| genbank/nr [blastx] | Showing best 30 hits recorded |
| Match: gi|25402598|pir||H86237 |
score: 82.8 |
e-value: 3.3e-15 |
Identity: 64.29% |
Span: 168bp (31.1%) |
Frame: 3 |
| gi|25402598|pir||H86237 protein F14N23.29 [imported] - Arabidopsis thaliana gi|4914343|gb|AAD32891.1| F14N23.29 [Arab... |
| Match: gi|22329468|ref|NP_172510.2| |
score: 82.8 |
e-value: 3.3e-15 |
Identity: 64.29% |
Span: 168bp (31.1%) |
Frame: 3 |
| nucleoporin family protein [Arabidopsis thaliana] >gi79317517|ref|NP_001031018.1| nucleoporin family protein [Arabido... |
| Match: gi|25404873|pir||C96620 |
score: 78.95 |
e-value: 4.7e-14 |
Identity: 68.63% |
Span: 153bp (28.3%) |
Frame: 3 |
| gi|25404873|pir||C96620 protein T30E16.23 [imported] - Arabidopsis thaliana gi|8778749|gb|AAF79757.1| T30E16.23 [Arab... |
| Match: gi|15218866|ref|NP_176175.1| |
score: 78.95 |
e-value: 4.7e-14 |
Identity: 68.63% |
Span: 153bp (28.3%) |
Frame: 3 |
| nucleoporin family protein [Arabidopsis thaliana] |
| Match: gi|34914964|ref|NP_918829.1| |
score: 62.77 |
e-value: 3.5e-09 |
Identity: 56.82% |
Span: 132bp (24.4%) |
Frame: 3 |
| gi|34914964|ref|NP_918829.1| similar to Arabidopsis thaliana chromosome 1, F14N23.29 [Oryza sativa (japonica cultivar... |
| Match: gi|49077938|ref|XP_402773.1| |
score: 46.21 |
e-value: 0.00034 |
Identity: 40.38% |
Span: 156bp (28.8%) |
Frame: 3 |
| gi|49077938|ref|XP_402773.1| hypothetical protein UM05158.1 [Ustilago maydis 521] >gi|46097799|gb|EAK83032.1| hypothe... |
| Match: gi|49096608|ref|XP_409764.1| |
score: 45.44 |
e-value: 0.00058 |
Identity: 35.82% |
Span: 201bp (37.2%) |
Frame: 3 |
| gi|49096608|ref|XP_409764.1| hypothetical protein AN5627.2 [Aspergillus nidulans FGSC A4] >gi|29242989|gb|AAO67348.1|... |
| Match: gi|21264369|ref|NP_624357.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|21264369|ref|NP_624357.1| nucleoporin 98kD isoform 2; Nup98-Nup96 precursor; GLFG-repeat containing nucleoporin [H... |
| Match: gi|26996545|gb|AAH41136.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|26996545|gb|AAH41136.1| Nucleoporin 98kD, isoform 2 [Homo sapiens] |
| Match: gi|21264367|ref|NP_005378.3| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|21264367|ref|NP_005378.3| nucleoporin 98kD isoform 3; Nup98-Nup96 precursor; GLFG-repeat containing nucleoporin [H... |
| Match: gi|4545099|gb|AAD22395.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|4545099|gb|AAD22395.1| Nup98-Nup96 precursor [Homo sapiens] |
| Match: gi|33860189|sp|P52948|NU98_HUMAN |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|33860189|sp|P52948|NU98_HUMAN Nuclear pore complex protein Nup98-Nup96 precursor [Contains: Nuclear pore complex p... |
| Match: gi|18032249|gb|AAL56659.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|18032249|gb|AAL56659.1| NUP196 nucleoporin [Homo sapiens] |
| Match: gi|21264365|ref|NP_057404.2| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| nuclear pore complex protein Nup98-Nup96 isoform 1 [Homo sapiens] |
| Match: gi|1709401|sp|P49793|NU98_RAT |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|1709401|sp|P49793|NU98_RAT Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin) >gi|1363308... |
| Match: gi|11414896|dbj|BAB18537.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|11414896|dbj|BAB18537.1| nucleoporin [Homo sapiens] |
| Match: gi|21264371|ref|NP_624358.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|21264371|ref|NP_624358.1| nucleoporin 98kD isoform 4; Nup98-Nup96 precursor; GLFG-repeat containing nucleoporin [H... |
| Match: gi|4545101|gb|AAD22396.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|4545101|gb|AAD22396.1| Nup98-Nup96 precursor splice variant 1 [Homo sapiens] |
| Match: gi|34784276|gb|AAH57608.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 44.44% |
Span: 135bp (25.0%) |
Frame: 3 |
| gi|34784276|gb|AAH57608.1| Nup98 protein [Mus musculus] |
| Match: gi|46228180|gb|EAK89079.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 48.78% |
Span: 120bp (22.2%) |
Frame: 3 |
| gi|46228180|gb|EAK89079.1| putative nucleoporin, FG-rich motifs within N-terminal region [Cryptosporidium parvum] |
| Match: gi|39584915|emb|CAE64339.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 40.91% |
Span: 132bp (24.4%) |
Frame: 3 |
| gi|39584915|emb|CAE64339.1| Hypothetical protein CBG09022 [Caenorhabditis briggsae] |
| Match: gi|38104264|gb|EAA50858.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 42% |
Span: 150bp (27.7%) |
Frame: 3 |
| gi|38104264|gb|EAA50858.1| hypothetical protein MG04617.4 [Magnaporthe grisea 70-15] |
| Match: gi|47221444|emb|CAF97362.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 42.22% |
Span: 135bp (25.0%) |
Frame: 3 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|30699531|ref|NP_178183.2| |
score: 42.36 |
e-value: 0.005 |
Identity: 43.9% |
Span: 123bp (22.7%) |
Frame: 3 |
| SAR3 (SUPPRESSOR OF AUXIN RESISTANCE 3); porin [Arabidopsis thaliana] >gi22652299|gb|AAN03676.1|AF411839_1 putative n... |
| Match: gi|22652297|gb|AAN03675.1| |
score: 42.36 |
e-value: 0.005 |
Identity: 43.9% |
Span: 123bp (22.7%) |
Frame: 3 |
| gi|22652297|gb|AAN03675.1| putative nucleoporin PRECOZ [Arabidopsis thaliana] |
| Match: gi|25406684|pir||B96839 |
score: 42.36 |
e-value: 0.005 |
Identity: 43.9% |
Span: 123bp (22.7%) |
Frame: 3 |
| gi|25406684|pir||B96839 hypothetical protein F23A5.3 [imported] - Arabidopsis thaliana gi|1297187|gb|AAA98914.1| simi... |
| Match: gi|45198460|ref|NP_985489.1| |
score: 42.36 |
e-value: 0.005 |
Identity: 35.59% |
Span: 177bp (32.7%) |
Frame: 3 |
| gi|45198460|ref|NP_985489.1| AFL059Cp [Eremothecium gossypii] >gi|44984411|gb|AAS53313.1| AFL059Cp [Eremothecium goss... |
| Match: gi|19115005|ref|NP_594093.1| |
score: 42.36 |
e-value: 0.005 |
Identity: 40% |
Span: 150bp (27.7%) |
Frame: 3 |
| gi|19115005|ref|NP_594093.1| putative nucleoporin [Schizosaccharomyces pombe] gi|26396947|sp|Q9UTK4|N189_SCHPO Nucleo... |
| Match: gi|32407085|ref|XP_324141.1| |
score: 41.97 |
e-value: 0.006 |
Identity: 42.59% |
Span: 162bp (29.9%) |
Frame: 3 |
| gi|32407085|ref|XP_324141.1| hypothetical protein [Neurospora crassa] gi|25466261|pir||T51890 related to Nup98-Nup96 ... |
| Match: gi|27948820|gb|AAO25607.1| |
score: 41.59 |
e-value: 0.008 |
Identity: 32.14% |
Span: 168bp (31.1%) |
Frame: 3 |
| gi|27948820|gb|AAO25607.1| NUP145 [Candida glabrata] |
|
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At1g10390.1 |
score: 82.8 |
e-value: 1.1e-16 |
Identity: 64.29% |
Span: 168bp (31.1%) |
Frame: 3 |
| At1g10390.1 68408.m01057 expressed protein similar to T cell receptor beta chain CDR3 (gi|3064031); similar to nucleo... |
| Match: At1g59660.1 |
score: 78.95 |
e-value: 1.5e-15 |
Identity: 68.63% |
Span: 153bp (28.3%) |
Frame: 3 |
| At1g59660.1 68408.m06151 nucleoporin 98-related protein similar to nucleoporin 98 GB:AAC50366 GI:1184173 from [Homo s... |
| Match: At1g80680.1 |
score: 42.36 |
e-value: 0.00016 |
Identity: 43.9% |
Span: 123bp (22.7%) |
Frame: 3 |
| At1g80680.1 68408.m08665 nucleoporin PRECOZ (PRE) annotation temporarily based on supporting cDNA gi|22652298|gb|AF41... |
|
