| genbank/nr [blastx] | Showing best 39 hits recorded |
| Match: gi|15223967|ref|NP_177871.1| |
score: 159.1 |
e-value: 3.3e-38 |
Identity: 74.26% |
Span: 303bp (53.8%) |
Frame: 2 |
| replication factor C 36 kDA, putative [Arabidopsis thaliana] >gi12323400|gb|AAG51681.1|AC010704_25 putative replicati... |
| Match: gi|10798790|dbj|BAB16439.1| |
score: 152.1 |
e-value: 4e-36 |
Identity: 70.75% |
Span: 300bp (53.3%) |
Frame: 2 |
| replication factor C 36kDa subunit [Oryza sativa Japonica Group] |
| Match: gi|6677723|ref|NP_031396.1| |
score: 101.3 |
e-value: 8.1e-21 |
Identity: 48% |
Span: 300bp (53.3%) |
Frame: 2 |
| replication factor C subunit 5 isoform 1 [Homo sapiens] >gi728777|sp|P40937.1|RFC5_HUMAN RecName: Full=Replication fa... |
| Match: gi|31795540|ref|NP_853556.1| |
score: 101.3 |
e-value: 8.1e-21 |
Identity: 48% |
Span: 300bp (53.3%) |
Frame: 2 |
| gi|31795540|ref|NP_853556.1| replication factor C 5 isoform 2; RFC, 36.5 kD subunit; activator 1 36 kDa subunit; A1 3... |
| Match: gi|20841441|ref|XP_132348.1| |
score: 99.75 |
e-value: 2.4e-20 |
Identity: 49% |
Span: 300bp (53.3%) |
Frame: 2 |
| gi|20841441|ref|XP_132348.1| replication factor C 5 [Mus musculus] gi|30913281|sp|Q9D0F6|RFC5_MOUSE Activator 1 36 kD... |
| Match: gi|23271821|gb|AAH23674.1| |
score: 99.75 |
e-value: 2.4e-20 |
Identity: 49% |
Span: 300bp (53.3%) |
Frame: 2 |
| Rfc5 protein [Mus musculus] |
| Match: gi|27882432|gb|AAH44712.1| |
score: 97.83 |
e-value: 9e-20 |
Identity: 50% |
Span: 300bp (53.3%) |
Frame: 2 |
| gi|27882432|gb|AAH44712.1| Rfc5-prov protein [Xenopus laevis] |
| Match: gi|31210123|ref|XP_314028.1| |
score: 82.8 |
e-value: 3e-15 |
Identity: 42.86% |
Span: 291bp (51.7%) |
Frame: 2 |
| gi|31210123|ref|XP_314028.1| ENSANGP00000009970 [Anopheles gambiae] gi|21297309|gb|EAA09454.1| ENSANGP00000009970 [An... |
| Match: gi|34869552|ref|XP_223877.2| |
score: 76.64 |
e-value: 2.1e-13 |
Identity: 44.09% |
Span: 279bp (49.6%) |
Frame: 2 |
| gi|34869552|ref|XP_223877.2| similar to replication factor C 5 isoform 1; RFC, 36.5 kD subunit; activator 1 36 kDa su... |
| Match: gi|34872605|ref|XP_222214.2| |
score: 67.4 |
e-value: 1.3e-10 |
Identity: 30.82% |
Span: 300bp (53.3%) |
Frame: 2 |
| gi|34872605|ref|XP_222214.2| similar to replication factor C 5 isoform 1; RFC, 36.5 kD subunit; activator 1 36 kDa su... |
| Match: gi|13431787|sp|O14003|RFC3_SCHPO |
score: 65.85 |
e-value: 3.8e-10 |
Identity: 31.82% |
Span: 264bp (46.9%) |
Frame: 2 |
| gi|13431787|sp|O14003|RFC3_SCHPO Activator 1 subunit 3 (Replication factor C subunit 3) (Replication factor C3) gi|11... |
| Match: gi|19115323|ref|NP_594411.1| |
score: 65.85 |
e-value: 3.8e-10 |
Identity: 31.82% |
Span: 264bp (46.9%) |
Frame: 2 |
| gi|19115323|ref|NP_594411.1| replication factor 3 subunit [Schizosaccharomyces pombe] gi|4494101|emb|CAB39134.1| rfc3... |
| Match: gi|19921076|ref|NP_609399.1| |
score: 62.39 |
e-value: 4.2e-09 |
Identity: 39.33% |
Span: 264bp (46.9%) |
Frame: 2 |
| gi|19921076|ref|NP_609399.1| CG5313-PA [Drosophila melanogaster] gi|7533196|gb|AAF63387.1| replication factor C subun... |
| Match: gi|17553436|ref|NP_498750.1| |
score: 57.38 |
e-value: 1.3e-07 |
Identity: 31.07% |
Span: 300bp (53.3%) |
Frame: 2 |
| gi|17553436|ref|NP_498750.1| replication factor C 5, possibly N-myristoylated (3J118) [Caenorhabditis elegans] gi|309... |
| Match: gi|630627|pir||S44809 |
score: 56.22 |
e-value: 3e-07 |
Identity: 31.58% |
Span: 276bp (49.0%) |
Frame: 2 |
| gi|630627|pir||S44809 F44B9.8 protein - Caenorhabditis elegans |
| Match: gi|6324039|ref|NP_014109.1| |
score: 51.6 |
e-value: 7.4e-06 |
Identity: 26.14% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|6324039|ref|NP_014109.1| RFC is a DNA binding protein and ATPase that acts as a processivity factor for DNA polyme... |
| Match: gi|32417990|ref|XP_329473.1| |
score: 48.91 |
e-value: 4.8e-05 |
Identity: 28.41% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|32417990|ref|XP_329473.1| hypothetical protein [Neurospora crassa] gi|28881264|emb|CAD70523.1| related to replicat... |
| Match: gi|20093446|ref|NP_613293.1| |
score: 48.52 |
e-value: 6.2e-05 |
Identity: 28.24% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|20093446|ref|NP_613293.1| Replication factor C (ATPase involved in DNA replication) intein containing [Methanopyru... |
| Match: gi|15920690|ref|NP_376359.1| |
score: 48.14 |
e-value: 8.2e-05 |
Identity: 29.07% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|15920690|ref|NP_376359.1| 327aa long hypothetical replication factor C small subunit [Sulfolobus tokodaii] gi|1562... |
| Match: gi|13542322|ref|NP_112010.1| |
score: 46.98 |
e-value: 0.00018 |
Identity: 27.38% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|13542322|ref|NP_112010.1| ATPase involved in DNA replication [Thermoplasma volcanium] |
| Match: gi|14325757|dbj|BAB60660.1| |
score: 46.98 |
e-value: 0.00018 |
Identity: 27.38% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|14325757|dbj|BAB60660.1| replication factor C subunit [Thermoplasma volcanium] |
| Match: gi|15791090|ref|NP_280914.1| |
score: 46.98 |
e-value: 0.00018 |
Identity: 27.06% |
Span: 255bp (45.3%) |
Frame: 2 |
| gi|15791090|ref|NP_280914.1| replication factor C small subunit; RfcA [Halobacterium sp. NRC-1] gi|25301745|pir||F843... |
| Match: gi|30913228|sp|O74111|RFC3_ARXAD |
score: 46.59 |
e-value: 0.00024 |
Identity: 26.09% |
Span: 276bp (49.0%) |
Frame: 2 |
| gi|30913228|sp|O74111|RFC3_ARXAD Activator 1 subunit 3 (Replication factor C subunit 3) (Replication factor C3) gi|33... |
| Match: gi|14520328|ref|NP_125803.1| |
score: 46.59 |
e-value: 0.00024 |
Identity: 26.44% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|14520328|ref|NP_125803.1| activator 1, replication factor C, small subunit [Pyrococcus abyssi] gi|7514225|pir||C75... |
| Match: gi|18312140|ref|NP_558807.1| |
score: 46.59 |
e-value: 0.00024 |
Identity: 26.19% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|18312140|ref|NP_558807.1| replication factor C small subunit [Pyrobaculum aerophilum] gi|18159573|gb|AAL62989.1| r... |
| Match: gi|14590058|ref|NP_142122.1| |
score: 46.21 |
e-value: 0.00031 |
Identity: 26.44% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|14590058|ref|NP_142122.1| replication factor C subunit [Pyrococcus horikoshii] gi|7521348|pir||F71231 probable rep... |
| Match: gi|15988297|pdb|1IQP|A |
score: 44.28 |
e-value: 0.001 |
Identity: 26.44% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|15988297|pdb|1IQP|A Chain A, Crystal Structure Of The Clamp Loader Small Subunit From Pyrococcus Furiosus gi|15988... |
| Match: gi|18976465|ref|NP_577822.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 26.44% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|18976465|ref|NP_577822.1| replication factor C, small subunit [Pyrococcus furiosus DSM 3638] gi|18892004|gb|AAL802... |
| Match: gi|9453897|dbj|BAB03292.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 26.44% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|9453897|dbj|BAB03292.1| replication factor C small subunit precursor [Pyrococcus furiosus] |
| Match: gi|16082630|ref|NP_394950.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 27.38% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|16082630|ref|NP_394950.1| ATPase involved in DNA replication [Thermoplasma acidophilum] |
| Match: gi|10640840|emb|CAC12618.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 27.38% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|10640840|emb|CAC12618.1| probable replication factor C, 40 KD subunit [Thermoplasma acidophilum] |
| Match: gi|14601459|ref|NP_147997.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 24.72% |
Span: 261bp (46.4%) |
Frame: 2 |
| gi|14601459|ref|NP_147997.1| replication factor C subunit [Aeropyrum pernix] gi|7444555|pir||C72633 probable replicat... |
| Match: gi|11499642|ref|NP_070884.1| |
score: 41.97 |
e-value: 0.006 |
Identity: 22.62% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|11499642|ref|NP_070884.1| activator 1, replication factor C, 35 KD subunit [Archaeoglobus fulgidus DSM 4304] gi|74... |
| Match: gi|19073950|ref|NP_584556.1| |
score: 41.59 |
e-value: 0.008 |
Identity: 43.24% |
Span: 111bp (19.7%) |
Frame: 2 |
| gi|19073950|ref|NP_584556.1| DNA REPLICATION FACTOR C (ACTIVATOR 1) SUBUNIT [Encephalitozoon cuniculi] gi|19068592|em... |
| Match: gi|23479189|gb|EAA16086.1| |
score: 41.2 |
e-value: 0.01 |
Identity: 28.42% |
Span: 285bp (50.6%) |
Frame: 2 |
| gi|23479189|gb|EAA16086.1| replication factor C3 [Plasmodium yoelii yoelii] |
| Match: gi|23052253|ref|ZP_00078916.1| |
score: 39.66 |
e-value: 0.029 |
Identity: 25.53% |
Span: 258bp (45.8%) |
Frame: 2 |
| gi|23052253|ref|ZP_00078916.1| COG0470: ATPase involved in DNA replication [Methanosarcina barkeri] |
| Match: gi|20089555|ref|NP_615630.1| |
score: 39.66 |
e-value: 0.029 |
Identity: 24.49% |
Span: 270bp (48.0%) |
Frame: 2 |
| gi|20089555|ref|NP_615630.1| replication factor C, small subunit [Methanosarcina acetivorans str. C2A] gi|19914469|gb... |
| Match: gi|38349727|ref|NP_941563.1| |
score: 38.89 |
e-value: 0.049 |
Identity: 17.86% |
Span: 252bp (44.8%) |
Frame: 2 |
| gi|38349727|ref|NP_941563.1| ATPase involved in DNA replication [Nanoarchaeum equitans Kin4-M] |
| Match: gi|21227923|ref|NP_633845.1| |
score: 38.12 |
e-value: 0.084 |
Identity: 22.45% |
Span: 270bp (48.0%) |
Frame: 2 |
| gi|21227923|ref|NP_633845.1| replication factor C subunit [Methanosarcina mazei Goe1] gi|20906344|gb|AAM31517.1| repl... |
|
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1g77470.1 |
score: 159.1 |
e-value: 1.3e-39 |
Identity: 74.26% |
Span: 303bp (53.8%) |
Frame: 2 |
| At1g77470.1 68408.m08280 replication factor C -related similar to replication factor C GB:P40937 [Homo sapiens] |
|
