| arabidopsis/peptide [blastx] | Showing best 11 hits recorded |
| Match: At5G49665.1 |
score: 157 |
e-value: 4e-39 |
Identity: 51.79% |
Span: 555bp (98.4%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr5:20184345-20186646 REVERSE |
| Match: At2G22680.1 |
score: 149 |
e-value: 1e-36 |
Identity: 51.43% |
Span: 507bp (89.9%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:9652513-9654564 FORWARD |
| Match: At4G37890.1 |
score: 147 |
e-value: 3e-36 |
Identity: 50% |
Span: 516bp (91.5%) |
Frame: -3 |
| Symbols: EDA40 | EDA40 (embryo sac development arrest 40); protein binding / ubiquitin-protein ligase/ zinc ion bind... |
| Match: At4G37890.2 |
score: 147 |
e-value: 3e-36 |
Identity: 50% |
Span: 516bp (91.5%) |
Frame: -3 |
| Symbols: EDA40 | EDA40 (embryo sac development arrest 40); protein binding / ubiquitin-protein ligase/ zinc ion bind... |
| Match: At5G65683.1 |
score: 125 |
e-value: 2e-29 |
Identity: 45.11% |
Span: 525bp (93.1%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr5:26278698-26280930 FORWARD |
| Match: At3G54780.2 |
score: 71.6 |
e-value: 3e-13 |
Identity: 33.99% |
Span: 447bp (79.3%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:20289963-20292407 FORWARD |
| Match: At3G54780.3 |
score: 71.6 |
e-value: 3e-13 |
Identity: 33.99% |
Span: 447bp (79.3%) |
Frame: -3 |
| protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:20289963-20292407 FORWARD |
| Match: At3G54780.1 |
score: 71.2 |
e-value: 4e-13 |
Identity: 34% |
Span: 438bp (77.7%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr3:20289963-20292407 FORWARD |
| Match: At2G38970.1 |
score: 68.6 |
e-value: 2e-12 |
Identity: 28.88% |
Span: 471bp (83.5%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr2:16281213-16283729 FORWARD |
| Match: At1G08050.1 |
score: 62.4 |
e-value: 2e-10 |
Identity: 28.44% |
Span: 525bp (93.1%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr1:2499085-2501308 REVERSE |
| Match: At5G60710.1 |
score: 60.5 |
e-value: 6e-10 |
Identity: 30.73% |
Span: 504bp (89.4%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein | chr5:24428179-24432075 REVERSE |
|
| genbank/nr [blastx] | Showing best 32 hits recorded |
| Match: gi|110740106|dbj|BAF01954.1| |
score: 157 |
e-value: 2e-37 |
Identity: 51.79% |
Span: 555bp (98.4%) |
Frame: -3 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|22327670|ref|NP_680410.1| |
score: 157 |
e-value: 2e-37 |
Identity: 51.79% |
Span: 555bp (98.4%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi8978263|dbj|BAA98154.1| retroelement po... |
| Match: gi|15227277|ref|NP_179853.1| |
score: 149 |
e-value: 8e-35 |
Identity: 51.43% |
Span: 507bp (89.9%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi4314365|gb|AAD15576.1| copia-like retro... |
| Match: gi|30691615|ref|NP_195502.2| |
score: 147 |
e-value: 2e-34 |
Identity: 50% |
Span: 516bp (91.5%) |
Frame: -3 |
| EDA40 (embryo sac development arrest 40); protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis t... |
| Match: gi|26449697|dbj|BAC41972.1| |
score: 147 |
e-value: 2e-34 |
Identity: 50% |
Span: 516bp (91.5%) |
Frame: -3 |
| unknown protein [Arabidopsis thaliana] >gi29029038|gb|AAO64898.1| At4g37890 [Arabidopsis thaliana] |
| Match: gi|7270772|emb|CAB80454.1| |
score: 147 |
e-value: 2e-34 |
Identity: 50% |
Span: 516bp (91.5%) |
Frame: -3 |
| putative |
| Match: gi|30691621|ref|NP_849514.1| |
score: 147 |
e-value: 2e-34 |
Identity: 50% |
Span: 516bp (91.5%) |
Frame: -3 |
| EDA40 (embryo sac development arrest 40); protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis t... |
| Match: gi|2827718|emb|CAA16691.1| |
score: 125 |
e-value: 1e-27 |
Identity: 45.11% |
Span: 525bp (93.1%) |
Frame: -3 |
| retrotransposon - like protein [Arabidopsis thaliana] >gi10177325|dbj|BAB10674.1| copia-like retroelement pol polypro... |
| Match: gi|22328081|ref|NP_680467.1| |
score: 125 |
e-value: 1e-27 |
Identity: 45.11% |
Span: 525bp (93.1%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi110737031|dbj|BAF00470.1| hypothetical ... |
| Match: gi|26450631|dbj|BAC42427.1| |
score: 123 |
e-value: 5e-27 |
Identity: 44.57% |
Span: 525bp (93.1%) |
Frame: -3 |
| unknown protein [Arabidopsis thaliana] >gi29029032|gb|AAO64895.1| At5g65683 [Arabidopsis thaliana] |
| Match: gi|50921175|ref|XP_470948.1| |
score: 103 |
e-value: 3e-21 |
Identity: 43.16% |
Span: 510bp (90.4%) |
Frame: -3 |
| gi|50921175|ref|XP_470948.1| B1160F02.17 [Oryza sativa (japonica cultivar-group)] >gi|38567696|emb|CAE75986.1| B1160F... |
| Match: gi|38344761|emb|CAE01578.2| |
score: 103 |
e-value: 3e-21 |
Identity: 43.16% |
Span: 510bp (90.4%) |
Frame: -3 |
| OSJNBa0068L06.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|90265049|emb|CAH67645.1| |
score: 103 |
e-value: 3e-21 |
Identity: 43.16% |
Span: 510bp (90.4%) |
Frame: -3 |
| H0102C09.6 [Oryza sativa (indica cultivar-group)] |
| Match: gi|79315048|ref|NP_001030861.1| |
score: 71.6 |
e-value: 2e-11 |
Identity: 33.99% |
Span: 447bp (79.3%) |
Frame: -3 |
| protein |
| Match: gi|79607904|ref|NP_974433.2| |
score: 71.6 |
e-value: 2e-11 |
Identity: 33.99% |
Span: 447bp (79.3%) |
Frame: -3 |
| protein |
| Match: gi|28393354|gb|AAO42101.1| |
score: 71.2 |
e-value: 2e-11 |
Identity: 34% |
Span: 438bp (77.7%) |
Frame: -3 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|30694117|ref|NP_191038.2| |
score: 71.2 |
e-value: 2e-11 |
Identity: 34% |
Span: 438bp (77.7%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] |
| Match: gi|7258382|emb|CAB77598.1| |
score: 71.2 |
e-value: 2e-11 |
Identity: 34% |
Span: 438bp (77.7%) |
Frame: -3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|18700173|gb|AAL77698.1| |
score: 68.6 |
e-value: 1e-10 |
Identity: 28.88% |
Span: 471bp (83.5%) |
Frame: -3 |
| At2g38970/T7F6.14 [Arabidopsis thaliana] |
| Match: gi|3928084|gb|AAC79610.1| |
score: 68.6 |
e-value: 1e-10 |
Identity: 28.88% |
Span: 471bp (83.5%) |
Frame: -3 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|30687725|ref|NP_850306.1| |
score: 68.6 |
e-value: 1e-10 |
Identity: 28.88% |
Span: 471bp (83.5%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] |
| Match: gi|50915670|ref|XP_468299.1| |
score: 64.7 |
e-value: 2e-09 |
Identity: 34.64% |
Span: 450bp (79.8%) |
Frame: -3 |
| gi|50915670|ref|XP_468299.1| zinc finger-like [Oryza sativa (japonica cultivar-group)] >gi|47497349|dbj|BAD19389.1| z... |
| Match: gi|15451571|gb|AAK98695.1| |
score: 64.7 |
e-value: 2e-09 |
Identity: 34.64% |
Span: 450bp (79.8%) |
Frame: -3 |
| gi|15451571|gb|AAK98695.1| Hypothetical protein protein containing a von Willebrand factor type A domain [Oryza sativa] |
| Match: gi|15223093|ref|NP_172283.1| |
score: 62.4 |
e-value: 1e-08 |
Identity: 28.44% |
Span: 525bp (93.1%) |
Frame: -3 |
| gi|15223093|ref|NP_172283.1| zinc finger (C3HC4-type RING finger) protein family [Arabidopsis thaliana] gi|8778841|gb... |
| Match: gi|27754463|gb|AAO22679.1| |
score: 62.4 |
e-value: 1e-08 |
Identity: 28.44% |
Span: 525bp (93.1%) |
Frame: -3 |
| gi|27754463|gb|AAO22679.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|15239414|ref|NP_200879.1| |
score: 60.5 |
e-value: 4e-08 |
Identity: 30.73% |
Span: 504bp (89.4%) |
Frame: -3 |
| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] >gi9759335|dbj|BAB09844.1| retroelement po... |
| Match: gi|23198328|gb|AAN15691.1| |
score: 60.5 |
e-value: 4e-08 |
Identity: 30.73% |
Span: 504bp (89.4%) |
Frame: -3 |
| gi|23198328|gb|AAN15691.1| putative protein [Arabidopsis thaliana] >gi|21539497|gb|AAM53301.1| putative protein [Arab... |
| Match: gi|50910591|ref|XP_466784.1| |
score: 58.5 |
e-value: 1e-07 |
Identity: 27.54% |
Span: 537bp (95.2%) |
Frame: -3 |
| gi|50910591|ref|XP_466784.1| zinc finger (C3HC4-type RING finger)-like protein [Oryza sativa (japonica cultivar-group... |
| Match: gi|50926352|ref|XP_473123.1| |
score: 52.8 |
e-value: 8e-06 |
Identity: 26.38% |
Span: 411bp (72.9%) |
Frame: -3 |
| gi|50926352|ref|XP_473123.1| OSJNBa0043L24.22 [Oryza sativa (japonica cultivar-group)] >gi|32489531|emb|CAE04734.1| O... |
| Match: gi|50940729|ref|XP_479892.1| |
score: 51.6 |
e-value: 2e-05 |
Identity: 24.88% |
Span: 552bp (97.9%) |
Frame: -3 |
| gi|50940729|ref|XP_479892.1| zinc finger (C3HC4-type RING finger) protein family-like [Oryza sativa (japonica cultiva... |
| Match: gi|37535178|ref|NP_921891.1| |
score: 50.8 |
e-value: 3e-05 |
Identity: 30% |
Span: 435bp (77.1%) |
Frame: -3 |
| gi|37535178|ref|NP_921891.1| unknown protein [Oryza sativa (japonica cultivar-group)] gi|22758319|gb|AAN05523.1| unkn... |
| Match: gi|110289213|gb|AAP54178.2| |
score: 50.8 |
e-value: 3e-05 |
Identity: 30% |
Span: 435bp (77.1%) |
Frame: -3 |
| von |
|
| 4 lower scoring hits censored -- only 32 best hits are stored. |
