| arabidopsis/peptide [blastx] | Showing best 11 hits recorded |
| Match: At2G34450.1 |
score: 75.5 |
e-value: 6e-14 |
Identity: 76.92% |
Span: 117bp (22.1%) |
Frame: 3 |
| high mobility group (HMG1/2) family protein | chr2:14534997-14536527 REVERSE |
| Match: At2G34450.2 |
score: 70.9 |
e-value: 1e-12 |
Identity: 75% |
Span: 117bp (22.1%) |
Frame: 3 |
| high mobility group (HMG1/2) family protein | chr2:14534997-14536527 REVERSE |
| Match: At4G35570.1 |
score: 54.3 |
e-value: 1e-07 |
Identity: 58.97% |
Span: 117bp (22.1%) |
Frame: 3 |
| Symbols: NFD5, HMGD, NFD05, HMGB5 | HMGB5 (HIGH MOBILITY GROUP B 5); transcription factor | chr4:16887368-16888189 R... |
| Match: At2G17560.2 |
score: 53.9 |
e-value: 2e-07 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| Symbols: NFD4, NFD04, HMGB4 | HMGB4 (HIGH MOBILITY GROUP B 4) | chr2:7649568-7650550 REVERSE |
| Match: At2G17560.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| Symbols: NFD4, NFD04, HMGB4 | HMGB4 (HIGH MOBILITY GROUP B 4); transcription factor | chr2:7649568-7650550 REVERSE |
| Match: At3G51880.1 |
score: 50.8 |
e-value: 2e-06 |
Identity: 34.62% |
Span: 234bp (44.2%) |
Frame: 3 |
| Symbols: NFD1, HMGB1 | HMGB1 (HIGH MOBILITY GROUP B 1); transcription factor | chr3:19258218-19259468 REVERSE |
| Match: At3G51880.2 |
score: 50.8 |
e-value: 2e-06 |
Identity: 34.62% |
Span: 234bp (44.2%) |
Frame: 3 |
| Symbols: NFD1, HMGB1 | HMGB1 (HIGH MOBILITY GROUP B 1) | chr3:19258218-19259468 REVERSE |
| Match: At1G20693.2 |
score: 49.7 |
e-value: 3e-06 |
Identity: 36.51% |
Span: 189bp (35.7%) |
Frame: 3 |
| Symbols: HMG BETA 1, NFD2, NFD02, HMGB2 | HMGB2 (HIGH MOBILITY GROUP B 2) | chr1:7177272-7178477 FORWARD |
| Match: At1G20693.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 36.51% |
Span: 189bp (35.7%) |
Frame: 3 |
| Symbols: HMG BETA 1, NFD2, NFD02, HMGB2 | HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor | chr1:7177272-71784... |
| Match: At1G20696.2 |
score: 45.1 |
e-value: 8e-05 |
Identity: 48.65% |
Span: 111bp (20.9%) |
Frame: 3 |
| Symbols: NFD3, NFD03, HMGB3 | HMGB3 (HIGH MOBILITY GROUP B 3) | chr1:7179815-7181183 FORWARD |
| Match: At1G20696.1 |
score: 45.1 |
e-value: 8e-05 |
Identity: 48.65% |
Span: 111bp (20.9%) |
Frame: 3 |
| Symbols: NFD3, NFD03, HMGB3 | HMGB3 (HIGH MOBILITY GROUP B 3); transcription factor | chr1:7179815-7181164 FORWARD |
|
| 1 lower scoring hits censored -- only 11 best hits are stored. |
| genbank/nr [blastx] | Showing best 15 hits recorded |
| Match: gi|18403553|ref|NP_565788.1| |
score: 75.5 |
e-value: 5e-12 |
Identity: 76.92% |
Span: 117bp (22.1%) |
Frame: 3 |
| high mobility group (HMG1/2) family protein [Arabidopsis thaliana] >gi20197083|gb|AAC26692.2| putative HMG protein [A... |
| Match: gi|79324303|ref|NP_001031480.1| |
score: 70.9 |
e-value: 1e-10 |
Identity: 75% |
Span: 117bp (22.1%) |
Frame: 3 |
| high mobility group (HMG1/2) family protein [Arabidopsis thaliana] |
| Match: gi|56202161|dbj|BAD73639.1| |
score: 68.6 |
e-value: 6e-10 |
Identity: 66.67% |
Span: 117bp (22.1%) |
Frame: 3 |
| HMG protein-like [Oryza sativa Japonica Group] >gi125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sati... |
| Match: gi|15237040|ref|NP_195282.1| |
score: 54.3 |
e-value: 1e-05 |
Identity: 58.97% |
Span: 117bp (22.1%) |
Frame: 3 |
| gi|15237040|ref|NP_195282.1| HMG delta protein [Arabidopsis thaliana] gi|7446230|pir||T04662 high mobility group prot... |
| Match: gi|15227862|ref|NP_179347.1| |
score: 53.9 |
e-value: 1e-05 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| gi|15227862|ref|NP_179347.1| HMG protein -related [Arabidopsis thaliana] gi|25385737|pir||F84553 probable HMG protein... |
| Match: gi|79322411|ref|NP_001031364.1| |
score: 53.9 |
e-value: 1e-05 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| HMGB4 |
| Match: gi|2832355|emb|CAA74403.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| HMG protein [Arabidopsis thaliana] |
| Match: gi|13877775|gb|AAK43965.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| gi|13877775|gb|AAK43965.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|21592453|gb|AAM64404.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 39.71% |
Span: 204bp (38.5%) |
Frame: 3 |
| gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|54291150|dbj|BAD61823.1| |
score: 51.6 |
e-value: 7e-05 |
Identity: 54.05% |
Span: 111bp (20.9%) |
Frame: 3 |
| HMGB1 |
| Match: gi|106879575|emb|CAJ38371.1| |
score: 51.2 |
e-value: 9e-05 |
Identity: 38.24% |
Span: 186bp (35.1%) |
Frame: 3 |
| HMG-protein [Plantago major] |
| Match: gi|436424|emb|CAA54168.1| |
score: 51.2 |
e-value: 9e-05 |
Identity: 39.68% |
Span: 189bp (35.7%) |
Frame: 3 |
| HMG 1 protein [Pisum sativum] |
| Match: gi|47027098|gb|AAT08762.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 54.05% |
Span: 111bp (20.9%) |
Frame: 3 |
| HMG transcription factor [Hyacinthus orientalis] |
| Match: gi|42572635|ref|NP_974413.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 34.62% |
Span: 234bp (44.2%) |
Frame: 3 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|15231065|ref|NP_190756.1| |
score: 50.8 |
e-value: 0.0001 |
Identity: 34.62% |
Span: 234bp (44.2%) |
Frame: 3 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
|
| 33 lower scoring hits censored -- only 15 best hits are stored. |
