| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5G30510.1 |
score: 213 |
e-value: 6e-56 |
Identity: 58.38% |
Span: 528bp (92.5%) |
Frame: 2 |
| Symbols: ARRPS1, RPS1 | RPS1 (ribosomal protein S1); RNA binding | chr5:11636492-11638453 REVERSE |
|
| genbank/nr [blastx] | Showing best 46 hits recorded |
| Match: gi|18060|emb|CAA46927.1| |
score: 216 |
e-value: 4e-55 |
Identity: 63.69% |
Span: 528bp (92.5%) |
Frame: 2 |
| gi|18060|emb|CAA46927.1| ribosomal protein S1 [Spinacia oleracea] >gi|322404|pir||A44121 ribosomal protein S1 precurs... |
| Match: gi|30692346|ref|NP_850903.1| |
score: 213 |
e-value: 4e-54 |
Identity: 58.38% |
Span: 528bp (92.5%) |
Frame: 2 |
| RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi13877939|gb|A... |
| Match: gi|108707824|gb|ABF95619.1| |
score: 137 |
e-value: 3e-31 |
Identity: 43.18% |
Span: 528bp (92.5%) |
Frame: 2 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1255... |
| Match: gi|108707823|gb|ABF95618.1| |
score: 137 |
e-value: 3e-31 |
Identity: 43.18% |
Span: 528bp (92.5%) |
Frame: 2 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|78169727|gb|ABB26824.1| |
score: 84.3 |
e-value: 3e-15 |
Identity: 33.09% |
Span: 399bp (69.9%) |
Frame: 2 |
| RNA |
| Match: gi|110169091|gb|ABG53631.1| |
score: 83.6 |
e-value: 4e-15 |
Identity: 44% |
Span: 300bp (52.5%) |
Frame: 2 |
| RNA |
| Match: gi|78712202|gb|ABB49379.1| |
score: 82 |
e-value: 1e-14 |
Identity: 38.38% |
Span: 297bp (52.0%) |
Frame: 2 |
| gi|78712202|gb|ABB49379.1| RNA binding S1 [Prochlorococcus marinus str. MIT 9312] |
| Match: gi|33863935|ref|NP_895495.1| |
score: 81.6 |
e-value: 2e-14 |
Identity: 37.37% |
Span: 297bp (52.0%) |
Frame: 2 |
| 30S ribosomal protein S1 [Prochlorococcus marinus str. MIT 9313] >gi33635519|emb|CAE21843.1| 30S ribosomal protein S1... |
| Match: gi|16330162|ref|NP_440890.1| |
score: 81.6 |
e-value: 2e-14 |
Identity: 41.67% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|16330162|ref|NP_440890.1| 30S ribosomal protein S1 [Synechocystis sp. PCC 6803] gi|2500385|sp|P73530|RS1A_SYNY3 30... |
| Match: gi|87300975|ref|ZP_01083817.1| |
score: 81.3 |
e-value: 2e-14 |
Identity: 38.78% |
Span: 294bp (51.5%) |
Frame: 2 |
| 30S ribosomal protein S1 [Synechococcus sp. WH 5701] >gi87284846|gb|EAQ76798.1| 30S ribosomal protein S1 [Synechococc... |
| Match: gi|86607005|ref|YP_475768.1| |
score: 80.9 |
e-value: 3e-14 |
Identity: 44.79% |
Span: 288bp (50.4%) |
Frame: 2 |
| ribosomal |
| Match: gi|23128852|ref|ZP_00110690.1| |
score: 80.9 |
e-value: 3e-14 |
Identity: 43.75% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|23128852|ref|ZP_00110690.1| COG0539: Ribosomal protein S1 [Nostoc punctiforme] |
| Match: gi|75907727|ref|YP_322023.1| |
score: 80.5 |
e-value: 4e-14 |
Identity: 43.75% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|75907727|ref|YP_322023.1| RNA binding S1 [Anabaena variabilis ATCC 29413] >gi|75701452|gb|ABA21128.1| RNA binding ... |
| Match: gi|17135114|dbj|BAB77660.1| |
score: 80.5 |
e-value: 4e-14 |
Identity: 43.75% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|17135114|dbj|BAB77660.1| 30S ribosomal protein S1 [Nostoc sp. PCC 7120] >gi|25311779|pir||AH1823 30S ribosomal pro... |
| Match: gi|84518606|ref|ZP_01005955.1| |
score: 80.5 |
e-value: 4e-14 |
Identity: 36.19% |
Span: 315bp (55.2%) |
Frame: 2 |
| 30S |
| Match: gi|91070108|gb|ABE11032.1| |
score: 80.1 |
e-value: 5e-14 |
Identity: 39.8% |
Span: 294bp (51.5%) |
Frame: 2 |
| 30S |
| Match: gi|33866517|ref|NP_898076.1| |
score: 80.1 |
e-value: 5e-14 |
Identity: 35.24% |
Span: 315bp (55.2%) |
Frame: 2 |
| gi|33866517|ref|NP_898076.1| 30S ribosomal protein S1, homolog A [Synechococcus sp. WH 8102] gi|33633295|emb|CAE08500... |
| Match: gi|88807804|ref|ZP_01123315.1| |
score: 79.7 |
e-value: 6e-14 |
Identity: 35.24% |
Span: 315bp (55.2%) |
Frame: 2 |
| 30S |
| Match: gi|78196477|gb|ABB34242.1| |
score: 79.7 |
e-value: 6e-14 |
Identity: 34.29% |
Span: 315bp (55.2%) |
Frame: 2 |
| RNA |
| Match: gi|86609793|ref|YP_478555.1| |
score: 79.7 |
e-value: 6e-14 |
Identity: 43.75% |
Span: 288bp (50.4%) |
Frame: 2 |
| ribosomal |
| Match: gi|87124899|ref|ZP_01080746.1| |
score: 79.3 |
e-value: 8e-14 |
Identity: 34.29% |
Span: 315bp (55.2%) |
Frame: 2 |
| RNA |
| Match: gi|56750845|ref|YP_171546.1| |
score: 79.3 |
e-value: 8e-14 |
Identity: 40% |
Span: 300bp (52.5%) |
Frame: 2 |
| gi|56750845|ref|YP_171546.1| 30S ribosomal protein S1 [Synechococcus elongatus PCC 6301] >gi|56685804|dbj|BAD79026.1|... |
| Match: gi|91069895|gb|ABE10824.1| |
score: 79 |
e-value: 1e-13 |
Identity: 38.78% |
Span: 294bp (51.5%) |
Frame: 2 |
| 30S |
| Match: gi|33860870|ref|NP_892431.1| |
score: 78.6 |
e-value: 1e-13 |
Identity: 36.89% |
Span: 309bp (54.1%) |
Frame: 2 |
| gi|33860870|ref|NP_892431.1| 30S ribosomal protein S1, homolog A [Prochlorococcus marinus subsp. pastoris str. CCMP13... |
| Match: gi|67923044|ref|ZP_00516537.1| |
score: 78.6 |
e-value: 1e-13 |
Identity: 42.71% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|67923044|ref|ZP_00516537.1| RNA binding S1 [Crocosphaera watsonii WH 8501] >gi|67855123|gb|EAM50389.1| RNA binding... |
| Match: gi|666973|dbj|BAA05946.1| |
score: 77.8 |
e-value: 2e-13 |
Identity: 39% |
Span: 300bp (52.5%) |
Frame: 2 |
| gi|666973|dbj|BAA05946.1| ribosomal protein S1 [Synechococcus sp.] >gi|1075612|pir||S51485 ribosomal protein S1 - Syn... |
| Match: gi|72383525|ref|YP_292880.1| |
score: 77.8 |
e-value: 2e-13 |
Identity: 33.64% |
Span: 330bp (57.8%) |
Frame: 2 |
| gi|72383525|ref|YP_292880.1| RNA binding S1 [Prochlorococcus marinus str. NATL2A] >gi|72003375|gb|AAZ59177.1| RNA bin... |
| Match: gi|22299589|ref|NP_682836.1| |
score: 77.4 |
e-value: 3e-13 |
Identity: 40.62% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|22299589|ref|NP_682836.1| 30S ribosomal protein S1 [Thermosynechococcus elongatus BP-1] gi|22295773|dbj|BAC09598.1... |
| Match: gi|33239803|ref|NP_874745.1| |
score: 76.6 |
e-value: 5e-13 |
Identity: 34.29% |
Span: 315bp (55.2%) |
Frame: 2 |
| gi|33239803|ref|NP_874745.1| Ribosomal protein S1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237329|... |
| Match: gi|35211550|dbj|BAC88928.1| |
score: 73.2 |
e-value: 6e-12 |
Identity: 39.58% |
Span: 288bp (50.4%) |
Frame: 2 |
| gi|35211550|dbj|BAC88928.1| 30S ribosomal protein S1 [Gloeobacter violaceus PCC 7421] >gi|37520556|ref|NP_923933.1| 3... |
| Match: gi|17130424|dbj|BAB73035.1| |
score: 72 |
e-value: 1e-11 |
Identity: 38.95% |
Span: 282bp (49.4%) |
Frame: 2 |
| gi|17130424|dbj|BAB73035.1| 30S ribosomal protein S1 [Nostoc sp. PCC 7120] >gi|25311777|pir||AC1941 30S ribosomal pro... |
| Match: gi|75909936|ref|YP_324232.1| |
score: 72 |
e-value: 1e-11 |
Identity: 38.95% |
Span: 282bp (49.4%) |
Frame: 2 |
| gi|75909936|ref|YP_324232.1| RNA binding S1 [Anabaena variabilis ATCC 29413] >gi|75703661|gb|ABA23337.1| RNA binding ... |
| Match: gi|23126004|ref|ZP_00107914.1| |
score: 68.2 |
e-value: 2e-10 |
Identity: 36.84% |
Span: 282bp (49.4%) |
Frame: 2 |
| gi|23126004|ref|ZP_00107914.1| COG0539: Ribosomal protein S1 [Nostoc punctiforme] |
| Match: gi|40641370|emb|CAE51165.1| |
score: 65.5 |
e-value: 1e-09 |
Identity: 40.21% |
Span: 291bp (51.0%) |
Frame: 2 |
| gi|40641370|emb|CAE51165.1| ribosomal protein S1 homologue [Chlamydomonas reinhardtii] |
| Match: gi|67922621|ref|ZP_00516127.1| |
score: 63.2 |
e-value: 6e-09 |
Identity: 36.46% |
Span: 285bp (49.9%) |
Frame: 2 |
| gi|67922621|ref|ZP_00516127.1| RNA binding S1 [Crocosphaera watsonii WH 8501] >gi|67855549|gb|EAM50802.1| RNA binding... |
| Match: gi|1276811|gb|AAC08231.1| |
score: 61.2 |
e-value: 2e-08 |
Identity: 36.46% |
Span: 285bp (49.9%) |
Frame: 2 |
| gi|1276811|gb|AAC08231.1| 30S ribosomal protein S1 [Porphyra purpurea] >gi|1710701|sp|P51345|RR1_PORPU Chloroplast 30... |
| Match: gi|90819100|dbj|BAE92469.1| |
score: 60.5 |
e-value: 4e-08 |
Identity: 36.84% |
Span: 282bp (49.4%) |
Frame: 2 |
| 30S |
| Match: gi|110167169|gb|ABG51709.1| |
score: 60.5 |
e-value: 4e-08 |
Identity: 36.46% |
Span: 282bp (49.4%) |
Frame: 2 |
| RNA |
| Match: gi|86605910|ref|YP_474673.1| |
score: 57 |
e-value: 4e-07 |
Identity: 34.41% |
Span: 279bp (48.9%) |
Frame: 2 |
| putative |
| Match: gi|56750057|ref|YP_170758.1| |
score: 56.6 |
e-value: 6e-07 |
Identity: 34.83% |
Span: 267bp (46.8%) |
Frame: 2 |
| gi|56750057|ref|YP_170758.1| nucleic acid binding protein [Synechococcus elongatus PCC 6301] >gi|22002498|gb|AAM82650... |
| Match: gi|86608329|ref|YP_477091.1| |
score: 55.1 |
e-value: 2e-06 |
Identity: 32.26% |
Span: 279bp (48.9%) |
Frame: 2 |
| putative |
| Match: gi|32307552|gb|AAP79181.1| |
score: 55.1 |
e-value: 2e-06 |
Identity: 33.11% |
Span: 414bp (72.5%) |
Frame: 2 |
| gi|32307552|gb|AAP79181.1| ribosomal protein rpS1 [Bigelowiella natans] |
| Match: gi|16330820|ref|NP_441548.1| |
score: 51.2 |
e-value: 2e-05 |
Identity: 31.58% |
Span: 282bp (49.4%) |
Frame: 2 |
| gi|16330820|ref|NP_441548.1| 30S ribosomal protein S1 [Synechocystis sp. PCC 6803] gi|2500386|sp|P74142|RS1B_SYNY3 30... |
| Match: gi|51209897|ref|YP_063561.1| |
score: 50.8 |
e-value: 3e-05 |
Identity: 25.25% |
Span: 297bp (52.0%) |
Frame: 2 |
| gi|51209897|ref|YP_063561.1| 30S ribosomal protein S1 [Gracilaria tenuistipitata var. liui] >gi|50657651|gb|AAT79636.... |
| Match: gi|78196733|gb|ABB34498.1| |
score: 49.3 |
e-value: 9e-05 |
Identity: 29.25% |
Span: 315bp (55.2%) |
Frame: 2 |
| RNA |
| Match: gi|78169498|gb|ABB26595.1| |
score: 48.9 |
e-value: 0.0001 |
Identity: 29.25% |
Span: 315bp (55.2%) |
Frame: 2 |
| RNA |
|
| 13 lower scoring hits censored -- only 46 best hits are stored. |
