28.57% |
Span: 180bp (34.7%) |
Frame: 2 |
| gi|21361702|ref|NP_060577.2| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] gi|12803481|gb|AAH02566.1| RN... |
| Match: gi|33873902|gb|AAH10177.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 26.67% |
Span: 261bp (50.4%) |
Frame: 2 |
| gi|33873902|gb|AAH10177.1| MADP-1 protein [Homo sapiens] |
| Match: gi|5579009|emb|CAB51361.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 31.34% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus] |
| Match: gi|34925229|sp|Q86U06|RNP4_HUMAN |
score: 38.12 |
e-value: 0.082 |
Identity: 28.57% |
Span: 180bp (34.7%) |
Frame: 2 |
| gi|34925229|sp|Q86U06|RNP4_HUMAN RNA-binding region containing protein 4 (Splicing factor SF2) (PP239) gi|28071058|em... |
| Match: gi|4504451|ref|NP_002130.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 31.34% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|4504451|ref|NP_002130.1| RNA binding motif protein, X chromosome [Homo sapiens] gi|3256007|emb|CAA80599.1| hnRNP G... |
| Match: gi|23503093|sp|P38159|ROG_HUMAN |
score: 38.12 |
e-value: 0.082 |
Identity: 31.34% |
Span: 192bp (37.1%) |
Frame: 2 |
| gi|23503093|sp|P38159|ROG_HUMAN Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA binding motif protein, X chr... |
|
| 1 lower scoring hits censored -- only 100 best hits are stored. |
