| genbank/nr [blastx] | Showing best 34 hits recorded |
| Match: gi|15237393|ref|NP_199431.1| |
score: 95.52 |
e-value: 5.6e-35 |
Identity: 44.12% |
Span: 369bp (64.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 95.52 |
e-value: 5.6e-35 |
Identity: 44.12% |
Span: 369bp (64.1%) |
Frame: 2 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|21553916|gb|AAM62999.1| |
score: 92.43 |
e-value: 4.7e-34 |
Identity: 43.38% |
Span: 369bp (64.1%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15237393|ref|NP_199431.1| |
score: 74.33 |
e-value: 5.6e-35 |
Identity: 65.57% |
Span: 180bp (31.2%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis t... |
| Match: gi|13605589|gb|AAK32788.1| |
score: 74.33 |
e-value: 5.6e-35 |
Identity: 65.57% |
Span: 180bp (31.2%) |
Frame: 1 |
| gi|13605589|gb|AAK32788.1| AT5g46190/MCL19_25 [Arabidopsis thaliana] |
| Match: gi|21553916|gb|AAM62999.1| |
score: 74.33 |
e-value: 4.7e-34 |
Identity: 65.57% |
Span: 180bp (31.2%) |
Frame: 1 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15236863|ref|NP_193572.1| |
score: 62 |
e-value: 2.4e-21 |
Identity: 64.81% |
Span: 162bp (28.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|15236863|ref|NP_193572.1| |
score: 62 |
e-value: 2.4e-21 |
Identity: 56.45% |
Span: 180bp (31.2%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-conta... |
| Match: gi|30684386|ref|NP_849406.1| |
score: 62 |
e-value: 2.4e-21 |
Identity: 64.81% |
Span: 162bp (28.1%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsi... |
| Match: gi|30684386|ref|NP_849406.1| |
score: 62 |
e-value: 2.4e-21 |
Identity: 56.45% |
Span: 180bp (31.2%) |
Frame: 1 |
| KH domain-containing protein [Arabidopsis thaliana] >gi24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsi... |
| Match: gi|7486302|pir||T04533 |
score: 62 |
e-value: 1.7e-18 |
Identity: 64.81% |
Span: 162bp (28.1%) |
Frame: 2 |
| hypothetical protein F28J12.30 - Arabidopsis thaliana >gi2832642|emb|CAA16717.1| putative protein [Arabidopsis thalia... |
| Match: gi|22328051|ref|NP_201244.2| |
score: 53.14 |
e-value: 3.1e-06 |
Identity: 45% |
Span: 237bp (41.1%) |
Frame: 2 |
| HEN4 (HUA ENHANCER 4); RNA binding / nucleic acid binding [Arabidopsis thaliana] |
| Match: gi|7486302|pir||T04533 |
score: 52.37 |
e-value: 1.7e-18 |
Identity: 46.05% |
Span: 180bp (31.2%) |
Frame: 1 |
| hypothetical protein F28J12.30 - Arabidopsis thaliana >gi2832642|emb|CAA16717.1| putative protein [Arabidopsis thalia... |
| Match: gi|28261403|gb|AAO37828.1| |
score: 50.06 |
e-value: 2.6e-05 |
Identity: 43.75% |
Span: 237bp (41.1%) |
Frame: 2 |
| HEN4 [Arabidopsis thaliana] |
| Match: gi|28261405|gb|AAO37829.1| |
score: 50.06 |
e-value: 2.6e-05 |
Identity: 43.75% |
Span: 237bp (41.1%) |
Frame: 2 |
| HEN4 isoform 2 [Arabidopsis thaliana] |
| Match: gi|30685269|ref|NP_851040.1| |
score: 49.68 |
e-value: 3.4e-05 |
Identity: 53.42% |
Span: 216bp (37.5%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|37535668|ref|NP_922136.1| |
score: 46.59 |
e-value: 0.00029 |
Identity: 40.48% |
Span: 249bp (43.2%) |
Frame: 2 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|30696273|ref|NP_200118.3| |
score: 46.21 |
e-value: 0.00038 |
Identity: 32.84% |
Span: 198bp (34.4%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis ... |
| Match: gi|8809595|dbj|BAA97146.1| |
score: 46.21 |
e-value: 0.00038 |
Identity: 32.84% |
Span: 198bp (34.4%) |
Frame: 2 |
| RNA-binding protein-like [Arabidopsis thaliana] |
| Match: gi|18921324|gb|AAL82529.1| |
score: 46.21 |
e-value: 0.00038 |
Identity: 49.35% |
Span: 228bp (39.6%) |
Frame: 2 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|18921324|gb|AAL82529.1| |
score: 43.9 |
e-value: 4.9e-07 |
Identity: 46% |
Span: 147bp (25.5%) |
Frame: 2 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
| Match: gi|11357886|pir||T49962 |
score: 43.9 |
e-value: 0.002 |
Identity: 45.45% |
Span: 228bp (39.6%) |
Frame: 2 |
| gi|11357886|pir||T49962 hypothetical protein F8M21.160 - Arabidopsis thaliana gi|7671496|emb|CAB89337.1| putative pro... |
| Match: gi|30685269|ref|NP_851040.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 45.45% |
Span: 228bp (39.6%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30685276|ref|NP_197031.3| KH domain-containing protein [Arabid... |
| Match: gi|37535668|ref|NP_922136.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 50.77% |
Span: 192bp (33.3%) |
Frame: 2 |
| gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|22128716|gb|AAM... |
| Match: gi|25518414|pir||C86275 |
score: 42.36 |
e-value: 0.005 |
Identity: 40% |
Span: 270bp (46.9%) |
Frame: 2 |
| gi|25518414|pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana gi|5080792|gb|AAD39302.1| Unknown prot... |
| Match: gi|30683629|ref|NP_172869.2| |
score: 42.36 |
e-value: 0.005 |
Identity: 40% |
Span: 270bp (46.9%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana] >gi|1... |
| Match: gi|22326692|ref|NP_196518.2| |
score: 41.59 |
e-value: 0.009 |
Identity: 37.74% |
Span: 156bp (27.1%) |
Frame: 2 |
| gi|22326692|ref|NP_196518.2| KH domain protein [Arabidopsis thaliana] |
| Match: gi|11357508|pir||T49942 |
score: 41.59 |
e-value: 0.009 |
Identity: 37.74% |
Span: 156bp (27.1%) |
Frame: 2 |
| gi|11357508|pir||T49942 hypothetical protein F17I14.250 - Arabidopsis thaliana gi|7671433|emb|CAB89374.1| putative pr... |
| Match: gi|15217969|ref|NP_175569.1| |
score: 41.2 |
e-value: 0.012 |
Identity: 36.21% |
Span: 171bp (29.7%) |
Frame: 2 |
| KH domain-containing protein [Arabidopsis thaliana] >gi12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabi... |
| Match: gi|34904418|ref|NP_913556.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 32.81% |
Span: 189bp (32.8%) |
Frame: 2 |
| gi|34904418|ref|NP_913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|7339705|dbj|BAA92910... |
| Match: gi|28261405|gb|AAO37829.1| |
score: 38.51 |
e-value: 0.079 |
Identity: 40.82% |
Span: 147bp (25.5%) |
Frame: 2 |
| HEN4 isoform 2 [Arabidopsis thaliana] |
| Match: gi|28261403|gb|AAO37828.1| |
score: 38.51 |
e-value: 0.079 |
Identity: 40.82% |
Span: 147bp (25.5%) |
Frame: 2 |
| HEN4 [Arabidopsis thaliana] |
| Match: gi|22328051|ref|NP_201244.2| |
score: 38.51 |
e-value: 0.079 |
Identity: 40.82% |
Span: 147bp (25.5%) |
Frame: 2 |
| HEN4 (HUA ENHANCER 4); RNA binding / nucleic acid binding [Arabidopsis thaliana] |
| Match: gi|18921324|gb|AAL82529.1| |
score: 31.57 |
e-value: 4.9e-07 |
Identity: 35.09% |
Span: 171bp (29.7%) |
Frame: 1 |
| gi|18921324|gb|AAL82529.1| putative nucleic acid binding protein [Oryza sativa] |
|
| arabidopsis/peptide [blastx] | Showing best 16 hits recorded |
| Match: At5g46190.1 |
score: 95.52 |
e-value: 2.1e-36 |
Identity: 44.12% |
Span: 369bp (64.1%) |
Frame: 2 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At5g46190.1 |
score: 74.33 |
e-value: 2.1e-36 |
Identity: 65.57% |
Span: 180bp (31.2%) |
Frame: 1 |
| At5g46190.1 68412.m05122 KH domain protein strong similarity to unknown protein (pir||T04533) |
| Match: At4g18375.2 |
score: 62 |
e-value: 8.9e-23 |
Identity: 64.81% |
Span: 162bp (28.1%) |
Frame: 2 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.2 |
score: 62 |
e-value: 8.9e-23 |
Identity: 56.45% |
Span: 180bp (31.2%) |
Frame: 1 |
| At4g18375.2 68411.m02488 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.1 |
score: 62 |
e-value: 8.9e-23 |
Identity: 64.81% |
Span: 162bp (28.1%) |
Frame: 2 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At4g18375.1 |
score: 62 |
e-value: 8.9e-23 |
Identity: 56.45% |
Span: 180bp (31.2%) |
Frame: 1 |
| At4g18375.1 68411.m02487 KH domain protein contains similarity to RNA-binding KH-domains PF:00013 |
| Match: At5g64390.1 |
score: 53.14 |
e-value: 1.1e-07 |
Identity: 45% |
Span: 237bp (41.1%) |
Frame: 2 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
| Match: At5g15270.2 |
score: 49.68 |
e-value: 1.3e-06 |
Identity: 53.42% |
Span: 216bp (37.5%) |
Frame: 2 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.1 |
score: 49.68 |
e-value: 1.3e-06 |
Identity: 53.42% |
Span: 216bp (37.5%) |
Frame: 2 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g53060.1 |
score: 46.21 |
e-value: 1.4e-05 |
Identity: 32.84% |
Span: 198bp (34.4%) |
Frame: 2 |
| At5g53060.1 68412.m05959 KH domain protein |
| Match: At5g15270.1 |
score: 43.9 |
e-value: 7e-05 |
Identity: 45.45% |
Span: 228bp (39.6%) |
Frame: 2 |
| At5g15270.1 68412.m07802 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At5g15270.2 |
score: 43.9 |
e-value: 7e-05 |
Identity: 45.45% |
Span: 228bp (39.6%) |
Frame: 2 |
| At5g15270.2 68412.m07803 KH domain protein various predicted proteins, Arabidopsis thaliana and Oryza sativa |
| Match: At1g14170.1 |
score: 42.36 |
e-value: 0.0002 |
Identity: 40% |
Span: 270bp (46.9%) |
Frame: 2 |
| At1g14170.1 68408.m01516 KH domain protein location of EST 219C14T7 , gb|N38506 |
| Match: At5g09560.1 |
score: 41.59 |
e-value: 0.00035 |
Identity: 37.74% |
Span: 156bp (27.1%) |
Frame: 2 |
| At5g09560.1 68412.m01023 KH domain protein various predicted RNA binding proteins, Arabidopsis thaliana |
| Match: At1g51580.1 |
score: 41.2 |
e-value: 0.00045 |
Identity: 36.21% |
Span: 171bp (29.7%) |
Frame: 2 |
| At1g51580.1 68408.m05330 KH domain protein |
| Match: At5g64390.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 40.82% |
Span: 147bp (25.5%) |
Frame: 2 |
| At5g64390.1 68412.m07317 KH domain protein contains similarity to RNA-binding protein |
|
