| genbank/nr [blastx] | Showing best 26 hits recorded |
| Match: gi|1707370|emb|CAA67799.1| |
score: 63.93 |
e-value: 1.2e-09 |
Identity: 69.44% |
Span: 108bp (20.3%) |
Frame: 2 |
| splicing factor [Arabidopsis thaliana] |
| Match: gi|30696138|ref|NP_851174.1| |
score: 63.93 |
e-value: 1.2e-09 |
Identity: 69.44% |
Span: 108bp (20.3%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi21542447|sp|P92966.2|RSP41... |
| Match: gi|30696140|ref|NP_200017.2| |
score: 63.93 |
e-value: 1.2e-09 |
Identity: 69.44% |
Span: 108bp (20.3%) |
Frame: 2 |
| ATRSP41; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] |
| Match: gi|1667582|gb|AAB18813.1| |
score: 63.54 |
e-value: 1.5e-09 |
Identity: 69.44% |
Span: 108bp (20.3%) |
Frame: 2 |
| splicing factor At-SRp40 [Arabidopsis thaliana] |
| Match: gi|38344865|emb|CAE01291.2| |
score: 62.77 |
e-value: 2.6e-09 |
Identity: 72.22% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15235112|ref|NP_194280.1| |
score: 62.39 |
e-value: 3.4e-09 |
Identity: 66.67% |
Span: 108bp (20.3%) |
Frame: 2 |
| ATRSP35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi4033468|sp|P92965.2|RSP40_... |
| Match: gi|11346383|pir||T47978 |
score: 61.62 |
e-value: 5.8e-09 |
Identity: 75% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|11346383|pir||T47978 splicing factor RSP31 [similarity] - Arabidopsis thaliana gi|6899884|emb|CAB71893.1| ARGININE... |
| Match: gi|11358856|pir||T51304 |
score: 61.62 |
e-value: 5.8e-09 |
Identity: 75% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|11358856|pir||T51304 splicing factor RSp31 [imported] - Arabidopsis thaliana gi|1707366|emb|CAA67798.1| splicing f... |
| Match: gi|18412169|ref|NP_567120.1| |
score: 61.62 |
e-value: 5.8e-09 |
Identity: 75% |
Span: 108bp (20.3%) |
Frame: 2 |
| RSP31; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi26454661|sp|P92964.2|RSP31_A... |
| Match: gi|25386572|pir||F85294 |
score: 60.46 |
e-value: 1.3e-08 |
Identity: 65.71% |
Span: 105bp (19.8%) |
Frame: 2 |
| gi|25386572|pir||F85294 splicing factor At-SRp40 [imported] - Arabidopsis thaliana gi|7269400|emb|CAB81360.1| splicin... |
| Match: gi|15226019|ref|NP_182184.1| |
score: 53.14 |
e-value: 2e-06 |
Identity: 63.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] >gi4415941|gb|AAD20171.1| putative arginine/ser... |
| Match: gi|28461393|gb|AAH46895.1| |
score: 38.89 |
e-value: 0.04 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|28461393|gb|AAH46895.1| Similar to splicing factor, arginine/serine-rich 4 (SRp75) [Danio rerio] |
| Match: gi|1082713|pir||A48133 |
score: 38.12 |
e-value: 0.068 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|1082713|pir||A48133 pre-mRNA splicing SRp75 - human gi|307438|gb|AAA36649.1| pre-mRNA splicing factor |
| Match: gi|21361282|ref|NP_005617.2| |
score: 38.12 |
e-value: 0.068 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|21361282|ref|NP_005617.2| splicing factor, arginine/serine-rich 4 [Homo sapiens] gi|20981726|sp|Q08170|SFR4_HUMAN ... |
| Match: gi|26449170|dbj|BAC36925.1| |
score: 38.12 |
e-value: 0.068 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus] |
| Match: gi|20978758|sp|Q8VE97|SFR4_MOUSE |
score: 38.12 |
e-value: 0.068 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|20978758|sp|Q8VE97|SFR4_MOUSE Splicing factor, arginine/serine-rich 4 gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mu... |
| Match: gi|2914669|gb|AAC04476.1| |
score: 38.12 |
e-value: 0.068 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens] |
| Match: gi|30585347|gb|AAP36946.1| |
score: 38.12 |
e-value: 0.068 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic construct] |
| Match: gi|25150290|ref|NP_499649.2| |
score: 38.12 |
e-value: 0.068 |
Identity: 41.18% |
Span: 102bp (19.2%) |
Frame: 2 |
| gi|25150290|ref|NP_499649.2| serine/aRginine rich pre-mRNA SPlicing factor, SF2, substrate of the SR protein kinase S... |
| Match: gi|11527011|gb|AAG36874.1| |
score: 38.12 |
e-value: 0.068 |
Identity: 41.18% |
Span: 102bp (19.2%) |
Frame: 2 |
| gi|11527011|gb|AAG36874.1| SF2 [Caenorhabditis elegans] |
| Match: gi|2136195|pir||S59043 |
score: 37.74 |
e-value: 0.089 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|2136195|pir||S59043 spliling factor SRp55 - human gi|1049088|gb|AAA93073.1| SRp55-1 |
| Match: gi|20127499|ref|NP_006266.2| |
score: 37.74 |
e-value: 0.089 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|20127499|ref|NP_006266.2| arginine/serine-rich splicing factor 6; splicing factor, arginine/serine-rich, 55 kDa; p... |
| Match: gi|30584231|gb|AAP36364.1| |
score: 37.74 |
e-value: 0.089 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic construct] |
| Match: gi|1049084|gb|AAA93071.1| |
score: 37.74 |
e-value: 0.089 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|1049084|gb|AAA93071.1| SRp55-2 |
| Match: gi|4972267|emb|CAB43961.1| |
score: 37.74 |
e-value: 0.089 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|4972267|emb|CAB43961.1| dJ862K6.2.2 (splicing factor, arginine/serine-rich 6 (SRP55-2)(isoform 2)) [Homo sapiens] |
| Match: gi|1049086|gb|AAA93072.1| |
score: 37.74 |
e-value: 0.089 |
Identity: 38.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| gi|1049086|gb|AAA93072.1| SRp55-3 |
|
| arabidopsis/peptide [blastx] | Showing best 13 hits recorded |
| Match: At5g52040.2 |
score: 63.93 |
e-value: 4.7e-11 |
Identity: 69.44% |
Span: 108bp (20.3%) |
Frame: 2 |
| At5g52040.2 68412.m07957 arginine/serine-rich splicing factor RSp41 |
| Match: At5g52040.1 |
score: 63.93 |
e-value: 4.7e-11 |
Identity: 69.44% |
Span: 108bp (20.3%) |
Frame: 2 |
| At5g52040.1 68412.m07956 arginine/serine-rich splicing factor RSp41 |
| Match: At4g25500.1 |
score: 62.39 |
e-value: 1.4e-10 |
Identity: 66.67% |
Span: 108bp (20.3%) |
Frame: 2 |
| At4g25500.1 68411.m03344 arginine/serine-rich splicing factor RSp40 contains EST gb:T45156, H3766800 |
| Match: At3g61860.1 |
score: 61.62 |
e-value: 2.3e-10 |
Identity: 75% |
Span: 108bp (20.3%) |
Frame: 2 |
| At3g61860.1 68410.m06419 arginine/serine-rich splicing factor, atRSp31 |
| Match: At2g46610.1 |
score: 53.14 |
e-value: 8.3e-08 |
Identity: 63.89% |
Span: 108bp (20.3%) |
Frame: 2 |
| At2g46610.1 68409.m05251 arginine/serine-rich splicing factor RSP31, putative |
| Match: At2g37340.1 |
score: 35.81 |
e-value: 0.014 |
Identity: 48.57% |
Span: 105bp (19.8%) |
Frame: 2 |
| At2g37340.1 68409.m04145 splicing factor RSZ33, putative nearly identical to splicing factor RSZ33 [Arabidopsis thali... |
| Match: At3g53500.2 |
score: 35.81 |
e-value: 0.014 |
Identity: 48.57% |
Span: 105bp (19.8%) |
Frame: 2 |
| At3g53500.2 68410.m05465 splicing factor - like protein splicing factor, arginine/serine-rich 7, Homo sapiens, PIR:A5... |
| Match: At2g16940.1 |
score: 34.27 |
e-value: 0.04 |
Identity: 35.14% |
Span: 111bp (20.9%) |
Frame: 2 |
| At2g16940.1 68409.m01758 RRM-containing protein |
| Match: At4g02430.1 |
score: 33.5 |
e-value: 0.068 |
Identity: 40.54% |
Span: 111bp (20.9%) |
Frame: 2 |
| At4g02430.1 68411.m00300 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At4g02430.2 |
score: 33.5 |
e-value: 0.068 |
Identity: 40.54% |
Span: 111bp (20.9%) |
Frame: 2 |
| At4g02430.2 68411.m00301 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At1g02840.3 |
score: 33.11 |
e-value: 0.088 |
Identity: 37.84% |
Span: 111bp (20.9%) |
Frame: 2 |
| At1g02840.3 68408.m08868 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.1 |
score: 33.11 |
e-value: 0.088 |
Identity: 37.84% |
Span: 111bp (20.9%) |
Frame: 2 |
| At1g02840.1 68408.m08866 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.2 |
score: 33.11 |
e-value: 0.088 |
Identity: 37.84% |
Span: 111bp (20.9%) |
Frame: 2 |
| At1g02840.2 68408.m08867 pre-mRNA splicing factor SF2 (SR1 protein) |
|
