| arabidopsis/peptide [blastx] | Showing best 16 hits recorded |
| Match: At5G06805.1 |
score: 52 |
e-value: 6e-10 |
Identity: 28.92% |
Span: 225bp (41.7%) |
Frame: 3 |
| reverse transcriptase-related | chr5:2106098-2108021 REVERSE |
| Match: At2G22350.1 |
score: 51.6 |
e-value: 3e-09 |
Identity: 34.72% |
Span: 210bp (39.0%) |
Frame: 3 |
| RNase H domain-containing protein | chr2:9503156-9504121 FORWARD |
| Match: At2G27870.1 |
score: 48.9 |
e-value: 3e-09 |
Identity: 34.38% |
Span: 192bp (35.6%) |
Frame: 3 |
| nucleic acid binding / ribonuclease H | chr2:11874328-11875272 REVERSE |
| Match: At5G36905.1 |
score: 48.9 |
e-value: 6e-10 |
Identity: 35.21% |
Span: 213bp (39.5%) |
Frame: 3 |
| RNase H domain-containing protein | chr5:14575028-14577414 FORWARD |
| Match: At1G17390.1 |
score: 48.5 |
e-value: 5e-06 |
Identity: 35.94% |
Span: 192bp (35.6%) |
Frame: 3 |
| nucleic acid binding / ribonuclease H | chr1:5958694-5959512 REVERSE |
| Match: At4G12275.1 |
score: 46.2 |
e-value: 2e-05 |
Identity: 30.3% |
Span: 198bp (36.7%) |
Frame: 3 |
| reverse transcriptase-related | chr4:7300450-7301640 REVERSE |
| Match: At1G43995.1 |
score: 46.2 |
e-value: 2e-05 |
Identity: 35.94% |
Span: 192bp (35.6%) |
Frame: 3 |
| | Symbol: None | expressed protein, similar to putative non-LTR retroelement reverse transcriptase GI:4544460 from (A... |
| Match: At5G33360.1 |
score: 44.7 |
e-value: 7e-05 |
Identity: 33.82% |
Span: 204bp (37.8%) |
Frame: 3 |
| nucleic acid binding / ribonuclease H | chr5:12618370-12618897 FORWARD |
| Match: At4G08860.1 |
score: 43.9 |
e-value: 0.0001 |
Identity: 32.81% |
Span: 192bp (35.6%) |
Frame: 3 |
| nucleic acid binding / ribonuclease H | chr4:5643949-5645042 FORWARD |
| Match: At5G45595.1 |
score: 43.9 |
e-value: 0.0001 |
Identity: 35.42% |
Span: 144bp (26.7%) |
Frame: 3 |
| | Symbol: None | hypothetical protein | chr5:18503902-18504566 REVERSE | Aliases: None |
| Match: At5G42905.1 |
score: 41.2 |
e-value: 6e-06 |
Identity: 31.25% |
Span: 192bp (35.6%) |
Frame: 3 |
| nucleic acid binding / ribonuclease H | chr5:17218642-17219551 REVERSE |
| Match: At5G36905.1 |
score: 32.3 |
e-value: 6e-10 |
Identity: 23.81% |
Span: 315bp (58.4%) |
Frame: 2 |
| RNase H domain-containing protein | chr5:14575028-14577414 FORWARD |
| Match: At2G27870.1 |
score: 30 |
e-value: 3e-09 |
Identity: 25.96% |
Span: 312bp (57.9%) |
Frame: 2 |
| nucleic acid binding / ribonuclease H | chr2:11874328-11875272 REVERSE |
| Match: At5G06805.1 |
score: 29.3 |
e-value: 6e-10 |
Identity: 22.64% |
Span: 312bp (57.9%) |
Frame: 2 |
| reverse transcriptase-related | chr5:2106098-2108021 REVERSE |
| Match: At2G22350.1 |
score: 27.3 |
e-value: 3e-09 |
Identity: 23.7% |
Span: 375bp (69.6%) |
Frame: 2 |
| RNase H domain-containing protein | chr2:9503156-9504121 FORWARD |
| Match: At5G42905.1 |
score: 26.6 |
e-value: 6e-06 |
Identity: 21.7% |
Span: 312bp (57.9%) |
Frame: 2 |
| nucleic acid binding / ribonuclease H | chr5:17218642-17219551 REVERSE |
|
| 17 lower scoring hits censored -- only 16 best hits are stored. |
| genbank/nr [blastx] | Showing best 22 hits recorded |
| Match: gi|53689747|gb|AAU89759.1| |
score: 68.6 |
e-value: 7e-20 |
Identity: 31.76% |
Span: 255bp (47.3%) |
Frame: 2 |
| gi|53689747|gb|AAU89759.1| hypothetical protein [Solanum tuberosum] |
| Match: gi|47824927|gb|AAT38702.1| |
score: 68.6 |
e-value: 7e-20 |
Identity: 31.76% |
Span: 255bp (47.3%) |
Frame: 2 |
| gi|47824927|gb|AAT38702.1| putative RNase H domain containing protein [Solanum demissum] |
| Match: gi|47825035|gb|AAT38805.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 36.56% |
Span: 270bp (50.1%) |
Frame: 3 |
| hypothetical protein SDM1_47t00008 [Solanum demissum] |
| Match: gi|47824927|gb|AAT38702.1| |
score: 52.8 |
e-value: 7e-20 |
Identity: 36.78% |
Span: 261bp (48.4%) |
Frame: 3 |
| gi|47824927|gb|AAT38702.1| putative RNase H domain containing protein [Solanum demissum] |
| Match: gi|53689747|gb|AAU89759.1| |
score: 52.8 |
e-value: 7e-20 |
Identity: 36.78% |
Span: 261bp (48.4%) |
Frame: 3 |
| gi|53689747|gb|AAU89759.1| hypothetical protein [Solanum tuberosum] |
| Match: gi|22326634|ref|NP_680149.1| |
score: 52 |
e-value: 4e-08 |
Identity: 28.92% |
Span: 225bp (41.7%) |
Frame: 3 |
| gi|22326634|ref|NP_680149.1| reverse transcriptase-related [Arabidopsis thaliana] |
| Match: gi|106879579|emb|CAJ38373.1| |
score: 52 |
e-value: 3e-05 |
Identity: 33.8% |
Span: 201bp (37.3%) |
Frame: 3 |
| putative |
| Match: gi|15227192|ref|NP_179822.1| |
score: 51.6 |
e-value: 2e-07 |
Identity: 34.72% |
Span: 210bp (39.0%) |
Frame: 3 |
| gi|15227192|ref|NP_179822.1| RNase H domain-containing protein [Arabidopsis thaliana] gi|25412100|pir||F84611 hypothe... |
| Match: gi|92875335|gb|ABE83336.1| |
score: 50.8 |
e-value: 7e-05 |
Identity: 34.18% |
Span: 225bp (41.7%) |
Frame: 3 |
| Ribonuclease |
| Match: gi|87241451|gb|ABD33309.1| |
score: 50.1 |
e-value: 0.0001 |
Identity: 35.63% |
Span: 261bp (48.4%) |
Frame: 3 |
| Ribonuclease H [Medicago truncatula] |
| Match: gi|9759309|dbj|BAB09815.1| |
score: 50.1 |
e-value: 2e-07 |
Identity: 28.99% |
Span: 207bp (38.4%) |
Frame: 3 |
| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] |
| Match: gi|91805467|gb|ABE65462.1| |
score: 48.9 |
e-value: 2e-07 |
Identity: 34.38% |
Span: 192bp (35.6%) |
Frame: 3 |
| hypothetical protein At2g27870 [Arabidopsis thaliana] |
| Match: gi|15226268|ref|NP_180354.1| |
score: 48.9 |
e-value: 2e-07 |
Identity: 34.38% |
Span: 192bp (35.6%) |
Frame: 3 |
| gi|15226268|ref|NP_180354.1| hypothetical protein [Arabidopsis thaliana] gi|25407930|pir||H84677 hypothetical protein... |
| Match: gi|22327414|ref|NP_680357.1| |
score: 48.9 |
e-value: 4e-08 |
Identity: 35.21% |
Span: 213bp (39.5%) |
Frame: 3 |
| gi|22327414|ref|NP_680357.1| RNase H domain-containing protein [Arabidopsis thaliana] |
| Match: gi|7267526|emb|CAB78008.1| |
score: 40.4 |
e-value: 2e-05 |
Identity: 32.81% |
Span: 192bp (35.6%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] >gi7321072|emb|CAB82119.1| putative protein [Arabidopsis thaliana] |
| Match: gi|22327414|ref|NP_680357.1| |
score: 32.3 |
e-value: 4e-08 |
Identity: 23.81% |
Span: 315bp (58.4%) |
Frame: 2 |
| gi|22327414|ref|NP_680357.1| RNase H domain-containing protein [Arabidopsis thaliana] |
| Match: gi|7267526|emb|CAB78008.1| |
score: 31.6 |
e-value: 2e-05 |
Identity: 25.96% |
Span: 306bp (56.8%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] >gi7321072|emb|CAB82119.1| putative protein [Arabidopsis thaliana] |
| Match: gi|15226268|ref|NP_180354.1| |
score: 30 |
e-value: 2e-07 |
Identity: 25.96% |
Span: 312bp (57.9%) |
Frame: 2 |
| gi|15226268|ref|NP_180354.1| hypothetical protein [Arabidopsis thaliana] gi|25407930|pir||H84677 hypothetical protein... |
| Match: gi|91805467|gb|ABE65462.1| |
score: 30 |
e-value: 2e-07 |
Identity: 25.96% |
Span: 312bp (57.9%) |
Frame: 2 |
| hypothetical protein At2g27870 [Arabidopsis thaliana] |
| Match: gi|9759309|dbj|BAB09815.1| |
score: 29.3 |
e-value: 2e-07 |
Identity: 22.64% |
Span: 312bp (57.9%) |
Frame: 2 |
| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] |
| Match: gi|22326634|ref|NP_680149.1| |
score: 29.3 |
e-value: 4e-08 |
Identity: 22.64% |
Span: 312bp (57.9%) |
Frame: 2 |
| gi|22326634|ref|NP_680149.1| reverse transcriptase-related [Arabidopsis thaliana] |
| Match: gi|15227192|ref|NP_179822.1| |
score: 27.3 |
e-value: 2e-07 |
Identity: 23.7% |
Span: 375bp (69.6%) |
Frame: 2 |
| gi|15227192|ref|NP_179822.1| RNase H domain-containing protein [Arabidopsis thaliana] gi|25412100|pir||F84611 hypothe... |
|
| 97 lower scoring hits censored -- only 22 best hits are stored. |
